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{{f5samples
{{f5samples
|id=FF:10631-108I1
|DRA_sample_Accession=CAGE@SAMD00005068
|name=diffuse large B-cell lymphoma cell line:CTB-1
|accession_numbers=CAGE;DRX007867;DRR008739;DRZ000164;DRZ001549;DRZ011514;DRZ012899
|sample_id=10631
|ancestors_in_anatomy_facet=
|rna_tube_id=108I1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236,CL:0000785,CL:0000819
|rna_box=108
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:0060058,DOID:14566,DOID:0060083,DOID:0060073,DOID:8675
|rna_position=I1
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100104,FF:0101518,FF:0102521
|sample_cell_lot=
|comment=
|sample_cell_catalog=RCB1316
|created_by=
|sample_company=RIKEN Bioresource centre
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000954
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=70
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=2.15
|rna_od260/280=2.1
|sample_cell_type=b cell
|sample_cell_line=CTB-1
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=diffuse large B-cell lymphoma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=84.86602
|rna_concentration=1.80566
|sample_note=
|profile_hcage=CNhs11741,LSID819,release009,COMPLETED
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|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000236,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000785,CL:0000816,CL:0000817,CL:0000818,CL:0000819,CL:0000826,CL:0000837,CL:0000838,CL:0000945,CL:0000954,CL:0000955,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=DOID:0050686,DOID:0060058,DOID:0060073,DOID:0060083,DOID:14566,DOID:162,DOID:2531,DOID:4,DOID:8675
|sample_description=
|fonse_cell_line=FF:0100104
|fonse_cell_line=FF:0100104
|fonse_cell_line_closure=FF:0100104
|fonse_cell_line_closure=FF:0100104
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|comment=
|created_by=
|creation_date=
|def=
|has_quality=
|has_quality=
|is_a=CL:0000819;;EFO:0002091;;FF:0000003;;FF:0000210;;FF:0102521
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/diffuse%2520large%2520B-cell%2520lymphoma%2520cell%2520line%253aCTB-1.CNhs11741.10631-108I1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/diffuse%2520large%2520B-cell%2520lymphoma%2520cell%2520line%253aCTB-1.CNhs11741.10631-108I1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/diffuse%2520large%2520B-cell%2520lymphoma%2520cell%2520line%253aCTB-1.CNhs11741.10631-108I1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/diffuse%2520large%2520B-cell%2520lymphoma%2520cell%2520line%253aCTB-1.CNhs11741.10631-108I1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/diffuse%2520large%2520B-cell%2520lymphoma%2520cell%2520line%253aCTB-1.CNhs11741.10631-108I1.hg38.nobarcode.ctss.bed.gz
|id=FF:10631-108I1
|is_a=CL:0000819;;EFO:0002091;;FF:0000210;;FF:0102521
|is_obsolete=
|library_id=CNhs11741
|library_id_phase_based=2:CNhs11741
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10631
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10631
|name=diffuse large B-cell lymphoma cell line:CTB-1
|namespace=FANTOM5
|namespace=FANTOM5
|part_of=
|part_of=
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|profile_hcage=CNhs11741,LSID819,release009,COMPLETED
|profile_rnaseq=
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|rna_box=108
|rna_catalog_number=
|rna_concentration=1.80566
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.15
|rna_od260/280=2.1
|rna_position=I1
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=108I1
|rna_weight_ug=84.86602
|sample_age=70
|sample_category=cell lines
|sample_cell_catalog=RCB1316
|sample_cell_line=CTB-1
|sample_cell_lot=
|sample_cell_type=b cell
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=diffuse large B-cell lymphoma
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.16844357848456e-276!GO:0043227;membrane-bound organelle;5.7560991611591e-248!GO:0043231;intracellular membrane-bound organelle;1.26030067949396e-247!GO:0043226;organelle;7.97499365833923e-239!GO:0043229;intracellular organelle;2.28907477307141e-238!GO:0044422;organelle part;1.15397634928947e-172!GO:0044446;intracellular organelle part;8.57293980871529e-171!GO:0005737;cytoplasm;7.31810657716857e-154!GO:0005634;nucleus;6.27846368243805e-137!GO:0032991;macromolecular complex;2.5046267765271e-135!GO:0044237;cellular metabolic process;1.22636404458139e-124!GO:0044238;primary metabolic process;2.39375722839053e-120!GO:0044428;nuclear part;1.45740888429585e-117!GO:0043170;macromolecule metabolic process;6.61549963521756e-112!GO:0030529;ribonucleoprotein complex;2.5072147473962e-110!GO:0044444;cytoplasmic part;2.46418793429515e-109!GO:0043233;organelle lumen;3.99256759469256e-103!GO:0031974;membrane-enclosed lumen;3.99256759469256e-103!GO:0003723;RNA binding;5.76771280857918e-99!GO:0005739;mitochondrion;9.07235936528527e-83!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.45727587407397e-79!GO:0043283;biopolymer metabolic process;3.63782736358216e-77!GO:0006396;RNA processing;3.65906532862611e-76!GO:0031981;nuclear lumen;8.45003240030781e-71!GO:0010467;gene expression;1.29790799365447e-70!GO:0043234;protein complex;3.30756112843635e-69!GO:0006259;DNA metabolic process;3.54103248632791e-63!GO:0006412;translation;5.01541652141201e-63!GO:0005515;protein binding;2.58687331489766e-61!GO:0005840;ribosome;5.06414634081666e-61!GO:0044429;mitochondrial part;7.71124381949034e-58!GO:0016071;mRNA metabolic process;2.30499965512403e-56!GO:0003676;nucleic acid binding;8.36158385480493e-54!GO:0003735;structural constituent of ribosome;2.03718708755364e-52!GO:0031967;organelle envelope;8.30379796796784e-51!GO:0031975;envelope;2.06985156122778e-50!GO:0008380;RNA splicing;4.58505065046646e-50!GO:0006397;mRNA processing;3.83680559145092e-49!GO:0044249;cellular biosynthetic process;6.60400483628494e-48!GO:0019538;protein metabolic process;1.14269178897068e-46!GO:0033279;ribosomal subunit;2.09599953475483e-45!GO:0005654;nucleoplasm;8.94917611951635e-45!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.12355263812739e-44!GO:0009058;biosynthetic process;7.70181637384773e-44!GO:0006996;organelle organization and biogenesis;1.69671143486582e-43!GO:0043228;non-membrane-bound organelle;1.97674359494407e-42!GO:0043232;intracellular non-membrane-bound organelle;1.97674359494407e-42!GO:0044267;cellular protein metabolic process;2.68803295000856e-42!GO:0044260;cellular macromolecule metabolic process;7.75727421730043e-42!GO:0009059;macromolecule biosynthetic process;1.19683837800354e-41!GO:0006974;response to DNA damage stimulus;1.26954572332229e-41!GO:0031090;organelle membrane;2.41518716449042e-41!GO:0007049;cell cycle;2.77333817243992e-40!GO:0033036;macromolecule localization;1.39475514636361e-39!GO:0015031;protein transport;5.97510284151659e-38!GO:0016043;cellular component organization and biogenesis;8.24874881746332e-38!GO:0005681;spliceosome;5.62488986841855e-37!GO:0016070;RNA metabolic process;1.09882788704642e-36!GO:0065003;macromolecular complex assembly;4.79930979093152e-36!GO:0005829;cytosol;5.81838650955119e-36!GO:0006281;DNA repair;6.65331265968845e-36!GO:0005694;chromosome;9.11183323454907e-36!GO:0045184;establishment of protein localization;1.61375917922452e-34!GO:0008104;protein localization;1.72124130596532e-34!GO:0044451;nucleoplasm part;2.36681188444135e-34!GO:0000166;nucleotide binding;4.74135175408015e-34!GO:0022402;cell cycle process;8.87270927434035e-34!GO:0005740;mitochondrial envelope;1.21436395702115e-33!GO:0046907;intracellular transport;3.67403758112466e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.25768107101701e-32!GO:0019866;organelle inner membrane;4.19119874881636e-32!GO:0022607;cellular component assembly;9.1575738979202e-32!GO:0000278;mitotic cell cycle;9.43907226285714e-32!GO:0031966;mitochondrial membrane;2.40685604199247e-31!GO:0044427;chromosomal part;3.37058622168908e-30!GO:0005743;mitochondrial inner membrane;6.30941839447346e-30!GO:0022403;cell cycle phase;2.91293472289629e-29!GO:0044445;cytosolic part;4.1269418027262e-29!GO:0031980;mitochondrial lumen;4.94393455362067e-29!GO:0005759;mitochondrial matrix;4.94393455362067e-29!GO:0006886;intracellular protein transport;1.55769288991823e-28!GO:0005730;nucleolus;1.19890232957178e-27!GO:0009719;response to endogenous stimulus;1.35624265940061e-27!GO:0051276;chromosome organization and biogenesis;1.60992434745995e-27!GO:0000087;M phase of mitotic cell cycle;9.1305322434503e-27!GO:0007067;mitosis;3.84621270730143e-26!GO:0006260;DNA replication;4.66998918500412e-26!GO:0000279;M phase;2.92595345201299e-25!GO:0044455;mitochondrial membrane part;3.73654596614524e-24!GO:0044265;cellular macromolecule catabolic process;4.22892988312033e-24!GO:0006119;oxidative phosphorylation;5.7962374909927e-24!GO:0005524;ATP binding;6.46199959308769e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.48912431949755e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;1.13386820129675e-23!GO:0016462;pyrophosphatase activity;1.14836157285006e-23!GO:0016874;ligase activity;1.86350351750702e-23!GO:0015934;large ribosomal subunit;1.92365496698932e-23!GO:0032559;adenyl ribonucleotide binding;2.17097194019478e-23!GO:0017111;nucleoside-triphosphatase activity;2.94776542216936e-23!GO:0015935;small ribosomal subunit;3.16413438458251e-23!GO:0051301;cell division;3.70062177001981e-23!GO:0032553;ribonucleotide binding;5.9707970459813e-23!GO:0032555;purine ribonucleotide binding;5.9707970459813e-23!GO:0030554;adenyl nucleotide binding;1.1852463857453e-22!GO:0042254;ribosome biogenesis and assembly;1.19042703354808e-22!GO:0017076;purine nucleotide binding;1.71981617434123e-22!GO:0051649;establishment of cellular localization;3.34577665167736e-22!GO:0006512;ubiquitin cycle;4.12476235376594e-22!GO:0022618;protein-RNA complex assembly;6.01340690410014e-22!GO:0051641;cellular localization;1.38274401801558e-21!GO:0016887;ATPase activity;3.50786625983892e-21!GO:0042623;ATPase activity, coupled;2.18667107392591e-20!GO:0008134;transcription factor binding;2.36728212739861e-20!GO:0006325;establishment and/or maintenance of chromatin architecture;6.12534536805479e-20!GO:0006511;ubiquitin-dependent protein catabolic process;6.36132795122881e-20!GO:0019941;modification-dependent protein catabolic process;6.60747695616029e-20!GO:0043632;modification-dependent macromolecule catabolic process;6.60747695616029e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;7.99795251626923e-20!GO:0043285;biopolymer catabolic process;1.2648650474289e-19!GO:0008135;translation factor activity, nucleic acid binding;1.74131158143006e-19!GO:0044257;cellular protein catabolic process;2.27301716741061e-19!GO:0006457;protein folding;2.43189353782727e-19!GO:0044248;cellular catabolic process;2.63498807922628e-19!GO:0009057;macromolecule catabolic process;2.92218838390398e-19!GO:0006323;DNA packaging;3.07713440635346e-19!GO:0005746;mitochondrial respiratory chain;3.43958135337992e-19!GO:0005761;mitochondrial ribosome;1.51097962434333e-18!GO:0000313;organellar ribosome;1.51097962434333e-18!GO:0000398;nuclear mRNA splicing, via spliceosome;1.60272270611982e-18!GO:0000375;RNA splicing, via transesterification reactions;1.60272270611982e-18!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.60272270611982e-18!GO:0000502;proteasome complex (sensu Eukaryota);8.07014585446202e-18!GO:0031965;nuclear membrane;1.38738101820606e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.3244371079275e-17!GO:0005635;nuclear envelope;2.98537517520956e-17!GO:0044453;nuclear membrane part;6.72473189824875e-17!GO:0050136;NADH dehydrogenase (quinone) activity;7.50800741593263e-17!GO:0003954;NADH dehydrogenase activity;7.50800741593263e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.50800741593263e-17!GO:0004386;helicase activity;7.95761605278328e-17!GO:0016604;nuclear body;9.63626626693443e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.22079299623287e-16!GO:0006605;protein targeting;1.45119745249322e-16!GO:0006403;RNA localization;2.30581042542048e-16!GO:0050657;nucleic acid transport;2.75308710923508e-16!GO:0051236;establishment of RNA localization;2.75308710923508e-16!GO:0050658;RNA transport;2.75308710923508e-16!GO:0006364;rRNA processing;4.7065861165857e-16!GO:0006399;tRNA metabolic process;5.19162563742562e-16!GO:0016568;chromatin modification;8.56122190237696e-16!GO:0005643;nuclear pore;9.64074608336752e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.01977662519535e-15!GO:0016072;rRNA metabolic process;1.21895607653317e-15!GO:0008026;ATP-dependent helicase activity;3.65457180474799e-15!GO:0042775;organelle ATP synthesis coupled electron transport;4.14034441301451e-15!GO:0042773;ATP synthesis coupled electron transport;4.14034441301451e-15!GO:0043412;biopolymer modification;5.63438427321193e-15!GO:0051186;cofactor metabolic process;8.31742252035432e-15!GO:0030964;NADH dehydrogenase complex (quinone);8.57660447574544e-15!GO:0045271;respiratory chain complex I;8.57660447574544e-15!GO:0005747;mitochondrial respiratory chain complex I;8.57660447574544e-15!GO:0051726;regulation of cell cycle;1.12172820664774e-14!GO:0003743;translation initiation factor activity;1.64536121903628e-14!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.69232832927641e-14!GO:0003712;transcription cofactor activity;1.92401376864926e-14!GO:0030163;protein catabolic process;2.08958321488319e-14!GO:0012505;endomembrane system;2.2477543291195e-14!GO:0000074;regulation of progression through cell cycle;2.5267864869233e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.84534765379732e-14!GO:0000785;chromatin;6.35716451312161e-14!GO:0051028;mRNA transport;6.35716451312161e-14!GO:0006913;nucleocytoplasmic transport;1.37559426971511e-13!GO:0065002;intracellular protein transport across a membrane;1.4333414130336e-13!GO:0006261;DNA-dependent DNA replication;1.49299265682929e-13!GO:0051082;unfolded protein binding;1.5112704710578e-13!GO:0012501;programmed cell death;2.10696892991139e-13!GO:0006413;translational initiation;2.18187277883969e-13!GO:0006915;apoptosis;2.24244875878911e-13!GO:0046930;pore complex;2.53031154931233e-13!GO:0051169;nuclear transport;3.70332543532107e-13!GO:0009259;ribonucleotide metabolic process;6.50756645373861e-13!GO:0016779;nucleotidyltransferase activity;9.42352687369298e-13!GO:0000775;chromosome, pericentric region;1.14719741994373e-12!GO:0016607;nuclear speck;1.34356323660073e-12!GO:0006333;chromatin assembly or disassembly;2.65066055741237e-12!GO:0006163;purine nucleotide metabolic process;3.15651563977585e-12!GO:0006732;coenzyme metabolic process;4.28022171799021e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.58978431331332e-12!GO:0006464;protein modification process;4.6878905805435e-12!GO:0043687;post-translational protein modification;5.31600661180871e-12!GO:0006446;regulation of translational initiation;6.51056295208763e-12!GO:0009055;electron carrier activity;7.11087996549728e-12!GO:0003697;single-stranded DNA binding;7.58634820625674e-12!GO:0009260;ribonucleotide biosynthetic process;7.92446149116591e-12!GO:0006164;purine nucleotide biosynthetic process;1.00681151469091e-11!GO:0048770;pigment granule;1.41493996723705e-11!GO:0042470;melanosome;1.41493996723705e-11!GO:0008219;cell death;1.82812484368553e-11!GO:0016265;death;1.82812484368553e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.83862111711184e-11!GO:0043566;structure-specific DNA binding;1.83862111711184e-11!GO:0006366;transcription from RNA polymerase II promoter;2.15109003528598e-11!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.27132935944169e-11!GO:0004812;aminoacyl-tRNA ligase activity;2.27132935944169e-11!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.27132935944169e-11!GO:0030532;small nuclear ribonucleoprotein complex;2.60983232501633e-11!GO:0009150;purine ribonucleotide metabolic process;3.03778106866702e-11!GO:0043038;amino acid activation;4.38755531042386e-11!GO:0006418;tRNA aminoacylation for protein translation;4.38755531042386e-11!GO:0043039;tRNA aminoacylation;4.38755531042386e-11!GO:0009152;purine ribonucleotide biosynthetic process;9.85654358796256e-11!GO:0009056;catabolic process;1.56166427372494e-10!GO:0065004;protein-DNA complex assembly;2.13022625196537e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.70876674498458e-10!GO:0008639;small protein conjugating enzyme activity;2.86742003154815e-10!GO:0005819;spindle;3.24318868708451e-10!GO:0017038;protein import;4.22555219559995e-10!GO:0000075;cell cycle checkpoint;6.93139277203999e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.84441265137081e-10!GO:0008094;DNA-dependent ATPase activity;9.15520709564467e-10!GO:0004842;ubiquitin-protein ligase activity;9.97023646643263e-10!GO:0006461;protein complex assembly;1.00023949655487e-09!GO:0044432;endoplasmic reticulum part;1.07506849608358e-09!GO:0019222;regulation of metabolic process;1.51341079762379e-09!GO:0005657;replication fork;1.64105949564716e-09!GO:0019787;small conjugating protein ligase activity;1.83612530680867e-09!GO:0006310;DNA recombination;1.95506726206139e-09!GO:0016740;transferase activity;2.28249943491087e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.60095317309282e-09!GO:0009141;nucleoside triphosphate metabolic process;3.62538933338243e-09!GO:0019829;cation-transporting ATPase activity;3.66803466105526e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.82207295500028e-09!GO:0015078;hydrogen ion transmembrane transporter activity;4.53349286221557e-09!GO:0015630;microtubule cytoskeleton;4.86326651121807e-09!GO:0009142;nucleoside triphosphate biosynthetic process;5.62757715564065e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.62757715564065e-09!GO:0009060;aerobic respiration;5.64107720575737e-09!GO:0051325;interphase;5.93245565615419e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.00655734874995e-09!GO:0005667;transcription factor complex;6.27508312249783e-09!GO:0050794;regulation of cellular process;6.27508312249783e-09!GO:0048193;Golgi vesicle transport;7.10396629179137e-09!GO:0005813;centrosome;7.7946968387873e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.23249756352651e-09!GO:0009144;purine nucleoside triphosphate metabolic process;8.23249756352651e-09!GO:0005783;endoplasmic reticulum;8.74365798728463e-09!GO:0016787;hydrolase activity;8.87206542536281e-09!GO:0005839;proteasome core complex (sensu Eukaryota);9.91436515321741e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.0206969727473e-08!GO:0003899;DNA-directed RNA polymerase activity;1.07148697974313e-08!GO:0051329;interphase of mitotic cell cycle;1.08101769488636e-08!GO:0016741;transferase activity, transferring one-carbon groups;1.17259144626684e-08!GO:0005815;microtubule organizing center;1.19419774633172e-08!GO:0045333;cellular respiration;1.27964200182477e-08!GO:0051188;cofactor biosynthetic process;1.29748121899736e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.33183304996653e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.33183304996653e-08!GO:0042981;regulation of apoptosis;1.38601948623589e-08!GO:0008168;methyltransferase activity;1.47043771104357e-08!GO:0003713;transcription coactivator activity;1.68315292478538e-08!GO:0043067;regulation of programmed cell death;2.02184752682476e-08!GO:0005789;endoplasmic reticulum membrane;2.02633314590861e-08!GO:0000245;spliceosome assembly;2.07857439386855e-08!GO:0008565;protein transporter activity;2.08730298944759e-08!GO:0032446;protein modification by small protein conjugation;2.38459016741659e-08!GO:0015986;ATP synthesis coupled proton transport;2.44757653160626e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.44757653160626e-08!GO:0016881;acid-amino acid ligase activity;3.03060769037526e-08!GO:0007005;mitochondrion organization and biogenesis;3.88930817825035e-08!GO:0031323;regulation of cellular metabolic process;5.17727449647072e-08!GO:0016567;protein ubiquitination;5.26171330317955e-08!GO:0004298;threonine endopeptidase activity;5.52685490583571e-08!GO:0006793;phosphorus metabolic process;6.42992933689596e-08!GO:0006796;phosphate metabolic process;6.42992933689596e-08!GO:0009117;nucleotide metabolic process;6.58171245930835e-08!GO:0016563;transcription activator activity;7.76846445695933e-08!GO:0007051;spindle organization and biogenesis;8.00644491666784e-08!GO:0006099;tricarboxylic acid cycle;8.47866799554112e-08!GO:0046356;acetyl-CoA catabolic process;8.47866799554112e-08!GO:0046034;ATP metabolic process;9.07669454276858e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.03616649647878e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.05290691581699e-07!GO:0006084;acetyl-CoA metabolic process;1.12195375342166e-07!GO:0006754;ATP biosynthetic process;1.21665807774923e-07!GO:0006753;nucleoside phosphate metabolic process;1.21665807774923e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.48219080736351e-07!GO:0006350;transcription;1.60403234006378e-07!GO:0016310;phosphorylation;1.70912000817951e-07!GO:0003682;chromatin binding;1.79743438732891e-07!GO:0045259;proton-transporting ATP synthase complex;1.88591699269937e-07!GO:0000151;ubiquitin ligase complex;1.93396224013299e-07!GO:0003724;RNA helicase activity;2.28010343375702e-07!GO:0006302;double-strand break repair;2.31910135579848e-07!GO:0051168;nuclear export;2.78249672362604e-07!GO:0006752;group transfer coenzyme metabolic process;4.99929010265953e-07!GO:0009108;coenzyme biosynthetic process;5.31460864749836e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.06176523607051e-07!GO:0003678;DNA helicase activity;7.2993126569447e-07!GO:0044452;nucleolar part;7.44329480908113e-07!GO:0007059;chromosome segregation;9.1111720930449e-07!GO:0005762;mitochondrial large ribosomal subunit;9.45682453158727e-07!GO:0000315;organellar large ribosomal subunit;9.45682453158727e-07!GO:0009109;coenzyme catabolic process;1.00408335394629e-06!GO:0004518;nuclease activity;1.19614102420871e-06!GO:0031497;chromatin assembly;1.47335394209059e-06!GO:0003690;double-stranded DNA binding;1.51536966888466e-06!GO:0019899;enzyme binding;1.6156033229181e-06!GO:0006401;RNA catabolic process;1.62016744763382e-06!GO:0008033;tRNA processing;1.81133454742551e-06!GO:0051170;nuclear import;1.94503224755476e-06!GO:0051246;regulation of protein metabolic process;2.00907363340192e-06!GO:0006334;nucleosome assembly;2.3426507692919e-06!GO:0043623;cellular protein complex assembly;2.39771078743479e-06!GO:0004527;exonuclease activity;2.91024002543588e-06!GO:0003684;damaged DNA binding;3.13491117794316e-06!GO:0000228;nuclear chromosome;3.47312013362375e-06!GO:0000314;organellar small ribosomal subunit;3.47312013362375e-06!GO:0005763;mitochondrial small ribosomal subunit;3.47312013362375e-06!GO:0031324;negative regulation of cellular metabolic process;3.52926694093477e-06!GO:0051187;cofactor catabolic process;4.27032505736024e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.32687409221542e-06!GO:0006606;protein import into nucleus;4.35128241351633e-06!GO:0016564;transcription repressor activity;4.84350215324048e-06!GO:0010468;regulation of gene expression;5.20392612154155e-06!GO:0051052;regulation of DNA metabolic process;5.22119910637886e-06!GO:0000776;kinetochore;6.11012708944178e-06!GO:0003677;DNA binding;7.4691801167395e-06!GO:0006402;mRNA catabolic process;8.00002217701665e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.2303990795716e-06!GO:0016363;nuclear matrix;9.62151429905787e-06!GO:0043681;protein import into mitochondrion;1.0763543462531e-05!GO:0065009;regulation of a molecular function;1.35260818962775e-05!GO:0007093;mitotic cell cycle checkpoint;1.35767340166201e-05!GO:0008186;RNA-dependent ATPase activity;1.46398478197017e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.51510616367355e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;1.81464867491306e-05!GO:0006613;cotranslational protein targeting to membrane;1.81464867491306e-05!GO:0045786;negative regulation of progression through cell cycle;2.35514264178271e-05!GO:0009165;nucleotide biosynthetic process;2.50505903158594e-05!GO:0007088;regulation of mitosis;2.78769934857562e-05!GO:0030880;RNA polymerase complex;2.80230816891826e-05!GO:0006383;transcription from RNA polymerase III promoter;3.05579312341494e-05!GO:0032508;DNA duplex unwinding;3.18866973652189e-05!GO:0032392;DNA geometric change;3.18866973652189e-05!GO:0043065;positive regulation of apoptosis;3.23200941114135e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.23792251986001e-05!GO:0015399;primary active transmembrane transporter activity;3.23792251986001e-05!GO:0006091;generation of precursor metabolites and energy;3.69447255932446e-05!GO:0006626;protein targeting to mitochondrion;3.71345528992955e-05!GO:0043021;ribonucleoprotein binding;3.74887531064107e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;3.77490261821937e-05!GO:0003729;mRNA binding;3.9548496499182e-05!GO:0006284;base-excision repair;3.98700838015565e-05!GO:0050789;regulation of biological process;4.03788520929531e-05!GO:0003714;transcription corepressor activity;4.27963151359692e-05!GO:0043068;positive regulation of programmed cell death;4.65525969878948e-05!GO:0004004;ATP-dependent RNA helicase activity;4.69562983347657e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.93328526006821e-05!GO:0004674;protein serine/threonine kinase activity;5.09575614407359e-05!GO:0006352;transcription initiation;6.27655098910743e-05!GO:0006405;RNA export from nucleus;6.41977292311162e-05!GO:0016853;isomerase activity;6.9950789241657e-05!GO:0055029;nuclear DNA-directed RNA polymerase complex;7.29369473110349e-05!GO:0000428;DNA-directed RNA polymerase complex;7.29369473110349e-05!GO:0005753;mitochondrial proton-transporting ATP synthase complex;7.29369473110349e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.32002642391345e-05!GO:0016481;negative regulation of transcription;7.41993896097174e-05!GO:0016192;vesicle-mediated transport;8.37654080278052e-05!GO:0016251;general RNA polymerase II transcription factor activity;8.42083643442276e-05!GO:0016491;oxidoreductase activity;8.51725281384185e-05!GO:0006414;translational elongation;8.95456129624475e-05!GO:0032774;RNA biosynthetic process;9.20835185510492e-05!GO:0045454;cell redox homeostasis;9.29431996090932e-05!GO:0006268;DNA unwinding during replication;0.000100808861432915!GO:0031072;heat shock protein binding;0.000102183450763129!GO:0006351;transcription, DNA-dependent;0.00011862258893864!GO:0030120;vesicle coat;0.000120315846091803!GO:0030662;coated vesicle membrane;0.000120315846091803!GO:0006839;mitochondrial transport;0.000122357479164638!GO:0042770;DNA damage response, signal transduction;0.000128768200586922!GO:0003711;transcription elongation regulator activity;0.000132837426243775!GO:0006818;hydrogen transport;0.000137691982086738!GO:0005684;U2-dependent spliceosome;0.000148144583282695!GO:0005793;ER-Golgi intermediate compartment;0.000155187451690776!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.000161381900256543!GO:0006612;protein targeting to membrane;0.000170683549951167!GO:0006917;induction of apoptosis;0.00017108092767111!GO:0015992;proton transport;0.000175432610704741!GO:0007006;mitochondrial membrane organization and biogenesis;0.000182007841550637!GO:0048475;coated membrane;0.000185350585142631!GO:0030117;membrane coat;0.000185350585142631!GO:0000049;tRNA binding;0.000195300243626062!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000221816999918116!GO:0009892;negative regulation of metabolic process;0.000222275227140415!GO:0005768;endosome;0.000230041902444128!GO:0006520;amino acid metabolic process;0.000235008693723855!GO:0012502;induction of programmed cell death;0.000239839297234534!GO:0015631;tubulin binding;0.000240021103857684!GO:0007052;mitotic spindle organization and biogenesis;0.000240071864206072!GO:0005794;Golgi apparatus;0.000246420478889276!GO:0051427;hormone receptor binding;0.000249097194798074!GO:0032200;telomere organization and biogenesis;0.000250089577555905!GO:0000723;telomere maintenance;0.000250089577555905!GO:0009451;RNA modification;0.000271379737882686!GO:0045449;regulation of transcription;0.000322941183373216!GO:0006289;nucleotide-excision repair;0.000355523397746025!GO:0043596;nuclear replication fork;0.000365568953546575!GO:0043492;ATPase activity, coupled to movement of substances;0.000373304495201746!GO:0000922;spindle pole;0.000392213773993786!GO:0004003;ATP-dependent DNA helicase activity;0.000403129371800866!GO:0031570;DNA integrity checkpoint;0.000408825305530505!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.000412133018468766!GO:0019752;carboxylic acid metabolic process;0.000423915573393755!GO:0008276;protein methyltransferase activity;0.000440386612454422!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000467757370874155!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000474548663759309!GO:0035257;nuclear hormone receptor binding;0.00047778723291575!GO:0006082;organic acid metabolic process;0.000497103590831539!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000501765623027734!GO:0005885;Arp2/3 protein complex;0.000524908796841043!GO:0006338;chromatin remodeling;0.000529582474341705!GO:0000793;condensed chromosome;0.000529582474341705!GO:0048523;negative regulation of cellular process;0.000561328264428562!GO:0032259;methylation;0.00056613917519168!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000575070637609911!GO:0000059;protein import into nucleus, docking;0.000580277536050257!GO:0005876;spindle microtubule;0.00058153531560662!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000594283820678981!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000594283820678981!GO:0050790;regulation of catalytic activity;0.000614012540471066!GO:0043069;negative regulation of programmed cell death;0.000634586165091348!GO:0000082;G1/S transition of mitotic cell cycle;0.000685579469456766!GO:0003887;DNA-directed DNA polymerase activity;0.000695520055065431!GO:0044454;nuclear chromosome part;0.000714966326360374!GO:0015980;energy derivation by oxidation of organic compounds;0.000739286708363178!GO:0006417;regulation of translation;0.000759194028225205!GO:0022890;inorganic cation transmembrane transporter activity;0.000762218859242713!GO:0016859;cis-trans isomerase activity;0.000776176282764384!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000780031973252027!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000780031973252027!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000780031973252027!GO:0000819;sister chromatid segregation;0.000787793415699525!GO:0043066;negative regulation of apoptosis;0.000796200670043212!GO:0006270;DNA replication initiation;0.000806460608964853!GO:0051252;regulation of RNA metabolic process;0.000811296375433054!GO:0000070;mitotic sister chromatid segregation;0.000825727173128168!GO:0000792;heterochromatin;0.000825727173128168!GO:0006007;glucose catabolic process;0.000846153936097597!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000849978646014855!GO:0006275;regulation of DNA replication;0.000939632467416801!GO:0000287;magnesium ion binding;0.000947112562340447!GO:0009124;nucleoside monophosphate biosynthetic process;0.000996998880263944!GO:0009123;nucleoside monophosphate metabolic process;0.000996998880263944!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00101553475124205!GO:0008632;apoptotic program;0.00104225800426446!GO:0016126;sterol biosynthetic process;0.00107639691799062!GO:0008408;3'-5' exonuclease activity;0.00107711177192236!GO:0005770;late endosome;0.00110960040351345!GO:0031124;mRNA 3'-end processing;0.00115388219855891!GO:0000910;cytokinesis;0.00116940346280653!GO:0051087;chaperone binding;0.0011929225452194!GO:0000781;chromosome, telomeric region;0.00119807734685168!GO:0051920;peroxiredoxin activity;0.00122661254568652!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00125340307221692!GO:0005048;signal sequence binding;0.00126409478760498!GO:0051540;metal cluster binding;0.00128243857622475!GO:0051536;iron-sulfur cluster binding;0.00128243857622475!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00134580346956701!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00134830218639744!GO:0006916;anti-apoptosis;0.00136576803294318!GO:0043414;biopolymer methylation;0.00137097164824566!GO:0000725;recombinational repair;0.00137824232744446!GO:0000724;double-strand break repair via homologous recombination;0.00137824232744446!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00138648734910622!GO:0007017;microtubule-based process;0.00142070286922092!GO:0031123;RNA 3'-end processing;0.0014354905764149!GO:0006695;cholesterol biosynthetic process;0.0014719766712254!GO:0009112;nucleobase metabolic process;0.0014719766712254!GO:0016272;prefoldin complex;0.00149702179486685!GO:0008017;microtubule binding;0.00158727920481765!GO:0006611;protein export from nucleus;0.00172352310451793!GO:0006950;response to stress;0.00173269726664718!GO:0006144;purine base metabolic process;0.00174555280350112!GO:0046483;heterocycle metabolic process;0.00175262507018283!GO:0008022;protein C-terminus binding;0.00176479911172628!GO:0048500;signal recognition particle;0.00178085127009864!GO:0000077;DNA damage checkpoint;0.00188027814759801!GO:0006595;polyamine metabolic process;0.00191217231896585!GO:0019783;small conjugating protein-specific protease activity;0.00191753335182522!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00192528968598539!GO:0044450;microtubule organizing center part;0.00199055329515852!GO:0000786;nucleosome;0.00202535094240986!GO:0006891;intra-Golgi vesicle-mediated transport;0.00206092065649944!GO:0008312;7S RNA binding;0.00210084056279334!GO:0004532;exoribonuclease activity;0.00210084056279334!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00210084056279334!GO:0008139;nuclear localization sequence binding;0.00210276614699971!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00210276614699971!GO:0015002;heme-copper terminal oxidase activity;0.00210276614699971!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00210276614699971!GO:0004129;cytochrome-c oxidase activity;0.00210276614699971!GO:0019867;outer membrane;0.00214644699552313!GO:0031326;regulation of cellular biosynthetic process;0.00215465635626026!GO:0051539;4 iron, 4 sulfur cluster binding;0.00225299515203823!GO:0009161;ribonucleoside monophosphate metabolic process;0.00228312683016528!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00228312683016528!GO:0003746;translation elongation factor activity;0.00233540787706596!GO:0004843;ubiquitin-specific protease activity;0.00238521329461732!GO:0006220;pyrimidine nucleotide metabolic process;0.00239160954876365!GO:0031968;organelle outer membrane;0.00242086796316212!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00242086796316212!GO:0005769;early endosome;0.00259256491979646!GO:0042393;histone binding;0.0026387633880836!GO:0006400;tRNA modification;0.00268777808664979!GO:0043601;nuclear replisome;0.00276874468343439!GO:0030894;replisome;0.00276874468343439!GO:0005758;mitochondrial intermembrane space;0.00279775456220421!GO:0051320;S phase;0.00320128342516094!GO:0016407;acetyltransferase activity;0.0034289516103563!GO:0009116;nucleoside metabolic process;0.00344294088259816!GO:0030384;phosphoinositide metabolic process;0.00346335801549738!GO:0016197;endosome transport;0.00359701700000975!GO:0008654;phospholipid biosynthetic process;0.00380121479390835!GO:0042054;histone methyltransferase activity;0.00384649404454697!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00393074026462728!GO:0047485;protein N-terminus binding;0.00405700922298243!GO:0043488;regulation of mRNA stability;0.00413228674827172!GO:0043487;regulation of RNA stability;0.00413228674827172!GO:0004221;ubiquitin thiolesterase activity;0.0043145565146309!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00436101959496257!GO:0006730;one-carbon compound metabolic process;0.00439016731149779!GO:0005663;DNA replication factor C complex;0.00439016731149779!GO:0000152;nuclear ubiquitin ligase complex;0.00439679681435544!GO:0000726;non-recombinational repair;0.00441398982923659!GO:0000178;exosome (RNase complex);0.0044551205900172!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00446060168845219!GO:0045047;protein targeting to ER;0.00446060168845219!GO:0005669;transcription factor TFIID complex;0.0044905675666148!GO:0008629;induction of apoptosis by intracellular signals;0.00451078675521539!GO:0048519;negative regulation of biological process;0.00489144466576689!GO:0000339;RNA cap binding;0.00504149159157573!GO:0051053;negative regulation of DNA metabolic process;0.00526042846299378!GO:0005741;mitochondrial outer membrane;0.00529884510584302!GO:0033116;ER-Golgi intermediate compartment membrane;0.00544655392226305!GO:0046474;glycerophospholipid biosynthetic process;0.00572525377163196!GO:0006378;mRNA polyadenylation;0.00582415376033839!GO:0048471;perinuclear region of cytoplasm;0.00582708372139995!GO:0046365;monosaccharide catabolic process;0.00591256808723075!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00600859172710871!GO:0009889;regulation of biosynthetic process;0.00606779328828739!GO:0006650;glycerophospholipid metabolic process;0.00608823922850307!GO:0006519;amino acid and derivative metabolic process;0.00616315208387062!GO:0031647;regulation of protein stability;0.00630370402149111!GO:0016279;protein-lysine N-methyltransferase activity;0.006404458871096!GO:0018024;histone-lysine N-methyltransferase activity;0.006404458871096!GO:0016278;lysine N-methyltransferase activity;0.006404458871096!GO:0006740;NADPH regeneration;0.00642073908765155!GO:0006098;pentose-phosphate shunt;0.00642073908765155!GO:0016584;nucleosome positioning;0.0065388834324608!GO:0008234;cysteine-type peptidase activity;0.00672128415549475!GO:0043284;biopolymer biosynthetic process;0.00675483128808509!GO:0006355;regulation of transcription, DNA-dependent;0.00679753493681461!GO:0007004;telomere maintenance via telomerase;0.00683110133648107!GO:0007021;tubulin folding;0.00692511411259302!GO:0004536;deoxyribonuclease activity;0.00700438993758662!GO:0046164;alcohol catabolic process;0.00731296655604232!GO:0031577;spindle checkpoint;0.00740747869814118!GO:0030521;androgen receptor signaling pathway;0.00740747869814118!GO:0003702;RNA polymerase II transcription factor activity;0.00746600024152747!GO:0003725;double-stranded RNA binding;0.0075392265229298!GO:0006278;RNA-dependent DNA replication;0.0076565054078221!GO:0005773;vacuole;0.00766779314919731!GO:0051656;establishment of organelle localization;0.00773901030894441!GO:0005874;microtubule;0.00776605204217815!GO:0005637;nuclear inner membrane;0.00778187823009543!GO:0045892;negative regulation of transcription, DNA-dependent;0.00779547157371269!GO:0031970;organelle envelope lumen;0.00796186537706463!GO:0006406;mRNA export from nucleus;0.00800619123049372!GO:0009303;rRNA transcription;0.00831483569486877!GO:0005798;Golgi-associated vesicle;0.00839106918915307!GO:0043022;ribosome binding;0.00841092926178342!GO:0006376;mRNA splice site selection;0.00841092926178342!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00841092926178342!GO:0044440;endosomal part;0.00862176236329157!GO:0010008;endosome membrane;0.00862176236329157!GO:0005832;chaperonin-containing T-complex;0.00866479040714753!GO:0046489;phosphoinositide biosynthetic process;0.00905190807997205!GO:0016790;thiolester hydrolase activity;0.0092287784625855!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0092287784625855!GO:0045039;protein import into mitochondrial inner membrane;0.0092287784625855!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00927347318500052!GO:0042802;identical protein binding;0.00937023045652642!GO:0019320;hexose catabolic process;0.0097435974998066!GO:0019843;rRNA binding;0.0099410638754931!GO:0035258;steroid hormone receptor binding;0.0101429794413376!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0102162610387818!GO:0007243;protein kinase cascade;0.0103299928468987!GO:0007050;cell cycle arrest;0.0105459430139581!GO:0035267;NuA4 histone acetyltransferase complex;0.010671980925395!GO:0048487;beta-tubulin binding;0.0107698559581806!GO:0016569;covalent chromatin modification;0.0109160081118957!GO:0030663;COPI coated vesicle membrane;0.011269094825136!GO:0030126;COPI vesicle coat;0.011269094825136!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.011269094825136!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.011269094825136!GO:0009126;purine nucleoside monophosphate metabolic process;0.011269094825136!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.011269094825136!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0113062085423366!GO:0008652;amino acid biosynthetic process;0.0114640450984417!GO:0043631;RNA polyadenylation;0.0114954960740836!GO:0030518;steroid hormone receptor signaling pathway;0.0116004936751597!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0119547193420334!GO:0000209;protein polyubiquitination;0.0119944016108687!GO:0051338;regulation of transferase activity;0.0120849265710277!GO:0000323;lytic vacuole;0.012390949763568!GO:0005764;lysosome;0.012390949763568!GO:0006096;glycolysis;0.0124339528865353!GO:0000175;3'-5'-exoribonuclease activity;0.0129429402717949!GO:0006266;DNA ligation;0.0131892244286345!GO:0043549;regulation of kinase activity;0.0133008496875447!GO:0004523;ribonuclease H activity;0.0135326145712727!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0135423223707129!GO:0005732;small nucleolar ribonucleoprotein complex;0.0135839332785468!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0136818597746665!GO:0010257;NADH dehydrogenase complex assembly;0.0136818597746665!GO:0033108;mitochondrial respiratory chain complex assembly;0.0136818597746665!GO:0043189;H4/H2A histone acetyltransferase complex;0.0136818597746665!GO:0003924;GTPase activity;0.0143137298553838!GO:0048522;positive regulation of cellular process;0.014327071267637!GO:0019210;kinase inhibitor activity;0.0144230013338459!GO:0031625;ubiquitin protein ligase binding;0.0145704375125413!GO:0005525;GTP binding;0.0146139182624124!GO:0004520;endodeoxyribonuclease activity;0.0146139182624124!GO:0030433;ER-associated protein catabolic process;0.0146139182624124!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0146139182624124!GO:0045941;positive regulation of transcription;0.0149283808082907!GO:0051297;centrosome organization and biogenesis;0.0150753934094644!GO:0031023;microtubule organizing center organization and biogenesis;0.0150753934094644!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0156716975521627!GO:0000118;histone deacetylase complex;0.0156980986216208!GO:0006301;postreplication repair;0.0158528614044898!GO:0046426;negative regulation of JAK-STAT cascade;0.0161619424896505!GO:0004860;protein kinase inhibitor activity;0.0162806580939008!GO:0000123;histone acetyltransferase complex;0.0162806580939008!GO:0033170;DNA-protein loading ATPase activity;0.0163915833082339!GO:0003689;DNA clamp loader activity;0.0163915833082339!GO:0009081;branched chain family amino acid metabolic process;0.0166507832596478!GO:0001824;blastocyst development;0.0167648092278797!GO:0006118;electron transport;0.0171107364934073!GO:0050662;coenzyme binding;0.0171107364934073!GO:0046112;nucleobase biosynthetic process;0.0178296555767846!GO:0004540;ribonuclease activity;0.0179089348448011!GO:0015036;disulfide oxidoreductase activity;0.0180290808485289!GO:0008287;protein serine/threonine phosphatase complex;0.0181982031971969!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0181982031971969!GO:0046966;thyroid hormone receptor binding;0.0185552715217152!GO:0008180;signalosome;0.0185638484501996!GO:0005092;GDP-dissociation inhibitor activity;0.018585981808125!GO:0004722;protein serine/threonine phosphatase activity;0.0187260574114295!GO:0051789;response to protein stimulus;0.0197645886824233!GO:0006986;response to unfolded protein;0.0197645886824233!GO:0007346;regulation of progression through mitotic cell cycle;0.0197900554809854!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0201272177328494!GO:0005680;anaphase-promoting complex;0.020188897378372!GO:0051287;NAD binding;0.0204189918303967!GO:0032404;mismatch repair complex binding;0.0204909120897189!GO:0000930;gamma-tubulin complex;0.0208705637533934!GO:0008213;protein amino acid alkylation;0.0209630664632684!GO:0006479;protein amino acid methylation;0.0209630664632684!GO:0019104;DNA N-glycosylase activity;0.0209730859622479!GO:0045120;pronucleus;0.0210863474103612!GO:0031252;leading edge;0.021095090648827!GO:0051640;organelle localization;0.021095090648827!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0214630215294685!GO:0008159;positive transcription elongation factor activity;0.0215323343260026!GO:0000096;sulfur amino acid metabolic process;0.0215323343260026!GO:0030867;rough endoplasmic reticulum membrane;0.0216406641332325!GO:0044431;Golgi apparatus part;0.0219353792610082!GO:0008170;N-methyltransferase activity;0.0219687393462693!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0219687393462693!GO:0005689;U12-dependent spliceosome;0.0219691213419977!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0224469255007273!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0224469255007273!GO:0016585;chromatin remodeling complex;0.0227980511675817!GO:0005652;nuclear lamina;0.0229125456599408!GO:0040029;regulation of gene expression, epigenetic;0.0231301020687996!GO:0008299;isoprenoid biosynthetic process;0.0231532488550393!GO:0045859;regulation of protein kinase activity;0.0233994340741977!GO:0008156;negative regulation of DNA replication;0.0235316673997627!GO:0032039;integrator complex;0.0235678676807361!GO:0008097;5S rRNA binding;0.0236948685844865!GO:0030137;COPI-coated vesicle;0.0239383297058837!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0239812886986815!GO:0030508;thiol-disulfide exchange intermediate activity;0.0240108367603622!GO:0001522;pseudouridine synthesis;0.0242381319287581!GO:0005869;dynactin complex;0.0244149765883312!GO:0005521;lamin binding;0.0250494542012785!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0251952921447565!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0256242371693949!GO:0042113;B cell activation;0.0259206129329583!GO:0007010;cytoskeleton organization and biogenesis;0.0259696645036583!GO:0000119;mediator complex;0.0260633257308741!GO:0030658;transport vesicle membrane;0.0260986157172804!GO:0065007;biological regulation;0.0261552125350153!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0262637114850161!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0262637114850161!GO:0006596;polyamine biosynthetic process;0.026342786513369!GO:0009262;deoxyribonucleotide metabolic process;0.0269750950334772!GO:0033261;regulation of progression through S phase;0.0271529361434971!GO:0051318;G1 phase;0.0276183403290348!GO:0044438;microbody part;0.0276813349122493!GO:0044439;peroxisomal part;0.0276813349122493!GO:0009893;positive regulation of metabolic process;0.0279333392257417!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0280615986619894!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0280615986619894!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0280615986619894!GO:0008538;proteasome activator activity;0.0280722387882544!GO:0045815;positive regulation of gene expression, epigenetic;0.0291490736987695!GO:0005487;nucleocytoplasmic transporter activity;0.0296821346774809!GO:0004402;histone acetyltransferase activity;0.0302058222793336!GO:0004468;lysine N-acetyltransferase activity;0.0302058222793336!GO:0016301;kinase activity;0.0302058222793336!GO:0006607;NLS-bearing substrate import into nucleus;0.0304906875958583!GO:0000790;nuclear chromatin;0.0309596609685134!GO:0006497;protein amino acid lipidation;0.0310032108189107!GO:0006303;double-strand break repair via nonhomologous end joining;0.0314168803717696!GO:0051348;negative regulation of transferase activity;0.0324991587002895!GO:0006298;mismatch repair;0.0325260207915928!GO:0045005;maintenance of fidelity during DNA-dependent DNA replication;0.0325260207915928!GO:0016570;histone modification;0.032536708542481!GO:0031371;ubiquitin conjugating enzyme complex;0.0326400263061441!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0330772836886552!GO:0022415;viral reproductive process;0.0332300484352179!GO:0008536;Ran GTPase binding;0.0335539864379179!GO:0007098;centrosome cycle;0.033932556635497!GO:0000084;S phase of mitotic cell cycle;0.0340530874300427!GO:0046982;protein heterodimerization activity;0.0343838981678762!GO:0008637;apoptotic mitochondrial changes;0.0345624023719898!GO:0033673;negative regulation of kinase activity;0.0355591975450498!GO:0006469;negative regulation of protein kinase activity;0.0355591975450498!GO:0016408;C-acyltransferase activity;0.0357982161190259!GO:0006379;mRNA cleavage;0.0357982161190259!GO:0004659;prenyltransferase activity;0.0358281230084685!GO:0043281;regulation of caspase activity;0.0359228200064048!GO:0000080;G1 phase of mitotic cell cycle;0.0359825209547465!GO:0046822;regulation of nucleocytoplasmic transport;0.0359825209547465!GO:0008143;poly(A) binding;0.0366369529792923!GO:0045730;respiratory burst;0.0371958892686919!GO:0007265;Ras protein signal transduction;0.0372824792784828!GO:0000097;sulfur amino acid biosynthetic process;0.0374539208040641!GO:0006221;pyrimidine nucleotide biosynthetic process;0.0376167209533421!GO:0016417;S-acyltransferase activity;0.0376299162617969!GO:0004448;isocitrate dehydrogenase activity;0.0378455678911464!GO:0031903;microbody membrane;0.0378455678911464!GO:0005778;peroxisomal membrane;0.0378455678911464!GO:0005784;translocon complex;0.0380006552289998!GO:0008320;protein transmembrane transporter activity;0.038331280769303!GO:0043087;regulation of GTPase activity;0.0385043594866149!GO:0045947;negative regulation of translational initiation;0.0397494927857205!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0403117327990063!GO:0005774;vacuolar membrane;0.0405317309152583!GO:0046128;purine ribonucleoside metabolic process;0.0406418516624082!GO:0042278;purine nucleoside metabolic process;0.0406418516624082!GO:0045792;negative regulation of cell size;0.0407231678704321!GO:0051336;regulation of hydrolase activity;0.0410190984097481!GO:0006779;porphyrin biosynthetic process;0.0411656618194847!GO:0033014;tetrapyrrole biosynthetic process;0.0411656618194847!GO:0004519;endonuclease activity;0.0414238766735288!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0419509111062589!GO:0042162;telomeric DNA binding;0.0419509111062589!GO:0001832;blastocyst growth;0.0420804241866075!GO:0050178;phenylpyruvate tautomerase activity;0.0423338824146573!GO:0017134;fibroblast growth factor binding;0.0429282867533587!GO:0004239;methionyl aminopeptidase activity;0.0441055841261695!GO:0019901;protein kinase binding;0.0441081046044954!GO:0008173;RNA methyltransferase activity;0.0441635811731468!GO:0030118;clathrin coat;0.0445618331806188!GO:0043130;ubiquitin binding;0.0450963135209785!GO:0032182;small conjugating protein binding;0.0450963135209785!GO:0030983;mismatched DNA binding;0.0450963135209785!GO:0009067;aspartate family amino acid biosynthetic process;0.0451472764260977!GO:0006919;caspase activation;0.0452602204963035!GO:0042809;vitamin D receptor binding;0.0454236850505631!GO:0030911;TPR domain binding;0.0456531972396639!GO:0022884;macromolecule transmembrane transporter activity;0.0456531972396639!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0456531972396639!GO:0042769;DNA damage response, detection of DNA damage;0.0459172282323146!GO:0030515;snoRNA binding;0.0460563809780833!GO:0016788;hydrolase activity, acting on ester bonds;0.0466059821845295!GO:0006354;RNA elongation;0.0466360067176223!GO:0030027;lamellipodium;0.047186239624571!GO:0030660;Golgi-associated vesicle membrane;0.0474487829987066!GO:0006767;water-soluble vitamin metabolic process;0.0475123431005829!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0481691176325737!GO:0031503;protein complex localization;0.0483222279970692!GO:0008610;lipid biosynthetic process;0.0486250431205411!GO:0006415;translational termination;0.0488620554194666!GO:0005658;alpha DNA polymerase:primase complex;0.0496720135461043
|sample_id=10631
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10631-108I1;search_select_hide=table117:FF:10631-108I1
}}
}}

Latest revision as of 14:31, 3 June 2020

Name:diffuse large B-cell lymphoma cell line:CTB-1
Species:Human (Homo sapiens)
Library ID:CNhs11741
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age70
cell typeb cell
cell lineCTB-1
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005068
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11741 CAGE DRX007867 DRR008739
Accession ID Hg19

Library idBAMCTSS
CNhs11741 DRZ000164 DRZ001549
Accession ID Hg38

Library idBAMCTSS
CNhs11741 DRZ011514 DRZ012899
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.521
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.652
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0728
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0.956
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0728
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0315
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0104
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.0728
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.532
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.357
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0128
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.113
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.1
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.135
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus1.097
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.077
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0966
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.104
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.0728
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0728
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.658
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0351
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.0364
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.238
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.298
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11741

Jaspar motifP-value
MA0002.20.681
MA0003.10.437
MA0004.10.161
MA0006.10.171
MA0007.10.514
MA0009.10.875
MA0014.10.662
MA0017.10.246
MA0018.20.119
MA0019.10.0343
MA0024.19.91734e-10
MA0025.10.17
MA0027.10.036
MA0028.10.00341
MA0029.10.408
MA0030.10.226
MA0031.10.772
MA0035.20.754
MA0038.10.777
MA0039.20.19
MA0040.10.146
MA0041.10.0576
MA0042.10.318
MA0043.10.424
MA0046.10.167
MA0047.20.934
MA0048.10.27
MA0050.10.905
MA0051.10.94
MA0052.10.0372
MA0055.10.152
MA0057.10.723
MA0058.10.204
MA0059.10.00732
MA0060.10.00254
MA0061.10.26
MA0062.26.60593e-4
MA0065.20.0789
MA0066.10.662
MA0067.10.402
MA0068.10.112
MA0069.10.246
MA0070.10.795
MA0071.10.778
MA0072.10.58
MA0073.10.95
MA0074.10.576
MA0076.10.0019
MA0077.10.842
MA0078.10.724
MA0079.20.104
MA0080.20.788
MA0081.10.505
MA0083.11.77164e-6
MA0084.10.766
MA0087.10.2
MA0088.10.0103
MA0090.11.45204e-4
MA0091.10.782
MA0092.10.51
MA0093.10.197
MA0099.21.34197e-13
MA0100.10.0173
MA0101.10.721
MA0102.20.0988
MA0103.10.0309
MA0104.27.98674e-4
MA0105.10.00421
MA0106.10.371
MA0107.10.435
MA0108.23.66216e-10
MA0111.10.187
MA0112.20.564
MA0113.10.208
MA0114.10.0883
MA0115.10.00363
MA0116.12.26361e-4
MA0117.10.994
MA0119.10.768
MA0122.10.306
MA0124.10.235
MA0125.10.746
MA0131.10.0386
MA0135.10.0497
MA0136.10.186
MA0137.22.60706e-5
MA0138.20.909
MA0139.10.861
MA0140.10.549
MA0141.10.208
MA0142.10.0224
MA0143.10.933
MA0144.17.39177e-4
MA0145.10.0643
MA0146.10.807
MA0147.12.36815e-4
MA0148.10.671
MA0149.10.174
MA0150.10.0128
MA0152.10.607
MA0153.10.00439
MA0154.10.215
MA0155.10.543
MA0156.10.238
MA0157.10.868
MA0159.10.518
MA0160.10.76
MA0162.10.821
MA0163.11.25874e-7
MA0164.10.33
MA0258.10.564
MA0259.10.0299



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11741

Novel motifP-value
10.0527
100.00685
1000.103
1010.211
1020.71
1030.542
1040.772
1050.747
1060.704
1070.568
1080.741
1090.404
110.0968
1100.151
1110.0356
1120.721
1130.782
1140.491
1150.35
1160.598
1170.0224
1180.164
1190.19
120.458
1200.354
1210.976
1220.839
1231.01965e-4
1240.283
1250.139
1260.752
1270.999
1280.355
1290.822
130.213
1300.446
1310.632
1320.694
1330.577
1340.764
1350.533
1360.0823
1370.856
1380.506
1390.281
140.847
1400.289
1410.0588
1420.395
1430.761
1440.589
1450.38
1460.987
1470.433
1480.115
1490.706
150.288
1500.856
1510.944
1520.0119
1530.869
1540.747
1550.017
1560.7
1570.246
1580.853
1590.316
160.647
1600.322
1610.0309
1620.626
1630.497
1640.0565
1650.882
1660.979
1670.0389
1680.968
1690.596
170.871
180.669
190.881
20.25
200.364
210.0453
220.433
230.073
240.818
250.0993
260.0326
270.99
280.939
290.0152
30.184
300.0749
310.839
320.651
330.599
340.338
350.179
360.052
370.657
380.651
390.268
40.529
400.298
410.817
420.205
430.615
440.0272
450.205
460.105
470.0429
480.123
490.132
50.66
500.835
510.671
520.183
530.65
540.837
550.442
560.95
570.0974
580.256
590.727
60.767
600.585
610.217
620.246
630.68
640.203
650.626
660.205
670.965
680.391
690.823
70.316
700.823
710.0215
720.726
730.356
740.854
750.00878
760.0382
770.293
780.221
790.563
80.133
800.283
810.11
820.96
830.966
840.911
850.14
860.583
870.431
880.861
890.691
90.295
908.97078e-4
910.569
920.25
930.919
940.427
950.456
960.876
970.0538
980.33
990.323



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11741


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)
0000785 (mature B cell)
0000819 (B-1 B cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
0060058 (lymphoma)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
0060073 (lymphatic system cancer)
8675 (lymphosarcoma)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100104 (lymphoma cell line sample)
0101518 (B-lymphoma cell line sample)
0102521 (diffuse large B-cell lymphoma cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000954 (small pre-B-II cell)

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