FF:10464-106H5: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00004757 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |HumanCAGEScanFiles=NCig10061;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/acute%2520lymphoblastic%2520leukemia%2520%2528T-ALL%2529%2520cell%2520line%253aJurkat.NCig10061.10464-106H5.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/acute%2520lymphoblastic%2520leukemia%2520%28T-ALL%29%2520cell%2520line%253aJurkat.NCig10061.10464-106H5.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/acute%2520lymphoblastic%2520leukemia%2520%28T-ALL%29%2520cell%2520line%253aJurkat.NCig10061.10464-106H5.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/acute%2520lymphoblastic%2520leukemia%2520%28T-ALL%29%2520cell%2520line%253aJurkat.NCig10061.10464-106H5.hg19.GCTATA.pairs.bed.gz | ||
|accession_numbers=CAGE;DRX007800;DRR008672;DRZ000097;DRZ001482;DRZ011447;DRZ012832 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000084 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0102144,FF:0102504,FF:0101035,FF:0100741,FF:0100773,FF:0100739,FF:0100661 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0101035 | |fonse_cell_line=FF:0101035 | ||
|fonse_cell_line_closure=FF:0101035 | |fonse_cell_line_closure=FF:0101035 | ||
Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520lymphoblastic%2520leukemia%2520%2528T-ALL%2529%2520cell%2520line%253aJurkat.CNhs11253.10464-106H5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520lymphoblastic%2520leukemia%2520%2528T-ALL%2529%2520cell%2520line%253aJurkat.CNhs11253.10464-106H5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520lymphoblastic%2520leukemia%2520%2528T-ALL%2529%2520cell%2520line%253aJurkat.CNhs11253.10464-106H5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520lymphoblastic%2520leukemia%2520%2528T-ALL%2529%2520cell%2520line%253aJurkat.CNhs11253.10464-106H5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520lymphoblastic%2520leukemia%2520%2528T-ALL%2529%2520cell%2520line%253aJurkat.CNhs11253.10464-106H5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10464-106H5 | |id=FF:10464-106H5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0100661 | ||
|is_obsolete= | |||
|library_id=CNhs11253 | |||
|library_id_phase_based=2:CNhs11253 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10464 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10464 | |||
|name=acute lymphoblastic leukemia (T-ALL) cell line:Jurkat | |name=acute lymphoblastic leukemia (T-ALL) cell line:Jurkat | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 61: | ||
|profile_cagescan=NCig10061,,, | |profile_cagescan=NCig10061,,, | ||
|profile_hcage=CNhs11253,LSID757,release008,COMPLETED | |profile_hcage=CNhs11253,LSID757,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=106 | |rna_box=106 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 79: | ||
|rna_weight_ug=37.992 | |rna_weight_ug=37.992 | ||
|sample_age=14 | |sample_age=14 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB0806 | |sample_cell_catalog=RCB0806 | ||
|sample_cell_line=Jurkat | |sample_cell_line=Jurkat | ||
Line 69: | Line 92: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.5435955401589e-291!GO:0043227;membrane-bound organelle;1.64177443795815e-250!GO:0043231;intracellular membrane-bound organelle;4.4356608863257e-250!GO:0043226;organelle;2.68937661471388e-243!GO:0043229;intracellular organelle;1.08419083651022e-242!GO:0044422;organelle part;4.92363389632651e-185!GO:0044446;intracellular organelle part;4.8283274599241e-183!GO:0005737;cytoplasm;2.28823900889525e-169!GO:0032991;macromolecular complex;1.15585436326872e-142!GO:0005634;nucleus;6.0620310877591e-133!GO:0044428;nuclear part;1.39178799123012e-115!GO:0044444;cytoplasmic part;1.39178799123012e-115!GO:0030529;ribonucleoprotein complex;2.0683920265159e-114!GO:0044237;cellular metabolic process;2.15552218064909e-114!GO:0044238;primary metabolic process;9.74291204891285e-110!GO:0043170;macromolecule metabolic process;3.04134704801108e-107!GO:0043233;organelle lumen;1.74910625931769e-100!GO:0031974;membrane-enclosed lumen;1.74910625931769e-100!GO:0003723;RNA binding;4.79095075723892e-99!GO:0005739;mitochondrion;1.32238117576115e-77!GO:0006396;RNA processing;8.06942689214199e-77!GO:0043234;protein complex;1.96491222785394e-73!GO:0043283;biopolymer metabolic process;1.58960925303001e-71!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.16489650928198e-69!GO:0031981;nuclear lumen;8.10549615332467e-69!GO:0010467;gene expression;7.53871924358691e-63!GO:0006412;translation;1.68373801645433e-62!GO:0005515;protein binding;6.76136132704459e-62!GO:0005840;ribosome;7.02214267688789e-61!GO:0006259;DNA metabolic process;9.95490779534092e-59!GO:0016071;mRNA metabolic process;1.59448324407913e-56!GO:0044429;mitochondrial part;3.87403907078465e-54!GO:0003735;structural constituent of ribosome;1.42278784278576e-53!GO:0008380;RNA splicing;2.3577125879165e-52!GO:0006397;mRNA processing;2.49343028963497e-50!GO:0031090;organelle membrane;2.79873847808809e-49!GO:0031967;organelle envelope;5.02252629173894e-49!GO:0031975;envelope;7.71653488625265e-49!GO:0019538;protein metabolic process;3.2443609331717e-48!GO:0003676;nucleic acid binding;5.73054224923655e-48!GO:0016043;cellular component organization and biogenesis;2.8173997526107e-46!GO:0044249;cellular biosynthetic process;6.08923995620581e-46!GO:0033279;ribosomal subunit;1.24119455055202e-45!GO:0009059;macromolecule biosynthetic process;2.70809294063409e-45!GO:0006996;organelle organization and biogenesis;3.59416251231756e-45!GO:0009058;biosynthetic process;8.09675499349184e-45!GO:0005654;nucleoplasm;1.15986206549584e-44!GO:0044267;cellular protein metabolic process;1.15986206549584e-44!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.21106899618305e-44!GO:0043228;non-membrane-bound organelle;7.09174135395749e-44!GO:0043232;intracellular non-membrane-bound organelle;7.09174135395749e-44!GO:0044260;cellular macromolecule metabolic process;9.07414664659593e-44!GO:0033036;macromolecule localization;1.78891914914158e-42!GO:0015031;protein transport;2.89864892919368e-41!GO:0007049;cell cycle;6.34769100421016e-40!GO:0005681;spliceosome;2.52450744729832e-38!GO:0065003;macromolecular complex assembly;2.7407402343604e-38!GO:0008104;protein localization;2.30645291973431e-37!GO:0045184;establishment of protein localization;2.67088423887966e-37!GO:0000166;nucleotide binding;4.71112977906849e-37!GO:0005694;chromosome;3.03553928652028e-35!GO:0044451;nucleoplasm part;3.58177743073153e-35!GO:0006974;response to DNA damage stimulus;9.45838824561431e-35!GO:0005829;cytosol;1.55546899479608e-34!GO:0046907;intracellular transport;1.6879390686078e-33!GO:0022607;cellular component assembly;2.45646213658136e-33!GO:0005740;mitochondrial envelope;8.177514991469e-33!GO:0019866;organelle inner membrane;1.3889096011807e-32!GO:0006281;DNA repair;2.5314212285015e-32!GO:0016070;RNA metabolic process;3.92026262130288e-32!GO:0022402;cell cycle process;1.59855376391109e-31!GO:0000278;mitotic cell cycle;3.89968728066258e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.59432595314602e-31!GO:0044427;chromosomal part;9.73991317119769e-31!GO:0031966;mitochondrial membrane;1.14915886615585e-30!GO:0005743;mitochondrial inner membrane;2.57668738735303e-30!GO:0006886;intracellular protein transport;2.17528305855378e-28!GO:0000087;M phase of mitotic cell cycle;1.1486769696498e-27!GO:0051276;chromosome organization and biogenesis;1.38422527680964e-27!GO:0051301;cell division;2.62194454670178e-27!GO:0016462;pyrophosphatase activity;3.61061612131294e-27!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.97893241296493e-27!GO:0007067;mitosis;4.88117091581273e-27!GO:0016817;hydrolase activity, acting on acid anhydrides;6.97723871917082e-27!GO:0017111;nucleoside-triphosphatase activity;7.31512917082178e-27!GO:0022403;cell cycle phase;7.95564465912724e-27!GO:0032553;ribonucleotide binding;2.66748447334532e-26!GO:0032555;purine ribonucleotide binding;2.66748447334532e-26!GO:0044445;cytosolic part;6.52204852671652e-26!GO:0005730;nucleolus;1.65854264931137e-25!GO:0017076;purine nucleotide binding;1.90055568837443e-25!GO:0031980;mitochondrial lumen;1.93790785371595e-25!GO:0005759;mitochondrial matrix;1.93790785371595e-25!GO:0000279;M phase;1.13529940188704e-24!GO:0051649;establishment of cellular localization;2.99552294334872e-24!GO:0006119;oxidative phosphorylation;3.30558139388095e-24!GO:0015935;small ribosomal subunit;4.25239705363745e-24!GO:0051641;cellular localization;8.30046280839831e-24!GO:0022618;protein-RNA complex assembly;2.22102755102984e-23!GO:0044455;mitochondrial membrane part;2.85644442547911e-23!GO:0005524;ATP binding;4.7322407862863e-23!GO:0009719;response to endogenous stimulus;7.09526619837528e-23!GO:0015934;large ribosomal subunit;1.05148688473222e-22!GO:0032559;adenyl ribonucleotide binding;2.18227523889827e-22!GO:0006260;DNA replication;3.73116393655356e-22!GO:0042254;ribosome biogenesis and assembly;2.05867195583143e-21!GO:0030554;adenyl nucleotide binding;2.38089594581302e-21!GO:0042623;ATPase activity, coupled;3.9259278966567e-21!GO:0016874;ligase activity;4.1516492914678e-21!GO:0006512;ubiquitin cycle;4.4803891163225e-21!GO:0016887;ATPase activity;5.01653076437428e-21!GO:0006457;protein folding;1.31784454538657e-20!GO:0006325;establishment and/or maintenance of chromatin architecture;1.83970699013538e-20!GO:0044265;cellular macromolecule catabolic process;5.58787319412379e-20!GO:0012505;endomembrane system;7.43036468440104e-20!GO:0006323;DNA packaging;9.48253381195104e-20!GO:0000502;proteasome complex (sensu Eukaryota);1.49932246042037e-19!GO:0005761;mitochondrial ribosome;4.5084328423015e-19!GO:0000313;organellar ribosome;4.5084328423015e-19!GO:0008135;translation factor activity, nucleic acid binding;5.61055005178995e-19!GO:0005746;mitochondrial respiratory chain;1.33470812621905e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;1.58367438378989e-18!GO:0000398;nuclear mRNA splicing, via spliceosome;1.89518827609513e-18!GO:0000375;RNA splicing, via transesterification reactions;1.89518827609513e-18!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.89518827609513e-18!GO:0019941;modification-dependent protein catabolic process;1.9539199227858e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.9539199227858e-18!GO:0006511;ubiquitin-dependent protein catabolic process;4.07499255493023e-18!GO:0044257;cellular protein catabolic process;4.86233450652346e-18!GO:0016604;nuclear body;1.12823982056768e-17!GO:0044453;nuclear membrane part;1.2080738144466e-17!GO:0043285;biopolymer catabolic process;1.27159711938338e-17!GO:0031965;nuclear membrane;1.62876873955998e-17!GO:0004386;helicase activity;3.01443340956916e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.34408243117052e-17!GO:0005635;nuclear envelope;7.01111229085326e-17!GO:0050136;NADH dehydrogenase (quinone) activity;1.22893432958981e-16!GO:0003954;NADH dehydrogenase activity;1.22893432958981e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.22893432958981e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.40967924342868e-16!GO:0009057;macromolecule catabolic process;5.7827946732427e-16!GO:0005643;nuclear pore;5.7827946732427e-16!GO:0006399;tRNA metabolic process;7.75249068910443e-16!GO:0044248;cellular catabolic process;1.25280925258886e-15!GO:0050657;nucleic acid transport;1.97880241069892e-15!GO:0051236;establishment of RNA localization;1.97880241069892e-15!GO:0050658;RNA transport;1.97880241069892e-15!GO:0006403;RNA localization;1.97880241069892e-15!GO:0008026;ATP-dependent helicase activity;2.80040276467714e-15!GO:0003743;translation initiation factor activity;3.9695675790121e-15!GO:0006364;rRNA processing;4.14017696079101e-15!GO:0042775;organelle ATP synthesis coupled electron transport;4.64649529469875e-15!GO:0042773;ATP synthesis coupled electron transport;4.64649529469875e-15!GO:0000785;chromatin;5.45578609537786e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.22399116660234e-15!GO:0043412;biopolymer modification;7.04397100753822e-15!GO:0016072;rRNA metabolic process;7.59323024530174e-15!GO:0030964;NADH dehydrogenase complex (quinone);1.15246861804205e-14!GO:0045271;respiratory chain complex I;1.15246861804205e-14!GO:0005747;mitochondrial respiratory chain complex I;1.15246861804205e-14!GO:0006413;translational initiation;1.41094485112393e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.19363643830197e-14!GO:0051726;regulation of cell cycle;3.29110579439561e-14!GO:0006605;protein targeting;4.42457645981623e-14!GO:0000074;regulation of progression through cell cycle;4.54184125899905e-14!GO:0016568;chromatin modification;4.86577960795818e-14!GO:0006333;chromatin assembly or disassembly;7.54917039801825e-14!GO:0016607;nuclear speck;8.69307249791273e-14!GO:0065002;intracellular protein transport across a membrane;9.14388258374302e-14!GO:0051082;unfolded protein binding;1.23054335120445e-13!GO:0030163;protein catabolic process;1.48355341392383e-13!GO:0051186;cofactor metabolic process;1.82893140870348e-13!GO:0000775;chromosome, pericentric region;2.08149242234761e-13!GO:0048770;pigment granule;2.18348176686056e-13!GO:0042470;melanosome;2.18348176686056e-13!GO:0065004;protein-DNA complex assembly;2.81490991634323e-13!GO:0046930;pore complex;3.07890249284215e-13!GO:0051028;mRNA transport;3.69238725430594e-13!GO:0008134;transcription factor binding;4.03095485898953e-13!GO:0006913;nucleocytoplasmic transport;7.2940580210952e-13!GO:0044432;endoplasmic reticulum part;7.92577484667471e-13!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.4466313923958e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.58487604764688e-12!GO:0051169;nuclear transport;1.72952642545271e-12!GO:0006464;protein modification process;3.32570723301125e-12!GO:0006446;regulation of translational initiation;4.30311328027887e-12!GO:0016779;nucleotidyltransferase activity;4.86956115141113e-12!GO:0009259;ribonucleotide metabolic process;5.40807181158746e-12!GO:0043687;post-translational protein modification;1.31690034549248e-11!GO:0006163;purine nucleotide metabolic process;1.48333675516574e-11!GO:0006732;coenzyme metabolic process;1.49276631861918e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.51826630098989e-11!GO:0006164;purine nucleotide biosynthetic process;2.82326107297108e-11!GO:0009260;ribonucleotide biosynthetic process;4.31762656167198e-11!GO:0008565;protein transporter activity;4.85741390489045e-11!GO:0006261;DNA-dependent DNA replication;5.15386178432705e-11!GO:0048193;Golgi vesicle transport;5.27332749382531e-11!GO:0043566;structure-specific DNA binding;6.17133877334238e-11!GO:0030532;small nuclear ribonucleoprotein complex;6.17133877334238e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.18656559292586e-11!GO:0005783;endoplasmic reticulum;1.00747342548423e-10!GO:0003697;single-stranded DNA binding;1.10110084524149e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.14266021587015e-10!GO:0005789;endoplasmic reticulum membrane;1.45478829594154e-10!GO:0005819;spindle;1.84142441169256e-10!GO:0009150;purine ribonucleotide metabolic process;2.08696166932723e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.1226042251056e-10!GO:0004812;aminoacyl-tRNA ligase activity;3.1226042251056e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.1226042251056e-10!GO:0016740;transferase activity;3.1501378125531e-10!GO:0009152;purine ribonucleotide biosynthetic process;4.01985625721305e-10!GO:0043038;amino acid activation;6.83725333701679e-10!GO:0006418;tRNA aminoacylation for protein translation;6.83725333701679e-10!GO:0043039;tRNA aminoacylation;6.83725333701679e-10!GO:0019829;cation-transporting ATPase activity;7.57563567192003e-10!GO:0015630;microtubule cytoskeleton;7.73845587951186e-10!GO:0008639;small protein conjugating enzyme activity;1.15149884027754e-09!GO:0009055;electron carrier activity;1.47209271863528e-09!GO:0017038;protein import;2.12426511031214e-09!GO:0003899;DNA-directed RNA polymerase activity;2.19584130243351e-09!GO:0008094;DNA-dependent ATPase activity;2.34525398151802e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.36770424802579e-09!GO:0005839;proteasome core complex (sensu Eukaryota);2.38050149124583e-09!GO:0004842;ubiquitin-protein ligase activity;2.56709729990245e-09!GO:0000075;cell cycle checkpoint;3.39787537490323e-09!GO:0012501;programmed cell death;3.61816863772569e-09!GO:0006915;apoptosis;3.76302591459555e-09!GO:0005657;replication fork;3.93435876365401e-09!GO:0006334;nucleosome assembly;3.95561026194546e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.5314834563939e-09!GO:0031497;chromatin assembly;6.61974945131388e-09!GO:0005667;transcription factor complex;6.83743146327842e-09!GO:0005813;centrosome;7.03677505967353e-09!GO:0016192;vesicle-mediated transport;8.39396949758828e-09!GO:0006461;protein complex assembly;9.27763238555935e-09!GO:0006366;transcription from RNA polymerase II promoter;9.96513644187406e-09!GO:0019787;small conjugating protein ligase activity;1.13750823686043e-08!GO:0005815;microtubule organizing center;1.21442420099152e-08!GO:0009060;aerobic respiration;1.22952757780495e-08!GO:0004298;threonine endopeptidase activity;1.33758914879992e-08!GO:0015986;ATP synthesis coupled proton transport;1.58578356639164e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.58578356639164e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.72351472066005e-08!GO:0051188;cofactor biosynthetic process;1.74132642003819e-08!GO:0000245;spliceosome assembly;2.43842405852641e-08!GO:0005794;Golgi apparatus;2.49541824750701e-08!GO:0006302;double-strand break repair;3.05157068511529e-08!GO:0006310;DNA recombination;3.38205379667112e-08!GO:0007051;spindle organization and biogenesis;5.00388104937578e-08!GO:0008219;cell death;5.39230349117722e-08!GO:0016265;death;5.39230349117722e-08!GO:0003712;transcription cofactor activity;5.79280247978895e-08!GO:0045333;cellular respiration;6.57973681708627e-08!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.1080324829564e-08!GO:0043623;cellular protein complex assembly;9.73520761271198e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.00293933501177e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.02273929498004e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.02273929498004e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.02273929498004e-07!GO:0009141;nucleoside triphosphate metabolic process;1.05289837497798e-07!GO:0051329;interphase of mitotic cell cycle;1.33737838357257e-07!GO:0051325;interphase;1.37485246294163e-07!GO:0009056;catabolic process;1.39920657091658e-07!GO:0016881;acid-amino acid ligase activity;1.55379835288183e-07!GO:0006099;tricarboxylic acid cycle;1.74555204983599e-07!GO:0046356;acetyl-CoA catabolic process;1.74555204983599e-07!GO:0006754;ATP biosynthetic process;1.79849199645116e-07!GO:0006753;nucleoside phosphate metabolic process;1.79849199645116e-07!GO:0003724;RNA helicase activity;2.0991207150051e-07!GO:0009108;coenzyme biosynthetic process;2.0991207150051e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.20136270364453e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.38282360992051e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.38282360992051e-07!GO:0003682;chromatin binding;2.45289849939947e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.49048572137448e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.49048572137448e-07!GO:0007005;mitochondrion organization and biogenesis;2.49986321247907e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.61067272578907e-07!GO:0046034;ATP metabolic process;2.66636164706872e-07!GO:0006084;acetyl-CoA metabolic process;2.71936935970759e-07!GO:0051168;nuclear export;2.98473360128601e-07!GO:0044452;nucleolar part;3.71303574164066e-07!GO:0032446;protein modification by small protein conjugation;3.73691550333847e-07!GO:0009117;nucleotide metabolic process;3.73691550333847e-07!GO:0007059;chromosome segregation;4.13274770654447e-07!GO:0008033;tRNA processing;4.43575983974887e-07!GO:0050794;regulation of cellular process;4.54046778871228e-07!GO:0045259;proton-transporting ATP synthase complex;5.44265577901748e-07!GO:0016787;hydrolase activity;6.01426570651135e-07!GO:0051246;regulation of protein metabolic process;8.02632351996142e-07!GO:0005762;mitochondrial large ribosomal subunit;9.58219008059757e-07!GO:0000315;organellar large ribosomal subunit;9.58219008059757e-07!GO:0000151;ubiquitin ligase complex;9.58219008059757e-07!GO:0016741;transferase activity, transferring one-carbon groups;1.06024616126763e-06!GO:0016567;protein ubiquitination;1.09152550378471e-06!GO:0006793;phosphorus metabolic process;1.09152550378471e-06!GO:0006796;phosphate metabolic process;1.09152550378471e-06!GO:0008168;methyltransferase activity;1.12133737082214e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.29165098037841e-06!GO:0016310;phosphorylation;1.63348326561774e-06!GO:0005793;ER-Golgi intermediate compartment;1.76955199796831e-06!GO:0006752;group transfer coenzyme metabolic process;1.83258660482686e-06!GO:0019222;regulation of metabolic process;2.38736384484471e-06!GO:0007088;regulation of mitosis;2.38736384484471e-06!GO:0000776;kinetochore;2.48200200722781e-06!GO:0009109;coenzyme catabolic process;2.60700958347857e-06!GO:0006613;cotranslational protein targeting to membrane;2.62203167788709e-06!GO:0003678;DNA helicase activity;2.69165869032044e-06!GO:0000314;organellar small ribosomal subunit;2.91798802207743e-06!GO:0005763;mitochondrial small ribosomal subunit;2.91798802207743e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.20840716446687e-06!GO:0005768;endosome;5.45756730859746e-06!GO:0048475;coated membrane;5.61898113333722e-06!GO:0030117;membrane coat;5.61898113333722e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.63214323136297e-06!GO:0015399;primary active transmembrane transporter activity;6.63214323136297e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.12682222786941e-06!GO:0030120;vesicle coat;7.53964886001641e-06!GO:0030662;coated vesicle membrane;7.53964886001641e-06!GO:0005525;GTP binding;7.71665322932784e-06!GO:0006383;transcription from RNA polymerase III promoter;7.84288055894322e-06!GO:0003684;damaged DNA binding;9.29619240401052e-06!GO:0016363;nuclear matrix;9.31209170075627e-06!GO:0051187;cofactor catabolic process;9.82318607047345e-06!GO:0006606;protein import into nucleus;1.23119110570541e-05!GO:0003690;double-stranded DNA binding;1.29350973266326e-05!GO:0051170;nuclear import;1.33936256160414e-05!GO:0051052;regulation of DNA metabolic process;1.41022559525431e-05!GO:0004518;nuclease activity;1.4490126044067e-05!GO:0008186;RNA-dependent ATPase activity;1.66437167306046e-05!GO:0000228;nuclear chromosome;1.71405271669916e-05!GO:0042981;regulation of apoptosis;1.77015959523565e-05!GO:0006405;RNA export from nucleus;1.87561503005106e-05!GO:0051427;hormone receptor binding;2.38519429479397e-05!GO:0043067;regulation of programmed cell death;2.39632197081337e-05!GO:0043681;protein import into mitochondrion;2.51077615959367e-05!GO:0003729;mRNA binding;2.58097365000976e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;2.59324330509875e-05!GO:0015631;tubulin binding;3.2166876959232e-05!GO:0003713;transcription coactivator activity;3.31636873553736e-05!GO:0006352;transcription initiation;4.19022605611409e-05!GO:0030880;RNA polymerase complex;5.24633091492965e-05!GO:0035257;nuclear hormone receptor binding;5.31137831527448e-05!GO:0043021;ribonucleoprotein binding;5.40297731025081e-05!GO:0007093;mitotic cell cycle checkpoint;5.40297731025081e-05!GO:0004004;ATP-dependent RNA helicase activity;5.47930326299707e-05!GO:0016251;general RNA polymerase II transcription factor activity;6.12699588586611e-05!GO:0032508;DNA duplex unwinding;6.14715199648258e-05!GO:0032392;DNA geometric change;6.14715199648258e-05!GO:0006401;RNA catabolic process;6.23031012838112e-05!GO:0016563;transcription activator activity;6.31873247165852e-05!GO:0009165;nucleotide biosynthetic process;7.67582502142661e-05!GO:0016853;isomerase activity;8.22421386904089e-05!GO:0032561;guanyl ribonucleotide binding;8.43585744686684e-05!GO:0019001;guanyl nucleotide binding;8.43585744686684e-05!GO:0004527;exonuclease activity;8.63670955966133e-05!GO:0006612;protein targeting to membrane;0.000108758047700968!GO:0031323;regulation of cellular metabolic process;0.000115429950520004!GO:0003924;GTPase activity;0.000115429950520004!GO:0019899;enzyme binding;0.000118428362449876!GO:0031570;DNA integrity checkpoint;0.000120858782274025!GO:0005798;Golgi-associated vesicle;0.000121515063278032!GO:0006350;transcription;0.00012885856153779!GO:0006414;translational elongation;0.000129869450110912!GO:0006402;mRNA catabolic process;0.000131881915718176!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000136451406364786!GO:0000428;DNA-directed RNA polymerase complex;0.000136451406364786!GO:0048523;negative regulation of cellular process;0.000141832910637306!GO:0045454;cell redox homeostasis;0.00014336271347182!GO:0051539;4 iron, 4 sulfur cluster binding;0.000145323613242671!GO:0043492;ATPase activity, coupled to movement of substances;0.000159003528716884!GO:0051540;metal cluster binding;0.000171546483896644!GO:0051536;iron-sulfur cluster binding;0.000171546483896644!GO:0006268;DNA unwinding during replication;0.000175075345507251!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000188170147213866!GO:0005684;U2-dependent spliceosome;0.000193232373746886!GO:0044431;Golgi apparatus part;0.000207284540402619!GO:0045786;negative regulation of progression through cell cycle;0.000211758803700224!GO:0000786;nucleosome;0.000218334216656399!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000225770252037391!GO:0043596;nuclear replication fork;0.00022621069979294!GO:0000049;tRNA binding;0.000229500709985316!GO:0031072;heat shock protein binding;0.000254727441964177!GO:0007052;mitotic spindle organization and biogenesis;0.000268102009859287!GO:0006338;chromatin remodeling;0.000280921464245882!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000298998955288437!GO:0005876;spindle microtubule;0.000329128330409105!GO:0016859;cis-trans isomerase activity;0.000340693952512791!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000343113692466632!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000351146133973254!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000352367020229176!GO:0000819;sister chromatid segregation;0.000357762376020226!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00036973469872338!GO:0006916;anti-apoptosis;0.000371940729150632!GO:0050789;regulation of biological process;0.000372821793111896!GO:0000922;spindle pole;0.000381302501651321!GO:0031324;negative regulation of cellular metabolic process;0.000387994672088103!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000411308226512348!GO:0000070;mitotic sister chromatid segregation;0.000420783217785797!GO:0008654;phospholipid biosynthetic process;0.000426624619627938!GO:0044440;endosomal part;0.000433432312197773!GO:0010008;endosome membrane;0.000433432312197773!GO:0003677;DNA binding;0.000434212270159011!GO:0000059;protein import into nucleus, docking;0.000435401668575703!GO:0009124;nucleoside monophosphate biosynthetic process;0.000439474011872423!GO:0009123;nucleoside monophosphate metabolic process;0.000439474011872423!GO:0030384;phosphoinositide metabolic process;0.000443502481054375!GO:0000725;recombinational repair;0.000461106051231519!GO:0000724;double-strand break repair via homologous recombination;0.000461106051231519!GO:0000910;cytokinesis;0.000469354032907008!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000469703830860869!GO:0006839;mitochondrial transport;0.000472251856870665!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000500858947654052!GO:0000077;DNA damage checkpoint;0.000510577143289276!GO:0005885;Arp2/3 protein complex;0.000512555712993796!GO:0044450;microtubule organizing center part;0.000520395554827504!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000554641566875662!GO:0048500;signal recognition particle;0.000562435220531171!GO:0009112;nucleobase metabolic process;0.000563449676708025!GO:0006626;protein targeting to mitochondrion;0.000579358034279623!GO:0006818;hydrogen transport;0.000588435414197991!GO:0006650;glycerophospholipid metabolic process;0.000588435414197991!GO:0015992;proton transport;0.000598036937706099!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000636651852633245!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000692209712024644!GO:0006270;DNA replication initiation;0.000702683570290871!GO:0004674;protein serine/threonine kinase activity;0.000718438385530563!GO:0004003;ATP-dependent DNA helicase activity;0.000746094926433104!GO:0043601;nuclear replisome;0.000757431627218256!GO:0030894;replisome;0.000757431627218256!GO:0008312;7S RNA binding;0.000757431627218256!GO:0009892;negative regulation of metabolic process;0.000777558118515972!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000777606932984922!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000777606932984922!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000777606932984922!GO:0006275;regulation of DNA replication;0.000838348388870985!GO:0003711;transcription elongation regulator activity;0.000889431464703818!GO:0044454;nuclear chromosome part;0.000897226650792609!GO:0046474;glycerophospholipid biosynthetic process;0.000900795014561271!GO:0046489;phosphoinositide biosynthetic process;0.000907043173101331!GO:0065009;regulation of a molecular function;0.000907493449746752!GO:0048519;negative regulation of biological process;0.000939197499253085!GO:0007017;microtubule-based process;0.00103477512404445!GO:0005770;late endosome;0.00106443669284832!GO:0007006;mitochondrial membrane organization and biogenesis;0.00107224610260727!GO:0032259;methylation;0.00111107840656728!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00112580252208007!GO:0000139;Golgi membrane;0.00117283547370273!GO:0016272;prefoldin complex;0.00119814045758632!GO:0009451;RNA modification;0.00121783852424271!GO:0010468;regulation of gene expression;0.00123818417564966!GO:0009161;ribonucleoside monophosphate metabolic process;0.00123818417564966!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00123818417564966!GO:0051920;peroxiredoxin activity;0.00126500238838807!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00138545646987748!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00138545646987748!GO:0031124;mRNA 3'-end processing;0.00139562117787212!GO:0051087;chaperone binding;0.00139657110837385!GO:0006144;purine base metabolic process;0.00139698539974029!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00142529381963997!GO:0045047;protein targeting to ER;0.00142529381963997!GO:0004576;oligosaccharyl transferase activity;0.00148994122848118!GO:0047485;protein N-terminus binding;0.00149424595226444!GO:0019843;rRNA binding;0.00149966393703778!GO:0032200;telomere organization and biogenesis;0.00151302691702822!GO:0000723;telomere maintenance;0.00151302691702822!GO:0043069;negative regulation of programmed cell death;0.00151332672147935!GO:0000287;magnesium ion binding;0.00157160063417077!GO:0006417;regulation of translation;0.00158778179466784!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00161849627992462!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0016499288654953!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00168417977054943!GO:0005669;transcription factor TFIID complex;0.00171535082215413!GO:0048471;perinuclear region of cytoplasm;0.00171744336580177!GO:0008250;oligosaccharyl transferase complex;0.00174983717747227!GO:0006611;protein export from nucleus;0.0017875253693203!GO:0042393;histone binding;0.00181223052153882!GO:0043066;negative regulation of apoptosis;0.0018698341008107!GO:0005874;microtubule;0.00188046171030992!GO:0022890;inorganic cation transmembrane transporter activity;0.00194188896271893!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00196134239900939!GO:0006289;nucleotide-excision repair;0.00198498133842458!GO:0008408;3'-5' exonuclease activity;0.0019889812081638!GO:0000792;heterochromatin;0.00200752709680576!GO:0000082;G1/S transition of mitotic cell cycle;0.00215294270567859!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00216199718160863!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00216698144255744!GO:0000178;exosome (RNase complex);0.00216698144255744!GO:0006091;generation of precursor metabolites and energy;0.00219299518702548!GO:0003887;DNA-directed DNA polymerase activity;0.00238548267128655!GO:0005048;signal sequence binding;0.00238548267128655!GO:0016564;transcription repressor activity;0.00245472274121982!GO:0006406;mRNA export from nucleus;0.00249430368666035!GO:0008017;microtubule binding;0.00250848315064684!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00253074970651253!GO:0006284;base-excision repair;0.00265284022394683!GO:0032774;RNA biosynthetic process;0.00265559488881555!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00267303694520205!GO:0005637;nuclear inner membrane;0.00285773835659355!GO:0000793;condensed chromosome;0.00289056890253348!GO:0000339;RNA cap binding;0.00290068920315603!GO:0005758;mitochondrial intermembrane space;0.00291416616713759!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00297755412596555!GO:0008180;signalosome;0.00299739873268165!GO:0030521;androgen receptor signaling pathway;0.00308023973928274!GO:0008276;protein methyltransferase activity;0.00308554444130842!GO:0051252;regulation of RNA metabolic process;0.00315767226143378!GO:0031123;RNA 3'-end processing;0.00320261215108134!GO:0008022;protein C-terminus binding;0.00322617993067614!GO:0005788;endoplasmic reticulum lumen;0.00326632726489374!GO:0043414;biopolymer methylation;0.00345125721459384!GO:0006351;transcription, DNA-dependent;0.00345816765873761!GO:0004532;exoribonuclease activity;0.00354442149018661!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00354442149018661!GO:0016126;sterol biosynthetic process;0.00362656633062693!GO:0033116;ER-Golgi intermediate compartment membrane;0.00366145842127723!GO:0016481;negative regulation of transcription;0.00367164983923288!GO:0008632;apoptotic program;0.00385356065564419!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00385356065564419!GO:0015002;heme-copper terminal oxidase activity;0.00385356065564419!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00385356065564419!GO:0004129;cytochrome-c oxidase activity;0.00385356065564419!GO:0000726;non-recombinational repair;0.00389849616620112!GO:0008287;protein serine/threonine phosphatase complex;0.00393888537393418!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.00411590497868154!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.00411590497868154!GO:0009126;purine nucleoside monophosphate metabolic process;0.00411590497868154!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.00411590497868154!GO:0007010;cytoskeleton organization and biogenesis;0.00438506946379585!GO:0006695;cholesterol biosynthetic process;0.00449969969472242!GO:0006891;intra-Golgi vesicle-mediated transport;0.00455014171983103!GO:0006595;polyamine metabolic process;0.00456502666567955!GO:0009303;rRNA transcription;0.00483441490687312!GO:0030663;COPI coated vesicle membrane;0.00485194691275086!GO:0030126;COPI vesicle coat;0.00485194691275086!GO:0045045;secretory pathway;0.00487125407729093!GO:0005663;DNA replication factor C complex;0.0049237162146982!GO:0006378;mRNA polyadenylation;0.0049475884282822!GO:0018196;peptidyl-asparagine modification;0.00502928583656537!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00502928583656537!GO:0031988;membrane-bound vesicle;0.00523030452605724!GO:0009116;nucleoside metabolic process;0.00524230007082977!GO:0031577;spindle checkpoint;0.00539217813736202!GO:0000152;nuclear ubiquitin ligase complex;0.00548738154967381!GO:0019867;outer membrane;0.00573848184329743!GO:0031970;organelle envelope lumen;0.00579685051239726!GO:0046112;nucleobase biosynthetic process;0.00590331389092467!GO:0003746;translation elongation factor activity;0.00607013315069151!GO:0006400;tRNA modification;0.00614331646645567!GO:0003725;double-stranded RNA binding;0.00618261823766325!GO:0031326;regulation of cellular biosynthetic process;0.00627325838213222!GO:0000781;chromosome, telomeric region;0.00631049490651192!GO:0015980;energy derivation by oxidation of organic compounds;0.00631049490651192!GO:0051053;negative regulation of DNA metabolic process;0.00633576665810417!GO:0031968;organelle outer membrane;0.00664647002916363!GO:0030137;COPI-coated vesicle;0.00684771411878723!GO:0019783;small conjugating protein-specific protease activity;0.00708063067564428!GO:0046966;thyroid hormone receptor binding;0.00713164730747582!GO:0006506;GPI anchor biosynthetic process;0.00717285435565077!GO:0005832;chaperonin-containing T-complex;0.00724549864364955!GO:0051320;S phase;0.00745911190820671!GO:0016491;oxidoreductase activity;0.00750830235481865!GO:0004722;protein serine/threonine phosphatase activity;0.007548007755421!GO:0030658;transport vesicle membrane;0.0075728254912652!GO:0006730;one-carbon compound metabolic process;0.00764173924080596!GO:0030118;clathrin coat;0.00765043219022919!GO:0008139;nuclear localization sequence binding;0.00772614187184954!GO:0046483;heterocycle metabolic process;0.00777443248002742!GO:0006505;GPI anchor metabolic process;0.0078445800249926!GO:0042770;DNA damage response, signal transduction;0.0078445800249926!GO:0006497;protein amino acid lipidation;0.00785126072921438!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00809417503168724!GO:0048487;beta-tubulin binding;0.00832099841469177!GO:0006376;mRNA splice site selection;0.00840271962966145!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00840271962966145!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00852985830816048!GO:0043022;ribosome binding;0.00852985830816048!GO:0006520;amino acid metabolic process;0.00865477443762338!GO:0016584;nucleosome positioning;0.00877880452084618!GO:0004843;ubiquitin-specific protease activity;0.0090336743611408!GO:0035258;steroid hormone receptor binding;0.00941514434556602!GO:0042802;identical protein binding;0.00978141562015299!GO:0043189;H4/H2A histone acetyltransferase complex;0.0104566680369544!GO:0007264;small GTPase mediated signal transduction;0.0105708612533871!GO:0016023;cytoplasmic membrane-bound vesicle;0.0108144317145741!GO:0051287;NAD binding;0.010876681051985!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0110358654017657!GO:0043488;regulation of mRNA stability;0.0117616823202128!GO:0043487;regulation of RNA stability;0.0117616823202128!GO:0005769;early endosome;0.0119039455584377!GO:0016585;chromatin remodeling complex;0.0121656291655337!GO:0043284;biopolymer biosynthetic process;0.0121656291655337!GO:0031982;vesicle;0.0121671220381488!GO:0030176;integral to endoplasmic reticulum membrane;0.0121671220381488!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0124567671884431!GO:0030660;Golgi-associated vesicle membrane;0.0126382400500747!GO:0000119;mediator complex;0.0126406178865365!GO:0035267;NuA4 histone acetyltransferase complex;0.0127109216945784!GO:0051656;establishment of organelle localization;0.0131084763754034!GO:0000118;histone deacetylase complex;0.0134053980550722!GO:0007021;tubulin folding;0.0134053980550722!GO:0004523;ribonuclease H activity;0.0134083796637756!GO:0051297;centrosome organization and biogenesis;0.0134083796637756!GO:0031023;microtubule organizing center organization and biogenesis;0.0134083796637756!GO:0022884;macromolecule transmembrane transporter activity;0.0138591996934713!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0138591996934713!GO:0005741;mitochondrial outer membrane;0.0144236990259571!GO:0003714;transcription corepressor activity;0.0147279448244247!GO:0050790;regulation of catalytic activity;0.0148560549158053!GO:0004221;ubiquitin thiolesterase activity;0.0149960606588704!GO:0042026;protein refolding;0.0151801543378956!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0152243832848969!GO:0050852;T cell receptor signaling pathway;0.015336087195647!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0157678836035572!GO:0051789;response to protein stimulus;0.0157959298569468!GO:0006986;response to unfolded protein;0.0157959298569468!GO:0005732;small nucleolar ribonucleoprotein complex;0.0157959298569468!GO:0050662;coenzyme binding;0.0158197136814648!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0160557283501033!GO:0008538;proteasome activator activity;0.0160832843573932!GO:0008320;protein transmembrane transporter activity;0.0162731955688873!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0167835912553832!GO:0045039;protein import into mitochondrial inner membrane;0.0167835912553832!GO:0030496;midbody;0.0168270462471462!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.016979522044405!GO:0016790;thiolester hydrolase activity;0.0174796561057852!GO:0033170;DNA-protein loading ATPase activity;0.0178631877618547!GO:0003689;DNA clamp loader activity;0.0178631877618547!GO:0022411;cellular component disassembly;0.0180670837600889!GO:0005658;alpha DNA polymerase:primase complex;0.0181207480990566!GO:0000096;sulfur amino acid metabolic process;0.0183050136069196!GO:0004540;ribonuclease activity;0.0183311656631538!GO:0016407;acetyltransferase activity;0.0185235468260859!GO:0016605;PML body;0.018690232714894!GO:0030119;AP-type membrane coat adaptor complex;0.019340708985777!GO:0006266;DNA ligation;0.0200071799834724!GO:0031252;leading edge;0.0201326432346365!GO:0001824;blastocyst development;0.0201326432346365!GO:0000175;3'-5'-exoribonuclease activity;0.0206830373189457!GO:0005869;dynactin complex;0.0207743707706377!GO:0046467;membrane lipid biosynthetic process;0.0207955254150794!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0210955348593689!GO:0015036;disulfide oxidoreductase activity;0.0211146391756264!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0212762686183554!GO:0000123;histone acetyltransferase complex;0.0221902765453097!GO:0043631;RNA polyadenylation;0.0221902765453097!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.022271945347509!GO:0005680;anaphase-promoting complex;0.0224903082990189!GO:0007265;Ras protein signal transduction;0.0227227151746869!GO:0016569;covalent chromatin modification;0.0232307201251273!GO:0016197;endosome transport;0.0233517400418847!GO:0042158;lipoprotein biosynthetic process;0.0233535459378135!GO:0030867;rough endoplasmic reticulum membrane;0.0234996469393077!GO:0006740;NADPH regeneration;0.0241989915558823!GO:0006098;pentose-phosphate shunt;0.0241989915558823!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0243263162508013!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.024713574539447!GO:0007050;cell cycle arrest;0.0247457840733141!GO:0045449;regulation of transcription;0.0251619627017676!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0253668575393036!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0253668575393036!GO:0010257;NADH dehydrogenase complex assembly;0.0253668575393036!GO:0033108;mitochondrial respiratory chain complex assembly;0.0253668575393036!GO:0019752;carboxylic acid metabolic process;0.0253668575393036!GO:0016408;C-acyltransferase activity;0.0254859848994913!GO:0031410;cytoplasmic vesicle;0.0255680162139968!GO:0009081;branched chain family amino acid metabolic process;0.0255803813073416!GO:0051283;negative regulation of sequestering of calcium ion;0.0260019106147915!GO:0051282;regulation of sequestering of calcium ion;0.0260019106147915!GO:0051209;release of sequestered calcium ion into cytosol;0.0260019106147915!GO:0008536;Ran GTPase binding;0.0261646467290287!GO:0022406;membrane docking;0.0264502084030965!GO:0048278;vesicle docking;0.0264502084030965!GO:0032039;integrator complex;0.0265136149209732!GO:0008652;amino acid biosynthetic process;0.0267820167851065!GO:0030131;clathrin adaptor complex;0.026789543465406!GO:0008097;5S rRNA binding;0.0269213557065976!GO:0006487;protein amino acid N-linked glycosylation;0.027110263093718!GO:0017134;fibroblast growth factor binding;0.0271627173245487!GO:0007004;telomere maintenance via telomerase;0.0273129888143814!GO:0042809;vitamin D receptor binding;0.0274294035345079!GO:0000790;nuclear chromatin;0.0274327249888674!GO:0008234;cysteine-type peptidase activity;0.02753978423926!GO:0005689;U12-dependent spliceosome;0.0278276522462079!GO:0008156;negative regulation of DNA replication;0.0279413496136139!GO:0031371;ubiquitin conjugating enzyme complex;0.0279413496136139!GO:0042054;histone methyltransferase activity;0.0279413496136139!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0279413496136139!GO:0040029;regulation of gene expression, epigenetic;0.0280768799987104!GO:0005092;GDP-dissociation inhibitor activity;0.0284453269922645!GO:0006082;organic acid metabolic process;0.0287959053920235!GO:0005784;translocon complex;0.0288528465403084!GO:0030132;clathrin coat of coated pit;0.0295906986852497!GO:0050000;chromosome localization;0.0297083973065039!GO:0051303;establishment of chromosome localization;0.0297083973065039!GO:0006303;double-strand break repair via nonhomologous end joining;0.0300101822766542!GO:0003702;RNA polymerase II transcription factor activity;0.0312796702242611!GO:0030518;steroid hormone receptor signaling pathway;0.0312796702242611!GO:0008154;actin polymerization and/or depolymerization;0.0318174496903636!GO:0007098;centrosome cycle;0.0322960129308345!GO:0009889;regulation of biosynthetic process;0.0328746966643145!GO:0001832;blastocyst growth;0.033203791780221!GO:0016301;kinase activity;0.0335944696174855!GO:0019238;cyclohydrolase activity;0.0336955188318477!GO:0030508;thiol-disulfide exchange intermediate activity;0.0337063628362421!GO:0005666;DNA-directed RNA polymerase III complex;0.0338857662126407!GO:0006519;amino acid and derivative metabolic process;0.0342248106158997!GO:0044438;microbody part;0.0349480316200528!GO:0044439;peroxisomal part;0.0349480316200528!GO:0005652;nuclear lamina;0.0351384018316034!GO:0000097;sulfur amino acid biosynthetic process;0.0352538200797271!GO:0030174;regulation of DNA replication initiation;0.0356080624560678!GO:0009113;purine base biosynthetic process;0.03571417199156!GO:0046519;sphingoid metabolic process;0.0369258142117796!GO:0030041;actin filament polymerization;0.0370789654980411!GO:0006607;NLS-bearing substrate import into nucleus;0.037275741908783!GO:0030036;actin cytoskeleton organization and biogenesis;0.0375485389533465!GO:0051208;sequestering of calcium ion;0.0376571807131018!GO:0060090;molecular adaptor activity;0.0379277522309686!GO:0032040;small subunit processome;0.0381300789982113!GO:0008213;protein amino acid alkylation;0.038142003714472!GO:0006479;protein amino acid methylation;0.038142003714472!GO:0001522;pseudouridine synthesis;0.0383588257714182!GO:0000209;protein polyubiquitination;0.0383588257714182!GO:0006904;vesicle docking during exocytosis;0.0383588257714182!GO:0006672;ceramide metabolic process;0.0391475536696902!GO:0031647;regulation of protein stability;0.0398127588625804!GO:0042769;DNA damage response, detection of DNA damage;0.040374362068695!GO:0030127;COPII vesicle coat;0.0404703961201399!GO:0012507;ER to Golgi transport vesicle membrane;0.0404703961201399!GO:0042608;T cell receptor binding;0.0411174094788518!GO:0007034;vacuolar transport;0.04131631748537!GO:0008537;proteasome activator complex;0.0415266600957331!GO:0016279;protein-lysine N-methyltransferase activity;0.041655174590062!GO:0018024;histone-lysine N-methyltransferase activity;0.041655174590062!GO:0016278;lysine N-methyltransferase activity;0.041655174590062!GO:0030134;ER to Golgi transport vesicle;0.041655174590062!GO:0006278;RNA-dependent DNA replication;0.0420680092213908!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0422389136729065!GO:0006596;polyamine biosynthetic process;0.0428995180921749!GO:0000930;gamma-tubulin complex;0.0433830128417357!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0439165974177435!GO:0051235;maintenance of localization;0.0443100009013853!GO:0050856;regulation of T cell receptor signaling pathway;0.0452205462579708!GO:0030125;clathrin vesicle coat;0.0452205462579708!GO:0030665;clathrin coated vesicle membrane;0.0452205462579708!GO:0046982;protein heterodimerization activity;0.0453150539721303!GO:0007243;protein kinase cascade;0.0455443024348994!GO:0008610;lipid biosynthetic process;0.0459999850657701!GO:0043624;cellular protein complex disassembly;0.0460363584810219!GO:0006007;glucose catabolic process;0.0460363584810219!GO:0004239;methionyl aminopeptidase activity;0.0460363584810219!GO:0043065;positive regulation of apoptosis;0.0460703725036141!GO:0007346;regulation of progression through mitotic cell cycle;0.0461287612923621!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0462113303530154!GO:0045947;negative regulation of translational initiation;0.0463126456821107!GO:0019206;nucleoside kinase activity;0.0464389951996628!GO:0006379;mRNA cleavage;0.0466934538981339!GO:0005686;snRNP U2;0.0471659395771826!GO:0001891;phagocytic cup;0.0483026626053898!GO:0005487;nucleocytoplasmic transporter activity;0.0483980451651059!GO:0031903;microbody membrane;0.0487197357729215!GO:0005778;peroxisomal membrane;0.0487197357729215!GO:0031503;protein complex localization;0.0491780552039751!GO:0030911;TPR domain binding;0.049325521023574!GO:0050178;phenylpyruvate tautomerase activity;0.049573725280177 | |||
|sample_id=10464 | |sample_id=10464 | ||
|sample_note= | |sample_note= | ||
Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=IKZF2:2.11898396204;MYB:2.0127979395;E2F1..5:1.81206916475;BREu{core}:1.70704009492;NRF1:1.69954267669;ZNF143:1.61485285441;RBPJ:1.60921737631;ARID5B:1.5468385114;DMAP1_NCOR{1,2}_SMARC:1.40275398234;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.36386213098;CDX1,2,4:1.34511993676;ELK1,4_GABP{A,B1}:1.24519093655;NFY{A,B,C}:1.24453857443;YY1:1.21998491086;T:1.13990422304;NKX6-1,2:1.05965874827;FOXA2:1.05388973079;FOXM1:1.03532484095;NKX2-1,4:1.03412461588;PAX6:1.00955631855;PBX1:0.970761196183;ELF1,2,4:0.97073590559;GATA6:0.925972574982;TEF:0.886688925709;TFDP1:0.88508759569;PAX8:0.863126013946;BPTF:0.755764099067;PITX1..3:0.732300349914;ZBTB16:0.73107921195;HOX{A5,B5}:0.687297383603;RUNX1..3:0.658462613096;AIRE:0.626240828442;GFI1:0.622512820587;POU3F1..4:0.616818464552;CRX:0.608358753508;FOXP3:0.594399691927;VSX1,2:0.592740314709;LEF1_TCF7_TCF7L1,2:0.568001528235;FOXD3:0.545909289738;NR5A1,2:0.542562243037;KLF4:0.536568686057;FOX{I1,J2}:0.531126203595;POU2F1..3:0.524696491779;NKX3-1:0.475471266743;ONECUT1,2:0.465743460062;SNAI1..3:0.462623012476;CUX2:0.457428805537;NKX2-2,8:0.445405805436;RFX2..5_RFXANK_RFXAP:0.44132514467;HOX{A4,D4}:0.430696900681;HOXA9_MEIS1:0.411791518137;PAX4:0.404891358777;LHX3,4:0.397623817458;NR1H4:0.381377005083;SPI1:0.37245009173;POU6F1:0.336993217634;NANOG:0.319329463534;EVI1:0.317593812008;SPIB:0.299278279068;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.280510666213;ETS1,2:0.238677751877;PPARG:0.222208683767;ZEB1:0.197601757189;POU1F1:0.17169299141;GATA4:0.171182837868;OCT4_SOX2{dimer}:0.168545094104;RORA:0.151476315836;TGIF1:0.139065972903;EN1,2:0.126261000864;PAX3,7:0.121599470351;ATF5_CREB3:0.109975901073;PRRX1,2:0.0942636206044;NKX2-3_NKX2-5:0.0803950702721;GCM1,2:0.063128630542;IRF1,2:0.0525181780781;ZNF148:0.0324866047568;HOX{A6,A7,B6,B7}:0.00608294155609;HES1:-0.00117880380118;LMO2:-0.00243799700244;ZNF384:-0.00401737283444;CREB1:-0.00526314599097;RFX1:-0.00742195434223;SOX5:-0.0145704460478;SOX17:-0.0159685298473;PDX1:-0.0168739027452;AR:-0.0250530706578;FOXP1:-0.0303363292745;FOXQ1:-0.049199642017;CDC5L:-0.0932013685721;ATF4:-0.10101923074;HNF4A_NR2F1,2:-0.113159789834;NANOG{mouse}:-0.113704144674;FOX{F1,F2,J1}:-0.124809020634;RREB1:-0.139165586121;IRF7:-0.144236819591;SOX{8,9,10}:-0.158973551665;UFEwm:-0.163138517275;STAT1,3:-0.175472208206;MYOD1:-0.187958057319;HNF1A:-0.204664412858;bHLH_family:-0.221130599243;ALX1:-0.233517565561;SOX2:-0.235879522057;HSF1,2:-0.247691574832;STAT5{A,B}:-0.255560896582;TOPORS:-0.269212048976;HMGA1,2:-0.273173853403;POU5F1:-0.309964578241;DBP:-0.325581696609;ZFP161:-0.332033719942;PAX5:-0.376883467173;MYBL2:-0.39260035315;NFKB1_REL_RELA:-0.445579236786;NR3C1:-0.448148829497;NFIL3:-0.454596366754;ADNP_IRX_SIX_ZHX:-0.460547590584;NFIX:-0.48651001858;PAX1,9:-0.491786990578;AHR_ARNT_ARNT2:-0.504286176928;RXRA_VDR{dimer}:-0.50621360672;FOXN1:-0.530003146599;FOXO1,3,4:-0.538934446136;MEF2{A,B,C,D}:-0.54219299032;REST:-0.578119850914;ESRRA:-0.585647924599;NFE2L1:-0.585653256185;SREBF1,2:-0.607022126625;PRDM1:-0.60818858134;ZIC1..3:-0.624203292865;TLX2:-0.625077047527;NHLH1,2:-0.628408987461;HAND1,2:-0.63512077346;CEBPA,B_DDIT3:-0.646301646712;HIC1:-0.651992690704;GZF1:-0.668059170078;BACH2:-0.686366127863;MTE{core}:-0.687756778261;PAX2:-0.697972511418;TAL1_TCF{3,4,12}:-0.701778487109;FOS_FOS{B,L1}_JUN{B,D}:-0.701822393897;GFI1B:-0.717734960685;ZNF423:-0.723209179073;FOSL2:-0.726156699798;HLF:-0.743121569838;MED-1{core}:-0.748029897954;NFE2:-0.756572834961;SPZ1:-0.762456476531;NKX3-2:-0.777810036443;NFE2L2:-0.80738225128;SRF:-0.81111612835;ATF6:-0.819734836809;MZF1:-0.841270398094;RXR{A,B,G}:-0.842493439647;GTF2A1,2:-0.863624631578;HIF1A:-0.866272680394;HBP1_HMGB_SSRP1_UBTF:-0.875520867272;EGR1..3:-0.877413452171;TFAP2B:-0.899088261361;MYFfamily:-0.931794237346;IKZF1:-0.97113162294;ZBTB6:-0.989948190507;ZNF238:-0.996371247166;XCPE1{core}:-1.01161124955;JUN:-1.05095461477;TP53:-1.05100143147;STAT2,4,6:-1.06025552493;SMAD1..7,9:-1.08612496327;SP1:-1.09109691118;EBF1:-1.10288910613;ESR1:-1.11971130406;GTF2I:-1.12471596124;MAZ:-1.17084977941;ALX4:-1.1710823719;XBP1:-1.17149016335;TEAD1:-1.19313355527;HMX1:-1.20117413049;EP300:-1.21012400158;PATZ1:-1.22636945933;ATF2:-1.2294193375;FOXL1:-1.25604212868;MTF1:-1.31044219045;FOX{D1,D2}:-1.38740471793;TBX4,5:-1.40795243087;NFATC1..3:-1.41152018679;GLI1..3:-1.41215936924;TBP:-1.42209083279;NR6A1:-1.43052709317;TLX1..3_NFIC{dimer}:-1.58538637372;MAFB:-1.66754606058;TFAP4:-1.89513045814;TFAP2{A,C}:-1.98881346475;TFCP2:-2.44551524326 | |top_motifs=IKZF2:2.11898396204;MYB:2.0127979395;E2F1..5:1.81206916475;BREu{core}:1.70704009492;NRF1:1.69954267669;ZNF143:1.61485285441;RBPJ:1.60921737631;ARID5B:1.5468385114;DMAP1_NCOR{1,2}_SMARC:1.40275398234;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.36386213098;CDX1,2,4:1.34511993676;ELK1,4_GABP{A,B1}:1.24519093655;NFY{A,B,C}:1.24453857443;YY1:1.21998491086;T:1.13990422304;NKX6-1,2:1.05965874827;FOXA2:1.05388973079;FOXM1:1.03532484095;NKX2-1,4:1.03412461588;PAX6:1.00955631855;PBX1:0.970761196183;ELF1,2,4:0.97073590559;GATA6:0.925972574982;TEF:0.886688925709;TFDP1:0.88508759569;PAX8:0.863126013946;BPTF:0.755764099067;PITX1..3:0.732300349914;ZBTB16:0.73107921195;HOX{A5,B5}:0.687297383603;RUNX1..3:0.658462613096;AIRE:0.626240828442;GFI1:0.622512820587;POU3F1..4:0.616818464552;CRX:0.608358753508;FOXP3:0.594399691927;VSX1,2:0.592740314709;LEF1_TCF7_TCF7L1,2:0.568001528235;FOXD3:0.545909289738;NR5A1,2:0.542562243037;KLF4:0.536568686057;FOX{I1,J2}:0.531126203595;POU2F1..3:0.524696491779;NKX3-1:0.475471266743;ONECUT1,2:0.465743460062;SNAI1..3:0.462623012476;CUX2:0.457428805537;NKX2-2,8:0.445405805436;RFX2..5_RFXANK_RFXAP:0.44132514467;HOX{A4,D4}:0.430696900681;HOXA9_MEIS1:0.411791518137;PAX4:0.404891358777;LHX3,4:0.397623817458;NR1H4:0.381377005083;SPI1:0.37245009173;POU6F1:0.336993217634;NANOG:0.319329463534;EVI1:0.317593812008;SPIB:0.299278279068;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.280510666213;ETS1,2:0.238677751877;PPARG:0.222208683767;ZEB1:0.197601757189;POU1F1:0.17169299141;GATA4:0.171182837868;OCT4_SOX2{dimer}:0.168545094104;RORA:0.151476315836;TGIF1:0.139065972903;EN1,2:0.126261000864;PAX3,7:0.121599470351;ATF5_CREB3:0.109975901073;PRRX1,2:0.0942636206044;NKX2-3_NKX2-5:0.0803950702721;GCM1,2:0.063128630542;IRF1,2:0.0525181780781;ZNF148:0.0324866047568;HOX{A6,A7,B6,B7}:0.00608294155609;HES1:-0.00117880380118;LMO2:-0.00243799700244;ZNF384:-0.00401737283444;CREB1:-0.00526314599097;RFX1:-0.00742195434223;SOX5:-0.0145704460478;SOX17:-0.0159685298473;PDX1:-0.0168739027452;AR:-0.0250530706578;FOXP1:-0.0303363292745;FOXQ1:-0.049199642017;CDC5L:-0.0932013685721;ATF4:-0.10101923074;HNF4A_NR2F1,2:-0.113159789834;NANOG{mouse}:-0.113704144674;FOX{F1,F2,J1}:-0.124809020634;RREB1:-0.139165586121;IRF7:-0.144236819591;SOX{8,9,10}:-0.158973551665;UFEwm:-0.163138517275;STAT1,3:-0.175472208206;MYOD1:-0.187958057319;HNF1A:-0.204664412858;bHLH_family:-0.221130599243;ALX1:-0.233517565561;SOX2:-0.235879522057;HSF1,2:-0.247691574832;STAT5{A,B}:-0.255560896582;TOPORS:-0.269212048976;HMGA1,2:-0.273173853403;POU5F1:-0.309964578241;DBP:-0.325581696609;ZFP161:-0.332033719942;PAX5:-0.376883467173;MYBL2:-0.39260035315;NFKB1_REL_RELA:-0.445579236786;NR3C1:-0.448148829497;NFIL3:-0.454596366754;ADNP_IRX_SIX_ZHX:-0.460547590584;NFIX:-0.48651001858;PAX1,9:-0.491786990578;AHR_ARNT_ARNT2:-0.504286176928;RXRA_VDR{dimer}:-0.50621360672;FOXN1:-0.530003146599;FOXO1,3,4:-0.538934446136;MEF2{A,B,C,D}:-0.54219299032;REST:-0.578119850914;ESRRA:-0.585647924599;NFE2L1:-0.585653256185;SREBF1,2:-0.607022126625;PRDM1:-0.60818858134;ZIC1..3:-0.624203292865;TLX2:-0.625077047527;NHLH1,2:-0.628408987461;HAND1,2:-0.63512077346;CEBPA,B_DDIT3:-0.646301646712;HIC1:-0.651992690704;GZF1:-0.668059170078;BACH2:-0.686366127863;MTE{core}:-0.687756778261;PAX2:-0.697972511418;TAL1_TCF{3,4,12}:-0.701778487109;FOS_FOS{B,L1}_JUN{B,D}:-0.701822393897;GFI1B:-0.717734960685;ZNF423:-0.723209179073;FOSL2:-0.726156699798;HLF:-0.743121569838;MED-1{core}:-0.748029897954;NFE2:-0.756572834961;SPZ1:-0.762456476531;NKX3-2:-0.777810036443;NFE2L2:-0.80738225128;SRF:-0.81111612835;ATF6:-0.819734836809;MZF1:-0.841270398094;RXR{A,B,G}:-0.842493439647;GTF2A1,2:-0.863624631578;HIF1A:-0.866272680394;HBP1_HMGB_SSRP1_UBTF:-0.875520867272;EGR1..3:-0.877413452171;TFAP2B:-0.899088261361;MYFfamily:-0.931794237346;IKZF1:-0.97113162294;ZBTB6:-0.989948190507;ZNF238:-0.996371247166;XCPE1{core}:-1.01161124955;JUN:-1.05095461477;TP53:-1.05100143147;STAT2,4,6:-1.06025552493;SMAD1..7,9:-1.08612496327;SP1:-1.09109691118;EBF1:-1.10288910613;ESR1:-1.11971130406;GTF2I:-1.12471596124;MAZ:-1.17084977941;ALX4:-1.1710823719;XBP1:-1.17149016335;TEAD1:-1.19313355527;HMX1:-1.20117413049;EP300:-1.21012400158;PATZ1:-1.22636945933;ATF2:-1.2294193375;FOXL1:-1.25604212868;MTF1:-1.31044219045;FOX{D1,D2}:-1.38740471793;TBX4,5:-1.40795243087;NFATC1..3:-1.41152018679;GLI1..3:-1.41215936924;TBP:-1.42209083279;NR6A1:-1.43052709317;TLX1..3_NFIC{dimer}:-1.58538637372;MAFB:-1.66754606058;TFAP4:-1.89513045814;TFAP2{A,C}:-1.98881346475;TFCP2:-2.44551524326 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10464-106H5;search_select_hide=table117:FF:10464-106H5 | |||
}} | }} |
Latest revision as of 14:03, 3 June 2020
Name: | acute lymphoblastic leukemia (T-ALL) cell line:Jurkat |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11253 |
Sample type: | cell lines |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Download raw sequence, BAM & CTSS | ||||||||||||||
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HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11253
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11253
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.163 |
10 | 10 | 0.0573 |
100 | 100 | 0.264 |
101 | 101 | 0.641 |
102 | 102 | 0.606 |
103 | 103 | 0.9 |
104 | 104 | 0.976 |
105 | 105 | 0.716 |
106 | 106 | 0.0063 |
107 | 107 | 0.00787 |
108 | 108 | 0.49 |
109 | 109 | 0.23 |
11 | 11 | 0.56 |
110 | 110 | 0.907 |
111 | 111 | 0.0451 |
112 | 112 | 0.224 |
113 | 113 | 0.252 |
114 | 114 | 0.881 |
115 | 115 | 0.897 |
116 | 116 | 0.743 |
117 | 117 | 0.254 |
118 | 118 | 0.895 |
119 | 119 | 0.293 |
12 | 12 | 0.875 |
120 | 120 | 0.762 |
121 | 121 | 1 |
122 | 122 | 0.988 |
123 | 123 | 0.303 |
124 | 124 | 0.147 |
125 | 125 | 0.0649 |
126 | 126 | 0.81 |
127 | 127 | 0.22 |
128 | 128 | 0.0288 |
129 | 129 | 0.632 |
13 | 13 | 0.0732 |
130 | 130 | 0.0385 |
131 | 131 | 0.387 |
132 | 132 | 0.878 |
133 | 133 | 0.177 |
134 | 134 | 0.562 |
135 | 135 | 0.422 |
136 | 136 | 0.146 |
137 | 137 | 0.641 |
138 | 138 | 0.789 |
139 | 139 | 0.947 |
14 | 14 | 0.45 |
140 | 140 | 0.551 |
141 | 141 | 0.819 |
142 | 142 | 0.613 |
143 | 143 | 0.029 |
144 | 144 | 0.906 |
145 | 145 | 0.627 |
146 | 146 | 0.221 |
147 | 147 | 0.135 |
148 | 148 | 0.706 |
149 | 149 | 0.0456 |
15 | 15 | 0.363 |
150 | 150 | 0.639 |
151 | 151 | 0.266 |
152 | 152 | 0.0136 |
153 | 153 | 0.63 |
154 | 154 | 0.528 |
155 | 155 | 0.119 |
156 | 156 | 0.609 |
157 | 157 | 0.382 |
158 | 158 | 0.721 |
159 | 159 | 0.988 |
16 | 16 | 0.358 |
160 | 160 | 0.879 |
161 | 161 | 0.518 |
162 | 162 | 0.3 |
163 | 163 | 0.824 |
164 | 164 | 0.906 |
165 | 165 | 0.738 |
166 | 166 | 0.843 |
167 | 167 | 0.0103 |
168 | 168 | 0.492 |
169 | 169 | 0.0661 |
17 | 17 | 0.376 |
18 | 18 | 0.556 |
19 | 19 | 0.0393 |
2 | 2 | 0.0803 |
20 | 20 | 0.266 |
21 | 21 | 0.608 |
22 | 22 | 0.224 |
23 | 23 | 0.0143 |
24 | 24 | 0.222 |
25 | 25 | 0.292 |
26 | 26 | 0.348 |
27 | 27 | 0.924 |
28 | 28 | 0.557 |
29 | 29 | 0.228 |
3 | 3 | 0.676 |
30 | 30 | 0.123 |
31 | 31 | 0.474 |
32 | 32 | 0.00579 |
33 | 33 | 0.954 |
34 | 34 | 0.451 |
35 | 35 | 0.303 |
36 | 36 | 0.0781 |
37 | 37 | 0.412 |
38 | 38 | 0.891 |
39 | 39 | 0.15 |
4 | 4 | 0.00838 |
40 | 40 | 0.611 |
41 | 41 | 0.733 |
42 | 42 | 0.155 |
43 | 43 | 0.934 |
44 | 44 | 0.273 |
45 | 45 | 0.156 |
46 | 46 | 0.649 |
47 | 47 | 0.12 |
48 | 48 | 0.454 |
49 | 49 | 0.496 |
5 | 5 | 0.927 |
50 | 50 | 0.766 |
51 | 51 | 0.764 |
52 | 52 | 0.0164 |
53 | 53 | 0.651 |
54 | 54 | 0.325 |
55 | 55 | 0.0152 |
56 | 56 | 0.703 |
57 | 57 | 0.372 |
58 | 58 | 0.765 |
59 | 59 | 0.44 |
6 | 6 | 0.806 |
60 | 60 | 0.108 |
61 | 61 | 0.227 |
62 | 62 | 0.886 |
63 | 63 | 0.93 |
64 | 64 | 0.634 |
65 | 65 | 0.271 |
66 | 66 | 0.00198 |
67 | 67 | 0.803 |
68 | 68 | 0.448 |
69 | 69 | 0.567 |
7 | 7 | 0.529 |
70 | 70 | 0.147 |
71 | 71 | 0.442 |
72 | 72 | 0.778 |
73 | 73 | 0.0372 |
74 | 74 | 0.938 |
75 | 75 | 0.325 |
76 | 76 | 0.38 |
77 | 77 | 0.0848 |
78 | 78 | 0.567 |
79 | 79 | 0.232 |
8 | 8 | 0.549 |
80 | 80 | 0.944 |
81 | 81 | 0.706 |
82 | 82 | 0.753 |
83 | 83 | 0.781 |
84 | 84 | 0.834 |
85 | 85 | 0.0337 |
86 | 86 | 0.746 |
87 | 87 | 0.857 |
88 | 88 | 0.441 |
89 | 89 | 0.265 |
9 | 9 | 0.335 |
90 | 90 | 0.00561 |
91 | 91 | 0.506 |
92 | 92 | 0.109 |
93 | 93 | 0.857 |
94 | 94 | 0.768 |
95 | 95 | 0.546 |
96 | 96 | 0.986 |
97 | 97 | 0.103 |
98 | 98 | 0.948 |
99 | 99 | 0.356 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11253
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100661 JURKAT cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000084 (T cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0102144 (acute lymphoblastic leukemia cell line sample)
0102504 (T-lymphoblastic leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0100741 (lymphocytic leukemia cell line sample)
0100773 (lymphoblastoid cell line sample)
0100739 (lymphoblastic leukemia cell line sample)
0100661 (JURKAT cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)