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{{f5samples
{{f5samples
|F5samples=
|DRA_sample_Accession=CAGE@SAMD00004974
|ancestors_in_anatomy_facet=UBERON:0000010,UBERON:0000013,UBERON:0000061,UBERON:0000073,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0001016,UBERON:0001062,UBERON:0002050,UBERON:0002410,UBERON:0002532,UBERON:0004121,UBERON:0005423
|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00004974
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000133,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000333,CL:0000548,CL:0002321
|HumanCAGEScanFiles=NCig10062;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep1.NCig10062.10508-107D4.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep1.NCig10062.10508-107D4.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep1.NCig10062.10508-107D4.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep1.NCig10062.10508-107D4.hg19.GCTATA.pairs.bed.gz!NCig10126;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep2.NCig10126.10508-107D4.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep2.NCig10126.10508-107D4.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep2.NCig10126.10508-107D4.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep2.NCig10126.10508-107D4.hg19.GCTATA.pairs.bed.gz
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:169,DOID:171,DOID:2994,DOID:3095,DOID:4
|accession_numbers=CAGE;DRX007960;DRR008832;DRZ000257;DRZ001642;DRZ011607;DRZ012992
|accession_numbers_RNASeq=RNA-Seq;DRX057128;DRR062887;DRZ007963
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000013,UBERON:0004121,UBERON:0011216,UBERON:0002410,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0000010,UBERON:0001016
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000333,CL:0000003,CL:0000548,CL:0002321,CL:0000219,CL:0000255
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:171,DOID:3095,DOID:2994,DOID:169
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100932,FF:0102989
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr2:16080659..16080685,+!p1@MYCN!2.88!761.99!MYCN;;chr2:182545234..182545252,-!p1@NEUROD1!2.83!670.04!NEUROD1;;chr4:174451370..174451387,-!p1@HAND2!2.41!256.56!HAND2;;chr11:71955210..71955227,-!p1@PHOX2A!2.41!253.74!PHOX2A;;chr1:160336851..160336868,+!p1@NHLH1!2.38!238.78!NHLH1;;chr4:81118647..81118666,+!p1@PRDM8!2.34!285.33!PRDM8;;chr4:41750731..41750748,-!p1@PHOX2B!2.29!195.42!PHOX2B;;chr7:19157248..19157268,-!p1@TWIST1!2.16!377.03!TWIST1;;chr2:16081912..16081931,+!p2@MYCN!2.10!126.23!MYCN;;chr2:74741569..74741620,+!p1@TLX2!2.09!121.24!TLX2;;chr13:72441315..72441454,-!p1@DACH1!2.02!199.77!DACH1;;chr4:174450089..174450153,-!p2@HAND2!2.01!100.78!HAND2;;chr12:103351444..103351461,+!p1@ASCL1!1.97!93.23!ASCL1;;chrX:136648279..136648295,+!p1@ZIC3!1.92!82.49!ZIC3;;chr20:20348740..20348757,+!p1@INSM1!1.92!81.98!INSM1;;chr5:153857778..153857794,-!p1@HAND1!1.91!80.57!HAND1;;chr1:116383738..116383752,-!p1@NHLH2!1.91!79.55!NHLH2;;chr2:16080823..16080836,+!p5@MYCN!1.89!75.84!MYCN;;chr10:8096631..8096660,+!p1@GATA3!1.87!87.10!GATA3;;chr2:16082155..16082169,+!p3@MYCN!1.85!70.09!MYCN;;chr4:174451350..174451363,-!p3@HAND2!1.83!66.38!HAND2;;chr5:50679228..50679288,+!p1@ISL1!1.82!64.84!ISL1;;chr2:16082395..16082415,+!p6@MYCN!1.79!60.88!MYCN;;chr4:41750057..41750078,-!p3@PHOX2B!1.78!59.47!PHOX2B;;chr15:57511609..57511651,+!p2@TCF12!1.76!92.60!TCF12;;chr17:48072574..48072597,-!p1@DLX3!1.76!56.79!DLX3;;chr17:37764128..37764258,-!p1@NEUROD2!1.76!56.66!NEUROD2;;chr13:37494365..37494381,-!p1@SMAD9!1.71!86.20!SMAD9;;chr10:8096772..8096787,+!p2@GATA3!1.69!56.53!GATA3;;chr2:5832508..5832524,+!p1@SOX11!1.67!46.17!SOX11;;chr7:63505799..63505904,+!p1@ZNF727!1.67!45.53!ZNF727;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.67!45.53!PEG3;;chr13:72441074..72441172,-!p2@DACH1!1.67!45.40!DACH1;;chr2:16080635..16080650,+!p4@MYCN!1.63!41.31!MYCN;;chr16:67197654..67197716,+!p3@HSF4!1.61!39.65!HSF4;;chr1:151032922..151032951,+!p2@MLLT11!1.60!62.54!MLLT11;;chr6:15401104..15401166,+!p5@JARID2!1.59!37.73!JARID2;;chr10:8095593..8095625,+!p3@GATA3!1.58!42.97!GATA3;;chr1:216896752..216896778,-!p1@ESRRG!1.56!34.92!ESRRG;;chr2:74741642..74741658,+!p2@TLX2!1.55!34.53!TLX2;;chr11:63684602..63684664,-!p1@RCOR2!1.52!62.41!RCOR2;;chr2:16082094..16082106,+!p7@MYCN!1.47!28.39!MYCN;;chr4:41750839..41750850,-!p2@PHOX2B!1.46!28.14!PHOX2B;;chr2:16082418..16082429,+!p8@MYCN!1.46!27.75!MYCN;;chr6:10412600..10412637,-!p1@TFAP2A!1.42!41.57!TFAP2A;;chr19:9609272..9609297,-!p1@ZNF560!1.42!25.58!ZNF560;;chrX:136648643..136648711,+!p2@ZIC3!1.42!25.20!ZIC3;;chr1:244214577..244214593,+!p1@ZNF238!1.41!24.56!ZNF238;;chr18:55102598..55102623,+!p1@ONECUT2!1.39!23.28!ONECUT2;;chr5:158526917..158526932,-!p1@EBF1!1.37!54.74!EBF1;;chrX:136648297..136648319,+!p3@ZIC3!1.35!21.61!ZIC3;;chr4:41750922..41750939,-!p4@PHOX2B!1.35!21.36!PHOX2B;;chr3:18486354..18486377,-!p2@SATB1!1.34!25.71!SATB1;;chr20:62795799..62795819,+!p1@MYT1!1.34!20.97!MYT1;;chr4:299227..299272,-!p1@ZNF732!1.33!20.46!ZNF732;;chr4:113437332..113437337,-!p1@NEUROG2!1.32!19.95!NEUROG2;;chr2:2334997..2335053,-!p1@MYT1L!1.32!19.82!MYT1L;;chr18:52989031..52989079,-!p2@TCF4!1.31!44.76!TCF4;;chr20:45142154..45142227,-!p1@ZNF334!1.31!38.37!ZNF334;;chr19:50432453..50432468,+!p1@ATF5!1.30!1031.34!ATF5;;chr2:239148671..239148686,-!p1@HES6!1.30!68.30!HES6;;chr2:166326200..166326216,+!p1@CSRNP3!1.28!26.60!CSRNP3;;chr12:55413751..55413765,+!p1@NEUROD4!1.28!18.03!NEUROD4;;chr19:38042240..38042309,+!p2@ZNF540!1.27!26.86!ZNF540;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!1.26!159.23!ZNF595;;chr4:81105027..81105039,+!p3@PRDM8!1.26!19.70!PRDM8;;chr6:10412392..10412409,-!p4@TFAP2A!1.26!19.44!TFAP2A;;chr8:40755333..40755352,-!p1@ZMAT4!1.25!16.75!ZMAT4;;chr1:116383716..116383723,-!p5@NHLH2!1.25!16.63!NHLH2;;chr5:150284532..150284549,-!p1@ZNF300!1.24!33.51!ZNF300;;chr2:5832493..5832507,+!p2@SOX11!1.23!16.11!SOX11;;chr1:151032860..151032918,+!p1@MLLT11!1.22!183.40!MLLT11;;chr2:60780607..60780624,-!p2@BCL11A!1.22!47.58!BCL11A;;chr2:25475120..25475176,-!p2@DNMT3A!1.22!20.85!DNMT3A;;chr19:58545454..58545498,+!p1@ZSCAN1!1.21!15.22!ZSCAN1;;chr4:206390..206444,+!p1@ZNF876P!1.20!26.09!ZNF876P;;chr19:19976683..19976709,+!p1@ZNF253!1.18!62.28!ZNF253;;chr3:44626446..44626477,+!p1@ZNF660!1.18!25.32!ZNF660;;chr13:37494391..37494406,-!p5@SMAD9!1.18!14.20!SMAD9;;chr1:151032957..151032968,+!p7@MLLT11!1.18!14.07!MLLT11;;chr9:77112244..77112262,+!p1@RORB!1.17!15.48!RORB;;chr2:176994408..176994492,+!p1@HOXD8!1.17!13.81!HOXD8;;chr8:93107451..93107468,-!p2@RUNX1T1!1.17!13.68!RUNX1T1;;chr7:19185475..19185487,-!p1@FERD3L!1.16!13.43!FERD3L;;chr4:41750047..41750056,-!p7@PHOX2B!1.16!13.43!PHOX2B;;chr3:52001448..52001478,-!p2@PCBP4!1.15!180.46!PCBP4;;chrX:84499081..84499115,+!p2@ZNF711!1.15!19.18!ZNF711;;chr22:19748231..19748317,+!p1@TBX1!1.15!13.17!TBX1;;chr7:31380292..31380351,-!p1@NEUROD6!1.14!12.92!NEUROD6;;chr18:55102628..55102646,+!p2@ONECUT2!1.14!12.66!ONECUT2;;chr17:41277372..41277418,-!p1@BRCA1!1.13!45.53!BRCA1;;chr6:15401075..15401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A3!0.36!1.28!GATA3;;chr11:125034605..125034636,+!p2@PKNOX2!0.36!1.28!PKNOX2;;chr11:125034640..125034655,+!p1@PKNOX2!0.36!1.28!PKNOX2;;chr15:80696606..80696633,+!p8@ARNT2!0.36!1.28!ARNT2;;chr17:48046642..48046667,+!p3@DLX4!0.36!1.28!DLX4;;chr19:22966893..22966924,-!p2@ZNF99!0.36!1.28!ZNF99;;chr8:41909496..41909512,-!p1@KAT6A!0.35!60.75!KAT6A;;chr5:138629628..138629688,+!p2@MATR3!0.35!48.09!MATR3;;chr19:36706024..36706049,+!p1@ZNF146!0.35!35.68!ZNF146;;chr19:9785743..9785784,-!p1@ZNF562!0.35!29.67!ZNF562;;chr12:53574464..53574539,+!p1@ZNF740!0.35!19.57!ZNF740;;chr7:28220198..28220269,-!p2@JAZF1!0.35!17.78!JAZF1;;chr18:53255415..53255491,-!p1@TCF4!0.35!16.50!TCF4;;chr7:148959269..148959326,+!p1@ZNF783!0.35!16.11!ZNF783;;chr14:74226961..74227020,-!p1@C14orf43!0.35!12.92!C14orf43;;chr19:14800849..14800917,+!p1@ZNF333!0.35!12.53!ZNF333;;chr19:58459047..58459083,-!p1@ZNF256!0.35!9.21!ZNF256;;chr5:133450365..133450444,+!p1@TCF7!0.35!8.57!TCF7;;chr21:47063625..47063658,+!p1@PCBP3!0.35!8.31!PCBP3;;chr3:48282587..48282603,+!p1@ZNF589!0.35!8.31!ZNF589;;chr5:178157651..178157689,-!p1@ZNF354A!0.35!7.67!ZNF354A;;chr6:43337180..43337244,-!p1@ZNF318!0.35!7.16!ZNF318;;chr19:38210622..38210681,-!p1@ZNF607!0.35!7.03!ZNF607;;chr21:27107726..27107772,+!p4@GABPA!0.35!5.76!GABPA;;chr22:20748434..20748455,+!p1@ZNF74!0.35!5.63!ZNF74;;chr19:44809143..44809187,-!p1@ZNF235!0.35!5.37!ZNF235;;chr19:37958318..37958365,-!p2@ZNF569!0.35!4.73!ZNF569;;chr7:99102267..99102304,+!p2@ZKSCAN5!0.35!4.09!ZKSCAN5;;chr6:56954830..56954845,+!p3@ZNF451!0.35!3.71!ZNF451;;chr20:48807171..48807234,+!p4@CEBPB!0.35!3.71!CEBPB;;chr5:180288225..180288243,-!p3@ZFP62!0.35!3.45!ZFP62;;chr7:64254834..64254854,+!p2@ZNF138!0.35!2.94!ZNF138;;chr1:91487629..91487640,-!p7@ZNF644!0.35!2.69!ZNF644;;chr20:50808252..50808264,-!p4@ZFP64!0.35!2.69!ZFP64;;chr6:27356745..27356777,+!p1@ZNF391!0.35!2.56!ZNF391;;chr16:30582888..30582923,-!p3@ZNF688!0.35!2.43!ZNF688;;chr3:44754176..44754196,+!p2@ZNF502!0.35!2.05!ZNF502;;chr17:4890672..4890692,-!p3@CAMTA2!0.35!1.92!CAMTA2;;chr1:27023752..27023799,+!p4@ARID1A!0.35!1.92!ARID1A;;chr6:15245797..15245818,+!p8@JARID2!0.35!1.66!JARID2;;chr8:28748157..28748175,+!p3@HMBOX1!0.35!1.66!HMBOX1;;chr10:64134120..64134183,+!p1@ZNF365!0.35!1.66!ZNF365;;chr2:176032843..176032941,-!p1@ATF2!0.34!82.24!ATF2;;chr5:135468516..135468621,+!p1@SMAD5!0.34!75.33!SMAD5;;chr13:115079949..115080022,+!p1@CHAMP1!0.34!54.87!CHAMP1;;chr5:176449684..176449722,+!p1@ZNF346!0.34!36.96!ZNF346;;chr1:91487553..91487612,-!p1@ZNF644!0.34!33.38!ZNF644;;chr19:11708259..11708309,+!p1@ZNF627!0.34!19.44!ZNF627;;chr6:35227480..35227546,+!p1@ZNF76!0.34!12.53!ZNF76;;chr15:43663214..43663261,-!p@chr15:43663214..43663261,-!0.34!10.87!ZSCAN29;;chr16:29818160..29818188,+!p6@MAZ!0.34!8.70!MAZ;;chr16:2059797..2059837,-!p1@ZNF598!0.34!7.42!ZNF598;;chr8:81398444..81398472,+!p1@ZBTB10!0.34!7.42!ZBTB10;;chr2:242576641..242576731,-!p2@THAP4!0.34!7.03!THAP4;;chr19:12146483..12146546,-!p1@ZNF433!0.34!6.52!ZNF433;;chr19:11071652..11071682,+!p3@SMARCA4!0.34!6.27!SMARCA4;;chr12:6798056..6798102,-!p3@ZNF384!0.34!5.12!ZNF384;;chr12:133707172..133707202,+!p2@ZNF10!0.34!3.84!ZNF10;;chr10:76585205..76585251,+!p3@KAT6B!0.34!3.58!KAT6B;;chr8:116681123..116681143,-!p4@TRPS1!0.34!3.07!TRPS1;;chr10:97889464..97889494,+!p3@ZNF518A!0.34!2.94!ZNF518A;;chr18:47814010..47814021,-!p3@CXXC1!0.34!2.56!CXXC1;;chr12:56583371..56583394,-!p2@SMARCC2!0.34!2.30!SMARCC2;;chr2:148779187..148779222,+!p5@MBD5!0.34!1.79!MBD5;;chr12:51611694..51611719,-!p2@POU6F1!0.34!1.66!POU6F1;;chr1:35658736..35658754,-!p1@SFPQ!0.33!705.08!SFPQ;;chr10:60145155..60145206,+!p1@TFAM!0.33!84.67!TFAM;;chr15:35280439..35280503,-!p1@ZNF770!0.33!66.89!ZNF770;;chr11:118307179..118307223,+!p1@MLL!0.33!59.60!MLL;;chr18:32924372..32924430,-!p1@ZNF24!0.33!58.96!ZNF24;;chr1:53018743..53018777,-!p1@ZCCHC11!0.33!32.74!ZCCHC11;;chr7:77428149..77428220,+!p1@PHTF2!0.33!18.93!PHTF2;;chr7:64023441..64023462,-!p1@ZNF680!0.33!14.84!ZNF680;;chr3:40566428..40566480,+!p1@ZNF621!0.33!14.84!ZNF621;;chr16:69419794..69419830,-!p3@TERF2!0.33!8.70!TERF2;;chr18:5296001..5296045,-!p1@ZFP161!0.33!6.78!ZFP161;;chr19:56915668..56915732,+!p1@ZNF583!0.33!6.39!ZNF583;;
|ffid_belonging_in_development=CL:0000133,CL:0000221,UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=FF:0100932
|fonse_cell_line=FF:0100932
|fonse_cell_line_closure=FF:0100932
|fonse_cell_line_closure=FF:0100932
Line 35: Line 44:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg38.nobarcode.ctss.bed.gz
|id=FF:10508-107D4
|id=FF:10508-107D4
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0102989
|is_a=EFO:0002091;;FF:0000210;;FF:0102989
|is_obsolete=
|library_id=CNhs11276
|library_id_phase_based=2:CNhs11276
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10508
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10508
|name=neuroblastoma cell line:CHP-134
|name=neuroblastoma cell line:CHP-134
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 63:
|profile_cagescan=NCig10062,,,
|profile_cagescan=NCig10062,,,
|profile_hcage=CNhs11276,LSID759,release008,COMPLETED
|profile_hcage=CNhs11276,LSID759,release008,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=107
|rna_box=107
|rna_catalog_number=
|rna_catalog_number=
Line 56: Line 80:
|rna_tube_id=107D4
|rna_tube_id=107D4
|rna_weight_ug=59.164
|rna_weight_ug=59.164
|rnaseq_library_id=RDhi10071
|sample_age=
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=RCB0487
|sample_cell_catalog=RCB0487
|sample_cell_line=CHP-134
|sample_cell_line=CHP-134
Line 69: Line 95:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.72803680563505e-284!GO:0043231;intracellular membrane-bound organelle;6.73662208781873e-257!GO:0043227;membrane-bound organelle;1.91480426750262e-256!GO:0043226;organelle;4.42626346848446e-256!GO:0043229;intracellular organelle;8.9218944342866e-256!GO:0044422;organelle part;5.44549909136978e-151!GO:0044446;intracellular organelle part;8.06131209792233e-150!GO:0005634;nucleus;1.10655918494962e-146!GO:0005737;cytoplasm;4.25261828528587e-132!GO:0032991;macromolecular complex;6.25522755229376e-110!GO:0043170;macromolecule metabolic process;7.27363396493897e-106!GO:0044237;cellular metabolic process;2.78117106828703e-105!GO:0044238;primary metabolic process;4.2937117631897e-103!GO:0030529;ribonucleoprotein complex;2.75218748412283e-98!GO:0003723;RNA binding;3.61666256221732e-96!GO:0044444;cytoplasmic part;6.91880037350848e-96!GO:0044428;nuclear part;4.62881029730065e-92!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.75700905165568e-88!GO:0010467;gene expression;1.48638719218911e-87!GO:0043283;biopolymer metabolic process;8.06511768919782e-86!GO:0043233;organelle lumen;1.91193338355214e-82!GO:0031974;membrane-enclosed lumen;1.91193338355214e-82!GO:0003676;nucleic acid binding;2.85147991274626e-74!GO:0006396;RNA processing;2.1208623741793e-67!GO:0031981;nuclear lumen;6.91268270183557e-57!GO:0005840;ribosome;1.08976414535557e-55!GO:0016070;RNA metabolic process;1.08976414535557e-55!GO:0005739;mitochondrion;7.34563807837575e-55!GO:0043234;protein complex;4.86589516404801e-54!GO:0016043;cellular component organization and biogenesis;4.48719576401592e-53!GO:0016071;mRNA metabolic process;6.61790505761648e-49!GO:0006412;translation;1.67114036052327e-47!GO:0003735;structural constituent of ribosome;7.3748189407284e-47!GO:0008380;RNA splicing;1.03590721388005e-45!GO:0006259;DNA metabolic process;1.36345828696987e-45!GO:0005515;protein binding;1.80064678823618e-44!GO:0006397;mRNA processing;5.5333902759863e-44!GO:0006996;organelle organization and biogenesis;4.94929875726652e-43!GO:0033279;ribosomal subunit;5.01407639568521e-42!GO:0043228;non-membrane-bound organelle;4.1131732392955e-41!GO:0043232;intracellular non-membrane-bound organelle;4.1131732392955e-41!GO:0033036;macromolecule localization;1.37081966500753e-39!GO:0015031;protein transport;2.61196267229436e-39!GO:0031090;organelle membrane;2.61696686138816e-39!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.84719842805395e-37!GO:0044429;mitochondrial part;4.65404878782671e-37!GO:0008104;protein localization;1.09708176943074e-34!GO:0045184;establishment of protein localization;2.23150744250977e-34!GO:0009059;macromolecule biosynthetic process;2.41401234514771e-34!GO:0005654;nucleoplasm;6.35757677988731e-34!GO:0044249;cellular biosynthetic process;1.67187978396316e-33!GO:0031967;organelle envelope;1.01795662217777e-32!GO:0031975;envelope;1.32208264164046e-32!GO:0009058;biosynthetic process;1.96795603831949e-32!GO:0046907;intracellular transport;3.41575807991734e-32!GO:0065003;macromolecular complex assembly;6.9749177657936e-32!GO:0005681;spliceosome;1.04579188898808e-31!GO:0019538;protein metabolic process;1.42322172645823e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.5167128261231e-31!GO:0000166;nucleotide binding;9.95190641726907e-31!GO:0044267;cellular protein metabolic process;1.05352939874784e-29!GO:0044260;cellular macromolecule metabolic process;1.02480400920733e-28!GO:0022607;cellular component assembly;2.77384238333374e-28!GO:0007049;cell cycle;9.29644243285412e-28!GO:0044451;nucleoplasm part;1.96583383936727e-27!GO:0005694;chromosome;3.65229560406068e-27!GO:0006974;response to DNA damage stimulus;2.93013479343542e-26!GO:0006886;intracellular protein transport;3.64279754762266e-26!GO:0051276;chromosome organization and biogenesis;5.59623817553239e-26!GO:0051649;establishment of cellular localization;2.70856742539836e-25!GO:0044445;cytosolic part;9.39482750650764e-25!GO:0051641;cellular localization;1.21063467215298e-24!GO:0006281;DNA repair;1.66124165907624e-24!GO:0005829;cytosol;3.07233397950342e-24!GO:0005730;nucleolus;8.33365260716228e-24!GO:0019866;organelle inner membrane;5.95300396217405e-23!GO:0016462;pyrophosphatase activity;8.97370415811779e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.05465493893581e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;1.35314428182813e-22!GO:0005740;mitochondrial envelope;1.66217374529246e-22!GO:0017111;nucleoside-triphosphatase activity;2.10255726198519e-22!GO:0044427;chromosomal part;2.48288982639587e-22!GO:0015935;small ribosomal subunit;1.1506710384089e-21!GO:0016874;ligase activity;1.54867357336695e-21!GO:0015934;large ribosomal subunit;2.41111192116801e-21!GO:0022402;cell cycle process;2.61886786083341e-21!GO:0031966;mitochondrial membrane;2.94459927838634e-21!GO:0022618;protein-RNA complex assembly;4.27926089185993e-21!GO:0006325;establishment and/or maintenance of chromatin architecture;6.63662247982628e-21!GO:0005743;mitochondrial inner membrane;7.79172269720576e-21!GO:0006512;ubiquitin cycle;4.7108832295929e-20!GO:0006323;DNA packaging;8.26435228753754e-20!GO:0006457;protein folding;1.42368334323681e-19!GO:0032553;ribonucleotide binding;2.14452446594698e-19!GO:0032555;purine ribonucleotide binding;2.14452446594698e-19!GO:0000278;mitotic cell cycle;4.66976233387069e-19!GO:0006119;oxidative phosphorylation;5.28359215879935e-19!GO:0044455;mitochondrial membrane part;8.1705389086463e-19!GO:0008135;translation factor activity, nucleic acid binding;8.95146048031337e-19!GO:0006350;transcription;2.00844630037373e-18!GO:0017076;purine nucleotide binding;2.63535252826554e-18!GO:0031980;mitochondrial lumen;9.58118651109389e-18!GO:0005759;mitochondrial matrix;9.58118651109389e-18!GO:0019222;regulation of metabolic process;1.08659264722335e-17!GO:0042254;ribosome biogenesis and assembly;7.44129814338657e-17!GO:0004386;helicase activity;1.2468940411918e-16!GO:0009719;response to endogenous stimulus;2.21696429917874e-16!GO:0015630;microtubule cytoskeleton;3.43852297840581e-16!GO:0008134;transcription factor binding;3.43852297840581e-16!GO:0032774;RNA biosynthetic process;4.97651999196024e-16!GO:0012505;endomembrane system;6.3745169579761e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;7.49685678972994e-16!GO:0000375;RNA splicing, via transesterification reactions;7.49685678972994e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.49685678972994e-16!GO:0006351;transcription, DNA-dependent;8.34425998300005e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.25881382048493e-15!GO:0032559;adenyl ribonucleotide binding;1.43259268460716e-15!GO:0006333;chromatin assembly or disassembly;1.4457359071155e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.4457359071155e-15!GO:0005524;ATP binding;1.4797135875848e-15!GO:0022403;cell cycle phase;2.00484704806177e-15!GO:0006260;DNA replication;2.00484704806177e-15!GO:0031323;regulation of cellular metabolic process;3.34958562080826e-15!GO:0051301;cell division;3.50572142137408e-15!GO:0010468;regulation of gene expression;3.81366415329388e-15!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.16727553146556e-15!GO:0005746;mitochondrial respiratory chain;5.00210291868439e-15!GO:0016887;ATPase activity;5.14971886411149e-15!GO:0005761;mitochondrial ribosome;8.69438206610085e-15!GO:0000313;organellar ribosome;8.69438206610085e-15!GO:0000087;M phase of mitotic cell cycle;9.59950526514561e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.02046024061013e-14!GO:0016568;chromatin modification;1.11988941288604e-14!GO:0008026;ATP-dependent helicase activity;1.3904878496476e-14!GO:0042623;ATPase activity, coupled;1.5728978137753e-14!GO:0019941;modification-dependent protein catabolic process;1.78336824835474e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.78336824835474e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.81025017356561e-14!GO:0030554;adenyl nucleotide binding;2.16764440311423e-14!GO:0007067;mitosis;2.39118008406247e-14!GO:0003743;translation initiation factor activity;3.26946335654609e-14!GO:0003677;DNA binding;4.33521593324396e-14!GO:0044257;cellular protein catabolic process;5.34889316513375e-14!GO:0005794;Golgi apparatus;6.035123936265e-14!GO:0045449;regulation of transcription;9.97184522385788e-14!GO:0065004;protein-DNA complex assembly;1.39136578496999e-13!GO:0031965;nuclear membrane;2.01566484143277e-13!GO:0016604;nuclear body;2.34033239434889e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.51280115629673e-13!GO:0003954;NADH dehydrogenase activity;2.51280115629673e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.51280115629673e-13!GO:0044453;nuclear membrane part;3.8868439405075e-13!GO:0006413;translational initiation;4.15513444062592e-13!GO:0006399;tRNA metabolic process;4.28231858062327e-13!GO:0051082;unfolded protein binding;5.20598141645382e-13!GO:0006403;RNA localization;6.15654678229926e-13!GO:0006605;protein targeting;7.83104661238008e-13!GO:0044265;cellular macromolecule catabolic process;7.93017827153805e-13!GO:0006355;regulation of transcription, DNA-dependent;8.13208426527032e-13!GO:0000785;chromatin;9.86672997024334e-13!GO:0005643;nuclear pore;9.89038951610587e-13!GO:0050657;nucleic acid transport;1.62409597328259e-12!GO:0051236;establishment of RNA localization;1.62409597328259e-12!GO:0050658;RNA transport;1.62409597328259e-12!GO:0000279;M phase;1.66603616317891e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.03069984877974e-12!GO:0043412;biopolymer modification;3.60425261433256e-12!GO:0008565;protein transporter activity;6.66717240755766e-12!GO:0050794;regulation of cellular process;8.23981510750366e-12!GO:0006364;rRNA processing;9.06234762696113e-12!GO:0042775;organelle ATP synthesis coupled electron transport;9.89794426315155e-12!GO:0042773;ATP synthesis coupled electron transport;9.89794426315155e-12!GO:0048193;Golgi vesicle transport;1.43553906998022e-11!GO:0003712;transcription cofactor activity;1.69142493385476e-11!GO:0016072;rRNA metabolic process;2.07189822805694e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.07189822805694e-11!GO:0045271;respiratory chain complex I;2.07189822805694e-11!GO:0005747;mitochondrial respiratory chain complex I;2.07189822805694e-11!GO:0016607;nuclear speck;2.0815196314363e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.32624005139699e-11!GO:0005635;nuclear envelope;7.71298900639477e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.30732761439902e-11!GO:0065002;intracellular protein transport across a membrane;1.05562337134617e-10!GO:0006446;regulation of translational initiation;1.20370121910521e-10!GO:0043285;biopolymer catabolic process;1.27245068857478e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.2997608868269e-10!GO:0051028;mRNA transport;1.34415783703407e-10!GO:0048770;pigment granule;2.27300129733908e-10!GO:0042470;melanosome;2.27300129733908e-10!GO:0051726;regulation of cell cycle;3.02228206272919e-10!GO:0000074;regulation of progression through cell cycle;3.6595920581098e-10!GO:0030163;protein catabolic process;4.35791948819478e-10!GO:0006464;protein modification process;6.21179417153679e-10!GO:0043566;structure-specific DNA binding;7.0565134281969e-10!GO:0006366;transcription from RNA polymerase II promoter;7.10440615568971e-10!GO:0016192;vesicle-mediated transport;7.2685520291157e-10!GO:0006913;nucleocytoplasmic transport;7.4213868809411e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.91342432528908e-10!GO:0004812;aminoacyl-tRNA ligase activity;7.91342432528908e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.91342432528908e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.14089383979312e-10!GO:0008639;small protein conjugating enzyme activity;8.73216959496092e-10!GO:0019787;small conjugating protein ligase activity;1.14994881650534e-09!GO:0046930;pore complex;1.16257105754578e-09!GO:0004842;ubiquitin-protein ligase activity;1.16552434021194e-09!GO:0051169;nuclear transport;1.52696761766305e-09!GO:0006334;nucleosome assembly;1.78015891014894e-09!GO:0043038;amino acid activation;1.87356397634892e-09!GO:0006418;tRNA aminoacylation for protein translation;1.87356397634892e-09!GO:0043039;tRNA aminoacylation;1.87356397634892e-09!GO:0009057;macromolecule catabolic process;2.1256374904001e-09!GO:0031497;chromatin assembly;2.26817292434892e-09!GO:0016881;acid-amino acid ligase activity;2.50336342443188e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.75759387839206e-09!GO:0005813;centrosome;5.7522616780829e-09!GO:0008270;zinc ion binding;7.58272792076171e-09!GO:0003697;single-stranded DNA binding;8.20568696147297e-09!GO:0006163;purine nucleotide metabolic process;9.45199384585897e-09!GO:0005874;microtubule;1.04911320276929e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.19691237401245e-08!GO:0043687;post-translational protein modification;1.26342355184315e-08!GO:0009259;ribonucleotide metabolic process;1.2704076845585e-08!GO:0000775;chromosome, pericentric region;1.28662881223218e-08!GO:0051186;cofactor metabolic process;1.38754916091721e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.70825498383795e-08!GO:0007017;microtubule-based process;2.22413497870538e-08!GO:0005815;microtubule organizing center;2.28484504832731e-08!GO:0044431;Golgi apparatus part;2.53019696410376e-08!GO:0006164;purine nucleotide biosynthetic process;2.8255448044358e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.07906056696462e-08!GO:0044248;cellular catabolic process;3.2219356574577e-08!GO:0044432;endoplasmic reticulum part;4.23582858207738e-08!GO:0005819;spindle;4.49091282181238e-08!GO:0000245;spliceosome assembly;5.10923265601281e-08!GO:0009150;purine ribonucleotide metabolic process;7.62260415686605e-08!GO:0017038;protein import;1.0099098353026e-07!GO:0050789;regulation of biological process;1.0099098353026e-07!GO:0009260;ribonucleotide biosynthetic process;1.1995963654481e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.31683494412251e-07!GO:0005783;endoplasmic reticulum;1.33722466407991e-07!GO:0006261;DNA-dependent DNA replication;1.46081677427839e-07!GO:0019829;cation-transporting ATPase activity;1.81290124737888e-07!GO:0032446;protein modification by small protein conjugation;2.1430280896322e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.30282351794045e-07!GO:0016741;transferase activity, transferring one-carbon groups;2.39804738331046e-07!GO:0045045;secretory pathway;2.39805815447238e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.49169803396276e-07!GO:0006732;coenzyme metabolic process;2.68305860320005e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.50870221845663e-07!GO:0008168;methyltransferase activity;3.78185113712811e-07!GO:0045333;cellular respiration;5.3586281676694e-07!GO:0003724;RNA helicase activity;6.32389695615716e-07!GO:0016567;protein ubiquitination;6.32913266507034e-07!GO:0005667;transcription factor complex;6.6638759850057e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.65514023095324e-07!GO:0015986;ATP synthesis coupled proton transport;8.16771186376286e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.16771186376286e-07!GO:0015631;tubulin binding;8.32161626818691e-07!GO:0043623;cellular protein complex assembly;8.32161626818691e-07!GO:0016779;nucleotidyltransferase activity;9.19504393393334e-07!GO:0009141;nucleoside triphosphate metabolic process;1.07607590916877e-06!GO:0000139;Golgi membrane;1.29839883746853e-06!GO:0051427;hormone receptor binding;1.36608567473401e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.40154657001193e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.40154657001193e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.46189803758531e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.46189803758531e-06!GO:0008094;DNA-dependent ATPase activity;1.52431586236646e-06!GO:0046914;transition metal ion binding;1.62460705432768e-06!GO:0009060;aerobic respiration;1.84951834104118e-06!GO:0000151;ubiquitin ligase complex;1.86391000225789e-06!GO:0016363;nuclear matrix;1.87903795952673e-06!GO:0003713;transcription coactivator activity;2.04479781328478e-06!GO:0051329;interphase of mitotic cell cycle;2.48822186384433e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.67828509619915e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.67828509619915e-06!GO:0003899;DNA-directed RNA polymerase activity;2.72813791653913e-06!GO:0003690;double-stranded DNA binding;2.78475396683553e-06!GO:0003682;chromatin binding;2.80694414007751e-06!GO:0045259;proton-transporting ATP synthase complex;3.01604390194056e-06!GO:0035257;nuclear hormone receptor binding;3.20723264006085e-06!GO:0007051;spindle organization and biogenesis;4.82550861164519e-06!GO:0046034;ATP metabolic process;5.19612003999695e-06!GO:0006613;cotranslational protein targeting to membrane;5.84026358700028e-06!GO:0005793;ER-Golgi intermediate compartment;6.10665184361704e-06!GO:0051188;cofactor biosynthetic process;8.35843108613054e-06!GO:0006461;protein complex assembly;8.39836964964845e-06!GO:0006754;ATP biosynthetic process;8.57176460731309e-06!GO:0006753;nucleoside phosphate metabolic process;8.57176460731309e-06!GO:0031988;membrane-bound vesicle;1.01748880947272e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.07846826610284e-05!GO:0016740;transferase activity;1.08013320947097e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.14499880859575e-05!GO:0005762;mitochondrial large ribosomal subunit;1.16815115718748e-05!GO:0000315;organellar large ribosomal subunit;1.16815115718748e-05!GO:0000776;kinetochore;1.25195904360794e-05!GO:0051325;interphase;1.38608876765972e-05!GO:0048475;coated membrane;1.38966861595594e-05!GO:0030117;membrane coat;1.38966861595594e-05!GO:0000075;cell cycle checkpoint;1.44961113688973e-05!GO:0003924;GTPase activity;1.57332274658249e-05!GO:0007005;mitochondrion organization and biogenesis;1.59962601329813e-05!GO:0051168;nuclear export;1.62574848551606e-05!GO:0006752;group transfer coenzyme metabolic process;1.69747920724811e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.70480425736785e-05!GO:0005789;endoplasmic reticulum membrane;1.71990196591323e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.71990196591323e-05!GO:0003729;mRNA binding;1.71990196591323e-05!GO:0007059;chromosome segregation;1.74031519485458e-05!GO:0006302;double-strand break repair;1.90969877246643e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.07949373211097e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;2.50215901630907e-05!GO:0005657;replication fork;2.62600223446263e-05!GO:0003684;damaged DNA binding;2.69831938107145e-05!GO:0044452;nucleolar part;3.01590697609386e-05!GO:0016564;transcription repressor activity;3.06975519681531e-05!GO:0005525;GTP binding;3.2751864046612e-05!GO:0000314;organellar small ribosomal subunit;3.65196284590871e-05!GO:0005763;mitochondrial small ribosomal subunit;3.65196284590871e-05!GO:0008033;tRNA processing;3.65692514312769e-05!GO:0003678;DNA helicase activity;3.91420196605242e-05!GO:0043681;protein import into mitochondrion;4.02034753588046e-05!GO:0008017;microtubule binding;4.09023306950321e-05!GO:0009108;coenzyme biosynthetic process;4.11884327376871e-05!GO:0016853;isomerase activity;4.36092640444593e-05!GO:0009055;electron carrier activity;4.7112970924375e-05!GO:0043021;ribonucleoprotein binding;4.8022081953219e-05!GO:0006383;transcription from RNA polymerase III promoter;4.83025052904647e-05!GO:0008186;RNA-dependent ATPase activity;4.94451724950373e-05!GO:0031982;vesicle;6.25165983571425e-05!GO:0008654;phospholipid biosynthetic process;6.65876659295757e-05!GO:0044440;endosomal part;7.20090986513445e-05!GO:0010008;endosome membrane;7.20090986513445e-05!GO:0031410;cytoplasmic vesicle;7.26154247546448e-05!GO:0006352;transcription initiation;7.26154247546448e-05!GO:0045786;negative regulation of progression through cell cycle;8.92672719970495e-05!GO:0006310;DNA recombination;0.000112111023715818!GO:0000059;protein import into nucleus, docking;0.000119459753937249!GO:0000786;nucleosome;0.000125417102961696!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000126372378046746!GO:0006606;protein import into nucleus;0.000150172580363055!GO:0000049;tRNA binding;0.000157596295769099!GO:0007010;cytoskeleton organization and biogenesis;0.000161406120435323!GO:0004004;ATP-dependent RNA helicase activity;0.000161406120435323!GO:0032561;guanyl ribonucleotide binding;0.00016419744860426!GO:0019001;guanyl nucleotide binding;0.00016419744860426!GO:0051087;chaperone binding;0.00016795532061252!GO:0006099;tricarboxylic acid cycle;0.000171835457265243!GO:0046356;acetyl-CoA catabolic process;0.000171835457265243!GO:0005876;spindle microtubule;0.000190827366901325!GO:0046474;glycerophospholipid biosynthetic process;0.000193537263088761!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000204897909354041!GO:0003714;transcription corepressor activity;0.000210690551572838!GO:0009109;coenzyme catabolic process;0.000215162482310604!GO:0016251;general RNA polymerase II transcription factor activity;0.000216272597502381!GO:0016563;transcription activator activity;0.000220615819534752!GO:0051170;nuclear import;0.000230183499063698!GO:0006338;chromatin remodeling;0.000233979330583782!GO:0030521;androgen receptor signaling pathway;0.000237845505582155!GO:0008276;protein methyltransferase activity;0.000241874551450837!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000249419352134521!GO:0009117;nucleotide metabolic process;0.000269873963729244!GO:0016859;cis-trans isomerase activity;0.000286553850157248!GO:0030120;vesicle coat;0.000298092813726911!GO:0030662;coated vesicle membrane;0.000298092813726911!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000314809992980579!GO:0006414;translational elongation;0.000319367427572755!GO:0005768;endosome;0.000320267371454026!GO:0000228;nuclear chromosome;0.000328821181653496!GO:0000792;heterochromatin;0.000329645422571339!GO:0006084;acetyl-CoA metabolic process;0.000350450372335226!GO:0005798;Golgi-associated vesicle;0.000375877937334009!GO:0048471;perinuclear region of cytoplasm;0.000402996415504513!GO:0005875;microtubule associated complex;0.000414273602152396!GO:0035258;steroid hormone receptor binding;0.000428054421866926!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.000429032711828662!GO:0031072;heat shock protein binding;0.000505950143088983!GO:0030880;RNA polymerase complex;0.000523433662341439!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000528154224294433!GO:0032940;secretion by cell;0.000578633070754037!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000578633070754037!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000604058111340199!GO:0051187;cofactor catabolic process;0.000644256136530375!GO:0005788;endoplasmic reticulum lumen;0.000649445601066285!GO:0032508;DNA duplex unwinding;0.000663015249871675!GO:0032392;DNA geometric change;0.000663015249871675!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000725327270130468!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000736037744588119!GO:0006891;intra-Golgi vesicle-mediated transport;0.000757231732556611!GO:0008250;oligosaccharyl transferase complex;0.00076507032560712!GO:0048500;signal recognition particle;0.000787898648192603!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000821906853444431!GO:0006612;protein targeting to membrane;0.000830186854712403!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000830186854712403!GO:0032259;methylation;0.000848114387784726!GO:0007052;mitotic spindle organization and biogenesis;0.000923992622127518!GO:0003711;transcription elongation regulator activity;0.000954735754006734!GO:0046489;phosphoinositide biosynthetic process;0.000965508477227397!GO:0031324;negative regulation of cellular metabolic process;0.000972887827124461!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00101101171337725!GO:0032200;telomere organization and biogenesis;0.00101101171337725!GO:0000723;telomere maintenance;0.00101101171337725!GO:0004576;oligosaccharyl transferase activity;0.00102769648823216!GO:0006626;protein targeting to mitochondrion;0.00114684841626585!GO:0003746;translation elongation factor activity;0.00120093441093449!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0012027147259635!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00120428972216036!GO:0000428;DNA-directed RNA polymerase complex;0.00120428972216036!GO:0006405;RNA export from nucleus;0.00127807016339322!GO:0007006;mitochondrial membrane organization and biogenesis;0.00128350348010974!GO:0006793;phosphorus metabolic process;0.00130397805689891!GO:0006796;phosphate metabolic process;0.00130397805689891!GO:0009892;negative regulation of metabolic process;0.00131784615028523!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0014445093473152!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0014445093473152!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0014445093473152!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00148523643009334!GO:0005770;late endosome;0.00149913701318838!GO:0005684;U2-dependent spliceosome;0.00151308105146721!GO:0004527;exonuclease activity;0.00152656016567993!GO:0046467;membrane lipid biosynthetic process;0.00153275157128029!GO:0044450;microtubule organizing center part;0.00160183847091949!GO:0051052;regulation of DNA metabolic process;0.00160925309497322!GO:0007004;telomere maintenance via telomerase;0.00162521133998672!GO:0008022;protein C-terminus binding;0.00163491570788094!GO:0008312;7S RNA binding;0.00165042625665535!GO:0030384;phosphoinositide metabolic process;0.00167364771749684!GO:0019783;small conjugating protein-specific protease activity;0.00173757781641189!GO:0008287;protein serine/threonine phosphatase complex;0.00174256106732226!GO:0016481;negative regulation of transcription;0.00191997324429657!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0020319398505144!GO:0051246;regulation of protein metabolic process;0.00206870443369864!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00212894515190599!GO:0006268;DNA unwinding during replication;0.00215372195892979!GO:0006289;nucleotide-excision repair;0.00247304185266699!GO:0004843;ubiquitin-specific protease activity;0.0025507010931246!GO:0005048;signal sequence binding;0.00259327438177683!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0026593651440134!GO:0045047;protein targeting to ER;0.0026593651440134!GO:0006650;glycerophospholipid metabolic process;0.00277670238598557!GO:0051920;peroxiredoxin activity;0.0027991078824657!GO:0007093;mitotic cell cycle checkpoint;0.0028363173743827!GO:0005637;nuclear inner membrane;0.00291658888207838!GO:0018196;peptidyl-asparagine modification;0.00295701574329632!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00295701574329632!GO:0030518;steroid hormone receptor signaling pathway;0.00295701574329632!GO:0004221;ubiquitin thiolesterase activity;0.00295701574329632!GO:0000209;protein polyubiquitination;0.00295701574329632!GO:0006378;mRNA polyadenylation;0.00298065285073517!GO:0016584;nucleosome positioning;0.00304922147979175!GO:0016272;prefoldin complex;0.00312626646663054!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00314601552709179!GO:0000082;G1/S transition of mitotic cell cycle;0.00314603461285317!GO:0009165;nucleotide biosynthetic process;0.00320636554891051!GO:0045454;cell redox homeostasis;0.00322228248139898!GO:0033116;ER-Golgi intermediate compartment membrane;0.00347758313211798!GO:0031124;mRNA 3'-end processing;0.0034793220446745!GO:0004674;protein serine/threonine kinase activity;0.00350342972757244!GO:0009116;nucleoside metabolic process;0.00350342972757244!GO:0006839;mitochondrial transport;0.00354635973764977!GO:0006284;base-excision repair;0.00358067060401647!GO:0008139;nuclear localization sequence binding;0.00360982627199333!GO:0006400;tRNA modification;0.00376611077523278!GO:0006611;protein export from nucleus;0.00382620577191773!GO:0042054;histone methyltransferase activity;0.00382620577191773!GO:0009056;catabolic process;0.0038802343363173!GO:0016279;protein-lysine N-methyltransferase activity;0.00390228802408415!GO:0018024;histone-lysine N-methyltransferase activity;0.00390228802408415!GO:0016278;lysine N-methyltransferase activity;0.00390228802408415!GO:0030176;integral to endoplasmic reticulum membrane;0.00391849063262281!GO:0050681;androgen receptor binding;0.0039401427595929!GO:0008652;amino acid biosynthetic process;0.00413397787031765!GO:0004003;ATP-dependent DNA helicase activity;0.00414851423336835!GO:0030134;ER to Golgi transport vesicle;0.00422120323452782!GO:0007018;microtubule-based movement;0.0044478641534854!GO:0043414;biopolymer methylation;0.00483080107808579!GO:0000910;cytokinesis;0.0049062326126779!GO:0006505;GPI anchor metabolic process;0.00492387816054055!GO:0006278;RNA-dependent DNA replication;0.00500544929216355!GO:0005669;transcription factor TFIID complex;0.00504111122253226!GO:0007019;microtubule depolymerization;0.00523068760620492!GO:0005839;proteasome core complex (sensu Eukaryota);0.00540274286479939!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00546079990651363!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00546079990651363!GO:0004518;nuclease activity;0.00547655361708282!GO:0000339;RNA cap binding;0.00562287843088511!GO:0051789;response to protein stimulus;0.00572410472279461!GO:0006986;response to unfolded protein;0.00572410472279461!GO:0031123;RNA 3'-end processing;0.00586231881475933!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00601986364603314!GO:0016790;thiolester hydrolase activity;0.00608906746799081!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00624511427648103!GO:0000725;recombinational repair;0.00625437573581275!GO:0000724;double-strand break repair via homologous recombination;0.00625437573581275!GO:0016310;phosphorylation;0.00625437573581275!GO:0030135;coated vesicle;0.00632506727357427!GO:0000096;sulfur amino acid metabolic process;0.00658759187624329!GO:0065007;biological regulation;0.00659738882420319!GO:0019843;rRNA binding;0.00659825920396918!GO:0031570;DNA integrity checkpoint;0.00680817785919448!GO:0000922;spindle pole;0.00680817785919448!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00684727927825707!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00684727927825707!GO:0015399;primary active transmembrane transporter activity;0.00684727927825707!GO:0030663;COPI coated vesicle membrane;0.00684727927825707!GO:0030126;COPI vesicle coat;0.00684727927825707!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00685082938240479!GO:0015002;heme-copper terminal oxidase activity;0.00685082938240479!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00685082938240479!GO:0004129;cytochrome-c oxidase activity;0.00685082938240479!GO:0005758;mitochondrial intermembrane space;0.00688255124108641!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0069759173639504!GO:0030127;COPII vesicle coat;0.00710432757672867!GO:0012507;ER to Golgi transport vesicle membrane;0.00710432757672867!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00713154964208203!GO:0006984;ER-nuclear signaling pathway;0.00721000704828308!GO:0040029;regulation of gene expression, epigenetic;0.00738100200758701!GO:0000781;chromosome, telomeric region;0.00738100200758701!GO:0030137;COPI-coated vesicle;0.0074372025107313!GO:0008170;N-methyltransferase activity;0.00749456921855432!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00777210408660158!GO:0006506;GPI anchor biosynthetic process;0.00798201758752305!GO:0009451;RNA modification;0.00802879602452353!GO:0048487;beta-tubulin binding;0.00839764458216903!GO:0008097;5S rRNA binding;0.00846441440528267!GO:0005832;chaperonin-containing T-complex;0.00849738499325656!GO:0005869;dynactin complex;0.00855401561859102!GO:0051539;4 iron, 4 sulfur cluster binding;0.0086109840049095!GO:0003702;RNA polymerase II transcription factor activity;0.00871083629803439!GO:0008180;signalosome;0.0087141377252208!GO:0043022;ribosome binding;0.00926081359341773!GO:0006402;mRNA catabolic process;0.00960535194585444!GO:0006607;NLS-bearing substrate import into nucleus;0.00972397406858375!GO:0003730;mRNA 3'-UTR binding;0.00992490740803039!GO:0044454;nuclear chromosome part;0.0102201826794844!GO:0000287;magnesium ion binding;0.0102903028020544!GO:0005769;early endosome;0.0105122773125676!GO:0006376;mRNA splice site selection;0.0105949388143927!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0105949388143927!GO:0031902;late endosome membrane;0.0106047099896909!GO:0007088;regulation of mitosis;0.0106102771352039!GO:0031970;organelle envelope lumen;0.0106459620191499!GO:0006595;polyamine metabolic process;0.0107692536691419!GO:0006730;one-carbon compound metabolic process;0.0108682238406447!GO:0004298;threonine endopeptidase activity;0.0111024554305784!GO:0015980;energy derivation by oxidation of organic compounds;0.0113101488254839!GO:0046966;thyroid hormone receptor binding;0.0115043256111532!GO:0019887;protein kinase regulator activity;0.011683880939631!GO:0000097;sulfur amino acid biosynthetic process;0.0119120510394676!GO:0000152;nuclear ubiquitin ligase complex;0.0124198941666991!GO:0007569;cell aging;0.0124198941666991!GO:0030496;midbody;0.0127288474302987!GO:0046128;purine ribonucleoside metabolic process;0.0128261906937204!GO:0042278;purine nucleoside metabolic process;0.0128261906937204!GO:0016585;chromatin remodeling complex;0.0130742825763362!GO:0004722;protein serine/threonine phosphatase activity;0.0131426767867661!GO:0043631;RNA polyadenylation;0.0132630648366058!GO:0030867;rough endoplasmic reticulum membrane;0.0133865584814703!GO:0005881;cytoplasmic microtubule;0.0135108954093926!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0137540675122538!GO:0006144;purine base metabolic process;0.0141260770483605!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.014784844070413!GO:0000123;histone acetyltransferase complex;0.0149921211489297!GO:0043189;H4/H2A histone acetyltransferase complex;0.015014596325602!GO:0031301;integral to organelle membrane;0.015284904024449!GO:0004532;exoribonuclease activity;0.0152908264547243!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0152908264547243!GO:0030145;manganese ion binding;0.0154871578197625!GO:0031114;regulation of microtubule depolymerization;0.0154871578197625!GO:0007026;negative regulation of microtubule depolymerization;0.0154871578197625!GO:0042393;histone binding;0.0157059207541678!GO:0006301;postreplication repair;0.0157777626801964!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0158014561183545!GO:0045039;protein import into mitochondrial inner membrane;0.0158014561183545!GO:0000790;nuclear chromatin;0.015888951441997!GO:0006497;protein amino acid lipidation;0.0159488571672236!GO:0005853;eukaryotic translation elongation factor 1 complex;0.016185272888286!GO:0030522;intracellular receptor-mediated signaling pathway;0.0168267588060468!GO:0007021;tubulin folding;0.0171234121590556!GO:0019899;enzyme binding;0.0173603002244411!GO:0000178;exosome (RNase complex);0.0174528431406763!GO:0006270;DNA replication initiation;0.0177403521167374!GO:0000726;non-recombinational repair;0.0179037567876449!GO:0015992;proton transport;0.0182050149388522!GO:0005741;mitochondrial outer membrane;0.0183387254434977!GO:0051540;metal cluster binding;0.0183387254434977!GO:0051536;iron-sulfur cluster binding;0.0183387254434977!GO:0045892;negative regulation of transcription, DNA-dependent;0.0186020953833753!GO:0006401;RNA catabolic process;0.0186743648456179!GO:0016569;covalent chromatin modification;0.0187865352816629!GO:0005720;nuclear heterochromatin;0.0188515713884581!GO:0051287;NAD binding;0.0194743247152765!GO:0006818;hydrogen transport;0.0203557218615454!GO:0042809;vitamin D receptor binding;0.020699227211071!GO:0000819;sister chromatid segregation;0.0207080954958422!GO:0000118;histone deacetylase complex;0.0208334048792865!GO:0006220;pyrimidine nucleotide metabolic process;0.021008686432479!GO:0035267;NuA4 histone acetyltransferase complex;0.021305526897345!GO:0051128;regulation of cellular component organization and biogenesis;0.0217590274272369!GO:0000930;gamma-tubulin complex;0.0219790004031451!GO:0042770;DNA damage response, signal transduction;0.022218444146616!GO:0004523;ribonuclease H activity;0.0223749467478451!GO:0003756;protein disulfide isomerase activity;0.0234050031115476!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0234050031115476!GO:0043596;nuclear replication fork;0.0237015949272066!GO:0043284;biopolymer biosynthetic process;0.0239793341224504!GO:0009070;serine family amino acid biosynthetic process;0.024339211839634!GO:0000077;DNA damage checkpoint;0.0248207827981117!GO:0005784;translocon complex;0.0258199416956583!GO:0030118;clathrin coat;0.0268291977453357!GO:0008213;protein amino acid alkylation;0.0269317321936101!GO:0006479;protein amino acid methylation;0.0269317321936101!GO:0019867;outer membrane;0.0274798524210469!GO:0042585;germinal vesicle;0.0277715037815428!GO:0031901;early endosome membrane;0.0290628754684428!GO:0043624;cellular protein complex disassembly;0.0295164058300784!GO:0005905;coated pit;0.0307979184323479!GO:0016787;hydrolase activity;0.0314515560270678!GO:0019207;kinase regulator activity;0.0317345225286692!GO:0006406;mRNA export from nucleus;0.031873180475326!GO:0000070;mitotic sister chromatid segregation;0.0319020739251642!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0319443444633385!GO:0032984;macromolecular complex disassembly;0.0324056874157394!GO:0031968;organelle outer membrane;0.0326838351269493!GO:0031371;ubiquitin conjugating enzyme complex;0.0332983767961343!GO:0045947;negative regulation of translational initiation;0.034971336155078!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0351351122724986!GO:0016311;dephosphorylation;0.0352267887870105!GO:0022884;macromolecule transmembrane transporter activity;0.0361419368575119!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0361419368575119!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0364140720353568!GO:0005844;polysome;0.0382589063449038!GO:0007050;cell cycle arrest;0.038389765728218!GO:0045502;dynein binding;0.0384856905595094!GO:0000805;X chromosome;0.0389784904175782!GO:0001740;Barr body;0.0389784904175782!GO:0030658;transport vesicle membrane;0.0396503337794206!GO:0005680;anaphase-promoting complex;0.0402580258400269!GO:0017134;fibroblast growth factor binding;0.0404369162251536!GO:0009112;nucleobase metabolic process;0.0406744640680675!GO:0008320;protein transmembrane transporter activity;0.0413451276767719!GO:0032039;integrator complex;0.0416624623223206!GO:0017119;Golgi transport complex;0.0417649130335094!GO:0051297;centrosome organization and biogenesis;0.0425863957184271!GO:0031023;microtubule organizing center organization and biogenesis;0.0425863957184271!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0437459538216149!GO:0048489;synaptic vesicle transport;0.0437459538216149!GO:0050773;regulation of dendrite development;0.0441398091190957!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0444350733665288!GO:0030983;mismatched DNA binding;0.044549184856952!GO:0000793;condensed chromosome;0.0445572380296865!GO:0030742;GTP-dependent protein binding;0.0446767340856585!GO:0009303;rRNA transcription;0.0447071216215393!GO:0043492;ATPase activity, coupled to movement of substances;0.0448206014784129!GO:0006564;L-serine biosynthetic process;0.0454635167316118!GO:0016570;histone modification;0.045635250476082!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0472209453245853!GO:0010257;NADH dehydrogenase complex assembly;0.0472209453245853!GO:0033108;mitochondrial respiratory chain complex assembly;0.0472209453245853!GO:0048523;negative regulation of cellular process;0.0472411811612772!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0477350635135644!GO:0005732;small nucleolar ribonucleoprotein complex;0.0477350635135644!GO:0042158;lipoprotein biosynthetic process;0.0482049179022556!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0491058087089217!GO:0022406;membrane docking;0.0494123530214103!GO:0048278;vesicle docking;0.0494123530214103!GO:0008408;3'-5' exonuclease activity;0.0496694720748015!GO:0004239;methionyl aminopeptidase activity;0.0499412607828914
|sample_id=10508
|sample_id=10508
|sample_note=
|sample_note=
Line 76: Line 103:
|sample_tissue=adrenal gland
|sample_tissue=adrenal gland
|top_motifs=NANOG:3.28189506867;AHR_ARNT_ARNT2:2.84583300352;YY1:2.53935277457;BREu{core}:2.22815425639;POU6F1:2.21516437614;POU1F1:2.13093653615;FOXM1:2.05223480301;ZNF143:1.99906029401;STAT1,3:1.92970435234;PITX1..3:1.92274490106;LHX3,4:1.89962262085;PRRX1,2:1.89924766956;FOXP1:1.89632669697;ADNP_IRX_SIX_ZHX:1.8913665302;NRF1:1.88237086039;ELK1,4_GABP{A,B1}:1.85184774936;LEF1_TCF7_TCF7L1,2:1.84076983831;NKX6-1,2:1.72792726903;CDC5L:1.63178778191;NFY{A,B,C}:1.62016651912;PATZ1:1.61486912814;CRX:1.53077110486;CUX2:1.52524585891;GFI1:1.51075615073;SOX17:1.49881433202;FOX{I1,J2}:1.41947663102;NHLH1,2:1.40730533163;ZFP161:1.38770109017;SOX2:1.37150247076;OCT4_SOX2{dimer}:1.34763953815;TFDP1:1.34008303657;TOPORS:1.28719110893;E2F1..5:1.2823161337;MED-1{core}:1.25575921686;SOX{8,9,10}:1.24132448529;ARID5B:1.22029243298;MZF1:1.20622764795;AIRE:1.19227185332;NKX2-3_NKX2-5:1.12395560669;bHLH_family:1.11513470701;FOXA2:1.10838714905;RREB1:1.10773215398;ZIC1..3:1.07609318691;PAX3,7:1.04605801596;PAX4:1.0303212575;PAX5:1.00676536343;JUN:0.981632043962;RFX1:0.950924146551;RFX2..5_RFXANK_RFXAP:0.950862476668;REST:0.94005597358;VSX1,2:0.938144143518;TAL1_TCF{3,4,12}:0.921958616244;POU3F1..4:0.919319937258;HOXA9_MEIS1:0.897194622995;NKX2-1,4:0.879177496499;MTE{core}:0.878213013424;CREB1:0.850034018604;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.798643835174;TFAP2B:0.788109385586;GTF2I:0.763290374898;EVI1:0.723213958275;EGR1..3:0.713190023045;RBPJ:0.687386567627;ATF2:0.679090191485;RORA:0.672293181307;NR1H4:0.654174617559;ONECUT1,2:0.580041210481;MYB:0.545427600848;ATF4:0.540835904489;HIC1:0.511828955013;CDX1,2,4:0.49183434999;ATF5_CREB3:0.490408857936;GFI1B:0.479498071779;PAX6:0.477421847163;EN1,2:0.470225533491;TGIF1:0.462590820245;ZBTB16:0.46225970839;PAX1,9:0.460766263921;SOX5:0.451048312304;MYFfamily:0.434900579795;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.383614059801;BPTF:0.344995724887;PRDM1:0.34449098719;CEBPA,B_DDIT3:0.282978942265;MAZ:0.253488877032;PDX1:0.243431326717;GATA6:0.227906575016;ZNF384:0.182384633734;PBX1:0.174178591751;DBP:0.173110022533;ESRRA:0.159145808025;RXR{A,B,G}:0.142775856914;FOXD3:0.102409711878;POU2F1..3:0.0641839032569;TEF:0.0565475472658;HAND1,2:0.0531189383593;GATA4:0.0399218813271;MYOD1:0.0363091503404;HOX{A5,B5}:0.0343899054768;NR6A1:0.0255729976406;ZBTB6:0.0209554227928;HNF1A:-0.0132496604133;ZNF423:-0.0220952114417;PPARG:-0.0965398342734;MEF2{A,B,C,D}:-0.12227302406;HOX{A6,A7,B6,B7}:-0.122495677343;MYBL2:-0.12481474422;FOXL1:-0.133650601053;GTF2A1,2:-0.165890640926;FOXN1:-0.178033181417;HOX{A4,D4}:-0.182365186094;HIF1A:-0.190508216998;PAX8:-0.193958813961;KLF4:-0.200987915332;HBP1_HMGB_SSRP1_UBTF:-0.214890588217;SREBF1,2:-0.225693666435;FOXP3:-0.24388928509;POU5F1:-0.245745013214;HLF:-0.256730649443;TP53:-0.27498321889;ZEB1:-0.315417381523;STAT5{A,B}:-0.316713136703;NKX3-1:-0.341682778814;XCPE1{core}:-0.360970498519;LMO2:-0.379158268343;FOX{F1,F2,J1}:-0.380182329394;SMAD1..7,9:-0.381730709945;ALX1:-0.398284334101;AR:-0.406175622946;NR3C1:-0.420118544873;FOSL2:-0.421931047157;ELF1,2,4:-0.438076042644;NFIX:-0.447338779862;MTF1:-0.465902488245;NANOG{mouse}:-0.49316927708;NKX2-2,8:-0.504809722961;TBX4,5:-0.505520553121;PAX2:-0.508492982973;HMGA1,2:-0.533183431963;FOXQ1:-0.575923400416;SNAI1..3:-0.602200219119;NFIL3:-0.634302545173;IKZF2:-0.672207468766;NR5A1,2:-0.675150841274;NFKB1_REL_RELA:-0.683759788753;EP300:-0.687681572652;FOS_FOS{B,L1}_JUN{B,D}:-0.708165457188;UFEwm:-0.714068295594;HES1:-0.717080776056;NFE2:-0.720843639285;TLX1..3_NFIC{dimer}:-0.727533766935;DMAP1_NCOR{1,2}_SMARC:-0.729535812462;SPIB:-0.750416319112;BACH2:-0.767288535197;GZF1:-0.769869173983;HNF4A_NR2F1,2:-0.782638624189;ZNF148:-0.784954946448;T:-0.785559546372;NFE2L2:-0.795830062798;XBP1:-0.800066468367;RUNX1..3:-0.80202523952;SPI1:-0.853975335608;ATF6:-0.856371854416;FOX{D1,D2}:-0.901822345069;TFAP2{A,C}:-0.919938049036;NFE2L1:-0.951863556822;ETS1,2:-1.01834555481;NKX3-2:-1.03100151098;MAFB:-1.06698887245;TEAD1:-1.09769773781;ZNF238:-1.13670107806;TBP:-1.17607771183;NFATC1..3:-1.18827033177;SP1:-1.21388167455;IKZF1:-1.28676163872;FOXO1,3,4:-1.37618894968;IRF1,2:-1.41814709549;EBF1:-1.45674322666;TFAP4:-1.46254509387;IRF7:-1.47962293385;ESR1:-1.57088342769;TLX2:-1.57438551072;GCM1,2:-1.58017462112;HMX1:-1.60965014857;SPZ1:-1.62134890823;GLI1..3:-1.62206108778;ALX4:-1.68883745755;SRF:-1.82022966594;HSF1,2:-1.96491822015;TFCP2:-1.98502961508;STAT2,4,6:-2.03557153708;RXRA_VDR{dimer}:-2.0744041141
|top_motifs=NANOG:3.28189506867;AHR_ARNT_ARNT2:2.84583300352;YY1:2.53935277457;BREu{core}:2.22815425639;POU6F1:2.21516437614;POU1F1:2.13093653615;FOXM1:2.05223480301;ZNF143:1.99906029401;STAT1,3:1.92970435234;PITX1..3:1.92274490106;LHX3,4:1.89962262085;PRRX1,2:1.89924766956;FOXP1:1.89632669697;ADNP_IRX_SIX_ZHX:1.8913665302;NRF1:1.88237086039;ELK1,4_GABP{A,B1}:1.85184774936;LEF1_TCF7_TCF7L1,2:1.84076983831;NKX6-1,2:1.72792726903;CDC5L:1.63178778191;NFY{A,B,C}:1.62016651912;PATZ1:1.61486912814;CRX:1.53077110486;CUX2:1.52524585891;GFI1:1.51075615073;SOX17:1.49881433202;FOX{I1,J2}:1.41947663102;NHLH1,2:1.40730533163;ZFP161:1.38770109017;SOX2:1.37150247076;OCT4_SOX2{dimer}:1.34763953815;TFDP1:1.34008303657;TOPORS:1.28719110893;E2F1..5:1.2823161337;MED-1{core}:1.25575921686;SOX{8,9,10}:1.24132448529;ARID5B:1.22029243298;MZF1:1.20622764795;AIRE:1.19227185332;NKX2-3_NKX2-5:1.12395560669;bHLH_family:1.11513470701;FOXA2:1.10838714905;RREB1:1.10773215398;ZIC1..3:1.07609318691;PAX3,7:1.04605801596;PAX4:1.0303212575;PAX5:1.00676536343;JUN:0.981632043962;RFX1:0.950924146551;RFX2..5_RFXANK_RFXAP:0.950862476668;REST:0.94005597358;VSX1,2:0.938144143518;TAL1_TCF{3,4,12}:0.921958616244;POU3F1..4:0.919319937258;HOXA9_MEIS1:0.897194622995;NKX2-1,4:0.879177496499;MTE{core}:0.878213013424;CREB1:0.850034018604;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.798643835174;TFAP2B:0.788109385586;GTF2I:0.763290374898;EVI1:0.723213958275;EGR1..3:0.713190023045;RBPJ:0.687386567627;ATF2:0.679090191485;RORA:0.672293181307;NR1H4:0.654174617559;ONECUT1,2:0.580041210481;MYB:0.545427600848;ATF4:0.540835904489;HIC1:0.511828955013;CDX1,2,4:0.49183434999;ATF5_CREB3:0.490408857936;GFI1B:0.479498071779;PAX6:0.477421847163;EN1,2:0.470225533491;TGIF1:0.462590820245;ZBTB16:0.46225970839;PAX1,9:0.460766263921;SOX5:0.451048312304;MYFfamily:0.434900579795;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.383614059801;BPTF:0.344995724887;PRDM1:0.34449098719;CEBPA,B_DDIT3:0.282978942265;MAZ:0.253488877032;PDX1:0.243431326717;GATA6:0.227906575016;ZNF384:0.182384633734;PBX1:0.174178591751;DBP:0.173110022533;ESRRA:0.159145808025;RXR{A,B,G}:0.142775856914;FOXD3:0.102409711878;POU2F1..3:0.0641839032569;TEF:0.0565475472658;HAND1,2:0.0531189383593;GATA4:0.0399218813271;MYOD1:0.0363091503404;HOX{A5,B5}:0.0343899054768;NR6A1:0.0255729976406;ZBTB6:0.0209554227928;HNF1A:-0.0132496604133;ZNF423:-0.0220952114417;PPARG:-0.0965398342734;MEF2{A,B,C,D}:-0.12227302406;HOX{A6,A7,B6,B7}:-0.122495677343;MYBL2:-0.12481474422;FOXL1:-0.133650601053;GTF2A1,2:-0.165890640926;FOXN1:-0.178033181417;HOX{A4,D4}:-0.182365186094;HIF1A:-0.190508216998;PAX8:-0.193958813961;KLF4:-0.200987915332;HBP1_HMGB_SSRP1_UBTF:-0.214890588217;SREBF1,2:-0.225693666435;FOXP3:-0.24388928509;POU5F1:-0.245745013214;HLF:-0.256730649443;TP53:-0.27498321889;ZEB1:-0.315417381523;STAT5{A,B}:-0.316713136703;NKX3-1:-0.341682778814;XCPE1{core}:-0.360970498519;LMO2:-0.379158268343;FOX{F1,F2,J1}:-0.380182329394;SMAD1..7,9:-0.381730709945;ALX1:-0.398284334101;AR:-0.406175622946;NR3C1:-0.420118544873;FOSL2:-0.421931047157;ELF1,2,4:-0.438076042644;NFIX:-0.447338779862;MTF1:-0.465902488245;NANOG{mouse}:-0.49316927708;NKX2-2,8:-0.504809722961;TBX4,5:-0.505520553121;PAX2:-0.508492982973;HMGA1,2:-0.533183431963;FOXQ1:-0.575923400416;SNAI1..3:-0.602200219119;NFIL3:-0.634302545173;IKZF2:-0.672207468766;NR5A1,2:-0.675150841274;NFKB1_REL_RELA:-0.683759788753;EP300:-0.687681572652;FOS_FOS{B,L1}_JUN{B,D}:-0.708165457188;UFEwm:-0.714068295594;HES1:-0.717080776056;NFE2:-0.720843639285;TLX1..3_NFIC{dimer}:-0.727533766935;DMAP1_NCOR{1,2}_SMARC:-0.729535812462;SPIB:-0.750416319112;BACH2:-0.767288535197;GZF1:-0.769869173983;HNF4A_NR2F1,2:-0.782638624189;ZNF148:-0.784954946448;T:-0.785559546372;NFE2L2:-0.795830062798;XBP1:-0.800066468367;RUNX1..3:-0.80202523952;SPI1:-0.853975335608;ATF6:-0.856371854416;FOX{D1,D2}:-0.901822345069;TFAP2{A,C}:-0.919938049036;NFE2L1:-0.951863556822;ETS1,2:-1.01834555481;NKX3-2:-1.03100151098;MAFB:-1.06698887245;TEAD1:-1.09769773781;ZNF238:-1.13670107806;TBP:-1.17607771183;NFATC1..3:-1.18827033177;SP1:-1.21388167455;IKZF1:-1.28676163872;FOXO1,3,4:-1.37618894968;IRF1,2:-1.41814709549;EBF1:-1.45674322666;TFAP4:-1.46254509387;IRF7:-1.47962293385;ESR1:-1.57088342769;TLX2:-1.57438551072;GCM1,2:-1.58017462112;HMX1:-1.60965014857;SPZ1:-1.62134890823;GLI1..3:-1.62206108778;ALX4:-1.68883745755;SRF:-1.82022966594;HSF1,2:-1.96491822015;TFCP2:-1.98502961508;STAT2,4,6:-2.03557153708;RXRA_VDR{dimer}:-2.0744041141
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10508-107D4;search_select_hide=table117:FF:10508-107D4
}}
}}

Latest revision as of 14:27, 3 June 2020

Name:neuroblastoma cell line:CHP-134
Species:Human (Homo sapiens)
Library ID:CNhs11276
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueadrenal gland
dev stageNA
sexunknown
ageNA
cell typeneuroblast
cell lineCHP-134
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004974
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11276 CAGE DRX007960 DRR008832
Accession ID Hg19

Library idBAMCTSS
CNhs11276 DRZ000257 DRZ001642
Accession ID Hg38

Library idBAMCTSS
CNhs11276 DRZ011607 DRZ012992
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload
HumanCAGEScan Download raw sequence, BAM & CTSS

Library id3prime-FASTQ5prime-FASTQBAMCTSS
NCig10062downloaddownloaddownloaddownload
NCig10126downloaddownloaddownloaddownload

RNA-Seq Accession numbers
MethodSample accession id
RNA-Seq  SAMD00004974
Library accession numbers

Library idMethodExp. accession idRun accession id
RDhi10071 RNA-Seq DRX057128 DRR062887
Accession ID Hg19

Library idBAMCTSS
RDhi10071 DRZ007963


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.0523
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0839
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.462
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.0523
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0.141
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0327
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0862
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.187
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.286
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.306
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0523
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.00309
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.0523
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.36
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.215
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0989
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.0523
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0.925
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11276

Jaspar motifP-value
MA0002.24.14918e-6
MA0003.10.198
MA0004.10.395
MA0006.10.0999
MA0007.10.12
MA0009.10.21
MA0014.10.665
MA0017.18.30285e-4
MA0018.20.00817
MA0019.10.184
MA0024.12.26926e-4
MA0025.10.466
MA0027.10.981
MA0028.10.0467
MA0029.10.708
MA0030.10.971
MA0031.10.433
MA0035.20.899
MA0038.11.95869e-4
MA0039.20.0737
MA0040.10.342
MA0041.10.334
MA0042.10.714
MA0043.10.0286
MA0046.10.378
MA0047.20.0195
MA0048.10.933
MA0050.11.24946e-10
MA0051.12.20328e-4
MA0052.10.31
MA0055.10.868
MA0057.10.0765
MA0058.10.365
MA0059.10.3
MA0060.12.54428e-12
MA0061.10.00831
MA0062.20.027
MA0065.20.00423
MA0066.10.0529
MA0067.10.898
MA0068.10.0536
MA0069.10.92
MA0070.10.134
MA0071.10.468
MA0072.10.962
MA0073.10.545
MA0074.10.152
MA0076.17.86667e-4
MA0077.10.183
MA0078.10.57
MA0079.20.521
MA0080.23.43318e-11
MA0081.10.134
MA0083.10.0015
MA0084.10.23
MA0087.10.251
MA0088.10.516
MA0090.10.0131
MA0091.10.133
MA0092.10.268
MA0093.10.295
MA0099.21.38576e-15
MA0100.10.261
MA0101.10.0189
MA0102.20.341
MA0103.10.174
MA0104.20.0938
MA0105.10.032
MA0106.10.315
MA0107.10.00521
MA0108.20.00205
MA0111.10.906
MA0112.21.95401e-4
MA0113.10.0505
MA0114.10.0158
MA0115.10.831
MA0116.10.017
MA0117.10.72
MA0119.10.0983
MA0122.10.304
MA0124.10.695
MA0125.10.242
MA0131.10.341
MA0135.10.541
MA0136.11.37956e-7
MA0137.20.207
MA0138.20.912
MA0139.10.406
MA0140.10.784
MA0141.10.0432
MA0142.10.59
MA0143.10.475
MA0144.10.00818
MA0145.10.0803
MA0146.10.0584
MA0147.10.105
MA0148.10.0348
MA0149.10.0689
MA0150.14.23781e-4
MA0152.10.778
MA0153.10.216
MA0154.10.0315
MA0155.10.366
MA0156.10.00673
MA0157.10.109
MA0159.10.00816
MA0160.10.151
MA0162.10.201
MA0163.10.00929
MA0164.10.944
MA0258.10.00851
MA0259.10.159



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11276

Novel motifP-value
10.302
100.216
1000.929
1010.991
1020.599
1030.0844
1040.39
1050.661
1060.00314
1070.00565
1080.66
1090.0191
110.12
1100.301
1110.723
1120.0655
1130.78
1140.0327
1150.222
1160.342
1170.241
1180.39
1190.318
120.468
1200.0551
1210.906
1220.604
1230.0548
1240.24
1250.974
1260.117
1270.352
1280.0336
1290.261
130.0898
1300.833
1310.399
1320.727
1330.897
1340.619
1350.275
1360.227
1370.289
1380.771
1390.391
140.605
1400.245
1410.467
1420.841
1430.165
1440.561
1450.121
1460.733
1470.331
1480.0339
1490.0695
150.211
1500.233
1510.429
1520.0554
1530.777
1540.952
1550.736
1560.818
1570.236
1580.419
1590.0934
160.0996
1600.12
1610.71
1620.741
1630.16
1640.0731
1650.289
1660.43
1670.741
1680.0281
1690.0147
170.141
180.552
190.0798
20.246
200.962
210.533
220.0888
230.00223
240.162
250.662
260.06
270.265
280.902
290.148
30.141
300.311
310.485
320.00605
330.198
340.551
350.944
360.653
370.126
380.231
390.071
40.364
400.234
410.292
420.73
430.142
440.0662
450.376
460.209
470.525
480.313
490.405
50.161
500.45
510.456
520.0976
530.839
540.31
550.127
560.484
570.834
580.212
590.0309
60.927
600.0105
610.336
620.0945
630.153
640.836
650.13
660.171
670.63
680.75
690.567
70.226
700.0153
710.0734
720.124
730.0288
740.709
750.312
760.963
770.0391
780.125
790.0889
80.153
800.142
810.385
820.0989
830.155
840.435
850.0341
860.567
870.185
880.705
890.0258
90.183
900.701
910.34
920.082
930.873
940.29
950.0952
960.418
970.737
980.339
990.241



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11276


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000333 (migratory neural crest cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000219 (motile cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
171 (neuroectodermal tumor)
3095 (germ cell and embryonal cancer)
2994 (germ cell cancer)
169 (neuroendocrine tumor)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000013 (sympathetic nervous system)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0002410 (autonomic nervous system)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0000010 (peripheral nervous system)
0001016 (nervous system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100932 (neuroblastoma cell line sample)
0102989 (CHP-134 cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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