FF:10698-109G5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005790 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX007980;DRR008852;DRZ000277;DRZ001662;DRZ011627;DRZ013012 | ||
|ancestors_in_disease_facet=DOID:0050686,DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001264,UBERON:0002100,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002323,UBERON:0005177,UBERON:0000464,UBERON:0004458,UBERON:0000949 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000083,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:1799,DOID:0050687,DOID:305,DOID:170,DOID:10165,DOID:1793,DOID:1798 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100794,FF:0103533 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100794,FF:0101120 | |fonse_cell_line=FF:0100794,FF:0101120 | ||
|fonse_cell_line_closure=FF:0100794,FF:0101120 | |fonse_cell_line_closure=FF:0100794,FF:0101120 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/pancreatic%2520carcinoma%2520cell%2520line%253aNOR-P1.CNhs11832.10698-109G5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/pancreatic%2520carcinoma%2520cell%2520line%253aNOR-P1.CNhs11832.10698-109G5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/pancreatic%2520carcinoma%2520cell%2520line%253aNOR-P1.CNhs11832.10698-109G5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/pancreatic%2520carcinoma%2520cell%2520line%253aNOR-P1.CNhs11832.10698-109G5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/pancreatic%2520carcinoma%2520cell%2520line%253aNOR-P1.CNhs11832.10698-109G5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10698-109G5 | |id=FF:10698-109G5 | ||
|is_a=DOID:1798;;EFO:0002091;;FF: | |is_a=DOID:1798;;EFO:0002091;;FF:0000210;;FF:0103533 | ||
|is_obsolete= | |||
|library_id=CNhs11832 | |||
|library_id_phase_based=2:CNhs11832 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10698 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10698 | |||
|name=pancreatic carcinoma cell line:NOR-P1 | |name=pancreatic carcinoma cell line:NOR-P1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11832,LSID829,release010,COMPLETED | |profile_hcage=CNhs11832,LSID829,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.279298308339746,0,0.346361804732635,0,0,-0.0592907857724987,0,0.0861621287282421,0.274740581363076,0,0,0,0,0,0,0,0,0.101027244313887,0,0,0.182931785175525,0,0.256853413120091,0,0,0,0,0,0.265566364653699,0,0,0.319343154793756,0,0,0,0,0,0,0,0,0,0,0,0,0.0851929463830818,0.156565815180013,0,0,0,0,0,0,0,0.424855766685801,0,0,0,0,0,-0.0281559821092994,0,0.266531899679151,0,0,0.312832796255422,0,0,0,0,0,0,0,0,0.101027244313887,0,0,0,0,0,0,0,0,0.10600687620835,0,0,0,0,0,0,0,0,0,0,0.0145540388475358,-0.0852907111819145,0,0,0,0,0.0848964339378189,0.287493341223575,0,0,0,0,0,0,0.182931785175525,0,0,0,0.141979514744706,0,0,0,0,0,0,-0.0458599717655173,0.452299744572618,0,0,0,-0.152915815100357,0,0,0.197805633732776,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0.182931785175525,0.0848964339378189,0,0,0.643924915089018,0,0,0,0,0,0,0,0,0.00463450774234367,0,0.0518858535577233,0.686556637821371,0,0,-0.271653686699681,0,0,0,0,0.251813383027908,0,0,0.251813383027908,0,-0.0270926226386773,0,-0.0504125515893149,0,0,0,0,0.0283674070785236,0.253124385781084,0,-0.17425806114951,0.242906539342411,0,0,0,0,-0.178774776746562,0,0.190371316626038,-0.0827201683234173,-0.221611588102807,-0.529593068965219,-0.055712496781182,0,0,0,-0.491151453331595,0.513103114012635,0,0,-0.121779851751874,-0.181349618560659,0,0,-0.391044581551635,0,0.0585802531504331,-0.186016456609166,0,0.114485014880779,0,0,0,0,0,0.101027244313887,0,0,0,0,0,-0.00697984466449295,0.3657350127863,0,0.363524260921756,0.812916068242847,0,-0.306374900466733,0,0.0057302188697387,0.750879325372948,-0.0405828072165471,-0.0125274607695291,0.125579354939542,0,0.149910017562705,-0.17506238446412,-0.303976443762888,0.0145540388475358,-0.147401849371139,-0.189981719549847,0,-0.340096774136387,0.320455320164463,0.0809732152850203,0.394983433945195,0,0.0888397685419904,0.409863241427809,0,0.101027244313887,0,0.555104489591665,0,0.0859680199295816,-0.0378149699041554,0.11308000046313,-0.515362036265825,0.25709432452899,0.258295153772168,-0.473115177937475,-0.0395325284566706,-0.457436452896595,0,-0.371058702746756,0,0,0.0426525638675592,-0.0445519712858731,0.0765627937448069,-0.0572295564991878,0,0.208746147654288,-0.0683442610773682,0,-0.616703403850166,0.150571403235271,0,0,-0.215252969949656,0,0,0,0,0,0.0569819924421331,-0.228241342610387,0.35608513133976,0,0.118370549859579,-0.248020462289762,0.0113651141349796,0,-0.151221063932857,-0.0449826531435068,0.081436141359707,0.0716559430802421,0,0.0874058903242068,0.460409134204146,-0.0603707221068774,-0.422394805391737,-0.0584468268118252,-0.239775702585447,-0.0156570422850566,0.474302397908536,0.0411319155546167,0.282843683687234,-0.0881268324752877,0,-0.168334960096634,-0.679498131621524,0.0111181067008443,-0.123119117221565,0.311250800419779,-0.286321588215642,0,0.126999769269953,0,-0.164756340245125,-0.229182951053461,0.297299434233194,-0.156107175881027,0,0.115362658676104,-0.536317554746066,0.101027244313887,-0.0089709026062762,-0.123269714985464,1.09773940249115,-0.0493398390207519,0.538796328000505,-0.110623183550702,0.137674037764058,0,0.0049745334330078,0,0.101027244313887,-0.047148001900299,0.290496034545343,0,-0.00893718020479425,0.10600687620835,0.132372767618586,0.195279726984845,0.182931785175525,0,0.911752688739834,0,0,0.473256119795486,-0.0636048451378017,0.741947577344659,-0.253326341486756,-0.090861537863577,0.637282789484854,0,0,-0.0765005216512883,0.101027244313887,-0.239291427649516,0,0,-0.19936767444188,-0.116628112990133,0,0,0,0.113385503929802,0,0.123975274190169,0,0,0,0,0,0.500621608103356,-0.354833330216448,0,0.119971587169974,0,0,0,0,0,0,0,0,-1.40939905364415,-0.00874803116516245,0.592192374745326,0,0,0.386850342195137,0,-0.215723402553475,0.511973228327022,0,0.179388093922147,0,0,0,0,0.165672393238697,0,0,0.0505136221569435,0.141979514744706,0.0432967872602234,0.185595156295489,0,0,0,0.392054897271624,0,0,0,0,0.307069540068857,0,0,-0.380116790358472,0,-0.0986674401279666,-0.0815818795468414,0,-0.380950239980748,-0.337777064154834,0.225194273974,0,0.101027244313887,0.264624940519844,0,0.0161299068529891,-0.0886478293432371,0,0.182931785175525,0.0295888462108268,0,0,0,0,0.182931785175525,0,-0.214314512399756,0,0,0,0,0,0,0,0.101027244313887,0,0,0,-0.339163623008465,0.00880318765537698,0.0809587149016283,0,0,0,0,0,0,0.283562798895929,0.177891946725016,0,0,0.0188506482177389,0,0,0.101027244313887,0,0,0.243783850758504,0.141979514744706,0,0,0,0,0.266531899679151,0,0.101027244313887,0,0,0.297667779698245,0,0,0.0861621287282421,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0222918417215603,-0.135551354801249,0.558596616679491,0,0,0,0,0,0,0.251138774103641,0,0.251813383027908,0,0,-0.0128571293950898,0.692723609465269,0,0,0.773016367062013,0,-0.0592907857724987,0,0,0,0,0,0.155853975654321,0.155625400209889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306390584474161,0,-0.28720751597291,-0.274741350151835,0,0,-0.141162460045279,0,0,0,0,0,0,0.0191731981284167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0089222511062437,0,0,0.452299744572618,0,0,0,0,0,0,0.0910486477088655,0,0,0,0,0,0,0,0.265566364653699,0,0,-0.000566917212763446,0,0,0,0,0,0,-0.196510948068947,-0.141240885078441,-0.0893083360899515,0,0,0,-0.0038719503255115,0,0,-0.0110457116825239,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0.0505136221569435,0,0,0,0,0,0,0,0,0,0,0,1.43858310477993,0,0,0,0,0,0,0,0,0.251813383027908,0.256853413120091,0,0,0.101027244313887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141979514744706,0,0,0,0,0,0,0.016502258881527,0.182931785175525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.021008776045249,0,0,0,-0.0301544444815184,0,0,0,0,0,0,0.182931785175525,0,0.182931785175525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251813383027908,0,0,0,0,0,0,0,0.182931785175525,0,0,0,0.0852673642398896,0,0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| |||
|rna_box=109 | |rna_box=109 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=104.49322 | |rna_weight_ug=104.49322 | ||
|sample_age= | |sample_age= | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB2139 | |sample_cell_catalog=RCB2139 | ||
|sample_cell_line=NOR-P1 | |sample_cell_line=NOR-P1 | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.89402832751416e-234!GO:0043231;intracellular membrane-bound organelle;3.40312323856954e-201!GO:0043227;membrane-bound organelle;6.80536548512304e-201!GO:0043226;organelle;1.76062404231616e-199!GO:0043229;intracellular organelle;4.30727037557369e-199!GO:0005737;cytoplasm;3.65282229457949e-156!GO:0044422;organelle part;4.10005096868246e-148!GO:0044446;intracellular organelle part;2.25421022691079e-147!GO:0044444;cytoplasmic part;1.2188065763465e-114!GO:0032991;macromolecular complex;4.38973251896148e-104!GO:0044237;cellular metabolic process;1.80838490148156e-103!GO:0044238;primary metabolic process;1.90953535395562e-103!GO:0043170;macromolecule metabolic process;2.42300914803768e-96!GO:0005634;nucleus;1.95689456750274e-92!GO:0030529;ribonucleoprotein complex;9.25089798989198e-88!GO:0003723;RNA binding;2.41504051266041e-82!GO:0044428;nuclear part;2.49954840806607e-82!GO:0043233;organelle lumen;9.07911573183935e-74!GO:0031974;membrane-enclosed lumen;9.07911573183935e-74!GO:0005515;protein binding;7.39985784567959e-64!GO:0005739;mitochondrion;4.92290598890828e-61!GO:0043283;biopolymer metabolic process;1.84958687864836e-58!GO:0006396;RNA processing;1.94187645559664e-57!GO:0043234;protein complex;1.799693939961e-53!GO:0006412;translation;2.50728052279119e-52!GO:0005840;ribosome;5.7663022798601e-52!GO:0019538;protein metabolic process;2.07288525250757e-51!GO:0031981;nuclear lumen;6.22752597265576e-50!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.17724624283783e-49!GO:0031090;organelle membrane;1.63484174853215e-48!GO:0010467;gene expression;2.11730175542021e-48!GO:0044260;cellular macromolecule metabolic process;7.53696325503574e-46!GO:0044267;cellular protein metabolic process;1.53684111183154e-45!GO:0016043;cellular component organization and biogenesis;2.84502477135581e-45!GO:0003735;structural constituent of ribosome;3.80918651310447e-44!GO:0016071;mRNA metabolic process;1.72328087592326e-43!GO:0033036;macromolecule localization;6.84505478814142e-43!GO:0015031;protein transport;1.09398705211188e-42!GO:0009058;biosynthetic process;4.33590701980662e-42!GO:0009059;macromolecule biosynthetic process;1.07422883476867e-41!GO:0044249;cellular biosynthetic process;2.90022460658817e-40!GO:0033279;ribosomal subunit;4.86766391862314e-40!GO:0045184;establishment of protein localization;2.70501997414962e-39!GO:0031967;organelle envelope;3.24154843261821e-39!GO:0006397;mRNA processing;3.24154843261821e-39!GO:0008380;RNA splicing;4.46524356578568e-39!GO:0044429;mitochondrial part;6.7824073542132e-39!GO:0031975;envelope;6.79109242953567e-39!GO:0008104;protein localization;1.62850075569568e-38!GO:0043228;non-membrane-bound organelle;1.116651073546e-37!GO:0043232;intracellular non-membrane-bound organelle;1.116651073546e-37!GO:0006259;DNA metabolic process;1.20242929811582e-37!GO:0065003;macromolecular complex assembly;1.39212293997361e-34!GO:0006996;organelle organization and biogenesis;2.37052382822771e-34!GO:0046907;intracellular transport;4.51721229847634e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.23943151258502e-32!GO:0022607;cellular component assembly;3.63424305480352e-31!GO:0005654;nucleoplasm;1.08458442523167e-30!GO:0005829;cytosol;1.93414299684718e-30!GO:0003676;nucleic acid binding;7.08364856086677e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.21928493388798e-29!GO:0006886;intracellular protein transport;3.15484138446272e-28!GO:0005681;spliceosome;1.46947385122721e-27!GO:0000166;nucleotide binding;1.98576097843151e-27!GO:0007049;cell cycle;5.06000030438164e-27!GO:0019866;organelle inner membrane;8.606171920895e-26!GO:0005740;mitochondrial envelope;8.89332875240577e-26!GO:0031966;mitochondrial membrane;5.6943309326965e-25!GO:0044445;cytosolic part;1.78853728403652e-24!GO:0006974;response to DNA damage stimulus;2.64950792174881e-24!GO:0006119;oxidative phosphorylation;3.08546854799778e-24!GO:0016874;ligase activity;8.66985705444725e-24!GO:0005743;mitochondrial inner membrane;1.05459852233632e-23!GO:0044451;nucleoplasm part;1.85510962121106e-23!GO:0016070;RNA metabolic process;3.25296607182937e-23!GO:0044455;mitochondrial membrane part;2.01178177768213e-22!GO:0006512;ubiquitin cycle;1.14117975196728e-21!GO:0051649;establishment of cellular localization;1.39650084516601e-21!GO:0015935;small ribosomal subunit;1.57038828913946e-21!GO:0051641;cellular localization;2.33847772354434e-21!GO:0006281;DNA repair;6.78708959091798e-21!GO:0005694;chromosome;1.87783538334901e-20!GO:0005730;nucleolus;2.93151303739389e-20!GO:0000278;mitotic cell cycle;2.96680432993599e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;7.03245504930348e-20!GO:0016462;pyrophosphatase activity;9.18521513184368e-20!GO:0015934;large ribosomal subunit;1.09372771570092e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.38098818132129e-19!GO:0022402;cell cycle process;2.99421346671999e-19!GO:0017111;nucleoside-triphosphatase activity;3.60064599039534e-19!GO:0012505;endomembrane system;3.73167320800371e-19!GO:0022618;protein-RNA complex assembly;4.46245424015243e-19!GO:0005524;ATP binding;5.3239719749567e-19!GO:0032553;ribonucleotide binding;8.37211518982573e-19!GO:0032555;purine ribonucleotide binding;8.37211518982573e-19!GO:0008134;transcription factor binding;8.41685983275114e-19!GO:0044265;cellular macromolecule catabolic process;1.23672828500171e-18!GO:0048770;pigment granule;1.72439681551869e-18!GO:0042470;melanosome;1.72439681551869e-18!GO:0032559;adenyl ribonucleotide binding;3.27747183866802e-18!GO:0016887;ATPase activity;6.16820064605055e-18!GO:0017076;purine nucleotide binding;7.33896633193804e-18!GO:0006260;DNA replication;1.11509003288458e-17!GO:0042623;ATPase activity, coupled;1.68906183287596e-17!GO:0044427;chromosomal part;2.23461825547658e-17!GO:0022403;cell cycle phase;4.13617899394478e-17!GO:0006457;protein folding;4.73072535139757e-17!GO:0043285;biopolymer catabolic process;4.97631767428364e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;5.10452375428891e-17!GO:0030554;adenyl nucleotide binding;6.01849992833155e-17!GO:0043412;biopolymer modification;7.79363538214987e-17!GO:0019941;modification-dependent protein catabolic process;7.87731332498732e-17!GO:0043632;modification-dependent macromolecule catabolic process;7.87731332498732e-17!GO:0009719;response to endogenous stimulus;8.05990882066865e-17!GO:0051301;cell division;8.10987506180094e-17!GO:0044257;cellular protein catabolic process;1.04193718112879e-16!GO:0009057;macromolecule catabolic process;1.06744092967072e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.32216458314187e-16!GO:0005746;mitochondrial respiratory chain;1.3474031877815e-16!GO:0051186;cofactor metabolic process;3.402146080668e-16!GO:0031980;mitochondrial lumen;4.75044735154928e-16!GO:0005759;mitochondrial matrix;4.75044735154928e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.9371829303298e-16!GO:0000087;M phase of mitotic cell cycle;1.10996108440165e-15!GO:0051276;chromosome organization and biogenesis;1.2971883622086e-15!GO:0007067;mitosis;1.69874676553532e-15!GO:0008135;translation factor activity, nucleic acid binding;2.70934558341984e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;3.08208455322596e-15!GO:0000375;RNA splicing, via transesterification reactions;3.08208455322596e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.08208455322596e-15!GO:0030163;protein catabolic process;4.03354539413374e-15!GO:0044453;nuclear membrane part;5.23735284489688e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.23735284489688e-15!GO:0003954;NADH dehydrogenase activity;5.23735284489688e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.23735284489688e-15!GO:0031965;nuclear membrane;8.3837281987441e-15!GO:0006605;protein targeting;2.20445187085407e-14!GO:0044248;cellular catabolic process;2.33768051233951e-14!GO:0005761;mitochondrial ribosome;2.92517964558926e-14!GO:0000313;organellar ribosome;2.92517964558926e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.88430534140229e-14!GO:0005635;nuclear envelope;4.21931085567802e-14!GO:0000502;proteasome complex (sensu Eukaryota);4.8628046002113e-14!GO:0006732;coenzyme metabolic process;4.95520511887839e-14!GO:0005643;nuclear pore;5.25041080568063e-14!GO:0042254;ribosome biogenesis and assembly;1.09491701885122e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.09491701885122e-13!GO:0050657;nucleic acid transport;1.12482673644683e-13!GO:0051236;establishment of RNA localization;1.12482673644683e-13!GO:0050658;RNA transport;1.12482673644683e-13!GO:0006464;protein modification process;1.18411679393165e-13!GO:0005794;Golgi apparatus;1.3207111144223e-13!GO:0006399;tRNA metabolic process;1.40890444175149e-13!GO:0000279;M phase;1.41327109003742e-13!GO:0051082;unfolded protein binding;1.47872287547343e-13!GO:0006403;RNA localization;1.92151141048089e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.95401102916942e-13!GO:0042773;ATP synthesis coupled electron transport;1.95401102916942e-13!GO:0005783;endoplasmic reticulum;4.51479422890941e-13!GO:0030964;NADH dehydrogenase complex (quinone);4.76611573033388e-13!GO:0045271;respiratory chain complex I;4.76611573033388e-13!GO:0005747;mitochondrial respiratory chain complex I;4.76611573033388e-13!GO:0003743;translation initiation factor activity;9.14825223418959e-13!GO:0004386;helicase activity;1.15311207212617e-12!GO:0044432;endoplasmic reticulum part;1.28846495114625e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.46656308473575e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.715440504253e-12!GO:0046930;pore complex;1.71885033973334e-12!GO:0065002;intracellular protein transport across a membrane;2.27907926715673e-12!GO:0008639;small protein conjugating enzyme activity;3.83232161511589e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;4.16379211599158e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.26883907481944e-12!GO:0003712;transcription cofactor activity;5.07731400016471e-12!GO:0043687;post-translational protein modification;6.18389464835058e-12!GO:0051028;mRNA transport;7.42367983234487e-12!GO:0006413;translational initiation;8.94611226776821e-12!GO:0016604;nuclear body;9.96884431899061e-12!GO:0004842;ubiquitin-protein ligase activity;1.02161077078452e-11!GO:0006323;DNA packaging;1.43234339170888e-11!GO:0019787;small conjugating protein ligase activity;2.14575133764009e-11!GO:0006913;nucleocytoplasmic transport;2.3473726536292e-11!GO:0006461;protein complex assembly;3.30208670109535e-11!GO:0051169;nuclear transport;4.56848997462234e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.28073197880786e-11!GO:0008026;ATP-dependent helicase activity;7.15209594201759e-11!GO:0048193;Golgi vesicle transport;1.12031624155111e-10!GO:0006446;regulation of translational initiation;1.65896615834444e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.67896059055293e-10!GO:0051188;cofactor biosynthetic process;2.48189550026172e-10!GO:0016192;vesicle-mediated transport;2.69104392988974e-10!GO:0006366;transcription from RNA polymerase II promoter;3.41757984280602e-10!GO:0015986;ATP synthesis coupled proton transport;4.86354489416227e-10!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.86354489416227e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.95714386385781e-10!GO:0004812;aminoacyl-tRNA ligase activity;4.95714386385781e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.95714386385781e-10!GO:0008565;protein transporter activity;5.43061441450095e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.44754092107687e-10!GO:0016607;nuclear speck;7.39420338876464e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.19099534401055e-09!GO:0043038;amino acid activation;1.51145505793546e-09!GO:0006418;tRNA aminoacylation for protein translation;1.51145505793546e-09!GO:0043039;tRNA aminoacylation;1.51145505793546e-09!GO:0005789;endoplasmic reticulum membrane;2.15748487997867e-09!GO:0000785;chromatin;2.23463445801046e-09!GO:0006163;purine nucleotide metabolic process;2.30554785232358e-09!GO:0009108;coenzyme biosynthetic process;2.40271000258622e-09!GO:0016881;acid-amino acid ligase activity;2.77872566333334e-09!GO:0009259;ribonucleotide metabolic process;2.82192543560139e-09!GO:0043566;structure-specific DNA binding;2.86280098526603e-09!GO:0006364;rRNA processing;3.20794784864758e-09!GO:0003697;single-stranded DNA binding;3.81598185209302e-09!GO:0006164;purine nucleotide biosynthetic process;4.00439437274716e-09!GO:0016072;rRNA metabolic process;4.51449568439426e-09!GO:0006754;ATP biosynthetic process;5.00273348984194e-09!GO:0006753;nucleoside phosphate metabolic process;5.00273348984194e-09!GO:0005768;endosome;5.1381800524655e-09!GO:0009056;catabolic process;9.06005039546669e-09!GO:0019829;cation-transporting ATPase activity;1.02607611087355e-08!GO:0006752;group transfer coenzyme metabolic process;1.23062845063782e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.26501557895752e-08!GO:0016787;hydrolase activity;1.34469320811732e-08!GO:0009260;ribonucleotide biosynthetic process;1.38469384747368e-08!GO:0006261;DNA-dependent DNA replication;1.50862706984085e-08!GO:0016568;chromatin modification;1.52135501102827e-08!GO:0032446;protein modification by small protein conjugation;1.59242121180065e-08!GO:0009150;purine ribonucleotide metabolic process;1.68644542241389e-08!GO:0046034;ATP metabolic process;1.7237685539583e-08!GO:0016469;proton-transporting two-sector ATPase complex;1.79543289749953e-08!GO:0009055;electron carrier activity;1.93700879458192e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.31341638502142e-08!GO:0000074;regulation of progression through cell cycle;2.31341638502142e-08!GO:0016567;protein ubiquitination;2.34237277386459e-08!GO:0051726;regulation of cell cycle;2.41185827721281e-08!GO:0005667;transcription factor complex;2.83055260895813e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.93512563914287e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.3290897512572e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.3290897512572e-08!GO:0065004;protein-DNA complex assembly;3.93973861386728e-08!GO:0009060;aerobic respiration;4.18397850571747e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.12341390416698e-08!GO:0017038;protein import;5.37216503511207e-08!GO:0009141;nucleoside triphosphate metabolic process;5.5067409119705e-08!GO:0051329;interphase of mitotic cell cycle;6.23658471256842e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.79524191255936e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.79524191255936e-08!GO:0003713;transcription coactivator activity;1.15717709377232e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.26769289434429e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.26769289434429e-07!GO:0051325;interphase;1.42850583840516e-07!GO:0000775;chromosome, pericentric region;1.63108212371422e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.70702876548999e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.6595302731975e-07!GO:0016740;transferase activity;2.83119846956302e-07!GO:0045333;cellular respiration;4.11623995913243e-07!GO:0005793;ER-Golgi intermediate compartment;4.31001949440254e-07!GO:0000245;spliceosome assembly;4.68835155752037e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.70450207886497e-07!GO:0043623;cellular protein complex assembly;5.58482426749551e-07!GO:0005819;spindle;6.12671633918956e-07!GO:0045259;proton-transporting ATP synthase complex;6.53993536631767e-07!GO:0006084;acetyl-CoA metabolic process;6.59939564695058e-07!GO:0016563;transcription activator activity;6.76436385171086e-07!GO:0016779;nucleotidyltransferase activity;7.217359149387e-07!GO:0006333;chromatin assembly or disassembly;7.34138521319563e-07!GO:0015630;microtubule cytoskeleton;8.84937770001131e-07!GO:0006793;phosphorus metabolic process;8.84937770001131e-07!GO:0006796;phosphate metabolic process;8.84937770001131e-07!GO:0006099;tricarboxylic acid cycle;9.66453824406287e-07!GO:0046356;acetyl-CoA catabolic process;9.66453824406287e-07!GO:0005770;late endosome;1.25047923746621e-06!GO:0048475;coated membrane;1.27733312291537e-06!GO:0030117;membrane coat;1.27733312291537e-06!GO:0007005;mitochondrion organization and biogenesis;1.48375017603977e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.53750092102486e-06!GO:0003724;RNA helicase activity;1.70107053623667e-06!GO:0012501;programmed cell death;2.06923951542302e-06!GO:0008094;DNA-dependent ATPase activity;2.2862994039278e-06!GO:0000151;ubiquitin ligase complex;2.41278479032477e-06!GO:0009117;nucleotide metabolic process;2.41886469728329e-06!GO:0006915;apoptosis;2.72958254192246e-06!GO:0051427;hormone receptor binding;3.46188728019467e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.51464070562258e-06!GO:0015399;primary active transmembrane transporter activity;3.51464070562258e-06!GO:0016310;phosphorylation;4.16716798364587e-06!GO:0007051;spindle organization and biogenesis;4.47034916005136e-06!GO:0005773;vacuole;4.55498653269642e-06!GO:0051168;nuclear export;4.70373256726582e-06!GO:0044440;endosomal part;5.02975037264499e-06!GO:0010008;endosome membrane;5.02975037264499e-06!GO:0005813;centrosome;5.11300651848294e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.5727672951816e-06!GO:0051246;regulation of protein metabolic process;6.73713192457263e-06!GO:0005657;replication fork;6.88993105306314e-06!GO:0035257;nuclear hormone receptor binding;7.50931578162497e-06!GO:0005815;microtubule organizing center;8.25847189867337e-06!GO:0009109;coenzyme catabolic process;8.57951133136439e-06!GO:0044431;Golgi apparatus part;9.14011949457264e-06!GO:0003899;DNA-directed RNA polymerase activity;9.56019314915398e-06!GO:0051187;cofactor catabolic process;1.09438228975441e-05!GO:0005762;mitochondrial large ribosomal subunit;1.27299392903531e-05!GO:0000315;organellar large ribosomal subunit;1.27299392903531e-05!GO:0051170;nuclear import;1.46123145329241e-05!GO:0030120;vesicle coat;1.49033655892863e-05!GO:0030662;coated vesicle membrane;1.49033655892863e-05!GO:0008033;tRNA processing;1.93604947297319e-05!GO:0008219;cell death;2.00619114957223e-05!GO:0016265;death;2.00619114957223e-05!GO:0000075;cell cycle checkpoint;2.04353322241785e-05!GO:0019222;regulation of metabolic process;2.16530938961372e-05!GO:0050794;regulation of cellular process;2.28310434607518e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.64729529381063e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.39492724015774e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;3.42457247563316e-05!GO:0016853;isomerase activity;3.52727712929105e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.54747911367935e-05!GO:0006613;cotranslational protein targeting to membrane;3.63707211019093e-05!GO:0003690;double-stranded DNA binding;3.81652624024981e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.88910597543876e-05!GO:0008186;RNA-dependent ATPase activity;4.03261622297041e-05!GO:0006606;protein import into nucleus;4.31034829528218e-05!GO:0019899;enzyme binding;4.62807808073346e-05!GO:0003729;mRNA binding;4.77532482307755e-05!GO:0000323;lytic vacuole;5.02088484821316e-05!GO:0005764;lysosome;5.02088484821316e-05!GO:0005839;proteasome core complex (sensu Eukaryota);5.30660592618957e-05!GO:0043492;ATPase activity, coupled to movement of substances;5.58967197028497e-05!GO:0006818;hydrogen transport;5.59620092418133e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;6.89535360125707e-05!GO:0022890;inorganic cation transmembrane transporter activity;7.07454225548208e-05!GO:0015992;proton transport;9.19790775812512e-05!GO:0005769;early endosome;9.21451142960891e-05!GO:0008654;phospholipid biosynthetic process;9.27918579750809e-05!GO:0016741;transferase activity, transferring one-carbon groups;0.000101138980414249!GO:0006302;double-strand break repair;0.000106512663330933!GO:0000314;organellar small ribosomal subunit;0.000112199561881059!GO:0005763;mitochondrial small ribosomal subunit;0.000112199561881059!GO:0008168;methyltransferase activity;0.000125036919465403!GO:0048471;perinuclear region of cytoplasm;0.000125036919465403!GO:0006310;DNA recombination;0.000125412397601297!GO:0015980;energy derivation by oxidation of organic compounds;0.000129274203925368!GO:0004004;ATP-dependent RNA helicase activity;0.000132875464714037!GO:0004298;threonine endopeptidase activity;0.000136167402354112!GO:0006352;transcription initiation;0.000152477664514833!GO:0007040;lysosome organization and biogenesis;0.00017981780765289!GO:0005798;Golgi-associated vesicle;0.000194795366132049!GO:0000139;Golgi membrane;0.000200500483243443!GO:0016564;transcription repressor activity;0.000200500483243443!GO:0003682;chromatin binding;0.000207877190551912!GO:0005788;endoplasmic reticulum lumen;0.000219810200225892!GO:0043021;ribonucleoprotein binding;0.000226849659890299!GO:0031497;chromatin assembly;0.000226849659890299!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000229062472050201!GO:0043681;protein import into mitochondrion;0.000232524259009519!GO:0043069;negative regulation of programmed cell death;0.000234881631766406!GO:0051052;regulation of DNA metabolic process;0.00024767600305891!GO:0006334;nucleosome assembly;0.000249876816782662!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000253255679280899!GO:0000059;protein import into nucleus, docking;0.00026917964507332!GO:0016023;cytoplasmic membrane-bound vesicle;0.000271933196203943!GO:0043066;negative regulation of apoptosis;0.000284282256830994!GO:0031988;membrane-bound vesicle;0.000305640046795387!GO:0042802;identical protein binding;0.000342131165009625!GO:0032508;DNA duplex unwinding;0.00034531988117497!GO:0032392;DNA geometric change;0.00034531988117497!GO:0006091;generation of precursor metabolites and energy;0.000353598880448015!GO:0019752;carboxylic acid metabolic process;0.000353698338298564!GO:0004674;protein serine/threonine kinase activity;0.000380661620816686!GO:0006082;organic acid metabolic process;0.000392233531611088!GO:0009165;nucleotide biosynthetic process;0.000401993869693195!GO:0003684;damaged DNA binding;0.00041444357467845!GO:0031323;regulation of cellular metabolic process;0.000436855230141419!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000437045562682762!GO:0006916;anti-apoptosis;0.00045294327760462!GO:0006612;protein targeting to membrane;0.000470823650450169!GO:0045454;cell redox homeostasis;0.000485685243553867!GO:0016251;general RNA polymerase II transcription factor activity;0.000528757023619394!GO:0006268;DNA unwinding during replication;0.000531666544879049!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000532561442883772!GO:0005905;coated pit;0.000544154116109452!GO:0007033;vacuole organization and biogenesis;0.000548151232834748!GO:0031982;vesicle;0.000573966275964613!GO:0007059;chromosome segregation;0.000581551716202653!GO:0003678;DNA helicase activity;0.000583499418210751!GO:0003714;transcription corepressor activity;0.000608953076869305!GO:0006730;one-carbon compound metabolic process;0.000616675757755566!GO:0016363;nuclear matrix;0.000629396505020843!GO:0000049;tRNA binding;0.000654112542771858!GO:0044452;nucleolar part;0.000659050523011219!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000670667301124177!GO:0007006;mitochondrial membrane organization and biogenesis;0.000671170622575709!GO:0031410;cytoplasmic vesicle;0.000685944941637601!GO:0006405;RNA export from nucleus;0.000698333104123049!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000701246217762038!GO:0006414;translational elongation;0.000737812151984999!GO:0032259;methylation;0.000842736993601858!GO:0043414;biopolymer methylation;0.000871155056114057!GO:0005885;Arp2/3 protein complex;0.000887706961060789!GO:0006650;glycerophospholipid metabolic process;0.000900512923780045!GO:0000776;kinetochore;0.000967744410330506!GO:0031252;leading edge;0.000978131209922289!GO:0007052;mitotic spindle organization and biogenesis;0.00101385310015963!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00109246352368425!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00109246352368425!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00109246352368425!GO:0046474;glycerophospholipid biosynthetic process;0.0011459487259011!GO:0005684;U2-dependent spliceosome;0.00122713393748016!GO:0051920;peroxiredoxin activity;0.00123712262840542!GO:0008234;cysteine-type peptidase activity;0.00124933180276316!GO:0007265;Ras protein signal transduction;0.00129464078087492!GO:0030867;rough endoplasmic reticulum membrane;0.0013044792262314!GO:0007010;cytoskeleton organization and biogenesis;0.00132953001069104!GO:0016197;endosome transport;0.00136006381311206!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00137172951204812!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00137172951204812!GO:0015631;tubulin binding;0.0013763458895406!GO:0035258;steroid hormone receptor binding;0.00138462172755265!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0014106084622153!GO:0006611;protein export from nucleus;0.00142905972729311!GO:0007264;small GTPase mediated signal transduction;0.00143252377556293!GO:0006520;amino acid metabolic process;0.00154301363062913!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00163776156820187!GO:0016044;membrane organization and biogenesis;0.00170107303749428!GO:0030384;phosphoinositide metabolic process;0.00173844966578393!GO:0006383;transcription from RNA polymerase III promoter;0.00175885719129269!GO:0006284;base-excision repair;0.00182627262627823!GO:0030518;steroid hormone receptor signaling pathway;0.00182627262627823!GO:0030521;androgen receptor signaling pathway;0.0018614392694978!GO:0030880;RNA polymerase complex;0.00190689549319768!GO:0030119;AP-type membrane coat adaptor complex;0.00191083206453808!GO:0031324;negative regulation of cellular metabolic process;0.00193962542895947!GO:0006839;mitochondrial transport;0.00196344268868029!GO:0006626;protein targeting to mitochondrion;0.00202055517567427!GO:0030118;clathrin coat;0.00203828660352757!GO:0044262;cellular carbohydrate metabolic process;0.00210117290452645!GO:0016272;prefoldin complex;0.00211345552781074!GO:0006350;transcription;0.00218284068857698!GO:0006402;mRNA catabolic process;0.00218674298868799!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00219841856754921!GO:0004527;exonuclease activity;0.00247315924825855!GO:0000082;G1/S transition of mitotic cell cycle;0.00251909755960307!GO:0042981;regulation of apoptosis;0.00272496727396096!GO:0030131;clathrin adaptor complex;0.0030369983876387!GO:0043067;regulation of programmed cell death;0.00304804844409776!GO:0048500;signal recognition particle;0.00315104452730568!GO:0009451;RNA modification;0.00325847814256336!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00326400233433487!GO:0005669;transcription factor TFIID complex;0.00326867634907487!GO:0005791;rough endoplasmic reticulum;0.00330942836887619!GO:0046489;phosphoinositide biosynthetic process;0.00345194821746519!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00347721076874631!GO:0051252;regulation of RNA metabolic process;0.00356053975802817!GO:0030036;actin cytoskeleton organization and biogenesis;0.00357964830990483!GO:0031072;heat shock protein binding;0.003658606158894!GO:0000725;recombinational repair;0.00372205358720923!GO:0000724;double-strand break repair via homologous recombination;0.00372205358720923!GO:0000792;heterochromatin;0.00372205358720923!GO:0005774;vacuolar membrane;0.00376942992716832!GO:0008276;protein methyltransferase activity;0.00401369971236988!GO:0051789;response to protein stimulus;0.00425324713535776!GO:0006986;response to unfolded protein;0.00425324713535776!GO:0031901;early endosome membrane;0.00429980084892634!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00432548586097325!GO:0000428;DNA-directed RNA polymerase complex;0.00432548586097325!GO:0006401;RNA catabolic process;0.00443614738415995!GO:0005048;signal sequence binding;0.00448556173957178!GO:0030176;integral to endoplasmic reticulum membrane;0.00462901760677514!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00464891812182539!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00469288773519351!GO:0005637;nuclear inner membrane;0.00484831948576616!GO:0019843;rRNA binding;0.00499186985367288!GO:0004177;aminopeptidase activity;0.00527248906117086!GO:0051087;chaperone binding;0.00534610654092046!GO:0000228;nuclear chromosome;0.00542320255017848!GO:0043284;biopolymer biosynthetic process;0.0054808323878274!GO:0030132;clathrin coat of coated pit;0.00554781315304871!GO:0010468;regulation of gene expression;0.00556970868420405!GO:0003702;RNA polymerase II transcription factor activity;0.00560777732343597!GO:0030029;actin filament-based process;0.00570400060175781!GO:0000086;G2/M transition of mitotic cell cycle;0.00585871791423422!GO:0019867;outer membrane;0.0063079076107836!GO:0045786;negative regulation of progression through cell cycle;0.00640314599852904!GO:0031124;mRNA 3'-end processing;0.00644817188170461!GO:0006417;regulation of translation;0.00652694324858538!GO:0004518;nuclease activity;0.00654728464808642!GO:0031968;organelle outer membrane;0.00664748908470208!GO:0005525;GTP binding;0.0070706913343216!GO:0006270;DNA replication initiation;0.00712462681269786!GO:0008312;7S RNA binding;0.00720235938394055!GO:0050789;regulation of biological process;0.00721912893570598!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00741506463316285!GO:0045047;protein targeting to ER;0.00741506463316285!GO:0005741;mitochondrial outer membrane;0.00777764841350943!GO:0044437;vacuolar part;0.00779909366768385!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00791439533312338!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00808946667403301!GO:0033116;ER-Golgi intermediate compartment membrane;0.00830200076036902!GO:0000096;sulfur amino acid metabolic process;0.00831355146263494!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00831355146263494!GO:0008139;nuclear localization sequence binding;0.00833630068629971!GO:0046966;thyroid hormone receptor binding;0.00873848755415373!GO:0006497;protein amino acid lipidation;0.0091626667350456!GO:0030663;COPI coated vesicle membrane;0.00920154533553605!GO:0030126;COPI vesicle coat;0.00920154533553605!GO:0007088;regulation of mitosis;0.00934966614967363!GO:0006891;intra-Golgi vesicle-mediated transport;0.00955973264998513!GO:0046467;membrane lipid biosynthetic process;0.00955973264998513!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00957135129649348!GO:0003711;transcription elongation regulator activity;0.00985911565670543!GO:0042158;lipoprotein biosynthetic process;0.00994532020049009!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00994532020049009!GO:0015002;heme-copper terminal oxidase activity;0.00994532020049009!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00994532020049009!GO:0004129;cytochrome-c oxidase activity;0.00994532020049009!GO:0008017;microtubule binding;0.0100125268847316!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.010053333476799!GO:0065009;regulation of a molecular function;0.010053333476799!GO:0048487;beta-tubulin binding;0.0101285768298519!GO:0040029;regulation of gene expression, epigenetic;0.0101287998103974!GO:0006984;ER-nuclear signaling pathway;0.0101338007465096!GO:0006767;water-soluble vitamin metabolic process;0.0101338007465096!GO:0006595;polyamine metabolic process;0.010181372564058!GO:0031902;late endosome membrane;0.010511866305076!GO:0030522;intracellular receptor-mediated signaling pathway;0.0105671211896906!GO:0006338;chromatin remodeling;0.0105864848017004!GO:0043596;nuclear replication fork;0.0105934131282486!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0106493816433954!GO:0000922;spindle pole;0.0108107212613919!GO:0006275;regulation of DNA replication;0.0110822770619639!GO:0000118;histone deacetylase complex;0.0111117864723657!GO:0005832;chaperonin-containing T-complex;0.0115411478773569!GO:0006518;peptide metabolic process;0.0118243389042338!GO:0046483;heterocycle metabolic process;0.0120024567380544!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0122053447174114!GO:0009892;negative regulation of metabolic process;0.0124102028987841!GO:0017166;vinculin binding;0.0125997670412154!GO:0006378;mRNA polyadenylation;0.012638079408726!GO:0006376;mRNA splice site selection;0.0136187544822961!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0136187544822961!GO:0030137;COPI-coated vesicle;0.0138774368254712!GO:0004576;oligosaccharyl transferase activity;0.0141313254322956!GO:0005876;spindle microtubule;0.0146807124315275!GO:0030133;transport vesicle;0.0147242646350048!GO:0006289;nucleotide-excision repair;0.0149137305552832!GO:0051053;negative regulation of DNA metabolic process;0.0149137305552832!GO:0006643;membrane lipid metabolic process;0.0149137305552832!GO:0006505;GPI anchor metabolic process;0.0152555007628328!GO:0031570;DNA integrity checkpoint;0.0155323809749026!GO:0016859;cis-trans isomerase activity;0.015673031654405!GO:0003756;protein disulfide isomerase activity;0.016195400017227!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.016195400017227!GO:0051539;4 iron, 4 sulfur cluster binding;0.0162916849208107!GO:0032200;telomere organization and biogenesis;0.0162916849208107!GO:0000723;telomere maintenance;0.0162916849208107!GO:0006144;purine base metabolic process;0.0164641771863521!GO:0008287;protein serine/threonine phosphatase complex;0.0167963566122244!GO:0007093;mitotic cell cycle checkpoint;0.0168622439719875!GO:0005758;mitochondrial intermembrane space;0.0169221436327775!GO:0006541;glutamine metabolic process;0.017008645495264!GO:0004197;cysteine-type endopeptidase activity;0.0174854363788166!GO:0006506;GPI anchor biosynthetic process;0.0176921029021589!GO:0030027;lamellipodium;0.0177873668528682!GO:0007017;microtubule-based process;0.0178038526659097!GO:0046983;protein dimerization activity;0.0178567247239284!GO:0005996;monosaccharide metabolic process;0.0178567247239284!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0178831979604267!GO:0007021;tubulin folding;0.0178925163621338!GO:0006400;tRNA modification;0.0180878684119651!GO:0019318;hexose metabolic process;0.0182070018338089!GO:0042393;histone binding;0.0183809967691324!GO:0043022;ribosome binding;0.0186285778114426!GO:0006301;postreplication repair;0.0187501811086132!GO:0004003;ATP-dependent DNA helicase activity;0.0189136607111464!GO:0000339;RNA cap binding;0.0191341371190363!GO:0031123;RNA 3'-end processing;0.019143804032485!GO:0016491;oxidoreductase activity;0.019239884506221!GO:0008022;protein C-terminus binding;0.0192473640580409!GO:0045334;clathrin-coated endocytic vesicle;0.0192473640580409!GO:0005083;small GTPase regulator activity;0.019467393847387!GO:0000819;sister chromatid segregation;0.019626070869169!GO:0006644;phospholipid metabolic process;0.0198348373045246!GO:0000070;mitotic sister chromatid segregation;0.0200306783697959!GO:0000287;magnesium ion binding;0.0205139390378323!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0205139390378323!GO:0008250;oligosaccharyl transferase complex;0.0206431046331609!GO:0008536;Ran GTPase binding;0.0214281516869799!GO:0043601;nuclear replisome;0.0214281516869799!GO:0030894;replisome;0.0214281516869799!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0214281516869799!GO:0006519;amino acid and derivative metabolic process;0.0220689306448452!GO:0000152;nuclear ubiquitin ligase complex;0.0221684524240874!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0230100807400578!GO:0051059;NF-kappaB binding;0.0230745267831667!GO:0031529;ruffle organization and biogenesis;0.0236106901538467!GO:0008652;amino acid biosynthetic process;0.0237025707295677!GO:0000790;nuclear chromatin;0.0240013030749644!GO:0006892;post-Golgi vesicle-mediated transport;0.0241521772510734!GO:0000209;protein polyubiquitination;0.0242470106842352!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0243929261135789!GO:0000786;nucleosome;0.0245725788754796!GO:0006740;NADPH regeneration;0.0245789396136144!GO:0006098;pentose-phosphate shunt;0.0245789396136144!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.025109226653013!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0251620643426139!GO:0044438;microbody part;0.0255900627743123!GO:0044439;peroxisomal part;0.0255900627743123!GO:0016407;acetyltransferase activity;0.0257065275594084!GO:0008610;lipid biosynthetic process;0.0258679456624563!GO:0031326;regulation of cellular biosynthetic process;0.0262787998045684!GO:0050681;androgen receptor binding;0.0265275064080125!GO:0009112;nucleobase metabolic process;0.0265275064080125!GO:0005652;nuclear lamina;0.0277696055963422!GO:0006406;mRNA export from nucleus;0.0279269489901862!GO:0008097;5S rRNA binding;0.0283022570390525!GO:0031970;organelle envelope lumen;0.0295946402744126!GO:0043488;regulation of mRNA stability;0.0299077951305792!GO:0043487;regulation of RNA stability;0.0299077951305792!GO:0005663;DNA replication factor C complex;0.0299077951305792!GO:0030125;clathrin vesicle coat;0.030000965232809!GO:0030665;clathrin coated vesicle membrane;0.030000965232809!GO:0042770;DNA damage response, signal transduction;0.0304583070424186!GO:0006007;glucose catabolic process;0.0305013000842881!GO:0005874;microtubule;0.0308988206592889!GO:0032774;RNA biosynthetic process;0.0310377574116586!GO:0030641;cellular hydrogen ion homeostasis;0.0329157240046556!GO:0051540;metal cluster binding;0.0330741562950406!GO:0051536;iron-sulfur cluster binding;0.0330741562950406!GO:0030658;transport vesicle membrane;0.0333876262904894!GO:0009225;nucleotide-sugar metabolic process;0.0335779247827512!GO:0032561;guanyl ribonucleotide binding;0.0338678955836229!GO:0019001;guanyl nucleotide binding;0.0338678955836229!GO:0043433;negative regulation of transcription factor activity;0.0343882464541705!GO:0046519;sphingoid metabolic process;0.0351616427899242!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0354908595130757!GO:0044454;nuclear chromosome part;0.0357961004532963!GO:0006351;transcription, DNA-dependent;0.0362078625938302!GO:0000910;cytokinesis;0.036549528910558!GO:0022406;membrane docking;0.0369762211692601!GO:0048278;vesicle docking;0.0369762211692601!GO:0004563;beta-N-acetylhexosaminidase activity;0.0371598675484979!GO:0031903;microbody membrane;0.0371628733293929!GO:0005778;peroxisomal membrane;0.0371628733293929!GO:0046982;protein heterodimerization activity;0.0372004844910072!GO:0000793;condensed chromosome;0.0375370315472116!GO:0000123;histone acetyltransferase complex;0.0382237585378888!GO:0005099;Ras GTPase activator activity;0.0385376859144764!GO:0004185;serine carboxypeptidase activity;0.0386196738134642!GO:0035267;NuA4 histone acetyltransferase complex;0.0391116581156177!GO:0016408;C-acyltransferase activity;0.03923287377625!GO:0008553;hydrogen-exporting ATPase activity, phosphorylative mechanism;0.039728247986616!GO:0005975;carbohydrate metabolic process;0.0403861598050473!GO:0008320;protein transmembrane transporter activity;0.0404617873292705!GO:0008408;3'-5' exonuclease activity;0.0404617873292705!GO:0006607;NLS-bearing substrate import into nucleus;0.0409156373868181!GO:0006733;oxidoreduction coenzyme metabolic process;0.0415705784365476!GO:0009308;amine metabolic process;0.0415705784365476!GO:0005765;lysosomal membrane;0.041678455822695!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0419562615710551!GO:0006897;endocytosis;0.0421760697623257!GO:0010324;membrane invagination;0.0421760697623257!GO:0000781;chromosome, telomeric region;0.0422822987757071!GO:0007004;telomere maintenance via telomerase;0.0423621766203012!GO:0016860;intramolecular oxidoreductase activity;0.0426246826301508!GO:0008092;cytoskeletal protein binding;0.0426246826301508!GO:0005784;translocon complex;0.0432130132873644!GO:0031625;ubiquitin protein ligase binding;0.0432624209555526!GO:0008156;negative regulation of DNA replication;0.0433702086078024!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0433702086078024!GO:0010257;NADH dehydrogenase complex assembly;0.0433702086078024!GO:0033108;mitochondrial respiratory chain complex assembly;0.0433702086078024!GO:0004659;prenyltransferase activity;0.0433769435407166!GO:0051452;cellular pH reduction;0.0434734089178949!GO:0051453;regulation of cellular pH;0.0434734089178949!GO:0045851;pH reduction;0.0434734089178949!GO:0003924;GTPase activity;0.0434837376907134!GO:0031628;opioid receptor binding;0.0434837376907134!GO:0031852;mu-type opioid receptor binding;0.0434837376907134!GO:0030833;regulation of actin filament polymerization;0.0434837376907134!GO:0016481;negative regulation of transcription;0.0439596739512482!GO:0016791;phosphoric monoester hydrolase activity;0.0442697318377789!GO:0043189;H4/H2A histone acetyltransferase complex;0.0442697318377789!GO:0016884;carbon-nitrogen ligase activity, with glutamine as amido-N-donor;0.0446219951275607!GO:0006465;signal peptide processing;0.044626982175628!GO:0045767;regulation of anti-apoptosis;0.0450788300308701!GO:0008637;apoptotic mitochondrial changes;0.0456643562813401!GO:0030660;Golgi-associated vesicle membrane;0.0458858435540227!GO:0000119;mediator complex;0.0463106615170821!GO:0006306;DNA methylation;0.0467494325366605!GO:0006305;DNA alkylation;0.0467494325366605!GO:0042054;histone methyltransferase activity;0.0470117563738687!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0471988239465813!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0474533753902363!GO:0045039;protein import into mitochondrial inner membrane;0.0474533753902363!GO:0009889;regulation of biosynthetic process;0.048811114808613!GO:0003725;double-stranded RNA binding;0.0488379999582817!GO:0000178;exosome (RNase complex);0.0491277954616262!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0492048710504864!GO:0022884;macromolecule transmembrane transporter activity;0.0495578306015653!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0495578306015653 | |||
|sample_id=10698 | |sample_id=10698 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=pancreas | |sample_tissue=pancreas | ||
|top_motifs=TOPORS:2.87513811779;PITX1..3:2.4842468973;FOXP1:1.73242144753;bHLH_family:1.57794335599;VSX1,2:1.56970762863;SNAI1..3:1.41325675518;FOXQ1:1.2912118107;TEF:1.22446568867;AIRE:1.19755465671;ZEB1:1.17400047756;HOX{A6,A7,B6,B7}:1.09723547161;E2F1..5:1.05753368879;FOXM1:1.05139782388;PAX4:1.04928737819;ZBTB16:0.990391152417;HOXA9_MEIS1:0.935620339192;IKZF1:0.844094923059;HIF1A:0.833891922737;FOXD3:0.803112310614;FOX{I1,J2}:0.789050078609;IKZF2:0.762564332699;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.716213564509;ALX1:0.676631866383;OCT4_SOX2{dimer}:0.672014179587;FOX{F1,F2,J1}:0.663564186445;HOX{A5,B5}:0.657859472386;LHX3,4:0.64857732707;PAX1,9:0.6162936575;MYOD1:0.538560627503;NKX3-2:0.535614319386;ESRRA:0.479415460316;STAT5{A,B}:0.477218749087;CDX1,2,4:0.464197708787;GATA6:0.462155114697;CRX:0.455515533944;RORA:0.438316621382;CUX2:0.433059206226;TEAD1:0.429603580746;EVI1:0.421910438289;FOXN1:0.408093278866;TBX4,5:0.404891478644;MYB:0.398373739473;LMO2:0.394929178747;POU2F1..3:0.389345149194;ZNF143:0.387666286108;BREu{core}:0.34628797615;SREBF1,2:0.294252489225;ZNF384:0.281626640546;ELK1,4_GABP{A,B1}:0.273566346526;FOXL1:0.263975033505;GATA4:0.254527153289;CDC5L:0.247831290307;PAX5:0.242032963446;POU6F1:0.238003612103;TFDP1:0.198989799308;NRF1:0.17009164571;RBPJ:0.1505093353;NFY{A,B,C}:0.145007247263;HNF1A:0.110302756179;TP53:0.106736363103;PRRX1,2:0.105501614753;HLF:0.102236152487;FOXA2:0.102049493558;ZFP161:0.0972909791886;HNF4A_NR2F1,2:0.0926170261622;POU1F1:0.0819570674342;MYBL2:0.0606976712447;PBX1:0.0569320947026;GFI1:0.00397541940763;SOX2:-0.0265085904931;ADNP_IRX_SIX_ZHX:-0.0266318343592;NKX2-3_NKX2-5:-0.0465735267348;SPZ1:-0.0506556787515;NKX2-1,4:-0.055372409323;FOXO1,3,4:-0.0596295371927;NR1H4:-0.0602660375817;SP1:-0.0702922755544;POU3F1..4:-0.0897183470815;MED-1{core}:-0.0946588395434;NR5A1,2:-0.105465458189;HOX{A4,D4}:-0.110762576475;DMAP1_NCOR{1,2}_SMARC:-0.11102420719;FOXP3:-0.124194583699;LEF1_TCF7_TCF7L1,2:-0.127562321605;NFE2L2:-0.134666668891;ONECUT1,2:-0.143158714429;SOX17:-0.144071658024;XBP1:-0.149362791325;TAL1_TCF{3,4,12}:-0.15254528108;KLF4:-0.176529794863;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.177372930895;UFEwm:-0.196256469586;SOX5:-0.217492568285;NKX6-1,2:-0.227812361953;NANOG:-0.240026609822;PAX2:-0.249003441803;ATF4:-0.268870790041;GZF1:-0.275478703276;TFAP2{A,C}:-0.286591925929;PAX6:-0.30280593919;EN1,2:-0.308482619052;ARID5B:-0.31267969442;RFX2..5_RFXANK_RFXAP:-0.313997922872;XCPE1{core}:-0.32106427007;FOX{D1,D2}:-0.325511848103;SOX{8,9,10}:-0.327290322144;ZIC1..3:-0.348964837139;GCM1,2:-0.356772613726;CEBPA,B_DDIT3:-0.38924783548;HMGA1,2:-0.394884172694;YY1:-0.397092408278;PAX8:-0.40658019648;ELF1,2,4:-0.41619261935;FOS_FOS{B,L1}_JUN{B,D}:-0.426962798498;PDX1:-0.430688678267;BPTF:-0.447078181214;STAT1,3:-0.464441427066;ZNF238:-0.471327123293;AHR_ARNT_ARNT2:-0.472705784442;ZNF148:-0.488140652069;SPIB:-0.505309152208;NFKB1_REL_RELA:-0.523592862098;BACH2:-0.538190710144;NFE2:-0.540759632445;EBF1:-0.541347686289;NKX3-1:-0.545608984266;MEF2{A,B,C,D}:-0.549702105311;ATF2:-0.559584917678;ALX4:-0.564922979611;NFIX:-0.581677133064;GTF2A1,2:-0.591495530368;CREB1:-0.593806157896;FOSL2:-0.604290991456;ATF5_CREB3:-0.613855983829;SPI1:-0.620362519598;TFAP2B:-0.62238750905;HBP1_HMGB_SSRP1_UBTF:-0.639832250249;ETS1,2:-0.644241137173;TFAP4:-0.649761228792;HMX1:-0.659549182845;PPARG:-0.666987891213;GTF2I:-0.67638710829;TGIF1:-0.683000185869;NFE2L1:-0.691068928696;RUNX1..3:-0.750284041857;EGR1..3:-0.755055268117;AR:-0.757182420553;RXR{A,B,G}:-0.766352181761;TLX2:-0.775161102198;MAZ:-0.783933164829;ZBTB6:-0.801395755708;MTF1:-0.819522064461;PAX3,7:-0.855498198486;STAT2,4,6:-0.857445422018;TFCP2:-0.921759611729;DBP:-0.94820195056;REST:-0.951637171688;IRF7:-0.961554362055;PATZ1:-0.961608938293;MYFfamily:-0.977627932199;PRDM1:-0.994800146444;NKX2-2,8:-0.998279324335;RFX1:-1.0271433231;HAND1,2:-1.03609724222;ESR1:-1.05107985705;NANOG{mouse}:-1.0576045061;GFI1B:-1.06208043271;NFIL3:-1.06208820182;HES1:-1.11439619304;POU5F1:-1.11677406592;MAFB:-1.15583236524;RREB1:-1.16964863615;MTE{core}:-1.17391592798;MZF1:-1.17638342235;SRF:-1.18483929615;HIC1:-1.19599331846;ZNF423:-1.20364074052;RXRA_VDR{dimer}:-1.23553376803;TLX1..3_NFIC{dimer}:-1.24097360253;IRF1,2:-1.28075701635;NHLH1,2:-1.2849369321;HSF1,2:-1.32348661747;NR6A1:-1.33556179321;JUN:-1.41473115114;T:-1.43602490369;EP300:-1.45932477492;ATF6:-1.4696886887;NR3C1:-1.47668915957;GLI1..3:-1.51388246454;NFATC1..3:-1.51916611333;TBP:-1.57472151791;SMAD1..7,9:-1.79410721509 | |top_motifs=TOPORS:2.87513811779;PITX1..3:2.4842468973;FOXP1:1.73242144753;bHLH_family:1.57794335599;VSX1,2:1.56970762863;SNAI1..3:1.41325675518;FOXQ1:1.2912118107;TEF:1.22446568867;AIRE:1.19755465671;ZEB1:1.17400047756;HOX{A6,A7,B6,B7}:1.09723547161;E2F1..5:1.05753368879;FOXM1:1.05139782388;PAX4:1.04928737819;ZBTB16:0.990391152417;HOXA9_MEIS1:0.935620339192;IKZF1:0.844094923059;HIF1A:0.833891922737;FOXD3:0.803112310614;FOX{I1,J2}:0.789050078609;IKZF2:0.762564332699;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.716213564509;ALX1:0.676631866383;OCT4_SOX2{dimer}:0.672014179587;FOX{F1,F2,J1}:0.663564186445;HOX{A5,B5}:0.657859472386;LHX3,4:0.64857732707;PAX1,9:0.6162936575;MYOD1:0.538560627503;NKX3-2:0.535614319386;ESRRA:0.479415460316;STAT5{A,B}:0.477218749087;CDX1,2,4:0.464197708787;GATA6:0.462155114697;CRX:0.455515533944;RORA:0.438316621382;CUX2:0.433059206226;TEAD1:0.429603580746;EVI1:0.421910438289;FOXN1:0.408093278866;TBX4,5:0.404891478644;MYB:0.398373739473;LMO2:0.394929178747;POU2F1..3:0.389345149194;ZNF143:0.387666286108;BREu{core}:0.34628797615;SREBF1,2:0.294252489225;ZNF384:0.281626640546;ELK1,4_GABP{A,B1}:0.273566346526;FOXL1:0.263975033505;GATA4:0.254527153289;CDC5L:0.247831290307;PAX5:0.242032963446;POU6F1:0.238003612103;TFDP1:0.198989799308;NRF1:0.17009164571;RBPJ:0.1505093353;NFY{A,B,C}:0.145007247263;HNF1A:0.110302756179;TP53:0.106736363103;PRRX1,2:0.105501614753;HLF:0.102236152487;FOXA2:0.102049493558;ZFP161:0.0972909791886;HNF4A_NR2F1,2:0.0926170261622;POU1F1:0.0819570674342;MYBL2:0.0606976712447;PBX1:0.0569320947026;GFI1:0.00397541940763;SOX2:-0.0265085904931;ADNP_IRX_SIX_ZHX:-0.0266318343592;NKX2-3_NKX2-5:-0.0465735267348;SPZ1:-0.0506556787515;NKX2-1,4:-0.055372409323;FOXO1,3,4:-0.0596295371927;NR1H4:-0.0602660375817;SP1:-0.0702922755544;POU3F1..4:-0.0897183470815;MED-1{core}:-0.0946588395434;NR5A1,2:-0.105465458189;HOX{A4,D4}:-0.110762576475;DMAP1_NCOR{1,2}_SMARC:-0.11102420719;FOXP3:-0.124194583699;LEF1_TCF7_TCF7L1,2:-0.127562321605;NFE2L2:-0.134666668891;ONECUT1,2:-0.143158714429;SOX17:-0.144071658024;XBP1:-0.149362791325;TAL1_TCF{3,4,12}:-0.15254528108;KLF4:-0.176529794863;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.177372930895;UFEwm:-0.196256469586;SOX5:-0.217492568285;NKX6-1,2:-0.227812361953;NANOG:-0.240026609822;PAX2:-0.249003441803;ATF4:-0.268870790041;GZF1:-0.275478703276;TFAP2{A,C}:-0.286591925929;PAX6:-0.30280593919;EN1,2:-0.308482619052;ARID5B:-0.31267969442;RFX2..5_RFXANK_RFXAP:-0.313997922872;XCPE1{core}:-0.32106427007;FOX{D1,D2}:-0.325511848103;SOX{8,9,10}:-0.327290322144;ZIC1..3:-0.348964837139;GCM1,2:-0.356772613726;CEBPA,B_DDIT3:-0.38924783548;HMGA1,2:-0.394884172694;YY1:-0.397092408278;PAX8:-0.40658019648;ELF1,2,4:-0.41619261935;FOS_FOS{B,L1}_JUN{B,D}:-0.426962798498;PDX1:-0.430688678267;BPTF:-0.447078181214;STAT1,3:-0.464441427066;ZNF238:-0.471327123293;AHR_ARNT_ARNT2:-0.472705784442;ZNF148:-0.488140652069;SPIB:-0.505309152208;NFKB1_REL_RELA:-0.523592862098;BACH2:-0.538190710144;NFE2:-0.540759632445;EBF1:-0.541347686289;NKX3-1:-0.545608984266;MEF2{A,B,C,D}:-0.549702105311;ATF2:-0.559584917678;ALX4:-0.564922979611;NFIX:-0.581677133064;GTF2A1,2:-0.591495530368;CREB1:-0.593806157896;FOSL2:-0.604290991456;ATF5_CREB3:-0.613855983829;SPI1:-0.620362519598;TFAP2B:-0.62238750905;HBP1_HMGB_SSRP1_UBTF:-0.639832250249;ETS1,2:-0.644241137173;TFAP4:-0.649761228792;HMX1:-0.659549182845;PPARG:-0.666987891213;GTF2I:-0.67638710829;TGIF1:-0.683000185869;NFE2L1:-0.691068928696;RUNX1..3:-0.750284041857;EGR1..3:-0.755055268117;AR:-0.757182420553;RXR{A,B,G}:-0.766352181761;TLX2:-0.775161102198;MAZ:-0.783933164829;ZBTB6:-0.801395755708;MTF1:-0.819522064461;PAX3,7:-0.855498198486;STAT2,4,6:-0.857445422018;TFCP2:-0.921759611729;DBP:-0.94820195056;REST:-0.951637171688;IRF7:-0.961554362055;PATZ1:-0.961608938293;MYFfamily:-0.977627932199;PRDM1:-0.994800146444;NKX2-2,8:-0.998279324335;RFX1:-1.0271433231;HAND1,2:-1.03609724222;ESR1:-1.05107985705;NANOG{mouse}:-1.0576045061;GFI1B:-1.06208043271;NFIL3:-1.06208820182;HES1:-1.11439619304;POU5F1:-1.11677406592;MAFB:-1.15583236524;RREB1:-1.16964863615;MTE{core}:-1.17391592798;MZF1:-1.17638342235;SRF:-1.18483929615;HIC1:-1.19599331846;ZNF423:-1.20364074052;RXRA_VDR{dimer}:-1.23553376803;TLX1..3_NFIC{dimer}:-1.24097360253;IRF1,2:-1.28075701635;NHLH1,2:-1.2849369321;HSF1,2:-1.32348661747;NR6A1:-1.33556179321;JUN:-1.41473115114;T:-1.43602490369;EP300:-1.45932477492;ATF6:-1.4696886887;NR3C1:-1.47668915957;GLI1..3:-1.51388246454;NFATC1..3:-1.51916611333;TBP:-1.57472151791;SMAD1..7,9:-1.79410721509 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10698-109G5;search_select_hide=table117:FF:10698-109G5 | |||
}} | }} | ||
Latest revision as of 14:33, 3 June 2020
| Name: | pancreatic carcinoma cell line:NOR-P1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11832 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11832
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11832
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0442 |
| 10 | 10 | 0.345 |
| 100 | 100 | 0.0426 |
| 101 | 101 | 0.248 |
| 102 | 102 | 0.668 |
| 103 | 103 | 0.136 |
| 104 | 104 | 0.309 |
| 105 | 105 | 0.998 |
| 106 | 106 | 0.902 |
| 107 | 107 | 0.425 |
| 108 | 108 | 0.339 |
| 109 | 109 | 0.162 |
| 11 | 11 | 0.494 |
| 110 | 110 | 0.131 |
| 111 | 111 | 0.408 |
| 112 | 112 | 0.544 |
| 113 | 113 | 0.153 |
| 114 | 114 | 0.838 |
| 115 | 115 | 0.937 |
| 116 | 116 | 0.626 |
| 117 | 117 | 0.0359 |
| 118 | 118 | 0.181 |
| 119 | 119 | 0.137 |
| 12 | 12 | 0.989 |
| 120 | 120 | 0.685 |
| 121 | 121 | 0.962 |
| 122 | 122 | 0.998 |
| 123 | 123 | 1.46031e-4 |
| 124 | 124 | 0.839 |
| 125 | 125 | 0.735 |
| 126 | 126 | 0.824 |
| 127 | 127 | 0.34 |
| 128 | 128 | 0.846 |
| 129 | 129 | 0.871 |
| 13 | 13 | 0.00263 |
| 130 | 130 | 0.954 |
| 131 | 131 | 0.599 |
| 132 | 132 | 0.817 |
| 133 | 133 | 5.29346e-4 |
| 134 | 134 | 0.49 |
| 135 | 135 | 0.0605 |
| 136 | 136 | 0.0466 |
| 137 | 137 | 0.0471 |
| 138 | 138 | 0.765 |
| 139 | 139 | 0.332 |
| 14 | 14 | 0.479 |
| 140 | 140 | 0.164 |
| 141 | 141 | 0.293 |
| 142 | 142 | 0.946 |
| 143 | 143 | 0.0584 |
| 144 | 144 | 0.557 |
| 145 | 145 | 0.85 |
| 146 | 146 | 0.547 |
| 147 | 147 | 0.524 |
| 148 | 148 | 0.645 |
| 149 | 149 | 0.908 |
| 15 | 15 | 0.67 |
| 150 | 150 | 0.881 |
| 151 | 151 | 0.599 |
| 152 | 152 | 0.294 |
| 153 | 153 | 0.748 |
| 154 | 154 | 0.493 |
| 155 | 155 | 0.407 |
| 156 | 156 | 0.362 |
| 157 | 157 | 0.239 |
| 158 | 158 | 0.651 |
| 159 | 159 | 0.875 |
| 16 | 16 | 0.267 |
| 160 | 160 | 0.788 |
| 161 | 161 | 0.506 |
| 162 | 162 | 0.222 |
| 163 | 163 | 0.465 |
| 164 | 164 | 0.44 |
| 165 | 165 | 0.521 |
| 166 | 166 | 0.429 |
| 167 | 167 | 0.299 |
| 168 | 168 | 0.147 |
| 169 | 169 | 0.393 |
| 17 | 17 | 0.346 |
| 18 | 18 | 0.921 |
| 19 | 19 | 0.57 |
| 2 | 2 | 0.203 |
| 20 | 20 | 0.14 |
| 21 | 21 | 0.138 |
| 22 | 22 | 0.829 |
| 23 | 23 | 0.603 |
| 24 | 24 | 0.794 |
| 25 | 25 | 0.492 |
| 26 | 26 | 0.0472 |
| 27 | 27 | 0.468 |
| 28 | 28 | 0.796 |
| 29 | 29 | 0.197 |
| 3 | 3 | 0.402 |
| 30 | 30 | 0.484 |
| 31 | 31 | 0.905 |
| 32 | 32 | 0.4 |
| 33 | 33 | 0.741 |
| 34 | 34 | 0.468 |
| 35 | 35 | 0.798 |
| 36 | 36 | 0.0751 |
| 37 | 37 | 0.628 |
| 38 | 38 | 0.625 |
| 39 | 39 | 0.417 |
| 4 | 4 | 0.707 |
| 40 | 40 | 0.0744 |
| 41 | 41 | 0.0954 |
| 42 | 42 | 0.391 |
| 43 | 43 | 0.675 |
| 44 | 44 | 0.692 |
| 45 | 45 | 0.882 |
| 46 | 46 | 0.493 |
| 47 | 47 | 0.212 |
| 48 | 48 | 0.291 |
| 49 | 49 | 0.101 |
| 5 | 5 | 0.947 |
| 50 | 50 | 0.83 |
| 51 | 51 | 0.794 |
| 52 | 52 | 0.843 |
| 53 | 53 | 0.0874 |
| 54 | 54 | 0.861 |
| 55 | 55 | 0.979 |
| 56 | 56 | 0.751 |
| 57 | 57 | 0.016 |
| 58 | 58 | 0.315 |
| 59 | 59 | 0.385 |
| 6 | 6 | 0.204 |
| 60 | 60 | 0.85 |
| 61 | 61 | 0.318 |
| 62 | 62 | 0.328 |
| 63 | 63 | 0.887 |
| 64 | 64 | 0.414 |
| 65 | 65 | 0.666 |
| 66 | 66 | 0.307 |
| 67 | 67 | 0.657 |
| 68 | 68 | 0.206 |
| 69 | 69 | 0.431 |
| 7 | 7 | 0.0789 |
| 70 | 70 | 0.571 |
| 71 | 71 | 0.372 |
| 72 | 72 | 0.981 |
| 73 | 73 | 0.611 |
| 74 | 74 | 0.428 |
| 75 | 75 | 0.211 |
| 76 | 76 | 0.0386 |
| 77 | 77 | 0.789 |
| 78 | 78 | 0.00216 |
| 79 | 79 | 0.252 |
| 8 | 8 | 0.86 |
| 80 | 80 | 0.109 |
| 81 | 81 | 0.897 |
| 82 | 82 | 0.924 |
| 83 | 83 | 0.998 |
| 84 | 84 | 0.315 |
| 85 | 85 | 0.991 |
| 86 | 86 | 0.493 |
| 87 | 87 | 0.28 |
| 88 | 88 | 0.721 |
| 89 | 89 | 0.0747 |
| 9 | 9 | 0.105 |
| 90 | 90 | 0.256 |
| 91 | 91 | 0.323 |
| 92 | 92 | 0.638 |
| 93 | 93 | 0.491 |
| 94 | 94 | 0.835 |
| 95 | 95 | 0.199 |
| 96 | 96 | 0.947 |
| 97 | 97 | 0.724 |
| 98 | 98 | 0.678 |
| 99 | 99 | 0.968 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11832
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:1798 pancreatic endocrine carcinoma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0103533 NOR-P1 cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000083 (epithelial cell of pancreas)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
1799 (islet cell tumor)
0050687 (cell type cancer)
305 (carcinoma)
170 (endocrine gland cancer)
10165 (endocrine pancreas cancer)
1793 (pancreatic cancer)
1798 (pancreatic endocrine carcinoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001264 (pancreas)
0002100 (trunk)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002323 (body cavity)
0005177 (trunk region element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0000949 (endocrine system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100794 (pancreatic cancer cell line sample)
0103533 (NOR-P1 cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)
