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(Created page with "{{f5samples |id=FF:10400-106A4 |name=acute myeloid leukemia (FAB M5) cell line:THP-1, biol_rep1, tech_rep1 (revived) |sample_id=10400 |rna_tube_id=106A4 |rna_box=106 |rn...")
 
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{{f5samples
{{f5samples
|id=FF:10400-106A4
|DRA_sample_Accession=CAGE@SAMD00005601
|name=acute myeloid leukemia (FAB M5) cell line:THP-1, biol_rep1, tech_rep1 (revived)
|accession_numbers=CAGE;DRX007814;DRR008686;DRZ000111;DRZ001496;DRZ011461;DRZ012846
|sample_id=10400
|ancestors_in_anatomy_facet=
|rna_tube_id=106A4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576
|rna_box=106
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692
|rna_position=A4
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101370,FF:0101035,FF:0101883,FF:0102332,FF:0100740
|sample_cell_lot=
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.52!332.83!IRF8;;chr11:47400078..47400106,-!p1@SPI1!2.29!193.93!SPI1;;chr6:135502501..135502546,+!p1@MYB!2.06!136.44!MYB;;chr2:68592406..68592424,+!p1@PLEK!1.97!92.83!PLEK;;chr9:96717629..96717644,-!p1@BARX1!1.86!71.80!BARX1;;chr12:54778471..54778528,-!p1@ZNF385A!1.83!66.88!ZNF385A;;chr7:115670804..115670825,-!p1@TFEC!1.73!52.79!TFEC;;chr6:135502408..135502459,+!p2@MYB!1.69!54.80!MYB;;chr19:33793430..33793447,-!p1@CEBPA!1.63!167.09!CEBPA;;chr3:18486354..18486377,-!p2@SATB1!1.60!48.09!SATB1;;chr1:92951607..92951661,-!p1@GFI1!1.60!38.70!GFI1;;chr10:31288398..31288455,-!p2@ZNF438!1.59!44.06!ZNF438;;chr2:63277948..63277974,+!p1@OTX1!1.52!32.43!OTX1;;chr2:200322654..200322707,-!p2@SATB2!1.50!44.06!SATB2;;chr1:156460436..156460462,-!p7@MEF2D!1.50!30.64!MEF2D;;chr7:50344289..50344323,+!p1@IKZF1!1.50!30.42!IKZF1;;chr13:72441315..72441454,-!p1@DACH1!1.49!57.93!DACH1;;chr1:92949331..92949377,-!p2@GFI1!1.49!30.20!GFI1;;chr1:41157363..41157416,+!p1@NFYC!1.40!441.31!NFYC;;chr1:41157421..41157482,+!p2@NFYC!1.40!268.64!NFYC;;chr2:175199675..175199688,+!p1@SP9!1.40!24.16!SP9;;chr6:85473156..85473210,-!p2@TBX18!1.39!28.63!TBX18;;chr7:27205136..27205164,-!p1@HOXA9!1.38!22.81!HOXA9;;chr5:72744594..72744609,-!p1@FOXD1!1.35!95.06!FOXD1;;chr1:40942922..40942997,+!p1@ZNF642!1.35!55.02!ZNF642;;chr1:40997285..40997352,+!p1@ZNF684!1.34!71.58!ZNF684;;chr14:75988771..75988826,+!p1@BATF!1.34!27.96!BATF;;chr7:137620650..137620677,-!p3@CREB3L2!1.34!21.03!CREB3L2;;chr2:145277640..145277771,-!p1@ZEB2!1.33!262.60!ZEB2;;chr7:137620684..137620711,-!p4@CREB3L2!1.33!20.35!CREB3L2;;chr6:135516877..135516900,+!p5@MYB!1.30!19.01!MYB;;chr11:47400062..47400077,-!p2@SPI1!1.30!19.01!SPI1;;chr5:88178983..88179012,-!p1@MEF2C!1.28!134.88!MEF2C;;chr6:135502472..135502489,+!p3@MYB!1.28!18.12!MYB;;chr1:50889103..50889145,-!p1@DMRTA2!1.27!17.45!DMRTA2;;chr18:55102598..55102623,+!p1@ONECUT2!1.26!17.22!ONECUT2;;chr7:113726357..113726443,+!p1@FOXP2!1.25!28.41!FOXP2;;chr7:128577972..128578047,+!p1@IRF5!1.25!26.17!IRF5;;chr1:40997363..40997392,+!p2@ZNF684!1.25!21.70!ZNF684;;chr6:34204973..34204990,+!p4@HMGA1!1.24!212.94!HMGA1;;chr7:27224795..27224840,-!p2@HOXA11!1.22!15.66!HOXA11;;chr7:27224842..27224872,-!p1@HOXA11!1.22!15.66!HOXA11;;chr7:27205106..27205134,-!p2@HOXA9!1.22!15.43!HOXA9;;chr1:156470515..156470542,-!p2@MEF2D!1.20!77.62!MEF2D;;chr1:3569072..3569093,+!p1@TP73!1.20!14.99!TP73;;chr3:157824001..157824078,-!p2@SHOX2!1.20!14.99!SHOX2;;chr2:63277978..63277995,+!p2@OTX1!1.19!14.54!OTX1;;chr7:50343634..50343717,+!p2@IKZF1!1.19!14.32!IKZF1;;chr18:55102628..55102646,+!p2@ONECUT2!1.18!14.09!ONECUT2;;chr18:22932080..22932170,-!p1@ZNF521!1.17!58.60!ZNF521;;chr10:31288370..31288393,-!p3@ZNF438!1.17!13.87!ZNF438;;chr7:27213893..27213954,-!p1@HOXA10!1.17!13.87!HOXA10;;chr2:100759037..100759058,-!p2@AFF3!1.17!13.64!AFF3;;chr1:156460473..156460486,-!p12@MEF2D!1.16!13.42!MEF2D;;chr3:18480217..18480239,-!p3@SATB1!1.15!12.97!SATB1;;chr1:247171316..247171336,-!p3@ZNF695!1.14!19.24!ZNF695;;chr16:54319010..54319041,-!p8@IRX3!1.14!12.75!IRX3;;chr13:41593425..41593480,-!p1@ELF1!1.12!77.62!ELF1;;chr11:47399996..47400014,-!p4@SPI1!1.11!11.85!SPI1;;chr1:92952473..92952489,-!p3@GFI1!1.11!11.85!GFI1;;chr16:54320646..54320672,-!p2@IRX3!1.10!17.67!IRX3;;chr18:22805268..22805280,-!p8@ZNF521!1.10!11.63!ZNF521;;chr11:47399947..47399961,-!p3@SPI1!1.09!11.41!SPI1;;chr3:157824202..157824211,-!p3@SHOX2!1.09!11.18!SHOX2;;chr16:54320617..54320643,-!p3@IRX3!1.08!14.09!IRX3;;chr1:167298300..167298319,+!p2@POU2F1!1.07!10.74!POU2F1;;chr2:68592394..68592405,+!p2@PLEK!1.04!10.07!PLEK;;chr7:50344251..50344288,+!p3@IKZF1!1.04!10.07!IKZF1;;chr2:200322229..200322251,-!p3@SATB2!1.04!9.84!SATB2;;chr17:41277372..41277418,-!p1@BRCA1!1.03!36.24!BRCA1;;chr1:247242048..247242098,-!p1@ZNF670,p1@ZNF695!1.03!35.56!ZNF670;;chr17:79881332..79881348,-!p3@MAFG!1.03!14.32!MAFG;;chr21:34442439..34442455,+!p1@OLIG1!1.02!9.39!OLIG1;;chr11:47400032..47400043,-!p5@SPI1!1.02!9.39!SPI1;;chr16:54320280..54320291,-!p9@IRX3!1.01!9.17!IRX3;;chr6:135516909..135516925,+!p6@MYB!1.01!9.17!MYB;;chr1:167298384..167298412,+!p3@POU2F1!1.01!9.17!POU2F1;;chr20:42295745..42295765,+!p1@MYBL2!1.00!148.97!MYBL2;;chr1:40627038..40627071,+!p1@RLF!1.00!121.46!RLF;;chr11:128563948..128564003,+!p1@FLI1!1.00!110.05!FLI1;;chr16:54320675..54320715,-!p1@IRX3!1.00!19.91!IRX3;;chr2:145277882..145277967,-!p3@ZEB2!1.00!15.88!ZEB2;;chr1:156470494..156470505,-!p3@MEF2D!1.00!13.20!MEF2D;;chr12:54694758..54694805,-!p1@NFE2!1.00!10.96!NFE2;;chrY:21906594..21906622,-!p1@KDM5D!1.00!8.95!KDM5D;;chr7:27239703..27239715,-!p1@HOXA13!0.98!8.50!HOXA13;;chr16:54320158..54320200,-!p5@IRX3!0.97!12.08!IRX3;;chr1:167298425..167298440,+!p8@POU2F1!0.97!8.28!POU2F1;;chrX:66763856..66763896,+!p1@AR!0.96!11.85!AR;;chr18:22804637..22804660,-!p10@ZNF521!0.96!8.05!ZNF521;;chr11:47400045..47400060,-!p6@SPI1!0.96!8.05!SPI1;;chr16:54320322..54320343,-!p7@IRX3!0.95!7.83!IRX3;;chr1:92949505..92949543,-!p5@GFI1!0.95!7.83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|sample_dev_stage=1 year old child
|ffid_belonging_in_development=CL:0000049,CL:0000134
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=1
|sample_ethnicity=J
|rna_rin=9.90000
|rna_od260/230=2.04000
|rna_od260/280=2.09667
|sample_cell_type=monoblast
|sample_cell_line=THP-1
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=FREEZOME
|sample_disease=acute myeloid leukemia (FAB M5)
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=49.43200
|rna_concentration=0.98864
|sample_note=machine failed, remainder reloaded, low amount
|profile_hcage=CNhs10723,LSID691,release008,COMPLETED
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|profile_srnaseq=,,,
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|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=DOID:0050686,DOID:0060083,DOID:1240,DOID:14566,DOID:162,DOID:2531,DOID:4,DOID:8692
|sample_description=
 
|fonse_cell_line=FF:0101035
|fonse_cell_line=FF:0101035
|fonse_cell_line_closure=FF:0101035
|fonse_cell_line_closure=FF:0101035
Line 67: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528revived%2529.CNhs10723.10400-106A4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528revived%2529.CNhs10723.10400-106A4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528revived%2529.CNhs10723.10400-106A4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528revived%2529.CNhs10723.10400-106A4.hg38.nobarcode.ctss.bed.gz
|id=FF:10400-106A4
|is_a=EFO:0002091;;FF:0000210;;FF:0101370;;FF:0101883
|is_obsolete=
|library_id=CNhs10723
|library_id_phase_based=2:CNhs10723
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10400
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10400
|name=acute myeloid leukemia (FAB M5) cell line:THP-1 (revived)
|namespace=FANTOM5
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|rna_box=106
|rna_catalog_number=
|rna_concentration=0.98864
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.04
|rna_od260/280=2.096666667
|rna_position=A4
|rna_rin=9.9
|rna_sample_type=total RNA
|rna_tube_id=106A4
|rna_weight_ug=49.432
|sample_age=1
|sample_category=cell lines
|sample_cell_catalog=
|sample_cell_line=THP-1
|sample_cell_lot=
|sample_cell_type=monoblast
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=
|sample_description=
|sample_dev_stage=1 year old child
|sample_disease=acute myeloid leukemia (FAB M5)
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=FREEZOME
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.2998723954611e-271!GO:0043227;membrane-bound organelle;8.2465342864874e-242!GO:0043231;intracellular membrane-bound organelle;1.43715637820848e-241!GO:0043226;organelle;4.60349942263659e-228!GO:0043229;intracellular organelle;1.84105749340721e-227!GO:0044422;organelle part;1.3642645815257e-160!GO:0005737;cytoplasm;1.10198726678502e-159!GO:0044446;intracellular organelle part;6.27633066636548e-159!GO:0005634;nucleus;3.92160676012254e-123!GO:0044237;cellular metabolic process;4.83835984617031e-123!GO:0044238;primary metabolic process;1.14876880355686e-119!GO:0044444;cytoplasmic part;3.30979036599647e-118!GO:0032991;macromolecular complex;1.85977231372525e-115!GO:0043170;macromolecule metabolic process;4.65145130122322e-114!GO:0044428;nuclear part;4.10281415926272e-100!GO:0030529;ribonucleoprotein complex;8.18995161950751e-98!GO:0043233;organelle lumen;3.21516261993014e-89!GO:0031974;membrane-enclosed lumen;3.21516261993014e-89!GO:0003723;RNA binding;2.03322994861943e-87!GO:0043283;biopolymer metabolic process;8.92508111701784e-74!GO:0005739;mitochondrion;1.07636852636081e-70!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.57725551611538e-69!GO:0010467;gene expression;7.19127253076127e-65!GO:0006396;RNA processing;8.80011476254476e-62!GO:0005515;protein binding;1.44740289874658e-59!GO:0043234;protein complex;3.43980902000709e-58!GO:0031981;nuclear lumen;4.01619030831894e-57!GO:0006412;translation;3.82799393298956e-55!GO:0005840;ribosome;8.13401170412502e-54!GO:0044429;mitochondrial part;1.74373400792376e-50!GO:0016071;mRNA metabolic process;3.00040896961653e-49!GO:0006259;DNA metabolic process;9.6433533287403e-49!GO:0003676;nucleic acid binding;7.86410443601574e-48!GO:0019538;protein metabolic process;1.06029540071768e-47!GO:0003735;structural constituent of ribosome;1.89769600605878e-47!GO:0031967;organelle envelope;4.01786765337237e-47!GO:0031975;envelope;1.06143135606459e-46!GO:0033036;macromolecule localization;9.12397121904877e-45!GO:0031090;organelle membrane;1.12258647560565e-44!GO:0008380;RNA splicing;1.15956081932444e-44!GO:0016043;cellular component organization and biogenesis;1.72533409044283e-44!GO:0009058;biosynthetic process;3.92951403905529e-44!GO:0044260;cellular macromolecule metabolic process;1.49762091359096e-43!GO:0006397;mRNA processing;1.49762091359096e-43!GO:0044267;cellular protein metabolic process;2.78658980824696e-43!GO:0015031;protein transport;4.4122155907097e-43!GO:0044249;cellular biosynthetic process;6.2845936889709e-43!GO:0009059;macromolecule biosynthetic process;2.43120138298256e-42!GO:0045184;establishment of protein localization;4.90179931839618e-41!GO:0033279;ribosomal subunit;3.16549551052777e-40!GO:0008104;protein localization;9.11105066603281e-40!GO:0006996;organelle organization and biogenesis;7.87398456954176e-39!GO:0005829;cytosol;4.21108194456276e-38!GO:0065003;macromolecular complex assembly;1.95191040029755e-36!GO:0005654;nucleoplasm;3.7948639541533e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.1761163109942e-35!GO:0007049;cell cycle;4.43131560884584e-35!GO:0043228;non-membrane-bound organelle;5.22767285980361e-34!GO:0043232;intracellular non-membrane-bound organelle;5.22767285980361e-34!GO:0016070;RNA metabolic process;5.78293491951518e-34!GO:0046907;intracellular transport;2.04363315236409e-33!GO:0005681;spliceosome;5.8629369327408e-33!GO:0022607;cellular component assembly;3.25413741789517e-31!GO:0005740;mitochondrial envelope;5.01459499016209e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.1889172904308e-29!GO:0006974;response to DNA damage stimulus;1.47405165247e-29!GO:0005694;chromosome;3.05164268887595e-29!GO:0019866;organelle inner membrane;5.59542997613945e-29!GO:0006886;intracellular protein transport;5.59542997613945e-29!GO:0031966;mitochondrial membrane;9.10627529197121e-29!GO:0044451;nucleoplasm part;1.11497542867444e-28!GO:0022402;cell cycle process;2.84292937584352e-28!GO:0000278;mitotic cell cycle;1.36612500146301e-27!GO:0000166;nucleotide binding;1.59648793656028e-27!GO:0005743;mitochondrial inner membrane;5.51982046009196e-27!GO:0006281;DNA repair;8.67570960037364e-27!GO:0051649;establishment of cellular localization;6.07122962517003e-26!GO:0044445;cytosolic part;6.57111535775594e-26!GO:0044427;chromosomal part;1.81641318807937e-25!GO:0051641;cellular localization;3.00090261264343e-25!GO:0051276;chromosome organization and biogenesis;2.88897939747722e-24!GO:0006119;oxidative phosphorylation;5.4541509289515e-24!GO:0022403;cell cycle phase;2.05684366979236e-23!GO:0000087;M phase of mitotic cell cycle;6.29545161183324e-23!GO:0031980;mitochondrial lumen;9.45089602546092e-23!GO:0005759;mitochondrial matrix;9.45089602546092e-23!GO:0007067;mitosis;1.88451248343414e-22!GO:0044265;cellular macromolecule catabolic process;1.90462569965099e-21!GO:0015935;small ribosomal subunit;4.07215402933736e-21!GO:0044455;mitochondrial membrane part;5.68571237012066e-21!GO:0006457;protein folding;7.44304994717111e-21!GO:0016874;ligase activity;1.10018128031477e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.14669696549573e-20!GO:0051301;cell division;1.20595705710773e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.21031270132062e-20!GO:0022618;protein-RNA complex assembly;1.39938912567317e-20!GO:0016462;pyrophosphatase activity;2.21635747486183e-20!GO:0015934;large ribosomal subunit;3.44584255590954e-20!GO:0000279;M phase;6.99788407348571e-20!GO:0009719;response to endogenous stimulus;8.05567029509485e-20!GO:0005730;nucleolus;8.41587433437362e-20!GO:0017111;nucleoside-triphosphatase activity;1.23290019479824e-19!GO:0006260;DNA replication;4.98420916810654e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;9.03047471667217e-19!GO:0048770;pigment granule;1.36169965230729e-18!GO:0042470;melanosome;1.36169965230729e-18!GO:0006512;ubiquitin cycle;1.55782328437161e-18!GO:0043285;biopolymer catabolic process;1.92129162401488e-18!GO:0006323;DNA packaging;4.45817183689482e-18!GO:0005746;mitochondrial respiratory chain;5.41621996779633e-18!GO:0032553;ribonucleotide binding;5.782047386156e-18!GO:0032555;purine ribonucleotide binding;5.782047386156e-18!GO:0009057;macromolecule catabolic process;7.58024693193723e-18!GO:0017076;purine nucleotide binding;1.23313930271757e-17!GO:0044248;cellular catabolic process;1.37099233891328e-17!GO:0051186;cofactor metabolic process;3.18350281555642e-17!GO:0012505;endomembrane system;3.90923910500663e-17!GO:0005524;ATP binding;6.96423338345795e-17!GO:0005635;nuclear envelope;7.5790658917393e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;7.70828963132658e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.02114418075477e-16!GO:0019941;modification-dependent protein catabolic process;1.15299051452943e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.15299051452943e-16!GO:0008135;translation factor activity, nucleic acid binding;1.21731796336646e-16!GO:0032559;adenyl ribonucleotide binding;1.43557157471358e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.18857195105111e-16!GO:0044257;cellular protein catabolic process;2.21598001885373e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.90197328154628e-16!GO:0000502;proteasome complex (sensu Eukaryota);3.10133982110233e-16!GO:0030554;adenyl nucleotide binding;5.05785358461621e-16!GO:0042254;ribosome biogenesis and assembly;5.77950409826028e-16!GO:0050136;NADH dehydrogenase (quinone) activity;7.13950701172035e-16!GO:0003954;NADH dehydrogenase activity;7.13950701172035e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.13950701172035e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;1.00940330812027e-15!GO:0000375;RNA splicing, via transesterification reactions;1.00940330812027e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.00940330812027e-15!GO:0006605;protein targeting;1.74325958275638e-15!GO:0050657;nucleic acid transport;2.69100174559585e-15!GO:0051236;establishment of RNA localization;2.69100174559585e-15!GO:0050658;RNA transport;2.69100174559585e-15!GO:0031965;nuclear membrane;2.91925828144739e-15!GO:0005761;mitochondrial ribosome;3.48781296605364e-15!GO:0000313;organellar ribosome;3.48781296605364e-15!GO:0016604;nuclear body;3.87140658113169e-15!GO:0044453;nuclear membrane part;3.87734031819595e-15!GO:0006403;RNA localization;4.45394603102055e-15!GO:0008134;transcription factor binding;1.01955274571249e-14!GO:0016887;ATPase activity;1.28232437327036e-14!GO:0006732;coenzyme metabolic process;1.37876097147657e-14!GO:0042623;ATPase activity, coupled;1.38007795887154e-14!GO:0043412;biopolymer modification;1.5289182049196e-14!GO:0051082;unfolded protein binding;2.58745428585162e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.90218146227239e-14!GO:0042773;ATP synthesis coupled electron transport;2.90218146227239e-14!GO:0005643;nuclear pore;4.41794572174917e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.99577269381126e-14!GO:0006913;nucleocytoplasmic transport;6.85566009001738e-14!GO:0030964;NADH dehydrogenase complex (quinone);7.51319842578835e-14!GO:0045271;respiratory chain complex I;7.51319842578835e-14!GO:0005747;mitochondrial respiratory chain complex I;7.51319842578835e-14!GO:0051726;regulation of cell cycle;1.13426966965089e-13!GO:0000074;regulation of progression through cell cycle;1.45301195291388e-13!GO:0051169;nuclear transport;1.53076735373102e-13!GO:0030163;protein catabolic process;1.68556021694733e-13!GO:0044432;endoplasmic reticulum part;2.0440131167757e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.07337481689066e-13!GO:0003743;translation initiation factor activity;3.03538901945952e-13!GO:0051028;mRNA transport;3.39123727440154e-13!GO:0006413;translational initiation;3.80920025112398e-13!GO:0000785;chromatin;7.59492574704612e-13!GO:0006333;chromatin assembly or disassembly;7.68043504283241e-13!GO:0016568;chromatin modification;8.62168791079006e-13!GO:0004386;helicase activity;8.64431960068296e-13!GO:0006399;tRNA metabolic process;2.02784223364192e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.55997619741099e-12!GO:0016607;nuclear speck;3.0685071511157e-12!GO:0006464;protein modification process;3.25605909407156e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.14289822511356e-12!GO:0046930;pore complex;5.73360787936815e-12!GO:0065004;protein-DNA complex assembly;1.12707905056753e-11!GO:0000775;chromosome, pericentric region;1.37936898557142e-11!GO:0065002;intracellular protein transport across a membrane;1.69011015122047e-11!GO:0006446;regulation of translational initiation;1.83880639803987e-11!GO:0009259;ribonucleotide metabolic process;2.68250712422424e-11!GO:0006364;rRNA processing;3.7557362345609e-11!GO:0016192;vesicle-mediated transport;4.07309307565699e-11!GO:0008026;ATP-dependent helicase activity;4.13505436227859e-11!GO:0050794;regulation of cellular process;5.78517572592315e-11!GO:0006163;purine nucleotide metabolic process;6.40918880717616e-11!GO:0016072;rRNA metabolic process;6.72203332365199e-11!GO:0048193;Golgi vesicle transport;7.52968688979599e-11!GO:0005783;endoplasmic reticulum;7.67912605748704e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.16106098306431e-10!GO:0043687;post-translational protein modification;1.16106098306431e-10!GO:0019222;regulation of metabolic process;1.24121201796412e-10!GO:0051188;cofactor biosynthetic process;1.44753037480539e-10!GO:0006366;transcription from RNA polymerase II promoter;1.46617450205175e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.62520851617397e-10!GO:0012501;programmed cell death;2.09812804270295e-10!GO:0006915;apoptosis;2.52541078415472e-10!GO:0009260;ribonucleotide biosynthetic process;2.85919859290682e-10!GO:0006164;purine nucleotide biosynthetic process;3.09193777870585e-10!GO:0016779;nucleotidyltransferase activity;3.45300027460893e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.59358125225578e-10!GO:0009056;catabolic process;3.64895082871725e-10!GO:0009055;electron carrier activity;4.14686661291898e-10!GO:0008639;small protein conjugating enzyme activity;4.36192312463941e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.36192312463941e-10!GO:0009150;purine ribonucleotide metabolic process;5.10683244493855e-10!GO:0043566;structure-specific DNA binding;5.80870948108098e-10!GO:0005789;endoplasmic reticulum membrane;6.74361163217072e-10!GO:0008565;protein transporter activity;9.61494049142842e-10!GO:0004842;ubiquitin-protein ligase activity;1.1446179434091e-09!GO:0005819;spindle;1.14749399889331e-09!GO:0003712;transcription cofactor activity;1.1779461984897e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.4343791309099e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.56171278729026e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.56171278729026e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.56171278729026e-09!GO:0019787;small conjugating protein ligase activity;1.56171278729026e-09!GO:0009060;aerobic respiration;1.72242221609323e-09!GO:0016787;hydrolase activity;1.9250039789066e-09!GO:0006334;nucleosome assembly;1.94031828433471e-09!GO:0017038;protein import;1.94031828433471e-09!GO:0008219;cell death;2.00502213706252e-09!GO:0016265;death;2.00502213706252e-09!GO:0006461;protein complex assembly;2.18371114181366e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.40135285319554e-09!GO:0043038;amino acid activation;2.44029194282053e-09!GO:0006418;tRNA aminoacylation for protein translation;2.44029194282053e-09!GO:0043039;tRNA aminoacylation;2.44029194282053e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.89974956114098e-09!GO:0009141;nucleoside triphosphate metabolic process;3.40447104216891e-09!GO:0006261;DNA-dependent DNA replication;4.05309120288733e-09!GO:0015986;ATP synthesis coupled proton transport;4.62193470130599e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.62193470130599e-09!GO:0031497;chromatin assembly;4.63617931695632e-09!GO:0009142;nucleoside triphosphate biosynthetic process;5.07115196923993e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.07115196923993e-09!GO:0030532;small nuclear ribonucleoprotein complex;5.07733180474421e-09!GO:0009108;coenzyme biosynthetic process;5.99208794062884e-09!GO:0003697;single-stranded DNA binding;8.25891811411348e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.25891811411348e-09!GO:0009144;purine nucleoside triphosphate metabolic process;8.25891811411348e-09!GO:0015630;microtubule cytoskeleton;1.02503650204228e-08!GO:0016881;acid-amino acid ligase activity;1.52843760653588e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.52843760653588e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.52843760653588e-08!GO:0019829;cation-transporting ATPase activity;1.65846178117064e-08!GO:0045333;cellular respiration;1.69435837391655e-08!GO:0031323;regulation of cellular metabolic process;1.84041061706685e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.22352346198374e-08!GO:0051329;interphase of mitotic cell cycle;4.39774365529962e-08!GO:0046034;ATP metabolic process;4.84387993601243e-08!GO:0007051;spindle organization and biogenesis;5.10828826272081e-08!GO:0005813;centrosome;5.12025528483748e-08!GO:0051325;interphase;5.120475384538e-08!GO:0032446;protein modification by small protein conjugation;6.03158894276616e-08!GO:0005815;microtubule organizing center;6.66356102846527e-08!GO:0006754;ATP biosynthetic process;6.68851590568704e-08!GO:0006753;nucleoside phosphate metabolic process;6.68851590568704e-08!GO:0005839;proteasome core complex (sensu Eukaryota);7.81488923020179e-08!GO:0016567;protein ubiquitination;9.65325717006342e-08!GO:0006099;tricarboxylic acid cycle;1.15241009536524e-07!GO:0046356;acetyl-CoA catabolic process;1.15241009536524e-07!GO:0005657;replication fork;1.22999975807316e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.25116731288081e-07!GO:0005794;Golgi apparatus;1.58987072153671e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.61157930359934e-07!GO:0006350;transcription;2.13424038459869e-07!GO:0000075;cell cycle checkpoint;2.2807341475562e-07!GO:0051246;regulation of protein metabolic process;2.48803798461958e-07!GO:0016740;transferase activity;2.559218575649e-07!GO:0050789;regulation of biological process;2.74143085917939e-07!GO:0003713;transcription coactivator activity;2.93985228394694e-07!GO:0005793;ER-Golgi intermediate compartment;2.96847018909895e-07!GO:0006084;acetyl-CoA metabolic process;3.12510803071359e-07!GO:0007059;chromosome segregation;3.29063320847998e-07!GO:0004298;threonine endopeptidase activity;3.48870361937753e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.22099869651351e-07!GO:0051170;nuclear import;4.81231431017155e-07!GO:0009117;nucleotide metabolic process;5.13964794263289e-07!GO:0000151;ubiquitin ligase complex;6.49299525947055e-07!GO:0000245;spliceosome assembly;6.62455301389434e-07!GO:0009109;coenzyme catabolic process;6.95905532536536e-07!GO:0005667;transcription factor complex;7.81402378838642e-07!GO:0006752;group transfer coenzyme metabolic process;8.55350373928733e-07!GO:0051168;nuclear export;8.82304387300493e-07!GO:0045259;proton-transporting ATP synthase complex;8.82846723880285e-07!GO:0016363;nuclear matrix;9.85610633513074e-07!GO:0043623;cellular protein complex assembly;1.03815804862859e-06!GO:0030120;vesicle coat;1.12519078691429e-06!GO:0030662;coated vesicle membrane;1.12519078691429e-06!GO:0048475;coated membrane;1.20572786962684e-06!GO:0030117;membrane coat;1.20572786962684e-06!GO:0005773;vacuole;1.36038145942979e-06!GO:0006606;protein import into nucleus;1.44325051317696e-06!GO:0008094;DNA-dependent ATPase activity;1.44980146530797e-06!GO:0010468;regulation of gene expression;1.51951135760368e-06!GO:0042981;regulation of apoptosis;1.80620370387946e-06!GO:0006302;double-strand break repair;1.87771074439035e-06!GO:0007005;mitochondrion organization and biogenesis;1.89394992011446e-06!GO:0003677;DNA binding;1.91250176088147e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.1620376031917e-06!GO:0000323;lytic vacuole;2.21773711859135e-06!GO:0005764;lysosome;2.21773711859135e-06!GO:0051187;cofactor catabolic process;2.37509425431164e-06!GO:0006793;phosphorus metabolic process;2.48757220005677e-06!GO:0006796;phosphate metabolic process;2.48757220005677e-06!GO:0043067;regulation of programmed cell death;2.56141697005696e-06!GO:0003899;DNA-directed RNA polymerase activity;2.92545518665304e-06!GO:0006401;RNA catabolic process;3.64737986106778e-06!GO:0000776;kinetochore;3.83983809803295e-06!GO:0006613;cotranslational protein targeting to membrane;3.85519477091154e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.05477214924354e-06!GO:0007088;regulation of mitosis;5.40392690668182e-06!GO:0006310;DNA recombination;5.48223943319712e-06!GO:0003690;double-stranded DNA binding;5.59455118889228e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.64427209163801e-06!GO:0051427;hormone receptor binding;6.26759889327287e-06!GO:0005768;endosome;1.12855840707649e-05!GO:0003724;RNA helicase activity;1.18308226959106e-05!GO:0016563;transcription activator activity;1.34319927513798e-05!GO:0035257;nuclear hormone receptor binding;1.3587261112339e-05!GO:0005762;mitochondrial large ribosomal subunit;1.46630019505458e-05!GO:0000315;organellar large ribosomal subunit;1.46630019505458e-05!GO:0016491;oxidoreductase activity;1.64530810483438e-05!GO:0016853;isomerase activity;2.34154318745074e-05!GO:0032774;RNA biosynthetic process;2.36131170556662e-05!GO:0031324;negative regulation of cellular metabolic process;2.49817816652604e-05!GO:0006612;protein targeting to membrane;2.50953446189235e-05!GO:0003729;mRNA binding;2.71338686774904e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.96380144012532e-05!GO:0006351;transcription, DNA-dependent;3.41842557409211e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.76303438750368e-05!GO:0005788;endoplasmic reticulum lumen;3.78325828705261e-05!GO:0043021;ribonucleoprotein binding;4.00949573667182e-05!GO:0005798;Golgi-associated vesicle;4.36049313870777e-05!GO:0045786;negative regulation of progression through cell cycle;4.73773330951537e-05!GO:0048523;negative regulation of cellular process;5.08569999286995e-05!GO:0000786;nucleosome;5.17833387049783e-05!GO:0008168;methyltransferase activity;5.51795975703297e-05!GO:0008654;phospholipid biosynthetic process;6.16459658538669e-05!GO:0044452;nucleolar part;6.22428376518983e-05!GO:0009165;nucleotide biosynthetic process;6.43850900781925e-05!GO:0000059;protein import into nucleus, docking;8.60860443418065e-05!GO:0016310;phosphorylation;9.30181545329739e-05!GO:0007093;mitotic cell cycle checkpoint;9.37247445530173e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;9.52420214092141e-05!GO:0004518;nuclease activity;0.000104650055130193!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000107280187984189!GO:0006405;RNA export from nucleus;0.000108463618808255!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000132880258707615!GO:0046489;phosphoinositide biosynthetic process;0.000135154424114644!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000136723555381827!GO:0003684;damaged DNA binding;0.000146725951675605!GO:0005885;Arp2/3 protein complex;0.000146974863597558!GO:0016859;cis-trans isomerase activity;0.000153813905896859!GO:0006414;translational elongation;0.000157411944065164!GO:0004527;exonuclease activity;0.000161508740667243!GO:0003678;DNA helicase activity;0.000169171907011386!GO:0031988;membrane-bound vesicle;0.000174460233907805!GO:0045449;regulation of transcription;0.000175111688424259!GO:0008033;tRNA processing;0.000180829592754214!GO:0000228;nuclear chromosome;0.0001810043783283!GO:0009892;negative regulation of metabolic process;0.000185946290176381!GO:0030880;RNA polymerase complex;0.000186658125642832!GO:0032508;DNA duplex unwinding;0.000204275120641503!GO:0032392;DNA geometric change;0.000204275120641503!GO:0006383;transcription from RNA polymerase III promoter;0.000204963732005458!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000204963732005458!GO:0007052;mitotic spindle organization and biogenesis;0.000210905268623914!GO:0000314;organellar small ribosomal subunit;0.000222527837870708!GO:0005763;mitochondrial small ribosomal subunit;0.000222527837870708!GO:0006950;response to stress;0.000228818653678167!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000231396505106966!GO:0008186;RNA-dependent ATPase activity;0.000236404704621436!GO:0006091;generation of precursor metabolites and energy;0.000245809082799945!GO:0015980;energy derivation by oxidation of organic compounds;0.000254393948232532!GO:0016564;transcription repressor activity;0.000263316958260427!GO:0015992;proton transport;0.000283195452262837!GO:0030384;phosphoinositide metabolic process;0.000285053684239663!GO:0031982;vesicle;0.000299275630765818!GO:0006268;DNA unwinding during replication;0.000299706455256065!GO:0003682;chromatin binding;0.000305103728517533!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000311266208641129!GO:0006402;mRNA catabolic process;0.000312130135016571!GO:0006818;hydrogen transport;0.000314664863348674!GO:0043681;protein import into mitochondrion;0.000314664863348674!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000316086986119274!GO:0016023;cytoplasmic membrane-bound vesicle;0.000319635643915718!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000349210209445498!GO:0016481;negative regulation of transcription;0.000376670832956713!GO:0016251;general RNA polymerase II transcription factor activity;0.000378436307990725!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000399988114886939!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000400798350746591!GO:0000428;DNA-directed RNA polymerase complex;0.000400798350746591!GO:0000082;G1/S transition of mitotic cell cycle;0.000420271644444003!GO:0030867;rough endoplasmic reticulum membrane;0.000428591169398204!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000470303622880578!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000484428181574231!GO:0051052;regulation of DNA metabolic process;0.000487371895751483!GO:0048519;negative regulation of biological process;0.000522269512164572!GO:0045454;cell redox homeostasis;0.000534889480411216!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000543933003525147!GO:0046474;glycerophospholipid biosynthetic process;0.000544714704315881!GO:0051252;regulation of RNA metabolic process;0.000587518619537936!GO:0019752;carboxylic acid metabolic process;0.000590647799789175!GO:0019899;enzyme binding;0.000612932630289152!GO:0031252;leading edge;0.000633424650031494!GO:0006082;organic acid metabolic process;0.00064301577437045!GO:0043069;negative regulation of programmed cell death;0.000648834330086029!GO:0006626;protein targeting to mitochondrion;0.000655794012476862!GO:0065009;regulation of a molecular function;0.000665891686370079!GO:0065007;biological regulation;0.000665891686370079!GO:0043596;nuclear replication fork;0.000665891686370079!GO:0031072;heat shock protein binding;0.000681641229031874!GO:0004004;ATP-dependent RNA helicase activity;0.000684571296279978!GO:0044440;endosomal part;0.000686987992312923!GO:0010008;endosome membrane;0.000686987992312923!GO:0030658;transport vesicle membrane;0.000724977635602876!GO:0031410;cytoplasmic vesicle;0.000767723907703027!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000783797079491552!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000783797079491552!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000783797079491552!GO:0043066;negative regulation of apoptosis;0.000797681661620083!GO:0003924;GTPase activity;0.000807228064915313!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000827455912935687!GO:0006916;anti-apoptosis;0.000881469187569899!GO:0005525;GTP binding;0.000901328094044643!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000904598698973753!GO:0015399;primary active transmembrane transporter activity;0.000904598698973753!GO:0000819;sister chromatid segregation;0.00091236277362961!GO:0048500;signal recognition particle;0.000944482240852247!GO:0031124;mRNA 3'-end processing;0.00099314865391379!GO:0000922;spindle pole;0.00109173932212535!GO:0005770;late endosome;0.00113061874596213!GO:0006352;transcription initiation;0.00122984352401265!GO:0031968;organelle outer membrane;0.00125590381769329!GO:0000070;mitotic sister chromatid segregation;0.00127971196577165!GO:0003702;RNA polymerase II transcription factor activity;0.00128496791339524!GO:0044431;Golgi apparatus part;0.00128496791339524!GO:0051920;peroxiredoxin activity;0.00130569559055913!GO:0005741;mitochondrial outer membrane;0.0014530287134988!GO:0005684;U2-dependent spliceosome;0.00149049755285833!GO:0008312;7S RNA binding;0.00149979041993786!GO:0005769;early endosome;0.00156783363218014!GO:0033367;protein localization in mast cell secretory granule;0.001635409458812!GO:0033365;protein localization in organelle;0.001635409458812!GO:0033371;T cell secretory granule organization and biogenesis;0.001635409458812!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.001635409458812!GO:0033375;protease localization in T cell secretory granule;0.001635409458812!GO:0042629;mast cell granule;0.001635409458812!GO:0033377;maintenance of protein localization in T cell secretory granule;0.001635409458812!GO:0033364;mast cell secretory granule organization and biogenesis;0.001635409458812!GO:0033380;granzyme B localization in T cell secretory granule;0.001635409458812!GO:0033379;maintenance of protease localization in T cell secretory granule;0.001635409458812!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.001635409458812!GO:0033368;protease localization in mast cell secretory granule;0.001635409458812!GO:0033366;protein localization in secretory granule;0.001635409458812!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.001635409458812!GO:0033374;protein localization in T cell secretory granule;0.001635409458812!GO:0045045;secretory pathway;0.0016507208802765!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00167814719740519!GO:0030660;Golgi-associated vesicle membrane;0.00169277060004004!GO:0006270;DNA replication initiation;0.00169753397961121!GO:0007006;mitochondrial membrane organization and biogenesis;0.00169905397813355!GO:0006650;glycerophospholipid metabolic process;0.00175739138153835!GO:0019867;outer membrane;0.00176411062196941!GO:0006355;regulation of transcription, DNA-dependent;0.00184905577183833!GO:0006839;mitochondrial transport;0.0019065386543013!GO:0042393;histone binding;0.0019303498809536!GO:0009112;nucleobase metabolic process;0.00195112246848562!GO:0006506;GPI anchor biosynthetic process;0.00195796775355082!GO:0005876;spindle microtubule;0.00199685185009325!GO:0006611;protein export from nucleus;0.00203820016707028!GO:0006497;protein amino acid lipidation;0.00205096165848986!GO:0000792;heterochromatin;0.00213243177277455!GO:0005048;signal sequence binding;0.00215734088159042!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00220269548021496!GO:0045047;protein targeting to ER;0.00220269548021496!GO:0042802;identical protein binding;0.00221032568069792!GO:0046483;heterocycle metabolic process;0.00221032568069792!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00221032568069792!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00221032568069792!GO:0043601;nuclear replisome;0.00221032568069792!GO:0030894;replisome;0.00221032568069792!GO:0000152;nuclear ubiquitin ligase complex;0.00244080014106895!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00247880589410735!GO:0030663;COPI coated vesicle membrane;0.00253755538557564!GO:0030126;COPI vesicle coat;0.00253755538557564!GO:0019843;rRNA binding;0.002594620916571!GO:0000049;tRNA binding;0.00266577277109003!GO:0032940;secretion by cell;0.00267993922388126!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00272509020980231!GO:0051087;chaperone binding;0.00287662008812201!GO:0006505;GPI anchor metabolic process;0.00291368484514681!GO:0000725;recombinational repair;0.00306747969177091!GO:0000724;double-strand break repair via homologous recombination;0.00306747969177091!GO:0008276;protein methyltransferase activity;0.00306747969177091!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00306953913663082!GO:0043284;biopolymer biosynthetic process;0.00322239339289742!GO:0046467;membrane lipid biosynthetic process;0.00341012069394268!GO:0006417;regulation of translation;0.00347333557110099!GO:0032200;telomere organization and biogenesis;0.00347434074323297!GO:0000723;telomere maintenance;0.00347434074323297!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00358916316264447!GO:0044454;nuclear chromosome part;0.00364806734337557!GO:0042158;lipoprotein biosynthetic process;0.00376266491861639!GO:0044262;cellular carbohydrate metabolic process;0.00381190290023429!GO:0046966;thyroid hormone receptor binding;0.00390680134097921!GO:0006891;intra-Golgi vesicle-mediated transport;0.00397087914239844!GO:0006338;chromatin remodeling;0.0039903812665911!GO:0031123;RNA 3'-end processing;0.00401263673730284!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00407277737846554!GO:0007017;microtubule-based process;0.00420854993147708!GO:0030118;clathrin coat;0.00423635603141021!GO:0047485;protein N-terminus binding;0.004411152374935!GO:0000339;RNA cap binding;0.00461926155860307!GO:0031570;DNA integrity checkpoint;0.00464809628756815!GO:0016197;endosome transport;0.00468280230794096!GO:0003711;transcription elongation regulator activity;0.00471571154888922!GO:0043492;ATPase activity, coupled to movement of substances;0.00477763707293539!GO:0007034;vacuolar transport;0.00478165743148151!GO:0005774;vacuolar membrane;0.00479372633090963!GO:0008047;enzyme activator activity;0.00483581515135974!GO:0000178;exosome (RNase complex);0.00491228115684849!GO:0006595;polyamine metabolic process;0.00494983767932045!GO:0006520;amino acid metabolic process;0.00495331592881625!GO:0006406;mRNA export from nucleus;0.00495755335651502!GO:0043488;regulation of mRNA stability;0.00519849469652523!GO:0043487;regulation of RNA stability;0.00519849469652523!GO:0005669;transcription factor TFIID complex;0.00531239576173123!GO:0005758;mitochondrial intermembrane space;0.00534800934324402!GO:0008632;apoptotic program;0.00547157885374879!GO:0006144;purine base metabolic process;0.00550371258615107!GO:0016272;prefoldin complex;0.00569140910538018!GO:0005637;nuclear inner membrane;0.00578018287073794!GO:0000910;cytokinesis;0.00583488209057481!GO:0030521;androgen receptor signaling pathway;0.00594314784739943!GO:0007021;tubulin folding;0.00595144561820348!GO:0043065;positive regulation of apoptosis;0.00600714894847741!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00609863948627171!GO:0046983;protein dimerization activity;0.00618329975027379!GO:0030176;integral to endoplasmic reticulum membrane;0.00619905473558445!GO:0022890;inorganic cation transmembrane transporter activity;0.00623368204700686!GO:0032984;macromolecular complex disassembly;0.00623368204700686!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00623368204700686!GO:0008610;lipid biosynthetic process;0.00623579111072447!GO:0050662;coenzyme binding;0.00623579111072447!GO:0006284;base-excision repair;0.0062626916236445!GO:0051539;4 iron, 4 sulfur cluster binding;0.00635448784279532!GO:0035258;steroid hormone receptor binding;0.00642067885849957!GO:0007040;lysosome organization and biogenesis;0.00649029421460283!GO:0031577;spindle checkpoint;0.00652289912907982!GO:0031326;regulation of cellular biosynthetic process;0.00660195311397851!GO:0015631;tubulin binding;0.00661739553060865!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00667193460164655!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00669480087672905!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00673883950130359!GO:0000726;non-recombinational repair;0.00689179872524751!GO:0006289;nucleotide-excision repair;0.00693207943025669!GO:0000096;sulfur amino acid metabolic process;0.0069372952045474!GO:0003887;DNA-directed DNA polymerase activity;0.0070009842028014!GO:0033116;ER-Golgi intermediate compartment membrane;0.00726049207320718!GO:0000139;Golgi membrane;0.00726130283730989!GO:0051540;metal cluster binding;0.00728310885381231!GO:0051536;iron-sulfur cluster binding;0.00728310885381231!GO:0016584;nucleosome positioning;0.00729660419473315!GO:0006378;mRNA polyadenylation;0.00730269845578121!GO:0009451;RNA modification;0.00735916373965151!GO:0006376;mRNA splice site selection;0.00739301409582076!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00739301409582076!GO:0043068;positive regulation of programmed cell death;0.0075490351134552!GO:0008408;3'-5' exonuclease activity;0.00760081048334448!GO:0032603;fractalkine production;0.00763191080778936!GO:0050725;positive regulation of interleukin-1 beta biosynthetic process;0.00763191080778936!GO:0050752;regulation of fractalkine biosynthetic process;0.00763191080778936!GO:0045362;positive regulation of interleukin-1 biosynthetic process;0.00763191080778936!GO:0050754;positive regulation of fractalkine biosynthetic process;0.00763191080778936!GO:0001774;microglial cell activation;0.00763191080778936!GO:0050756;fractalkine metabolic process;0.00763191080778936!GO:0005766;primary lysosome;0.00763191080778936!GO:0050751;fractalkine biosynthetic process;0.00763191080778936!GO:0042222;interleukin-1 biosynthetic process;0.00763191080778936!GO:0050722;regulation of interleukin-1 beta biosynthetic process;0.00763191080778936!GO:0045360;regulation of interleukin-1 biosynthetic process;0.00763191080778936!GO:0042582;azurophil granule;0.00763191080778936!GO:0050720;interleukin-1 beta biosynthetic process;0.00763191080778936!GO:0032561;guanyl ribonucleotide binding;0.00763199465496454!GO:0019001;guanyl nucleotide binding;0.00763199465496454!GO:0030137;COPI-coated vesicle;0.00778086883964893!GO:0051287;NAD binding;0.00783090771695012!GO:0007243;protein kinase cascade;0.00783946545933374!GO:0005905;coated pit;0.00835145790094858!GO:0003714;transcription corepressor activity;0.00847614198072076!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00847614198072076!GO:0048522;positive regulation of cellular process;0.00881966063177851!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00891677622050726!GO:0000781;chromosome, telomeric region;0.00895951871357049!GO:0005832;chaperonin-containing T-complex;0.00906206609610045!GO:0051053;negative regulation of DNA metabolic process;0.00906462652541499!GO:0005791;rough endoplasmic reticulum;0.00915430922199213!GO:0016018;cyclosporin A binding;0.00920544015253526!GO:0009116;nucleoside metabolic process;0.00926505480893598!GO:0043022;ribosome binding;0.00926505480893598!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00931500289168449!GO:0050790;regulation of catalytic activity;0.00946147726753709!GO:0005874;microtubule;0.00961399191017864!GO:0004003;ATP-dependent DNA helicase activity;0.00965966462191204!GO:0003746;translation elongation factor activity;0.00989425690044612!GO:0016279;protein-lysine N-methyltransferase activity;0.00989425690044612!GO:0018024;histone-lysine N-methyltransferase activity;0.00989425690044612!GO:0016278;lysine N-methyltransferase activity;0.00989425690044612!GO:0004177;aminopeptidase activity;0.00995200399805442!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00995200399805442!GO:0015002;heme-copper terminal oxidase activity;0.00995200399805442!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00995200399805442!GO:0004129;cytochrome-c oxidase activity;0.00995200399805442!GO:0051789;response to protein stimulus;0.00995200399805442!GO:0006986;response to unfolded protein;0.00995200399805442!GO:0032259;methylation;0.010162398669675!GO:0044437;vacuolar part;0.0105961384062762!GO:0042054;histone methyltransferase activity;0.0106807154256849!GO:0016791;phosphoric monoester hydrolase activity;0.0106963077712633!GO:0043241;protein complex disassembly;0.0107243873632727!GO:0043414;biopolymer methylation;0.0109456316473556!GO:0005765;lysosomal membrane;0.0109798454663037!GO:0004674;protein serine/threonine kinase activity;0.0110021612739996!GO:0000118;histone deacetylase complex;0.0111760821109097!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0112293368533009!GO:0007010;cytoskeleton organization and biogenesis;0.0112341500779175!GO:0009124;nucleoside monophosphate biosynthetic process;0.01131167432184!GO:0009123;nucleoside monophosphate metabolic process;0.01131167432184!GO:0008139;nuclear localization sequence binding;0.0114867940677721!GO:0031970;organelle envelope lumen;0.011529938363397!GO:0004540;ribonuclease activity;0.0115817991509704!GO:0006767;water-soluble vitamin metabolic process;0.0116104867583368!GO:0008097;5S rRNA binding;0.0116881840138377!GO:0042770;DNA damage response, signal transduction;0.0116965541895686!GO:0016311;dephosphorylation;0.0118370296662785!GO:0048471;perinuclear region of cytoplasm;0.0129796938432832!GO:0016569;covalent chromatin modification;0.0129796938432832!GO:0006007;glucose catabolic process;0.0135607351328576!GO:0006733;oxidoreduction coenzyme metabolic process;0.0138672488226662!GO:0006509;membrane protein ectodomain proteolysis;0.0138761807575274!GO:0033619;membrane protein proteolysis;0.0138761807575274!GO:0004576;oligosaccharyl transferase activity;0.0141928935593076!GO:0000790;nuclear chromatin;0.0143936706475671!GO:0008250;oligosaccharyl transferase complex;0.0149369172305887!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0149651485893603!GO:0030119;AP-type membrane coat adaptor complex;0.0150048562628206!GO:0004532;exoribonuclease activity;0.0150724060780995!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0150724060780995!GO:0007050;cell cycle arrest;0.015229326857111!GO:0000209;protein polyubiquitination;0.0155393901492489!GO:0008234;cysteine-type peptidase activity;0.0156275321601742!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0156384076215781!GO:0001726;ruffle;0.0157352296763651!GO:0007033;vacuole organization and biogenesis;0.0157994698676745!GO:0000077;DNA damage checkpoint;0.0161388360143445!GO:0008180;signalosome;0.0164322811214668!GO:0030041;actin filament polymerization;0.0165011298554248!GO:0006607;NLS-bearing substrate import into nucleus;0.0168987744201742!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0169190818088627!GO:0005777;peroxisome;0.017029924920483!GO:0042579;microbody;0.017029924920483!GO:0030518;steroid hormone receptor signaling pathway;0.0173508857240693!GO:0032039;integrator complex;0.0174235520743455!GO:0006917;induction of apoptosis;0.0175769129812341!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0181152720440117!GO:0048487;beta-tubulin binding;0.0181927421159266!GO:0030134;ER to Golgi transport vesicle;0.0183336078896154!GO:0002084;protein depalmitoylation;0.0186091766211379!GO:0022411;cellular component disassembly;0.0186850859680871!GO:0006220;pyrimidine nucleotide metabolic process;0.0191325318096675!GO:0005680;anaphase-promoting complex;0.019622265654416!GO:0030133;transport vesicle;0.019622265654416!GO:0003923;GPI-anchor transamidase activity;0.0200371304442703!GO:0016255;attachment of GPI anchor to protein;0.0200371304442703!GO:0042765;GPI-anchor transamidase complex;0.0200371304442703!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0201878580224794!GO:0046112;nucleobase biosynthetic process;0.0204629856830913!GO:0005869;dynactin complex;0.0205696832172631!GO:0000287;magnesium ion binding;0.0206126211072045!GO:0009889;regulation of biosynthetic process;0.0207636419944491!GO:0000086;G2/M transition of mitotic cell cycle;0.0213313878243103!GO:0030131;clathrin adaptor complex;0.0214497828411085!GO:0043624;cellular protein complex disassembly;0.0215464421651862!GO:0008144;drug binding;0.0224053564646612!GO:0030127;COPII vesicle coat;0.0224876391972662!GO:0012507;ER to Golgi transport vesicle membrane;0.0224876391972662!GO:0006672;ceramide metabolic process;0.0224984970391804!GO:0007041;lysosomal transport;0.0224984970391804!GO:0012502;induction of programmed cell death;0.0225289688108165!GO:0046365;monosaccharide catabolic process;0.0229104012774129!GO:0004520;endodeoxyribonuclease activity;0.0234551555741239!GO:0003725;double-stranded RNA binding;0.0240702070008272!GO:0030125;clathrin vesicle coat;0.0247427034477877!GO:0030665;clathrin coated vesicle membrane;0.0247427034477877!GO:0006275;regulation of DNA replication;0.0247427034477877!GO:0009161;ribonucleoside monophosphate metabolic process;0.0248761709453919!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0248761709453919!GO:0030508;thiol-disulfide exchange intermediate activity;0.0250729015493834!GO:0005658;alpha DNA polymerase:primase complex;0.0251561978512597!GO:0016788;hydrolase activity, acting on ester bonds;0.0251706410470804!GO:0018196;peptidyl-asparagine modification;0.0251991101069479!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0251991101069479!GO:0016126;sterol biosynthetic process;0.0253027960781529!GO:0043524;negative regulation of neuron apoptosis;0.0255399468194623!GO:0035267;NuA4 histone acetyltransferase complex;0.0257823735100248!GO:0006730;one-carbon compound metabolic process;0.0263924494869558!GO:0031371;ubiquitin conjugating enzyme complex;0.0263990683422753!GO:0006266;DNA ligation;0.02680935581662!GO:0046982;protein heterodimerization activity;0.02680935581662!GO:0008538;proteasome activator activity;0.02680935581662!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0268169287695875!GO:0010257;NADH dehydrogenase complex assembly;0.0268169287695875!GO:0033108;mitochondrial respiratory chain complex assembly;0.0268169287695875!GO:0005996;monosaccharide metabolic process;0.0270342397299829!GO:0004523;ribonuclease H activity;0.0272522560021098!GO:0007004;telomere maintenance via telomerase;0.0273636128772812!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0276021844411708!GO:0016408;C-acyltransferase activity;0.0276209378417042!GO:0006596;polyamine biosynthetic process;0.0276264511842554!GO:0008637;apoptotic mitochondrial changes;0.0277003395592573!GO:0009303;rRNA transcription;0.0281648546844004!GO:0005784;translocon complex;0.0285648379614599!GO:0000793;condensed chromosome;0.0286724729063208!GO:0016570;histone modification;0.0288499764262066!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0289808483755607!GO:0043189;H4/H2A histone acetyltransferase complex;0.0295014695353035!GO:0008022;protein C-terminus binding;0.0296390659959104!GO:0019318;hexose metabolic process;0.0297032263704902!GO:0005663;DNA replication factor C complex;0.0300704073781543!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0304331647735183!GO:0008536;Ran GTPase binding;0.030913868829083!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0310321178940763!GO:0030433;ER-associated protein catabolic process;0.0312242026831147!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0312242026831147!GO:0006516;glycoprotein catabolic process;0.0315737688127485!GO:0051656;establishment of organelle localization;0.0316921083277187!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0320239460120463!GO:0046164;alcohol catabolic process;0.0320922815938254!GO:0004261;cathepsin G activity;0.0325462283361162!GO:0030132;clathrin coat of coated pit;0.03268473755537!GO:0000123;histone acetyltransferase complex;0.0327746753895926!GO:0050681;androgen receptor binding;0.0329230750365449!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0333951042216506!GO:0019320;hexose catabolic process;0.0334487785991963!GO:0045892;negative regulation of transcription, DNA-dependent;0.0336581643591006!GO:0019206;nucleoside kinase activity;0.0342094136747332!GO:0006301;postreplication repair;0.0350629470278708!GO:0043631;RNA polyadenylation;0.0351894369215638!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0360214474945607!GO:0012510;trans-Golgi network transport vesicle membrane;0.0360214474945607!GO:0044450;microtubule organizing center part;0.0361398661959585!GO:0003756;protein disulfide isomerase activity;0.0363921983285216!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0363921983285216!GO:0044438;microbody part;0.0366617433708204!GO:0044439;peroxisomal part;0.0366617433708204!GO:0004448;isocitrate dehydrogenase activity;0.0375044758723425!GO:0031647;regulation of protein stability;0.0383183948063806!GO:0016407;acetyltransferase activity;0.0386242746965211!GO:0006643;membrane lipid metabolic process;0.0386726877862376!GO:0008156;negative regulation of DNA replication;0.0392419451231441!GO:0030911;TPR domain binding;0.0401630251390339!GO:0019783;small conjugating protein-specific protease activity;0.0402341472988698!GO:0015036;disulfide oxidoreductase activity;0.040271246662725!GO:0006779;porphyrin biosynthetic process;0.040271246662725!GO:0033014;tetrapyrrole biosynthetic process;0.040271246662725!GO:0006458;'de novo' protein folding;0.0403903075784884!GO:0051084;'de novo' posttranslational protein folding;0.0403903075784884!GO:0000097;sulfur amino acid biosynthetic process;0.0404163587200499!GO:0006400;tRNA modification;0.0404840995748278!GO:0005975;carbohydrate metabolic process;0.0418784077208156!GO:0004721;phosphoprotein phosphatase activity;0.0423256145901576!GO:0031625;ubiquitin protein ligase binding;0.0423256145901576!GO:0006303;double-strand break repair via nonhomologous end joining;0.0423588278285699!GO:0004843;ubiquitin-specific protease activity;0.0427017167243556!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0430370040252945!GO:0046519;sphingoid metabolic process;0.0434811458590684!GO:0030036;actin cytoskeleton organization and biogenesis;0.0436229647423278!GO:0000119;mediator complex;0.0438442352744178!GO:0019377;glycolipid catabolic process;0.0443169428572066!GO:0046479;glycosphingolipid catabolic process;0.0443341825372988!GO:0016180;snRNA processing;0.0445485119142838!GO:0016073;snRNA metabolic process;0.0445485119142838!GO:0017166;vinculin binding;0.0445485119142838!GO:0015923;mannosidase activity;0.0445485119142838!GO:0006278;RNA-dependent DNA replication;0.0445485119142838!GO:0006695;cholesterol biosynthetic process;0.0447423241038605!GO:0042026;protein refolding;0.0448253641134125!GO:0048037;cofactor binding;0.0455638764935922!GO:0007096;regulation of exit from mitosis;0.0455638764935922!GO:0010458;exit from mitosis;0.0455638764935922!GO:0006740;NADPH regeneration;0.0457098638603957!GO:0006098;pentose-phosphate shunt;0.0457098638603957!GO:0006379;mRNA cleavage;0.0468364074672823!GO:0022406;membrane docking;0.0470403094364042!GO:0048278;vesicle docking;0.0470403094364042!GO:0031903;microbody membrane;0.0481646340374902!GO:0005778;peroxisomal membrane;0.0481646340374902!GO:0004659;prenyltransferase activity;0.0497831613183411
|sample_id=10400
|sample_note=machine failed, remainder reloaded, low amount
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=MYB:2.43481198124;E2F1..5:1.72879375763;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.48630102769;YY1:1.44084424573;NANOG:1.3793160003;NFY{A,B,C}:1.13259634578;NRF1:1.00330389517;ELF1,2,4:0.995537968108;DMAP1_NCOR{1,2}_SMARC:0.958015971078;FOXA2:0.949648249069;ELK1,4_GABP{A,B1}:0.949470254901;NR6A1:0.923397465491;PPARG:0.912407326694;SPIB:0.904205573025;STAT1,3:0.89275731707;CUX2:0.861423225238;SPI1:0.860284817925;POU5F1:0.841353283133;FOXP3:0.808804975761;NKX2-2,8:0.786203983355;CRX:0.780321610627;NFIL3:0.727680534828;PAX5:0.687179875423;RFX2..5_RFXANK_RFXAP:0.669047837818;ARID5B:0.628458860763;ZNF143:0.619876788142;PRRX1,2:0.586267343524;BREu{core}:0.575215497405;NKX3-2:0.561778004826;ETS1,2:0.557731499892;POU1F1:0.530785780462;NANOG{mouse}:0.515550076987;OCT4_SOX2{dimer}:0.488239481312;AIRE:0.421619388138;NR5A1,2:0.41322278795;GATA6:0.391512655064;HOX{A6,A7,B6,B7}:0.383266402089;TEF:0.346781214846;EN1,2:0.340725519968;HOX{A4,D4}:0.322659446078;HOX{A5,B5}:0.314453803713;ALX1:0.289362367156;CDX1,2,4:0.24865393318;CEBPA,B_DDIT3:0.229846256718;MYOD1:0.228405393985;POU2F1..3:0.204503659789;NKX2-3_NKX2-5:0.190366505027;HBP1_HMGB_SSRP1_UBTF:0.182229530088;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.172972575476;PAX8:0.166469396416;RXRA_VDR{dimer}:0.152329956125;GCM1,2:0.148988369424;HLF:0.136435721992;RUNX1..3:0.128767661529;GFI1:0.110115537841;HNF4A_NR2F1,2:0.108444507216;PRDM1:0.0953417428251;bHLH_family:0.0795230065256;AR:0.043308115137;NKX3-1:0.0270905276529;SOX{8,9,10}:0.0116607665357;DBP:-0.00105628980506;FOXN1:-0.00170432739049;KLF4:-0.0062411111519;PAX3,7:-0.0114899713883;SREBF1,2:-0.0222551634876;SRF:-0.0298802891082;ESRRA:-0.0458440792387;HNF1A:-0.0583561100279;STAT5{A,B}:-0.0702797052929;FOXQ1:-0.0748444490127;IRF1,2:-0.0778933965202;HAND1,2:-0.0845316256699;TFDP1:-0.0872055371437;IRF7:-0.0977912732027;TAL1_TCF{3,4,12}:-0.0996273249719;HES1:-0.10914250374;NFE2L2:-0.12866101238;MTF1:-0.153155134946;EP300:-0.158481905828;RORA:-0.1794746848;TGIF1:-0.191531996199;REST:-0.193874354363;SOX17:-0.196028491178;IKZF2:-0.20741699692;POU3F1..4:-0.212590567774;MEF2{A,B,C,D}:-0.218558791942;PBX1:-0.219040592649;NFE2L1:-0.226596795903;ZEB1:-0.234005427222;CREB1:-0.245430889035;VSX1,2:-0.255710219306;LEF1_TCF7_TCF7L1,2:-0.270538212581;ZFP161:-0.275988873742;PAX2:-0.279690406259;NKX2-1,4:-0.291398891084;GATA4:-0.295241991974;MYBL2:-0.29605757127;PITX1..3:-0.297855560785;SOX5:-0.317500804041;ATF5_CREB3:-0.324824909401;NFKB1_REL_RELA:-0.329650114095;ZNF238:-0.33193895245;POU6F1:-0.351333131672;FOXP1:-0.365847958522;RBPJ:-0.369717530823;ESR1:-0.376640873316;ZNF423:-0.397627800599;HIF1A:-0.404379147931;NFE2:-0.413129658604;PDX1:-0.425173416093;FOS_FOS{B,L1}_JUN{B,D}:-0.435241388834;TOPORS:-0.439115766823;FOSL2:-0.442513790472;FOX{F1,F2,J1}:-0.448817378938;HMGA1,2:-0.44952704847;TFAP2{A,C}:-0.452403930661;HSF1,2:-0.458353708027;TLX2:-0.466475118665;LMO2:-0.467817742037;AHR_ARNT_ARNT2:-0.478239145928;NR1H4:-0.497555691465;XBP1:-0.510281936413;PAX4:-0.51464806866;PAX6:-0.534323835394;FOXD3:-0.539798577028;MTE{core}:-0.54361523253;BACH2:-0.546904131577;RFX1:-0.55156460866;T:-0.563970255552;SNAI1..3:-0.575653658252;NHLH1,2:-0.594059343195;XCPE1{core}:-0.596242440343;TFAP4:-0.604801996298;TBX4,5:-0.608156670032;EVI1:-0.614165132425;LHX3,4:-0.630745763935;MZF1:-0.631871351754;ZNF148:-0.633116318428;SPZ1:-0.638836201282;MYFfamily:-0.639440299864;PAX1,9:-0.656750258537;ONECUT1,2:-0.675146316544;ATF4:-0.676394662342;ATF6:-0.682313663819;ATF2:-0.692099256158;ZBTB16:-0.693633434461;TBP:-0.697737343357;IKZF1:-0.698257880139;HOXA9_MEIS1:-0.700038041825;NKX6-1,2:-0.707490778661;ADNP_IRX_SIX_ZHX:-0.708831742161;GZF1:-0.717810346801;RXR{A,B,G}:-0.752077575954;FOXM1:-0.763270441666;GTF2I:-0.795509065664;UFEwm:-0.833947346656;NFIX:-0.88540937482;MED-1{core}:-0.891668395412;SOX2:-0.911904550119;ZBTB6:-0.918135901848;ZNF384:-0.929152936628;GTF2A1,2:-0.936282361781;TP53:-0.940819728954;NR3C1:-0.949570620092;SP1:-0.958125777406;FOXL1:-0.967318759732;HIC1:-0.977689804579;TEAD1:-0.999815021122;EGR1..3:-1.02299863976;MAFB:-1.03418599985;ZIC1..3:-1.05579760389;STAT2,4,6:-1.06161082622;TLX1..3_NFIC{dimer}:-1.07701758825;FOXO1,3,4:-1.08799080385;FOX{I1,J2}:-1.08993748505;EBF1:-1.09429985037;MAZ:-1.11714659045;TFAP2B:-1.11916094842;RREB1:-1.1268211775;PATZ1:-1.22766385297;HMX1:-1.23919660193;GLI1..3:-1.24082480676;TFCP2:-1.29112145887;NFATC1..3:-1.29216605485;GFI1B:-1.30547150329;JUN:-1.3446638255;CDC5L:-1.38639678317;BPTF:-1.40422757256;ALX4:-1.43159225749;SMAD1..7,9:-1.55715965489;FOX{D1,D2}:-1.61591336182
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10400-106A4;search_select_hide=table117:FF:10400-106A4
}}
}}

Latest revision as of 13:59, 3 June 2020

Name:acute myeloid leukemia (FAB M5) cell line:THP-1 (revived)
Species:Human (Homo sapiens)
Library ID:CNhs10723
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage1 year old child
sexmale
age1
cell typemonoblast
cell lineTHP-1
companyNA
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005601
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10723 CAGE DRX007814 DRR008686
Accession ID Hg19

Library idBAMCTSS
CNhs10723 DRZ000111 DRZ001496
Accession ID Hg38

Library idBAMCTSS
CNhs10723 DRZ011461 DRZ012846
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0787
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.675
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived1.031
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0651
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0879
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.204
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.264
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.3
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.466
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00225
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.47
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.223
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.128
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.161
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.161
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10723

Jaspar motifP-value
MA0002.20.0557
MA0003.10.963
MA0004.10.194
MA0006.10.206
MA0007.10.27
MA0009.10.0733
MA0014.10.263
MA0017.16.4021e-4
MA0018.20.0241
MA0019.10.703
MA0024.11.33281e-8
MA0025.10.0498
MA0027.10.693
MA0028.17.81878e-9
MA0029.10.991
MA0030.10.023
MA0031.10.0106
MA0035.20.68
MA0038.10.213
MA0039.20.943
MA0040.10.234
MA0041.10.209
MA0042.10.244
MA0043.10.155
MA0046.10.721
MA0047.20.2
MA0048.10.16
MA0050.10.258
MA0051.10.358
MA0052.10.333
MA0055.10.0203
MA0057.10.773
MA0058.10.104
MA0059.10.00506
MA0060.11.83804e-7
MA0061.10.731
MA0062.28.24032e-17
MA0065.20.0141
MA0066.10.409
MA0067.10.461
MA0068.10.991
MA0069.10.182
MA0070.10.962
MA0071.10.0714
MA0072.10.348
MA0073.10.545
MA0074.10.393
MA0076.11.61421e-9
MA0077.10.994
MA0078.10.426
MA0079.20.403
MA0080.25.53024e-13
MA0081.13.82984e-4
MA0083.10.684
MA0084.10.209
MA0087.10.269
MA0088.10.0121
MA0090.12.56957e-4
MA0091.10.584
MA0092.10.661
MA0093.10.155
MA0099.20.00132
MA0100.12.31297e-7
MA0101.10.392
MA0102.23.20903e-5
MA0103.10.766
MA0104.23.52088e-4
MA0105.10.246
MA0106.10.544
MA0107.10.0316
MA0108.24.64126e-7
MA0111.10.209
MA0112.20.197
MA0113.10.937
MA0114.10.00161
MA0115.10.0838
MA0116.14.58999e-4
MA0117.10.795
MA0119.10.594
MA0122.10.472
MA0124.10.332
MA0125.11
MA0131.10.0234
MA0135.10.687
MA0136.19.39201e-23
MA0137.20.845
MA0138.20.26
MA0139.10.436
MA0140.10.518
MA0141.10.132
MA0142.10.634
MA0143.10.659
MA0144.10.683
MA0145.10.882
MA0146.10.12
MA0147.11.87612e-4
MA0148.10.147
MA0149.10.524
MA0150.10.227
MA0152.10.725
MA0153.10.232
MA0154.10.372
MA0155.10.184
MA0156.11.44198e-19
MA0157.10.0273
MA0159.10.954
MA0160.10.173
MA0162.10.499
MA0163.11.29563e-9
MA0164.10.837
MA0258.10.0394
MA0259.10.0469



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10723

Novel motifP-value
10.0677
100.0245
1000.281
1010.399
1020.633
1030.182
1040.533
1050.817
1060.0318
1070.0735
1080.211
1090.0201
110.161
1100.272
1110.628
1120.682
1130.248
1140.539
1150.334
1160.87
1170.0653
1180.116
1190.782
120.724
1200.469
1210.763
1220.0708
1230.404
1240.287
1250.497
1260.437
1270.0458
1280.0793
1290.292
139.13312e-4
1300.262
1310.0167
1320.867
1330.438
1340.496
1350.227
1360.124
1370.353
1380.965
1390.669
140.812
1400.0446
1410.706
1420.553
1430.445
1440.787
1450.711
1460.806
1470.0927
1480.05
1490.0894
150.303
1500.741
1510.429
1520.0417
1530.764
1540.547
1550.204
1560.823
1570.64
1580.512
1590.43
160.828
1600.848
1610.0525
1620.625
1630.668
1640.503
1650.013
1660.382
1670.564
1680.904
1690.932
170.504
180.738
190.752
20.218
200.386
210.484
220.672
230.0104
240.0272
250.294
260.707
270.402
280.913
290.0233
30.0241
300.2
310.408
320.0807
330.502
340.718
350.651
360.0573
370.342
380.271
390.23
40.239
400.278
410.956
420.1
430.831
440.606
450.348
460.293
470.0603
480.0508
490.735
50.919
500.795
510.775
520.0907
530.656
540.609
550.717
560.609
570.307
580.204
590.562
60.491
600.454
610.199
620.409
630.984
640.311
650.577
660.00289
670.401
680.0883
690.623
70.0754
700.188
710.106
720.943
730.844
740.775
750.0524
760.184
770.65
780.0206
790.241
80.563
800.499
810.422
820.824
830.396
840.831
850.0324
860.67
870.0226
880.387
890.617
90.407
900.0502
910.0439
920.101
930.765
940.708
950.00312
960.764
970.614
980.685
990.33



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10723


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101370 (THP-1 cell sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0102332 (monocytic leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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