FF:10826-111C7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005508 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX007857;DRR008729;DRZ000154;DRZ001539;DRZ011504;DRZ012889 | ||
| | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:1036,DOID:8692 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0102580,FF:0101035,FF:0100740,FF:0100664 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0101035 | |fonse_cell_line=FF:0101035 | ||
|fonse_cell_line_closure=FF:0101035 | |fonse_cell_line_closure=FF:0101035 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep3.CNhs12336.10826-111C7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep3.CNhs12336.10826-111C7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep3.CNhs12336.10826-111C7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep3.CNhs12336.10826-111C7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep3.CNhs12336.10826-111C7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10826-111C7 | |id=FF:10826-111C7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0100664 | ||
|is_obsolete= | |||
|library_id=CNhs12336 | |||
|library_id_phase_based=2:CNhs12336 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10826 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10826 | |||
|name=chronic myelogenous leukemia cell line:K562 ENCODE, biol_rep3 | |name=chronic myelogenous leukemia cell line:K562 ENCODE, biol_rep3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12336,LSID913,release011,COMPLETED | |profile_hcage=CNhs12336,LSID913,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.0929415312401016,0.369693076997532,-0.27483329820609,0.500112976583065,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0.125092969340625,0,0,0.452838697179144,0,0,0,0,0,0,0,0,0,0,0,0,-0.229407434210258,0.0191544236072303,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0585165486518721,0.0673764988462845,0.0286980877036171,0,0,-0.0299671283668125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673764988462845,0,0,0,0,0,0,0.251268571158254,0,0,-0.0549122296418657,-0.297954029338716,0.168704780473732,0,0,0.0184906635061075,-0.0788937936105745,0,0,0,0,0.0276550977085158,0.245724404013285,0,0,0,0,0,0,0,0,0,0,0.223050865608682,0,0,0,0,0,0,0.0696182645859757,0.177093253311778,0,0,-0.125849468211439,-0.397965492939868,0,0,0.0637641327343414,0,0,0.0673764988462845 | |||
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| |||
|rna_box=111 | |rna_box=111 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=69.987 | |rna_weight_ug=69.987 | ||
|sample_age=53 | |sample_age=53 | ||
|sample_category=cell lines | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line=K562 | |sample_cell_line=K562 | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.30909703514672e-311!GO:0043227;membrane-bound organelle;1.8476777011107e-262!GO:0043231;intracellular membrane-bound organelle;2.81741445546375e-262!GO:0043226;organelle;2.81741445546375e-262!GO:0043229;intracellular organelle;1.38988071123952e-261!GO:0044422;organelle part;1.15860843375258e-185!GO:0044446;intracellular organelle part;2.92772634860918e-184!GO:0005737;cytoplasm;8.14996424068603e-175!GO:0005634;nucleus;2.50889288246054e-135!GO:0044237;cellular metabolic process;2.75747774930681e-135!GO:0044238;primary metabolic process;9.67775200977803e-130!GO:0044444;cytoplasmic part;4.10516336811565e-127!GO:0032991;macromolecular complex;1.4022772292133e-121!GO:0043170;macromolecule metabolic process;2.60450587291251e-121!GO:0044428;nuclear part;1.41533096704308e-105!GO:0030529;ribonucleoprotein complex;5.51951047573816e-103!GO:0043233;organelle lumen;1.70208271315318e-100!GO:0031974;membrane-enclosed lumen;1.70208271315318e-100!GO:0003723;RNA binding;2.25903639371677e-94!GO:0005739;mitochondrion;2.16813195331515e-82!GO:0043283;biopolymer metabolic process;4.36195702246865e-77!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.36423028296575e-77!GO:0010467;gene expression;8.48683987009804e-72!GO:0006396;RNA processing;3.489375840902e-68!GO:0031981;nuclear lumen;4.1774795017964e-64!GO:0006412;translation;7.48395035210182e-62!GO:0043234;protein complex;7.76462526872387e-61!GO:0005840;ribosome;1.54909481807553e-58!GO:0044429;mitochondrial part;1.67357441081776e-57!GO:0006259;DNA metabolic process;5.63365009795313e-57!GO:0005515;protein binding;1.5532550171274e-56!GO:0003676;nucleic acid binding;8.09712500038192e-56!GO:0031967;organelle envelope;3.68246872513149e-53!GO:0031975;envelope;9.78281249766123e-53!GO:0009058;biosynthetic process;3.72459739256321e-52!GO:0016071;mRNA metabolic process;2.93189904247885e-51!GO:0003735;structural constituent of ribosome;3.22673887514615e-51!GO:0031090;organelle membrane;2.30120750905245e-50!GO:0044249;cellular biosynthetic process;1.64181001030262e-49!GO:0019538;protein metabolic process;2.13687785296638e-49!GO:0009059;macromolecule biosynthetic process;8.63768018562305e-48!GO:0008380;RNA splicing;5.15311337280871e-46!GO:0006397;mRNA processing;7.3150976959593e-46!GO:0044267;cellular protein metabolic process;1.5809621188341e-44!GO:0043228;non-membrane-bound organelle;1.62272607021009e-44!GO:0043232;intracellular non-membrane-bound organelle;1.62272607021009e-44!GO:0044260;cellular macromolecule metabolic process;7.63094373244974e-44!GO:0033279;ribosomal subunit;7.69600040061856e-44!GO:0016043;cellular component organization and biogenesis;2.83446122642791e-42!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.39467688775564e-42!GO:0006996;organelle organization and biogenesis;6.79365667874935e-42!GO:0033036;macromolecule localization;9.33850676918737e-42!GO:0015031;protein transport;1.03261443082643e-39!GO:0005654;nucleoplasm;1.49724634502033e-39!GO:0005829;cytosol;7.18835551222456e-39!GO:0016070;RNA metabolic process;9.76237934301069e-39!GO:0065003;macromolecular complex assembly;2.42947429989317e-38!GO:0007049;cell cycle;4.43999175432593e-38!GO:0008104;protein localization;9.14860358426717e-37!GO:0045184;establishment of protein localization;1.71499900333661e-36!GO:0005740;mitochondrial envelope;3.41192271409423e-36!GO:0019866;organelle inner membrane;1.17119505205262e-34!GO:0046907;intracellular transport;2.27746367594096e-34!GO:0000166;nucleotide binding;6.440791373357e-34!GO:0022607;cellular component assembly;1.34722392788258e-33!GO:0031966;mitochondrial membrane;2.73696354453898e-33!GO:0005681;spliceosome;4.1886892637134e-33!GO:0005743;mitochondrial inner membrane;9.32306585481494e-32!GO:0044451;nucleoplasm part;5.71900737108991e-31!GO:0006974;response to DNA damage stimulus;8.02997392125846e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.02478869060748e-30!GO:0044445;cytosolic part;2.15864570890008e-30!GO:0006281;DNA repair;7.04802224424901e-29!GO:0006886;intracellular protein transport;7.21143148434904e-29!GO:0005694;chromosome;8.43472186582659e-29!GO:0000278;mitotic cell cycle;3.93793617816161e-28!GO:0022402;cell cycle process;7.14712621009281e-28!GO:0051276;chromosome organization and biogenesis;5.13922253038037e-27!GO:0031980;mitochondrial lumen;1.40603138472886e-25!GO:0005759;mitochondrial matrix;1.40603138472886e-25!GO:0016462;pyrophosphatase activity;1.80050784476531e-25!GO:0017111;nucleoside-triphosphatase activity;1.92142460212615e-25!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.01864750252573e-25!GO:0016817;hydrolase activity, acting on acid anhydrides;2.84979796145265e-25!GO:0006260;DNA replication;2.96359763874326e-25!GO:0044427;chromosomal part;3.48089102733613e-25!GO:0005730;nucleolus;6.10080699007351e-25!GO:0044455;mitochondrial membrane part;2.16913155831835e-24!GO:0022403;cell cycle phase;2.29923669048991e-24!GO:0006119;oxidative phosphorylation;5.82995548474704e-24!GO:0051649;establishment of cellular localization;6.79050269389764e-24!GO:0016874;ligase activity;9.04091522033686e-24!GO:0051641;cellular localization;2.14584326440998e-23!GO:0000087;M phase of mitotic cell cycle;3.92392478200379e-23!GO:0015934;large ribosomal subunit;4.27645376237007e-23!GO:0032553;ribonucleotide binding;9.16952468584596e-23!GO:0032555;purine ribonucleotide binding;9.16952468584596e-23!GO:0007067;mitosis;1.28444620504319e-22!GO:0017076;purine nucleotide binding;2.46276843568399e-22!GO:0022618;protein-RNA complex assembly;2.46276843568399e-22!GO:0051301;cell division;3.91681609993315e-22!GO:0006457;protein folding;6.08395129961888e-22!GO:0015935;small ribosomal subunit;7.53407887267612e-22!GO:0005524;ATP binding;1.18571928332104e-21!GO:0032559;adenyl ribonucleotide binding;1.42363867535251e-21!GO:0006512;ubiquitin cycle;2.45534083699621e-21!GO:0009719;response to endogenous stimulus;3.10290016778472e-21!GO:0000279;M phase;3.26653046086661e-21!GO:0042254;ribosome biogenesis and assembly;4.40471492796361e-21!GO:0044265;cellular macromolecule catabolic process;6.024390000975e-21!GO:0030554;adenyl nucleotide binding;7.10529342437013e-21!GO:0006325;establishment and/or maintenance of chromatin architecture;1.1900726997611e-19!GO:0012505;endomembrane system;1.70743897306247e-19!GO:0008135;translation factor activity, nucleic acid binding;3.51999135278988e-19!GO:0006323;DNA packaging;5.41824803257789e-19!GO:0016887;ATPase activity;1.3645304027928e-18!GO:0009057;macromolecule catabolic process;2.04475804661199e-18!GO:0043285;biopolymer catabolic process;4.32063914255607e-18!GO:0051186;cofactor metabolic process;5.03936075717707e-18!GO:0005746;mitochondrial respiratory chain;7.00547520453224e-18!GO:0005635;nuclear envelope;7.32504646211259e-18!GO:0042623;ATPase activity, coupled;7.77519596398493e-18!GO:0044453;nuclear membrane part;8.44285185763939e-18!GO:0005761;mitochondrial ribosome;1.60100743127446e-17!GO:0000313;organellar ribosome;1.60100743127446e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.08037577611496e-17!GO:0006399;tRNA metabolic process;3.10515337337995e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.27381566038879e-17!GO:0006511;ubiquitin-dependent protein catabolic process;3.46553285231067e-17!GO:0019941;modification-dependent protein catabolic process;3.70079303579146e-17!GO:0043632;modification-dependent macromolecule catabolic process;3.70079303579146e-17!GO:0044248;cellular catabolic process;5.96969205897405e-17!GO:0044257;cellular protein catabolic process;7.19572910193972e-17!GO:0000398;nuclear mRNA splicing, via spliceosome;8.16542433244688e-17!GO:0000375;RNA splicing, via transesterification reactions;8.16542433244688e-17!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.16542433244688e-17!GO:0031965;nuclear membrane;1.09257906335899e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.99305309566084e-16!GO:0003954;NADH dehydrogenase activity;2.99305309566084e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.99305309566084e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.93964886220724e-16!GO:0016604;nuclear body;5.93047666813977e-16!GO:0006605;protein targeting;6.87296619422217e-16!GO:0005643;nuclear pore;1.1418860378253e-15!GO:0008134;transcription factor binding;1.70420758038861e-15!GO:0051082;unfolded protein binding;2.44492959432708e-15!GO:0050657;nucleic acid transport;4.00209006947056e-15!GO:0051236;establishment of RNA localization;4.00209006947056e-15!GO:0050658;RNA transport;4.00209006947056e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.35318463261483e-15!GO:0003743;translation initiation factor activity;4.85254031454984e-15!GO:0006403;RNA localization;6.11068946140315e-15!GO:0004386;helicase activity;6.67860900980162e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.05546429137778e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.12952550015831e-14!GO:0042773;ATP synthesis coupled electron transport;1.12952550015831e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.27210633121421e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.99361171972157e-14!GO:0045271;respiratory chain complex I;1.99361171972157e-14!GO:0005747;mitochondrial respiratory chain complex I;1.99361171972157e-14!GO:0006732;coenzyme metabolic process;2.40831773613011e-14!GO:0048770;pigment granule;3.90197501599365e-14!GO:0042470;melanosome;3.90197501599365e-14!GO:0016568;chromatin modification;4.2885934737978e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.68544423960287e-14!GO:0030163;protein catabolic process;6.46629202071255e-14!GO:0006413;translational initiation;1.10596144804901e-13!GO:0006364;rRNA processing;1.62993990129545e-13!GO:0065002;intracellular protein transport across a membrane;2.37923222939508e-13!GO:0043412;biopolymer modification;2.39112000459404e-13!GO:0046930;pore complex;2.56970924518603e-13!GO:0016072;rRNA metabolic process;2.60181223431758e-13!GO:0006261;DNA-dependent DNA replication;3.55925848996579e-13!GO:0051028;mRNA transport;3.6511025284685e-13!GO:0008026;ATP-dependent helicase activity;3.69702188263226e-13!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.15347320912705e-13!GO:0006913;nucleocytoplasmic transport;6.32832243018319e-13!GO:0051169;nuclear transport;1.58647702240607e-12!GO:0005783;endoplasmic reticulum;2.20075905913824e-12!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.86212794376705e-12!GO:0004812;aminoacyl-tRNA ligase activity;2.86212794376705e-12!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.86212794376705e-12!GO:0016607;nuclear speck;3.17286642877313e-12!GO:0065004;protein-DNA complex assembly;3.39122058051998e-12!GO:0003712;transcription cofactor activity;4.42835748269673e-12!GO:0044432;endoplasmic reticulum part;4.99379430696555e-12!GO:0043038;amino acid activation;5.94980039309946e-12!GO:0006418;tRNA aminoacylation for protein translation;5.94980039309946e-12!GO:0043039;tRNA aminoacylation;5.94980039309946e-12!GO:0051188;cofactor biosynthetic process;7.97185871795282e-12!GO:0006333;chromatin assembly or disassembly;8.73309758786509e-12!GO:0000775;chromosome, pericentric region;1.10509964108837e-11!GO:0006446;regulation of translational initiation;1.17730493392168e-11!GO:0009259;ribonucleotide metabolic process;1.23378313900032e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.24051131209509e-11!GO:0006163;purine nucleotide metabolic process;1.27379791309075e-11!GO:0048193;Golgi vesicle transport;1.90607841757538e-11!GO:0015630;microtubule cytoskeleton;2.8494463236732e-11!GO:0051726;regulation of cell cycle;3.43164049865233e-11!GO:0000785;chromatin;3.49323474718451e-11!GO:0000074;regulation of progression through cell cycle;3.52642193666522e-11!GO:0006164;purine nucleotide biosynthetic process;9.13089528318214e-11!GO:0016740;transferase activity;1.0909356566149e-10!GO:0006464;protein modification process;1.09460988817204e-10!GO:0019222;regulation of metabolic process;1.18195279661007e-10!GO:0009055;electron carrier activity;1.47387294031195e-10!GO:0016779;nucleotidyltransferase activity;1.58260162454698e-10!GO:0009150;purine ribonucleotide metabolic process;2.17619501003208e-10!GO:0009260;ribonucleotide biosynthetic process;2.20854108691934e-10!GO:0003697;single-stranded DNA binding;2.31749650156594e-10!GO:0008565;protein transporter activity;2.85557145716968e-10!GO:0017038;protein import;3.11293791939395e-10!GO:0006366;transcription from RNA polymerase II promoter;3.33098685962164e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.49541266892348e-10!GO:0009056;catabolic process;9.59310040249514e-10!GO:0006461;protein complex assembly;9.59310040249514e-10!GO:0043566;structure-specific DNA binding;1.1452840308385e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.32861666361064e-09!GO:0043687;post-translational protein modification;1.50224389834874e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.5893109696334e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.09430486518686e-09!GO:0009108;coenzyme biosynthetic process;3.99743906504806e-09!GO:0007005;mitochondrion organization and biogenesis;5.87188167590777e-09!GO:0009141;nucleoside triphosphate metabolic process;6.33107483143933e-09!GO:0005794;Golgi apparatus;6.76329598915295e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.45228279086089e-09!GO:0003899;DNA-directed RNA polymerase activity;8.53433545691813e-09!GO:0005819;spindle;8.58167551521167e-09!GO:0005813;centrosome;8.60597803899056e-09!GO:0009199;ribonucleoside triphosphate metabolic process;9.67654044559301e-09!GO:0008639;small protein conjugating enzyme activity;1.16236635600611e-08!GO:0015986;ATP synthesis coupled proton transport;1.20329985763117e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.20329985763117e-08!GO:0031323;regulation of cellular metabolic process;1.28546541526825e-08!GO:0012501;programmed cell death;1.38741727645546e-08!GO:0005789;endoplasmic reticulum membrane;1.51651878535317e-08!GO:0005815;microtubule organizing center;1.91758228256549e-08!GO:0006915;apoptosis;2.05011219140909e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.27622972693438e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.27622972693438e-08!GO:0019787;small conjugating protein ligase activity;2.43692524440989e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.83838858999704e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.83838858999704e-08!GO:0006350;transcription;2.9148116699502e-08!GO:0008094;DNA-dependent ATPase activity;3.42092733513483e-08!GO:0004842;ubiquitin-protein ligase activity;3.42092733513483e-08!GO:0016192;vesicle-mediated transport;3.65476120464046e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.98873501920308e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.94705775068369e-08!GO:0046034;ATP metabolic process;5.06106072082744e-08!GO:0019829;cation-transporting ATPase activity;5.48953357970198e-08!GO:0000075;cell cycle checkpoint;6.24564441291816e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.83868766476099e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.83868766476099e-08!GO:0016741;transferase activity, transferring one-carbon groups;6.85240168442802e-08!GO:0009060;aerobic respiration;7.37174577653616e-08!GO:0008219;cell death;7.51090064158181e-08!GO:0016265;death;7.51090064158181e-08!GO:0000245;spliceosome assembly;8.06211533399666e-08!GO:0008168;methyltransferase activity;8.07227543611356e-08!GO:0050794;regulation of cellular process;8.29146192567885e-08!GO:0051329;interphase of mitotic cell cycle;8.42550403426367e-08!GO:0006334;nucleosome assembly;8.51933869558205e-08!GO:0031497;chromatin assembly;9.15243153188333e-08!GO:0006754;ATP biosynthetic process;1.12488888308717e-07!GO:0006753;nucleoside phosphate metabolic process;1.12488888308717e-07!GO:0005657;replication fork;1.42270124763022e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.45216899474672e-07!GO:0006752;group transfer coenzyme metabolic process;1.56635716769451e-07!GO:0051325;interphase;1.66292425507815e-07!GO:0005667;transcription factor complex;2.12104864749166e-07!GO:0016881;acid-amino acid ligase activity;2.48783074794693e-07!GO:0016787;hydrolase activity;2.65489968001001e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.75259063389425e-07!GO:0045333;cellular respiration;4.79590612673175e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.90101171913471e-07!GO:0051170;nuclear import;5.08521455447649e-07!GO:0045259;proton-transporting ATP synthase complex;5.79428090652055e-07!GO:0010468;regulation of gene expression;6.0351139550914e-07!GO:0006888;ER to Golgi vesicle-mediated transport;6.0351139550914e-07!GO:0008033;tRNA processing;6.35602630063916e-07!GO:0006084;acetyl-CoA metabolic process;6.61733276421304e-07!GO:0006099;tricarboxylic acid cycle;6.83053525390719e-07!GO:0046356;acetyl-CoA catabolic process;6.83053525390719e-07!GO:0009117;nucleotide metabolic process;7.19052432083606e-07!GO:0006302;double-strand break repair;8.73611938468373e-07!GO:0003713;transcription coactivator activity;8.81441640270789e-07!GO:0005768;endosome;9.40075923276211e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.01343911590734e-06!GO:0003677;DNA binding;1.13934592861494e-06!GO:0043623;cellular protein complex assembly;1.18397811952442e-06!GO:0051246;regulation of protein metabolic process;1.3517510277433e-06!GO:0006606;protein import into nucleus;1.48934079403907e-06!GO:0032446;protein modification by small protein conjugation;1.79768632481324e-06!GO:0048475;coated membrane;1.8152495521731e-06!GO:0030117;membrane coat;1.8152495521731e-06!GO:0003724;RNA helicase activity;1.95282052560052e-06!GO:0032774;RNA biosynthetic process;2.11499347392298e-06!GO:0000776;kinetochore;2.15871918362473e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.19794047789781e-06!GO:0006310;DNA recombination;2.23818167722102e-06!GO:0044452;nucleolar part;2.74402714058024e-06!GO:0007059;chromosome segregation;2.91721904723485e-06!GO:0006351;transcription, DNA-dependent;3.08366891270388e-06!GO:0003684;damaged DNA binding;3.21421735300761e-06!GO:0005793;ER-Golgi intermediate compartment;3.4248018458952e-06!GO:0000151;ubiquitin ligase complex;3.56885951554099e-06!GO:0016563;transcription activator activity;3.56885951554099e-06!GO:0009109;coenzyme catabolic process;3.66798754043917e-06!GO:0016853;isomerase activity;3.75380871062384e-06!GO:0007051;spindle organization and biogenesis;4.03807111605522e-06!GO:0016567;protein ubiquitination;4.23685104632799e-06!GO:0008654;phospholipid biosynthetic process;4.24452497472572e-06!GO:0005762;mitochondrial large ribosomal subunit;4.50148199476676e-06!GO:0000315;organellar large ribosomal subunit;4.50148199476676e-06!GO:0006352;transcription initiation;5.1469470431989e-06!GO:0051168;nuclear export;7.63004168416072e-06!GO:0004527;exonuclease activity;8.32308028584412e-06!GO:0030120;vesicle coat;9.0226304513703e-06!GO:0030662;coated vesicle membrane;9.0226304513703e-06!GO:0000314;organellar small ribosomal subunit;9.0226304513703e-06!GO:0005763;mitochondrial small ribosomal subunit;9.0226304513703e-06!GO:0003682;chromatin binding;9.47188889102586e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.82055435423746e-06!GO:0016491;oxidoreductase activity;1.05365007860263e-05!GO:0003678;DNA helicase activity;1.10527042254138e-05!GO:0016363;nuclear matrix;1.16247595788022e-05!GO:0006613;cotranslational protein targeting to membrane;1.26961228293195e-05!GO:0051052;regulation of DNA metabolic process;1.40788975887896e-05!GO:0016310;phosphorylation;1.48078925521964e-05!GO:0043067;regulation of programmed cell death;1.52860208417513e-05!GO:0042981;regulation of apoptosis;1.53499467555902e-05!GO:0051187;cofactor catabolic process;1.77341818320703e-05!GO:0006839;mitochondrial transport;1.7798629870221e-05!GO:0006383;transcription from RNA polymerase III promoter;1.85636732995585e-05!GO:0043021;ribonucleoprotein binding;1.91189016030116e-05!GO:0051427;hormone receptor binding;2.12666169833487e-05!GO:0032508;DNA duplex unwinding;2.4801037115959e-05!GO:0032392;DNA geometric change;2.4801037115959e-05!GO:0006414;translational elongation;2.60284831085362e-05!GO:0007093;mitotic cell cycle checkpoint;2.60284831085362e-05!GO:0006401;RNA catabolic process;3.80822011384846e-05!GO:0030880;RNA polymerase complex;3.82015410755121e-05!GO:0005798;Golgi-associated vesicle;3.94720247601306e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;4.08677592067626e-05!GO:0044440;endosomal part;4.12301180726739e-05!GO:0010008;endosome membrane;4.12301180726739e-05!GO:0006793;phosphorus metabolic process;4.32793917802063e-05!GO:0006796;phosphate metabolic process;4.32793917802063e-05!GO:0005788;endoplasmic reticulum lumen;4.32793917802063e-05!GO:0006091;generation of precursor metabolites and energy;4.60699130171861e-05!GO:0004518;nuclease activity;4.68975701433422e-05!GO:0035257;nuclear hormone receptor binding;4.71312441041375e-05!GO:0000049;tRNA binding;5.03272300788826e-05!GO:0005839;proteasome core complex (sensu Eukaryota);5.15452717461024e-05!GO:0019752;carboxylic acid metabolic process;5.4541997574014e-05!GO:0006268;DNA unwinding during replication;6.33037255872115e-05!GO:0006082;organic acid metabolic process;6.56976305448862e-05!GO:0006626;protein targeting to mitochondrion;6.57726477453087e-05!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;7.09071496815208e-05!GO:0031988;membrane-bound vesicle;7.13761382103358e-05!GO:0003714;transcription corepressor activity;7.17411452656787e-05!GO:0045449;regulation of transcription;7.19813017097863e-05!GO:0006402;mRNA catabolic process;7.35961510610121e-05!GO:0009165;nucleotide biosynthetic process;7.38593043187276e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.419486211885e-05!GO:0015399;primary active transmembrane transporter activity;7.419486211885e-05!GO:0007088;regulation of mitosis;7.71789662103686e-05!GO:0003690;double-stranded DNA binding;7.74467900495031e-05!GO:0006270;DNA replication initiation;8.50807972724305e-05!GO:0044431;Golgi apparatus part;8.60590843424464e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.89352494623905e-05!GO:0003729;mRNA binding;9.0115231657066e-05!GO:0050789;regulation of biological process;9.20230621201192e-05!GO:0055029;nuclear DNA-directed RNA polymerase complex;9.31078258008588e-05!GO:0000428;DNA-directed RNA polymerase complex;9.31078258008588e-05!GO:0003924;GTPase activity;9.50294938044091e-05!GO:0006338;chromatin remodeling;9.60899536954305e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;9.61543053434556e-05!GO:0043681;protein import into mitochondrion;0.000108300498034253!GO:0016859;cis-trans isomerase activity;0.000111242570312247!GO:0008186;RNA-dependent ATPase activity;0.000123334263058228!GO:0016564;transcription repressor activity;0.000126032153219645!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00012896880157638!GO:0016023;cytoplasmic membrane-bound vesicle;0.000151789591392167!GO:0006520;amino acid metabolic process;0.000154219459440974!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000159619570907614!GO:0005874;microtubule;0.000160975303929345!GO:0016251;general RNA polymerase II transcription factor activity;0.000176497878046146!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000180180462386201!GO:0022890;inorganic cation transmembrane transporter activity;0.000182131661904178!GO:0000059;protein import into nucleus, docking;0.000182131661904178!GO:0004298;threonine endopeptidase activity;0.000185856240358185!GO:0031072;heat shock protein binding;0.00018777359113464!GO:0046483;heterocycle metabolic process;0.000188298188535564!GO:0046467;membrane lipid biosynthetic process;0.00020643261125491!GO:0005770;late endosome;0.000234425395713725!GO:0007052;mitotic spindle organization and biogenesis;0.000235055833183082!GO:0015992;proton transport;0.000266065322507866!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000283274922976924!GO:0006405;RNA export from nucleus;0.000283274922976924!GO:0015631;tubulin binding;0.000288036042783591!GO:0045454;cell redox homeostasis;0.000299898889644061!GO:0005758;mitochondrial intermembrane space;0.000304943764635632!GO:0006818;hydrogen transport;0.000315967160303874!GO:0006612;protein targeting to membrane;0.000349624555802285!GO:0004004;ATP-dependent RNA helicase activity;0.000351316704308605!GO:0046474;glycerophospholipid biosynthetic process;0.000354678780145594!GO:0005669;transcription factor TFIID complex;0.000392335928975623!GO:0031982;vesicle;0.000393176513257539!GO:0019899;enzyme binding;0.000393272395753991!GO:0007017;microtubule-based process;0.000429378511172928!GO:0006355;regulation of transcription, DNA-dependent;0.00044845858257125!GO:0005684;U2-dependent spliceosome;0.000462936442707167!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000510183383666363!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000521820903457693!GO:0046489;phosphoinositide biosynthetic process;0.000538416822494581!GO:0006275;regulation of DNA replication;0.000546261679598155!GO:0031970;organelle envelope lumen;0.000559389427340542!GO:0005637;nuclear inner membrane;0.00057702395279406!GO:0009451;RNA modification;0.000597859604050124!GO:0008610;lipid biosynthetic process;0.000617388189542006!GO:0000922;spindle pole;0.000647214328117297!GO:0043284;biopolymer biosynthetic process;0.000653747137543054!GO:0032200;telomere organization and biogenesis;0.000682754278202386!GO:0000723;telomere maintenance;0.000682754278202386!GO:0007006;mitochondrial membrane organization and biogenesis;0.000705761438662291!GO:0043492;ATPase activity, coupled to movement of substances;0.000765429183178613!GO:0030867;rough endoplasmic reticulum membrane;0.000765690983747507!GO:0051252;regulation of RNA metabolic process;0.00076732932590502!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000781195358383502!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000796261145926123!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000796261145926123!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000796261145926123!GO:0006007;glucose catabolic process;0.000796261145926123!GO:0000139;Golgi membrane;0.000879396625192877!GO:0000786;nucleosome;0.00089825251443439!GO:0005048;signal sequence binding;0.000906524687775703!GO:0051789;response to protein stimulus;0.000911688392133997!GO:0006986;response to unfolded protein;0.000911688392133997!GO:0031968;organelle outer membrane;0.000918062063077133!GO:0003711;transcription elongation regulator activity;0.000942162429017681!GO:0031410;cytoplasmic vesicle;0.000945161401033709!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0009820950279257!GO:0008250;oligosaccharyl transferase complex;0.000985277075829001!GO:0019867;outer membrane;0.00100934802381533!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00103756379842908!GO:0005525;GTP binding;0.00104006145734309!GO:0005885;Arp2/3 protein complex;0.00104212862494634!GO:0000819;sister chromatid segregation;0.00108293188003468!GO:0042393;histone binding;0.00108521003778728!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0010952119567893!GO:0030384;phosphoinositide metabolic process;0.00111003470216665!GO:0008276;protein methyltransferase activity;0.00111003470216665!GO:0031324;negative regulation of cellular metabolic process;0.00113783440541206!GO:0004576;oligosaccharyl transferase activity;0.00119163282337154!GO:0051539;4 iron, 4 sulfur cluster binding;0.00119163282337154!GO:0006144;purine base metabolic process;0.00126758602760709!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00126891587625637!GO:0000096;sulfur amino acid metabolic process;0.00130332993512333!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00130332993512333!GO:0051920;peroxiredoxin activity;0.00130979926919993!GO:0043069;negative regulation of programmed cell death;0.00137571586066162!GO:0048500;signal recognition particle;0.00138546957130294!GO:0043596;nuclear replication fork;0.00142039337342856!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00144883913534653!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00144883913534653!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00148642328588326!GO:0005741;mitochondrial outer membrane;0.00148833743712196!GO:0009892;negative regulation of metabolic process;0.00155999697141927!GO:0051540;metal cluster binding;0.0015977915420709!GO:0051536;iron-sulfur cluster binding;0.0015977915420709!GO:0006284;base-excision repair;0.00162599123839562!GO:0031570;DNA integrity checkpoint;0.00170705754651463!GO:0000070;mitotic sister chromatid segregation;0.00170991915747106!GO:0016272;prefoldin complex;0.00173174854510064!GO:0015980;energy derivation by oxidation of organic compounds;0.00180808968270364!GO:0006611;protein export from nucleus;0.00184096747311735!GO:0043066;negative regulation of apoptosis;0.00188225561086641!GO:0005791;rough endoplasmic reticulum;0.00189918893293444!GO:0005769;early endosome;0.00195452236658532!GO:0051087;chaperone binding;0.00198973860545939!GO:0000725;recombinational repair;0.00218185363909733!GO:0000724;double-strand break repair via homologous recombination;0.00218185363909733!GO:0035258;steroid hormone receptor binding;0.0021840365622452!GO:0050662;coenzyme binding;0.00224634102584979!GO:0004003;ATP-dependent DNA helicase activity;0.00226377844949885!GO:0006650;glycerophospholipid metabolic process;0.0023165184648228!GO:0008312;7S RNA binding;0.00232769840587441!GO:0006519;amino acid and derivative metabolic process;0.00233109209058764!GO:0047485;protein N-terminus binding;0.00233737995614211!GO:0016126;sterol biosynthetic process;0.00236719389778793!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00245856093608644!GO:0031124;mRNA 3'-end processing;0.0025181783230631!GO:0008408;3'-5' exonuclease activity;0.00256002566879399!GO:0000228;nuclear chromosome;0.00265127629483251!GO:0006950;response to stress;0.00272535308607745!GO:0032259;methylation;0.00294923887046835!GO:0005876;spindle microtubule;0.00297595575368033!GO:0006916;anti-apoptosis;0.00300496539438024!GO:0000781;chromosome, telomeric region;0.00313250877993092!GO:0000082;G1/S transition of mitotic cell cycle;0.00319308141881047!GO:0045786;negative regulation of progression through cell cycle;0.00329278418930839!GO:0000178;exosome (RNase complex);0.0033682719150334!GO:0006779;porphyrin biosynthetic process;0.00341526970805497!GO:0033014;tetrapyrrole biosynthetic process;0.00341526970805497!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00349731165651263!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00350754586080728!GO:0045047;protein targeting to ER;0.00350754586080728!GO:0030133;transport vesicle;0.00361584332652506!GO:0008017;microtubule binding;0.00365045108703066!GO:0019843;rRNA binding;0.00366825361683645!GO:0006289;nucleotide-excision repair;0.00386937641547327!GO:0009112;nucleobase metabolic process;0.00388599497104389!GO:0009124;nucleoside monophosphate biosynthetic process;0.00393227673998488!GO:0009123;nucleoside monophosphate metabolic process;0.00393227673998488!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00393227673998488!GO:0006417;regulation of translation;0.00403749090353796!GO:0000152;nuclear ubiquitin ligase complex;0.00413483712358113!GO:0043624;cellular protein complex disassembly;0.00425271325103033!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00430806401413865!GO:0030134;ER to Golgi transport vesicle;0.00431954094031654!GO:0043601;nuclear replisome;0.00432100421708184!GO:0030894;replisome;0.00432100421708184!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00443482006239041!GO:0030658;transport vesicle membrane;0.00452971113035524!GO:0006891;intra-Golgi vesicle-mediated transport;0.00460098540138735!GO:0048471;perinuclear region of cytoplasm;0.00460098540138735!GO:0018196;peptidyl-asparagine modification;0.00469934281713808!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00469934281713808!GO:0016584;nucleosome positioning;0.00489672547632052!GO:0006595;polyamine metabolic process;0.00504289015887148!GO:0008652;amino acid biosynthetic process;0.0050778151907221!GO:0030663;COPI coated vesicle membrane;0.00539886049309213!GO:0030126;COPI vesicle coat;0.00539886049309213!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00543562563779784!GO:0019783;small conjugating protein-specific protease activity;0.00551613719955412!GO:0048037;cofactor binding;0.0055747726412665!GO:0000339;RNA cap binding;0.00558376693531094!GO:0046914;transition metal ion binding;0.00567981927682425!GO:0043488;regulation of mRNA stability;0.00573035616572969!GO:0043487;regulation of RNA stability;0.00573035616572969!GO:0043022;ribosome binding;0.00573170136228572!GO:0031123;RNA 3'-end processing;0.0059168058162434!GO:0048487;beta-tubulin binding;0.00598547075606157!GO:0046365;monosaccharide catabolic process;0.00611805669201651!GO:0008022;protein C-terminus binding;0.00612665887814062!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00616696910077967!GO:0051053;negative regulation of DNA metabolic process;0.00616696910077967!GO:0030118;clathrin coat;0.00623835627053511!GO:0030127;COPII vesicle coat;0.00626697348403643!GO:0012507;ER to Golgi transport vesicle membrane;0.00626697348403643!GO:0030518;steroid hormone receptor signaling pathway;0.0064273911570159!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00650296021110389!GO:0004532;exoribonuclease activity;0.00652877751733963!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00652877751733963!GO:0022411;cellular component disassembly;0.00653671195059537!GO:0022406;membrane docking;0.00654986820133174!GO:0048278;vesicle docking;0.00654986820133174!GO:0004674;protein serine/threonine kinase activity;0.00667315146988812!GO:0030521;androgen receptor signaling pathway;0.00673598832298483!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00676262112749863!GO:0006730;one-carbon compound metabolic process;0.00688383528796247!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00692934986312493!GO:0043414;biopolymer methylation;0.00697947313727549!GO:0032561;guanyl ribonucleotide binding;0.00708941858466888!GO:0019001;guanyl nucleotide binding;0.00708941858466888!GO:0004843;ubiquitin-specific protease activity;0.00718197433993602!GO:0006400;tRNA modification;0.00781204238740881!GO:0005832;chaperonin-containing T-complex;0.00789446163435683!GO:0000793;condensed chromosome;0.00790198132325903!GO:0006783;heme biosynthetic process;0.00790292294695893!GO:0032984;macromolecular complex disassembly;0.00792253877847109!GO:0000077;DNA damage checkpoint;0.00793927783568175!GO:0048523;negative regulation of cellular process;0.00805122555585403!GO:0000080;G1 phase of mitotic cell cycle;0.00809047826652336!GO:0030660;Golgi-associated vesicle membrane;0.00811020381756314!GO:0003746;translation elongation factor activity;0.00822969957605372!GO:0006506;GPI anchor biosynthetic process;0.00829319542609689!GO:0006607;NLS-bearing substrate import into nucleus;0.0083277656095138!GO:0046966;thyroid hormone receptor binding;0.00833647824910601!GO:0016407;acetyltransferase activity;0.00836018816705084!GO:0044454;nuclear chromosome part;0.00838103742953752!GO:0006096;glycolysis;0.00838103742953752!GO:0006376;mRNA splice site selection;0.00849791494603023!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00849791494603023!GO:0046164;alcohol catabolic process;0.00852848888842576!GO:0007004;telomere maintenance via telomerase;0.00853769097673231!GO:0006695;cholesterol biosynthetic process;0.00862173646606031!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00866668457744824!GO:0015002;heme-copper terminal oxidase activity;0.00866668457744824!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00866668457744824!GO:0004129;cytochrome-c oxidase activity;0.00866668457744824!GO:0006378;mRNA polyadenylation;0.00868344387472795!GO:0009161;ribonucleoside monophosphate metabolic process;0.00874941859188791!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00874941859188791!GO:0006778;porphyrin metabolic process;0.00904958182381503!GO:0033013;tetrapyrrole metabolic process;0.00904958182381503!GO:0006643;membrane lipid metabolic process;0.00925628981114079!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0092974145878278!GO:0006904;vesicle docking during exocytosis;0.00945904161105792!GO:0000726;non-recombinational repair;0.00945904161105792!GO:0005680;anaphase-promoting complex;0.00964272105545928!GO:0019320;hexose catabolic process;0.00967228116137823!GO:0000910;cytokinesis;0.0102126618506568!GO:0008234;cysteine-type peptidase activity;0.0103433794763691!GO:0044262;cellular carbohydrate metabolic process;0.0104120084232095!GO:0044450;microtubule organizing center part;0.0104863200346664!GO:0031577;spindle checkpoint;0.0106341949849528!GO:0045045;secretory pathway;0.0106588777811986!GO:0042054;histone methyltransferase activity;0.0106948163754327!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0108005807864899!GO:0043241;protein complex disassembly;0.0111018455818221!GO:0008632;apoptotic program;0.011337109678505!GO:0051287;NAD binding;0.0114628861095389!GO:0006406;mRNA export from nucleus;0.0115411853954678!GO:0008139;nuclear localization sequence binding;0.0116251177403978!GO:0000097;sulfur amino acid biosynthetic process;0.011742130308705!GO:0003887;DNA-directed DNA polymerase activity;0.0118399884200349!GO:0016790;thiolester hydrolase activity;0.0119267554708873!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0119464413441462!GO:0004221;ubiquitin thiolesterase activity;0.012125535828915!GO:0000086;G2/M transition of mitotic cell cycle;0.0121716980864902!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0127957039151984!GO:0035267;NuA4 histone acetyltransferase complex;0.012883417106078!GO:0030137;COPI-coated vesicle;0.0130450300320249!GO:0006505;GPI anchor metabolic process;0.0131416831319426!GO:0030218;erythrocyte differentiation;0.0131416831319426!GO:0008270;zinc ion binding;0.0135607568802844!GO:0065007;biological regulation;0.0136283402994054!GO:0043189;H4/H2A histone acetyltransferase complex;0.0138197994635491!GO:0031901;early endosome membrane;0.0138588679527529!GO:0006541;glutamine metabolic process;0.0139259466920061!GO:0015036;disulfide oxidoreductase activity;0.0140873318847688!GO:0000287;magnesium ion binding;0.0140926187027875!GO:0051297;centrosome organization and biogenesis;0.014309061924471!GO:0031023;microtubule organizing center organization and biogenesis;0.014309061924471!GO:0006278;RNA-dependent DNA replication;0.0144102544357693!GO:0005663;DNA replication factor C complex;0.0144973148406286!GO:0009303;rRNA transcription;0.0145383474955108!GO:0030176;integral to endoplasmic reticulum membrane;0.0146574786472584!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0149144170904581!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0149354112589488!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.015022143715701!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0157771334090084!GO:0004523;ribonuclease H activity;0.0163371099352193!GO:0007010;cytoskeleton organization and biogenesis;0.0163593993691405!GO:0006360;transcription from RNA polymerase I promoter;0.0163850887357302!GO:0009067;aspartate family amino acid biosynthetic process;0.0163866593913993!GO:0032039;integrator complex;0.0163866593913993!GO:0030119;AP-type membrane coat adaptor complex;0.0164181524786083!GO:0016481;negative regulation of transcription;0.0168408309363521!GO:0006644;phospholipid metabolic process;0.016884475763603!GO:0007050;cell cycle arrest;0.0170854070466229!GO:0009066;aspartate family amino acid metabolic process;0.0171402071890083!GO:0009116;nucleoside metabolic process;0.0175188792186361!GO:0006118;electron transport;0.0188280925556086!GO:0008287;protein serine/threonine phosphatase complex;0.0188280925556086!GO:0000209;protein polyubiquitination;0.0188536372431631!GO:0001522;pseudouridine synthesis;0.0205598993102739!GO:0017056;structural constituent of nuclear pore;0.0206669742816763!GO:0008170;N-methyltransferase activity;0.0206669742816763!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0210470580515627!GO:0045039;protein import into mitochondrial inner membrane;0.0210470580515627!GO:0009308;amine metabolic process;0.0211080750287646!GO:0005773;vacuole;0.0211080750287646!GO:0040029;regulation of gene expression, epigenetic;0.0212605726887552!GO:0008180;signalosome;0.0214201660495686!GO:0003702;RNA polymerase II transcription factor activity;0.0214301328687161!GO:0042168;heme metabolic process;0.0215508212645266!GO:0007021;tubulin folding;0.0216478090058936!GO:0030145;manganese ion binding;0.0216478090058936!GO:0050681;androgen receptor binding;0.021715899957082!GO:0006733;oxidoreduction coenzyme metabolic process;0.0218602207147834!GO:0005652;nuclear lamina;0.0218602207147834!GO:0008156;negative regulation of DNA replication;0.0223716054979821!GO:0030262;apoptotic nuclear changes;0.0229316364849131!GO:0033116;ER-Golgi intermediate compartment membrane;0.0231309887230341!GO:0006497;protein amino acid lipidation;0.0231545814447497!GO:0030131;clathrin adaptor complex;0.0232137924183635!GO:0030508;thiol-disulfide exchange intermediate activity;0.0232137924183635!GO:0030132;clathrin coat of coated pit;0.0236139793158528!GO:0006301;postreplication repair;0.0237724423107702!GO:0006740;NADPH regeneration;0.0238236029081026!GO:0006098;pentose-phosphate shunt;0.0238236029081026!GO:0051318;G1 phase;0.0240328213710633!GO:0031326;regulation of cellular biosynthetic process;0.0241352743792562!GO:0009081;branched chain family amino acid metabolic process;0.02429567772123!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.024518866081405!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.024518866081405!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0246850607630392!GO:0012506;vesicle membrane;0.0246850607630392!GO:0000118;histone deacetylase complex;0.0246850607630392!GO:0009113;purine base biosynthetic process;0.0248487067416603!GO:0007346;regulation of progression through mitotic cell cycle;0.0248642088465179!GO:0006308;DNA catabolic process;0.0255291530842825!GO:0000175;3'-5'-exoribonuclease activity;0.0255291530842825!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0256997407182372!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0256997407182372!GO:0009126;purine nucleoside monophosphate metabolic process;0.0256997407182372!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0256997407182372!GO:0008536;Ran GTPase binding;0.0266004466419049!GO:0031371;ubiquitin conjugating enzyme complex;0.026983382546209!GO:0016279;protein-lysine N-methyltransferase activity;0.0271571545958772!GO:0018024;histone-lysine N-methyltransferase activity;0.0271571545958772!GO:0016278;lysine N-methyltransferase activity;0.0271571545958772!GO:0046128;purine ribonucleoside metabolic process;0.0274297945968161!GO:0042278;purine nucleoside metabolic process;0.0274297945968161!GO:0000930;gamma-tubulin complex;0.027919359448384!GO:0030433;ER-associated protein catabolic process;0.0281156671908444!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0281156671908444!GO:0008299;isoprenoid biosynthetic process;0.0284709254888301!GO:0042026;protein refolding;0.028805307310961!GO:0030496;midbody;0.028805307310961!GO:0031625;ubiquitin protein ligase binding;0.0290488834389137!GO:0042802;identical protein binding;0.0293238556220123!GO:0031902;late endosome membrane;0.029409384892783!GO:0005996;monosaccharide metabolic process;0.029409384892783!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0297705194139416!GO:0008144;drug binding;0.0299496014480323!GO:0000123;histone acetyltransferase complex;0.0302314776777975!GO:0004520;endodeoxyribonuclease activity;0.0307572766783116!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0311063191309136!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0312234094798142!GO:0016835;carbon-oxygen lyase activity;0.0316465757403932!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.031990929881644!GO:0051656;establishment of organelle localization;0.032236703816239!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0326212203731518!GO:0043631;RNA polyadenylation;0.0331207285273756!GO:0019318;hexose metabolic process;0.0335091520657686!GO:0042770;DNA damage response, signal transduction;0.0335405016767913!GO:0006807;nitrogen compound metabolic process;0.0336475183860823!GO:0005666;DNA-directed RNA polymerase III complex;0.0336475183860823!GO:0046112;nucleobase biosynthetic process;0.0338987583002443!GO:0006415;translational termination;0.0345878479643342!GO:0006220;pyrimidine nucleotide metabolic process;0.0350419998525375!GO:0008097;5S rRNA binding;0.0352701185463479!GO:0006610;ribosomal protein import into nucleus;0.0353271365489337!GO:0030522;intracellular receptor-mediated signaling pathway;0.0354939610372273!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0358532489447961!GO:0010257;NADH dehydrogenase complex assembly;0.0358532489447961!GO:0033108;mitochondrial respiratory chain complex assembly;0.0358532489447961!GO:0030174;regulation of DNA replication initiation;0.0362145374933242!GO:0000119;mediator complex;0.0363175007734637!GO:0030659;cytoplasmic vesicle membrane;0.0363175007734637!GO:0031057;negative regulation of histone modification;0.0367759397239087!GO:0035067;negative regulation of histone acetylation;0.0367759397239087!GO:0042158;lipoprotein biosynthetic process;0.0370750885207143!GO:0007098;centrosome cycle;0.0370750885207143!GO:0044438;microbody part;0.0370750885207143!GO:0044439;peroxisomal part;0.0370750885207143!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.037706637295387!GO:0005487;nucleocytoplasmic transporter activity;0.037706637295387!GO:0000305;response to oxygen radical;0.0382153971507534!GO:0008320;protein transmembrane transporter activity;0.038444777254674!GO:0005784;translocon complex;0.0385381098590621!GO:0016408;C-acyltransferase activity;0.0385863196222511!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0385924807997223!GO:0003756;protein disulfide isomerase activity;0.0386487176646871!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0386487176646871!GO:0000792;heterochromatin;0.0386576603317182!GO:0006767;water-soluble vitamin metabolic process;0.0390744113024093!GO:0003725;double-stranded RNA binding;0.0396687310030792!GO:0048519;negative regulation of biological process;0.040291782280623!GO:0016453;C-acetyltransferase activity;0.040339775957923!GO:0044448;cell cortex part;0.0416919347286743!GO:0006596;polyamine biosynthetic process;0.0418389739672742!GO:0005732;small nucleolar ribonucleoprotein complex;0.042087656341151!GO:0005938;cell cortex;0.0427379871180151!GO:0004722;protein serine/threonine phosphatase activity;0.0430136331260461!GO:0006672;ceramide metabolic process;0.0431000076433134!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0439310492757627!GO:0031252;leading edge;0.0442123361460729!GO:0033170;DNA-protein loading ATPase activity;0.0447614968106161!GO:0003689;DNA clamp loader activity;0.0447614968106161!GO:0004239;methionyl aminopeptidase activity;0.0449322171834622!GO:0030911;TPR domain binding;0.045174386519703!GO:0004536;deoxyribonuclease activity;0.045174386519703!GO:0016180;snRNA processing;0.0452723358440615!GO:0016073;snRNA metabolic process;0.0452723358440615!GO:0044433;cytoplasmic vesicle part;0.0453095575770226!GO:0000323;lytic vacuole;0.0455709941384607!GO:0005764;lysosome;0.0455709941384607!GO:0004659;prenyltransferase activity;0.0462878408422724!GO:0016301;kinase activity;0.0466734113966241!GO:0006266;DNA ligation;0.0480819206933092!GO:0022884;macromolecule transmembrane transporter activity;0.0480819206933092!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0480819206933092!GO:0008538;proteasome activator activity;0.0493981667011707!GO:0042809;vitamin D receptor binding;0.0494646044450766!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0496709734543162!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0496709734543162!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0496709734543162 | |||
|sample_id=10826 | |sample_id=10826 | ||
|sample_note= | |sample_note= | ||
|sample_sex=female | |sample_sex=female | ||
|sample_species= | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=GATA6:3.72843593209;MYB:2.05150464831;ELK1,4_GABP{A,B1}:2.00337734644;STAT5{A,B}:1.55522551783;NFY{A,B,C}:1.50612836929;E2F1..5:1.49453629113;CDX1,2,4:1.44193232442;POU3F1..4:1.31510832556;NRF1:1.2650096368;PBX1:1.16721213806;NR5A1,2:1.14185211949;POU2F1..3:1.11837369834;ZBTB16:1.10686317931;NFIX:1.08720084498;HOXA9_MEIS1:1.06920645625;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.06564855296;ZNF143:1.05343792169;YY1:0.902502052986;PITX1..3:0.885759322554;NR6A1:0.87613389778;CRX:0.858137969126;OCT4_SOX2{dimer}:0.760914171561;POU1F1:0.714875543189;STAT1,3:0.697727734479;HOX{A5,B5}:0.657768756582;PAX8:0.643696366911;ADNP_IRX_SIX_ZHX:0.62994016939;HOX{A6,A7,B6,B7}:0.603469860912;AHR_ARNT_ARNT2:0.602036776915;HES1:0.585929735852;ELF1,2,4:0.567865717285;ZNF148:0.566875140907;T:0.563035600516;ESRRA:0.555284510999;FOXQ1:0.550129750287;NFE2:0.53133417055;NANOG:0.499242508865;RBPJ:0.487420771859;SPZ1:0.465823599349;RORA:0.425542392723;NR1H4:0.425419810012;CUX2:0.424537320677;IKZF1:0.395394625608;SOX{8,9,10}:0.391764154609;BREu{core}:0.385185299821;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.384301258752;SMAD1..7,9:0.361244944666;PAX3,7:0.306438257218;TOPORS:0.291240733509;NKX2-1,4:0.278554296415;PRRX1,2:0.263573481072;AR:0.240062526579;NKX2-3_NKX2-5:0.21494275273;FOXA2:0.203737849929;GFI1:0.200385128783;NANOG{mouse}:0.191868069718;IKZF2:0.181041895926;ARID5B:0.11555894846;NKX3-2:0.10627661182;HOX{A4,D4}:0.0927556514965;ONECUT1,2:0.0838623880675;AIRE:0.081343839072;EVI1:0.071933466462;SNAI1..3:0.0702664866206;HNF4A_NR2F1,2:0.0570793702842;RXRA_VDR{dimer}:0.0550751662106;ALX1:0.026279674034;CREB1:0.021841336828;VSX1,2:-0.00165111493043;HAND1,2:-0.0124269677323;ZEB1:-0.0302476130128;PAX4:-0.0509240804661;bHLH_family:-0.0524790848309;EN1,2:-0.0691294041314;FOXD3:-0.0859405485627;PPARG:-0.0906897550132;MYOD1:-0.0998463096425;TEF:-0.100316105852;ATF4:-0.109038808181;SPIB:-0.123704454539;NKX2-2,8:-0.135729739191;LEF1_TCF7_TCF7L1,2:-0.146864629239;POU5F1:-0.15137335937;FOSL2:-0.163153773237;ZNF384:-0.167479134761;NFE2L2:-0.172339533988;HLF:-0.173140019405;ATF5_CREB3:-0.184332171988;POU6F1:-0.187215563182;NKX6-1,2:-0.201096226706;PAX2:-0.213392519663;PAX6:-0.219753956757;HIF1A:-0.220932577299;SPI1:-0.222366953591;CEBPA,B_DDIT3:-0.231482411384;TFDP1:-0.237316825432;PDX1:-0.242122352769;HNF1A:-0.262207049833;MEF2{A,B,C,D}:-0.266958101487;MAFB:-0.268110934043;FOXN1:-0.303577008491;BACH2:-0.333350395039;RUNX1..3:-0.336585078676;FOXP1:-0.359603558634;FOS_FOS{B,L1}_JUN{B,D}:-0.374415741372;NFKB1_REL_RELA:-0.391336011042;NKX3-1:-0.398363531261;FOX{F1,F2,J1}:-0.406693290177;ETS1,2:-0.415623014718;UFEwm:-0.421415501248;HSF1,2:-0.432276680679;EGR1..3:-0.436657204686;FOXP3:-0.442951851264;STAT2,4,6:-0.448198069317;RFX2..5_RFXANK_RFXAP:-0.453123719218;SP1:-0.45386508029;ZBTB6:-0.461416282855;SOX5:-0.494790867502;RFX1:-0.505960899067;GATA4:-0.521584378986;KLF4:-0.523278170715;FOX{I1,J2}:-0.524448016865;NFE2L1:-0.541103171698;RXR{A,B,G}:-0.549301655715;TLX2:-0.551261894048;XCPE1{core}:-0.55340784593;TGIF1:-0.562287209243;PAX1,9:-0.582115469757;LMO2:-0.599192246871;RREB1:-0.603047470666;FOXM1:-0.624444990116;SOX2:-0.635044998728;SOX17:-0.637656926067;LHX3,4:-0.662079894631;ZFP161:-0.662607996513;TFAP4:-0.667509600149;REST:-0.680367368829;EP300:-0.686077003901;ALX4:-0.687842153998;PATZ1:-0.690167056613;NHLH1,2:-0.69573132286;NFIL3:-0.73490038006;IRF7:-0.780716347854;ATF2:-0.780857818084;ZIC1..3:-0.782435977748;NFATC1..3:-0.784166182473;ZNF238:-0.798443399238;DBP:-0.804943636542;DMAP1_NCOR{1,2}_SMARC:-0.815529600056;JUN:-0.820628922189;GTF2I:-0.830087311839;SREBF1,2:-0.855050924365;TP53:-0.858179748844;SRF:-0.862286479745;XBP1:-0.870094717364;MZF1:-0.874123659575;MED-1{core}:-0.88701992909;BPTF:-0.900575620346;TEAD1:-0.904425947489;GTF2A1,2:-0.960456237002;CDC5L:-0.974150396268;TBP:-1.02468298782;HMGA1,2:-1.02902824019;FOX{D1,D2}:-1.04278691076;ZNF423:-1.09237172274;NR3C1:-1.11965017273;GCM1,2:-1.12384581527;MAZ:-1.13221113439;IRF1,2:-1.13855209931;MYFfamily:-1.17202492289;TFAP2{A,C}:-1.18022028922;ESR1:-1.1807300467;MYBL2:-1.19267128927;HMX1:-1.2103678837;TBX4,5:-1.22308821738;HBP1_HMGB_SSRP1_UBTF:-1.23305473993;EBF1:-1.23708398426;ATF6:-1.26027926943;PRDM1:-1.26605537076;TLX1..3_NFIC{dimer}:-1.27926064008;HIC1:-1.30033484284;PAX5:-1.32468362411;GFI1B:-1.45522043397;TAL1_TCF{3,4,12}:-1.49861527867;MTF1:-1.50695872123;GLI1..3:-1.51655498367;FOXO1,3,4:-1.5199658775;GZF1:-1.53756428251;MTE{core}:-1.56057392297;TFAP2B:-1.72917646693;FOXL1:-1.7602451765;TFCP2:-2.36272046395 | |top_motifs=GATA6:3.72843593209;MYB:2.05150464831;ELK1,4_GABP{A,B1}:2.00337734644;STAT5{A,B}:1.55522551783;NFY{A,B,C}:1.50612836929;E2F1..5:1.49453629113;CDX1,2,4:1.44193232442;POU3F1..4:1.31510832556;NRF1:1.2650096368;PBX1:1.16721213806;NR5A1,2:1.14185211949;POU2F1..3:1.11837369834;ZBTB16:1.10686317931;NFIX:1.08720084498;HOXA9_MEIS1:1.06920645625;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.06564855296;ZNF143:1.05343792169;YY1:0.902502052986;PITX1..3:0.885759322554;NR6A1:0.87613389778;CRX:0.858137969126;OCT4_SOX2{dimer}:0.760914171561;POU1F1:0.714875543189;STAT1,3:0.697727734479;HOX{A5,B5}:0.657768756582;PAX8:0.643696366911;ADNP_IRX_SIX_ZHX:0.62994016939;HOX{A6,A7,B6,B7}:0.603469860912;AHR_ARNT_ARNT2:0.602036776915;HES1:0.585929735852;ELF1,2,4:0.567865717285;ZNF148:0.566875140907;T:0.563035600516;ESRRA:0.555284510999;FOXQ1:0.550129750287;NFE2:0.53133417055;NANOG:0.499242508865;RBPJ:0.487420771859;SPZ1:0.465823599349;RORA:0.425542392723;NR1H4:0.425419810012;CUX2:0.424537320677;IKZF1:0.395394625608;SOX{8,9,10}:0.391764154609;BREu{core}:0.385185299821;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.384301258752;SMAD1..7,9:0.361244944666;PAX3,7:0.306438257218;TOPORS:0.291240733509;NKX2-1,4:0.278554296415;PRRX1,2:0.263573481072;AR:0.240062526579;NKX2-3_NKX2-5:0.21494275273;FOXA2:0.203737849929;GFI1:0.200385128783;NANOG{mouse}:0.191868069718;IKZF2:0.181041895926;ARID5B:0.11555894846;NKX3-2:0.10627661182;HOX{A4,D4}:0.0927556514965;ONECUT1,2:0.0838623880675;AIRE:0.081343839072;EVI1:0.071933466462;SNAI1..3:0.0702664866206;HNF4A_NR2F1,2:0.0570793702842;RXRA_VDR{dimer}:0.0550751662106;ALX1:0.026279674034;CREB1:0.021841336828;VSX1,2:-0.00165111493043;HAND1,2:-0.0124269677323;ZEB1:-0.0302476130128;PAX4:-0.0509240804661;bHLH_family:-0.0524790848309;EN1,2:-0.0691294041314;FOXD3:-0.0859405485627;PPARG:-0.0906897550132;MYOD1:-0.0998463096425;TEF:-0.100316105852;ATF4:-0.109038808181;SPIB:-0.123704454539;NKX2-2,8:-0.135729739191;LEF1_TCF7_TCF7L1,2:-0.146864629239;POU5F1:-0.15137335937;FOSL2:-0.163153773237;ZNF384:-0.167479134761;NFE2L2:-0.172339533988;HLF:-0.173140019405;ATF5_CREB3:-0.184332171988;POU6F1:-0.187215563182;NKX6-1,2:-0.201096226706;PAX2:-0.213392519663;PAX6:-0.219753956757;HIF1A:-0.220932577299;SPI1:-0.222366953591;CEBPA,B_DDIT3:-0.231482411384;TFDP1:-0.237316825432;PDX1:-0.242122352769;HNF1A:-0.262207049833;MEF2{A,B,C,D}:-0.266958101487;MAFB:-0.268110934043;FOXN1:-0.303577008491;BACH2:-0.333350395039;RUNX1..3:-0.336585078676;FOXP1:-0.359603558634;FOS_FOS{B,L1}_JUN{B,D}:-0.374415741372;NFKB1_REL_RELA:-0.391336011042;NKX3-1:-0.398363531261;FOX{F1,F2,J1}:-0.406693290177;ETS1,2:-0.415623014718;UFEwm:-0.421415501248;HSF1,2:-0.432276680679;EGR1..3:-0.436657204686;FOXP3:-0.442951851264;STAT2,4,6:-0.448198069317;RFX2..5_RFXANK_RFXAP:-0.453123719218;SP1:-0.45386508029;ZBTB6:-0.461416282855;SOX5:-0.494790867502;RFX1:-0.505960899067;GATA4:-0.521584378986;KLF4:-0.523278170715;FOX{I1,J2}:-0.524448016865;NFE2L1:-0.541103171698;RXR{A,B,G}:-0.549301655715;TLX2:-0.551261894048;XCPE1{core}:-0.55340784593;TGIF1:-0.562287209243;PAX1,9:-0.582115469757;LMO2:-0.599192246871;RREB1:-0.603047470666;FOXM1:-0.624444990116;SOX2:-0.635044998728;SOX17:-0.637656926067;LHX3,4:-0.662079894631;ZFP161:-0.662607996513;TFAP4:-0.667509600149;REST:-0.680367368829;EP300:-0.686077003901;ALX4:-0.687842153998;PATZ1:-0.690167056613;NHLH1,2:-0.69573132286;NFIL3:-0.73490038006;IRF7:-0.780716347854;ATF2:-0.780857818084;ZIC1..3:-0.782435977748;NFATC1..3:-0.784166182473;ZNF238:-0.798443399238;DBP:-0.804943636542;DMAP1_NCOR{1,2}_SMARC:-0.815529600056;JUN:-0.820628922189;GTF2I:-0.830087311839;SREBF1,2:-0.855050924365;TP53:-0.858179748844;SRF:-0.862286479745;XBP1:-0.870094717364;MZF1:-0.874123659575;MED-1{core}:-0.88701992909;BPTF:-0.900575620346;TEAD1:-0.904425947489;GTF2A1,2:-0.960456237002;CDC5L:-0.974150396268;TBP:-1.02468298782;HMGA1,2:-1.02902824019;FOX{D1,D2}:-1.04278691076;ZNF423:-1.09237172274;NR3C1:-1.11965017273;GCM1,2:-1.12384581527;MAZ:-1.13221113439;IRF1,2:-1.13855209931;MYFfamily:-1.17202492289;TFAP2{A,C}:-1.18022028922;ESR1:-1.1807300467;MYBL2:-1.19267128927;HMX1:-1.2103678837;TBX4,5:-1.22308821738;HBP1_HMGB_SSRP1_UBTF:-1.23305473993;EBF1:-1.23708398426;ATF6:-1.26027926943;PRDM1:-1.26605537076;TLX1..3_NFIC{dimer}:-1.27926064008;HIC1:-1.30033484284;PAX5:-1.32468362411;GFI1B:-1.45522043397;TAL1_TCF{3,4,12}:-1.49861527867;MTF1:-1.50695872123;GLI1..3:-1.51655498367;FOXO1,3,4:-1.5199658775;GZF1:-1.53756428251;MTE{core}:-1.56057392297;TFAP2B:-1.72917646693;FOXL1:-1.7602451765;TFCP2:-2.36272046395 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10826-111C7;search_select_hide=table117:FF:10826-111C7 | |||
}} | }} | ||
Latest revision as of 15:07, 3 June 2020
| Name: | chronic myelogenous leukemia cell line:K562 ENCODE, biol_rep3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12336 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12336
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12336
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0307 |
| 10 | 10 | 0.0686 |
| 100 | 100 | 0.331 |
| 101 | 101 | 0.568 |
| 102 | 102 | 0.35 |
| 103 | 103 | 0.922 |
| 104 | 104 | 0.643 |
| 105 | 105 | 0.941 |
| 106 | 106 | 0.046 |
| 107 | 107 | 0.017 |
| 108 | 108 | 0.962 |
| 109 | 109 | 0.021 |
| 11 | 11 | 0.182 |
| 110 | 110 | 0.187 |
| 111 | 111 | 0.383 |
| 112 | 112 | 0.869 |
| 113 | 113 | 0.136 |
| 114 | 114 | 0.0304 |
| 115 | 115 | 0.572 |
| 116 | 116 | 0.508 |
| 117 | 117 | 0.00819 |
| 118 | 118 | 0.225 |
| 119 | 119 | 0.686 |
| 12 | 12 | 0.903 |
| 120 | 120 | 0.531 |
| 121 | 121 | 0.896 |
| 122 | 122 | 0.0961 |
| 123 | 123 | 0.915 |
| 124 | 124 | 0.495 |
| 125 | 125 | 0.608 |
| 126 | 126 | 0.17 |
| 127 | 127 | 0.119 |
| 128 | 128 | 0.0732 |
| 129 | 129 | 0.765 |
| 13 | 13 | 0.00115 |
| 130 | 130 | 0.034 |
| 131 | 131 | 0.476 |
| 132 | 132 | 0.0935 |
| 133 | 133 | 0.177 |
| 134 | 134 | 0.893 |
| 135 | 135 | 0.257 |
| 136 | 136 | 0.0343 |
| 137 | 137 | 0.274 |
| 138 | 138 | 0.583 |
| 139 | 139 | 0.391 |
| 14 | 14 | 0.538 |
| 140 | 140 | 0.016 |
| 141 | 141 | 0.0166 |
| 142 | 142 | 0.572 |
| 143 | 143 | 0.682 |
| 144 | 144 | 0.64 |
| 145 | 145 | 0.817 |
| 146 | 146 | 0.881 |
| 147 | 147 | 0.614 |
| 148 | 148 | 0.713 |
| 149 | 149 | 0.159 |
| 15 | 15 | 0.509 |
| 150 | 150 | 0.432 |
| 151 | 151 | 0.387 |
| 152 | 152 | 0.128 |
| 153 | 153 | 0.858 |
| 154 | 154 | 0.339 |
| 155 | 155 | 0.17 |
| 156 | 156 | 0.61 |
| 157 | 157 | 0.485 |
| 158 | 158 | 0.979 |
| 159 | 159 | 0.142 |
| 16 | 16 | 0.714 |
| 160 | 160 | 0.979 |
| 161 | 161 | 0.0366 |
| 162 | 162 | 0.448 |
| 163 | 163 | 0.457 |
| 164 | 164 | 0.512 |
| 165 | 165 | 0.813 |
| 166 | 166 | 0.0413 |
| 167 | 167 | 0.396 |
| 168 | 168 | 0.572 |
| 169 | 169 | 0.558 |
| 17 | 17 | 0.771 |
| 18 | 18 | 0.941 |
| 19 | 19 | 0.902 |
| 2 | 2 | 0.23 |
| 20 | 20 | 0.0576 |
| 21 | 21 | 0.305 |
| 22 | 22 | 0.631 |
| 23 | 23 | 0.0166 |
| 24 | 24 | 0.128 |
| 25 | 25 | 0.332 |
| 26 | 26 | 0.138 |
| 27 | 27 | 0.285 |
| 28 | 28 | 0.445 |
| 29 | 29 | 0.0202 |
| 3 | 3 | 0.399 |
| 30 | 30 | 0.162 |
| 31 | 31 | 0.481 |
| 32 | 32 | 0.0525 |
| 33 | 33 | 0.0404 |
| 34 | 34 | 0.4 |
| 35 | 35 | 0.314 |
| 36 | 36 | 0.0346 |
| 37 | 37 | 0.222 |
| 38 | 38 | 0.314 |
| 39 | 39 | 0.24 |
| 4 | 4 | 0.0623 |
| 40 | 40 | 0.217 |
| 41 | 41 | 0.899 |
| 42 | 42 | 0.264 |
| 43 | 43 | 0.735 |
| 44 | 44 | 0.639 |
| 45 | 45 | 0.518 |
| 46 | 46 | 0.435 |
| 47 | 47 | 0.0282 |
| 48 | 48 | 0.198 |
| 49 | 49 | 0.255 |
| 5 | 5 | 0.982 |
| 50 | 50 | 0.959 |
| 51 | 51 | 0.907 |
| 52 | 52 | 0.0299 |
| 53 | 53 | 0.893 |
| 54 | 54 | 0.623 |
| 55 | 55 | 0.0425 |
| 56 | 56 | 0.814 |
| 57 | 57 | 0.544 |
| 58 | 58 | 0.502 |
| 59 | 59 | 0.892 |
| 6 | 6 | 0.289 |
| 60 | 60 | 0.362 |
| 61 | 61 | 0.0773 |
| 62 | 62 | 0.417 |
| 63 | 63 | 0.412 |
| 64 | 64 | 0.555 |
| 65 | 65 | 0.434 |
| 66 | 66 | 4.49955e-6 |
| 67 | 67 | 0.612 |
| 68 | 68 | 0.0829 |
| 69 | 69 | 0.741 |
| 7 | 7 | 0.0577 |
| 70 | 70 | 0.291 |
| 71 | 71 | 0.0438 |
| 72 | 72 | 0.288 |
| 73 | 73 | 0.994 |
| 74 | 74 | 0.445 |
| 75 | 75 | 0.00584 |
| 76 | 76 | 0.738 |
| 77 | 77 | 0.365 |
| 78 | 78 | 5.05109e-4 |
| 79 | 79 | 0.145 |
| 8 | 8 | 0.495 |
| 80 | 80 | 0.191 |
| 81 | 81 | 0.239 |
| 82 | 82 | 0.895 |
| 83 | 83 | 0.0775 |
| 84 | 84 | 0.548 |
| 85 | 85 | 0.161 |
| 86 | 86 | 0.709 |
| 87 | 87 | 0.0664 |
| 88 | 88 | 0.919 |
| 89 | 89 | 0.645 |
| 9 | 9 | 0.524 |
| 90 | 90 | 0.463 |
| 91 | 91 | 0.0127 |
| 92 | 92 | 0.539 |
| 93 | 93 | 0.78 |
| 94 | 94 | 0.782 |
| 95 | 95 | 0.0284 |
| 96 | 96 | 0.697 |
| 97 | 97 | 0.343 |
| 98 | 98 | 0.468 |
| 99 | 99 | 0.462 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12336
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100664 K-562 cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
1036 (chronic leukemia)
8692 (myeloid leukemia)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0102580 (chronic myeloid leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0100740 (myeloid leukemia cell line sample)
0100664 (K-562 cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
