FF:10062-101H8: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005331 | |DRA_sample_Accession=CAGE@SAMD00005331 | ||
|accession_numbers=CAGE;DRX008732;DRR009604;DRZ001029;DRZ002414 | |accession_numbers=CAGE;DRX008732;DRR009604;DRZ001029;DRZ002414;DRZ012379;DRZ013764 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000945,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010039,UBERON:0010317,UBERON:0001555,UBERON:0005409,UBERON:0001041 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000945,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010039,UBERON:0010317,UBERON:0001555,UBERON:0005409,UBERON:0001041 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase= | |data_phase=2 | ||
|datafreeze_phase= | |datafreeze_phase=2 | ||
|def= | |def= | ||
|expression_enrichment_score=chr19:46801639..46801699,+!p1@HIF3A!2.33!211.07!HIF3A;;chr6:1312325..1312340,+!p1@FOXQ1!2.30!319.16!FOXQ1;;chr4:174451370..174451387,-!p1@HAND2!2.13!132.92!HAND2;;chr16:86544113..86544145,+!p1@FOXF1!2.00!120.51!FOXF1;;chr1:201979703..201979721,+!p2@ELF3!1.95!88.37!ELF3;;chr11:61520075..61520136,+!p1@C11orf9!1.94!176.01!C11orf9;;chr1:201979743..201979762,+!p1@ELF3!1.85!70.11!ELF3;;chr18:19749541..19749557,+!p1@GATA6!1.83!201.57!GATA6;;chr19:46800289..46800327,+!p2@HIF3A!1.76!56.24!HIF3A;;chr11:113930425..113930471,+!p1@ZBTB16!1.75!78.15!ZBTB16;;chr2:122042770..122042785,-!p1@TFCP2L1!1.75!55.51!TFCP2L1;;chr6:134210243..134210257,+!p1@TCF21!1.72!51.12!TCF21;;chr5:50679228..50679288,+!p1@ISL1!1.70!48.93!ISL1;;chr4:174451350..174451363,-!p3@HAND2!1.69!47.47!HAND2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.68!46.74!PEG3;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.67!46.01!ZBED1;;chr3:169381420..169381535,-!p1@MECOM!1.63!48.20!MECOM;;chr3:12330560..12330579,+!p1@PPARG!1.62!46.74!PPARG;;chr9:96717629..96717644,-!p1@BARX1!1.62!40.90!BARX1;;chr1:27240455..27240474,-!p1@NR0B2!1.57!35.79!NR0B2;;chr16:85932760..85932775,+!p1@IRF8!1.56!35.06!IRF8;;chr14:38064429..38064486,-!p1@FOXA1!1.53!32.87!FOXA1;;chr20:62680984..62680999,-!p1@SOX18!1.51!41.63!SOX18;;chr19:46367576..46367592,+!p1@FOXA3!1.51!31.40!FOXA3;;chr20:50179368..50179392,-!p2@NFATC2!1.47!36.52!NFATC2;;chr1:216896780..216896800,-!p2@ESRRG!1.47!28.48!ESRRG;;chr11:34642612..34642646,+!p1@EHF!1.46!27.75!EHF;;chr18:45663490..45663528,-!p2@ZBTB7C!1.45!27.02!ZBTB7C;;chr19:54041669..54041697,+!p2@ZNF331!1.44!26.29!ZNF331;;chr1:40105299..40105326,-!p1@HEYL!1.44!26.29!HEYL;;chr18:19749517..19749531,+!p3@GATA6!1.42!44.55!GATA6;;chr8:106330656..106330684,+!p1@ZFPM2!1.40!62.08!ZFPM2;;chr1:61548225..61548299,+!p1@NFIA!1.38!292.86!NFIA;;chr13:72441315..72441454,-!p1@DACH1!1.37!43.82!DACH1;;chr6:34524093..34524135,-!p1@SPDEF!1.33!20.45!SPDEF;;chr11:113930401..113930422,+!p3@ZBTB16!1.32!19.72!ZBTB16;;chr15:57511609..57511651,+!p2@TCF12!1.30!31.40!TCF12;;chr2:157189180..157189290,-!p1@NR4A2!1.29!93.48!NR4A2;;chr6:1389789..1389821,+!p1@FOXF2!1.29!25.56!FOXF2;;chr19:46806868..46806883,+!p3@HIF3A!1.28!18.26!HIF3A;;chr20:42984330..42984364,+!p2@HNF4A!1.28!18.26!HNF4A;;chr8:11561684..11561751,+!p1@GATA4!1.27!17.53!GATA4;;chr1:209979467..209979494,-!p1@IRF6!1.25!18.99!IRF6;;chr20:50159198..50159299,-!p1@NFATC2!1.24!24.10!NFATC2;;chr8:102504651..102504683,+!p1@GRHL2!1.23!16.07!GRHL2;;chr15:96873984..96873999,+!p3@NR2F2!1.22!112.47!NR2F2;;chr1:214161272..214161322,+!p1@PROX1!1.21!21.18!PROX1;;chr1:151804244..151804310,-!p1@RORC!1.21!15.34!RORC;;chr19:54058073..54058088,+!p1@ZNF331!1.19!14.61!ZNF331;;chr12:52445218..52445237,+!p1@NR4A1!1.18!176.74!NR4A1;;chr2:66662281..66662308,+!p1@MEIS1!1.17!47.47!MEIS1;;chr9:14314131..14314147,-!p2@NFIB!1.15!72.30!NFIB;;chr3:126076264..126076305,-!p2@KLF15!1.15!18.26!KLF15;;chr1:216896752..216896778,-!p1@ESRRG!1.15!13.15!ESRRG;;chr19:16435625..16435682,+!p1@KLF2!1.13!396.57!KLF2;;chrX:106960285..106960299,-!p1@TSC22D3!1.13!329.38!TSC22D3;;chr11:46299199..46299233,+!p1@CREB3L1!1.12!62.81!CREB3L1;;chr5:158526917..158526932,-!p1@EBF1!1.12!30.67!EBF1;;chrX:131623044..131623089,-!p1@MBNL3!1.11!49.66!MBNL3;;chr7:113726357..113726443,+!p1@FOXP2!1.11!20.45!FOXP2;;chr1:164528687..164528711,+!p6@PBX1!1.11!13.88!PBX1;;chr2:60780753..60780800,-!p1@BCL11A!1.10!57.70!BCL11A;;chr1:61547894..61547968,+!p2@NFIA!1.10!33.60!NFIA;;chr13:72441074..72441172,-!p2@DACH1!1.10!11.69!DACH1;;chr7:27192185..27192209,-!p1@HOXA3!1.10!11.69!HOXA3;;chr2:43453734..43453751,-!p1@ZFP36L2!1.09!1187.53!ZFP36L2;;chr18:19749386..19749404,+!p2@GATA6!1.09!16.07!GATA6;;chr2:19558373..19558392,-!p1@OSR1!1.08!30.67!OSR1;;chr3:69915385..69915438,+!p3@MITF!1.08!10.96!MITF;;chr8:25902876..25902936,-!p1@EBF2!1.08!10.96!EBF2;;chr20:22564895..22564910,-!p1@FOXA2!1.08!10.96!FOXA2;;chr8:60031682..60031710,-!p2@TOX!1.07!17.53!TOX;;chr8:60031619..60031676,-!p1@TOX!1.06!22.64!TOX;;chr15:37390850..37390909,-!p3@MEIS2!1.05!20.45!MEIS2;;chr1:10856639..10856662,-!p2@CASZ1!1.05!10.22!CASZ1;;chr4:174450089..174450153,-!p2@HAND2!1.05!10.22!HAND2;;chr5:134369905..134369972,-!p1@PITX1!1.04!15.34!PITX1;;chr3:42947600..42947680,+!p1@ZNF662!1.04!14.61!ZNF662;;chr15:96873921..96873946,+!p1@NR2F2!1.03!275.34!NR2F2;;chr6:144329384..144329405,-!p1@PLAGL1!1.02!111.01!PLAGL1;;chr3:24536253..24536328,-!p1@THRB!1.02!18.26!THRB;;chr8:55370487..55370503,+!p1@SOX17!1.02!9.49!SOX17;;chr3:12329397..12329433,+!p2@PPARG!1.01!21.18!PPARG;;chr3:126076242..126076257,-!p1@KLF15!1.01!11.69!KLF15;;chr4:38665810..38665827,+!p1@KLF3!1.00!134.38!KLF3;;chr6:91006575..91006602,-!p2@BACH2!0.99!13.15!BACH2;;chr22:38380543..38380569,-!p1@SOX10!0.99!8.76!SOX10;;chr1:209979411..209979433,-!p2@IRF6!0.99!8.76!IRF6;;chr13:73633131..73633149,+!p1@KLF5!0.98!94.21!KLF5;;chr14:33408072..33408114,+!p2@NPAS3!0.98!10.22!NPAS3;;chr16:79634624..79634642,-!p1@MAF!0.96!32.87!MAF;;chr17:1959369..1959388,+!p2@HIC1!0.96!21.91!HIC1;;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| |expression_enrichment_score=chr19:46801639..46801699,+!p1@HIF3A!2.33!211.07!HIF3A;;chr6:1312325..1312340,+!p1@FOXQ1!2.30!319.16!FOXQ1;;chr4:174451370..174451387,-!p1@HAND2!2.13!132.92!HAND2;;chr16:86544113..86544145,+!p1@FOXF1!2.00!120.51!FOXF1;;chr1:201979703..201979721,+!p2@ELF3!1.95!88.37!ELF3;;chr11:61520075..61520136,+!p1@C11orf9!1.94!176.01!C11orf9;;chr1:201979743..201979762,+!p1@ELF3!1.85!70.11!ELF3;;chr18:19749541..19749557,+!p1@GATA6!1.83!201.57!GATA6;;chr19:46800289..46800327,+!p2@HIF3A!1.76!56.24!HIF3A;;chr11:113930425..113930471,+!p1@ZBTB16!1.75!78.15!ZBTB16;;chr2:122042770..122042785,-!p1@TFCP2L1!1.75!55.51!TFCP2L1;;chr6:134210243..134210257,+!p1@TCF21!1.72!51.12!TCF21;;chr5:50679228..50679288,+!p1@ISL1!1.70!48.93!ISL1;;chr4:174451350..174451363,-!p3@HAND2!1.69!47.47!HAND2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.68!46.74!PEG3;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.67!46.01!ZBED1;;chr3:169381420..169381535,-!p1@MECOM!1.63!48.20!MECOM;;chr3:12330560..12330579,+!p1@PPARG!1.62!46.74!PPARG;;chr9:96717629..96717644,-!p1@BARX1!1.62!40.90!BARX1;;chr1:27240455..27240474,-!p1@NR0B2!1.57!35.79!NR0B2;;chr16:85932760..85932775,+!p1@IRF8!1.56!35.06!IRF8;;chr14:38064429..38064486,-!p1@FOXA1!1.53!32.87!FOXA1;;chr20:62680984..62680999,-!p1@SOX18!1.51!41.63!SOX18;;chr19:46367576..46367592,+!p1@FOXA3!1.51!31.40!FOXA3;;chr20:50179368..50179392,-!p2@NFATC2!1.47!36.52!NFATC2;;chr1:216896780..216896800,-!p2@ESRRG!1.47!28.48!ESRRG;;chr11:34642612..34642646,+!p1@EHF!1.46!27.75!EHF;;chr18:45663490..45663528,-!p2@ZBTB7C!1.45!27.02!ZBTB7C;;chr19:54041669..54041697,+!p2@ZNF331!1.44!26.29!ZNF331;;chr1:40105299..40105326,-!p1@HEYL!1.44!26.29!HEYL;;chr18:19749517..19749531,+!p3@GATA6!1.42!44.55!GATA6;;chr8:106330656..106330684,+!p1@ZFPM2!1.40!62.08!ZFPM2;;chr1:61548225..61548299,+!p1@NFIA!1.38!292.86!NFIA;;chr13:72441315..72441454,-!p1@DACH1!1.37!43.82!DACH1;;chr6:34524093..34524135,-!p1@SPDEF!1.33!20.45!SPDEF;;chr11:113930401..113930422,+!p3@ZBTB16!1.32!19.72!ZBTB16;;chr15:57511609..57511651,+!p2@TCF12!1.30!31.40!TCF12;;chr2:157189180..157189290,-!p1@NR4A2!1.29!93.48!NR4A2;;chr6:1389789..1389821,+!p1@FOXF2!1.29!25.56!FOXF2;;chr19:46806868..46806883,+!p3@HIF3A!1.28!18.26!HIF3A;;chr20:42984330..42984364,+!p2@HNF4A!1.28!18.26!HNF4A;;chr8:11561684..11561751,+!p1@GATA4!1.27!17.53!GATA4;;chr1:209979467..209979494,-!p1@IRF6!1.25!18.99!IRF6;;chr20:50159198..50159299,-!p1@NFATC2!1.24!24.10!NFATC2;;chr8:102504651..102504683,+!p1@GRHL2!1.23!16.07!GRHL2;;chr15:96873984..96873999,+!p3@NR2F2!1.22!112.47!NR2F2;;chr1:214161272..214161322,+!p1@PROX1!1.21!21.18!PROX1;;chr1:151804244..151804310,-!p1@RORC!1.21!15.34!RORC;;chr19:54058073..54058088,+!p1@ZNF331!1.19!14.61!ZNF331;;chr12:52445218..52445237,+!p1@NR4A1!1.18!176.74!NR4A1;;chr2:66662281..66662308,+!p1@MEIS1!1.17!47.47!MEIS1;;chr9:14314131..14314147,-!p2@NFIB!1.15!72.30!NFIB;;chr3:126076264..126076305,-!p2@KLF15!1.15!18.26!KLF15;;chr1:216896752..216896778,-!p1@ESRRG!1.15!13.15!ESRRG;;chr19:16435625..16435682,+!p1@KLF2!1.13!396.57!KLF2;;chrX:106960285..106960299,-!p1@TSC22D3!1.13!329.38!TSC22D3;;chr11:46299199..46299233,+!p1@CREB3L1!1.12!62.81!CREB3L1;;chr5:158526917..158526932,-!p1@EBF1!1.12!30.67!EBF1;;chrX:131623044..131623089,-!p1@MBNL3!1.11!49.66!MBNL3;;chr7:113726357..113726443,+!p1@FOXP2!1.11!20.45!FOXP2;;chr1:164528687..164528711,+!p6@PBX1!1.11!13.88!PBX1;;chr2:60780753..60780800,-!p1@BCL11A!1.10!57.70!BCL11A;;chr1:61547894..61547968,+!p2@NFIA!1.10!33.60!NFIA;;chr13:72441074..72441172,-!p2@DACH1!1.10!11.69!DACH1;;chr7:27192185..27192209,-!p1@HOXA3!1.10!11.69!HOXA3;;chr2:43453734..43453751,-!p1@ZFP36L2!1.09!1187.53!ZFP36L2;;chr18:19749386..19749404,+!p2@GATA6!1.09!16.07!GATA6;;chr2:19558373..19558392,-!p1@OSR1!1.08!30.67!OSR1;;chr3:69915385..69915438,+!p3@MITF!1.08!10.96!MITF;;chr8:25902876..25902936,-!p1@EBF2!1.08!10.96!EBF2;;chr20:22564895..22564910,-!p1@FOXA2!1.08!10.96!FOXA2;;chr8:60031682..60031710,-!p2@TOX!1.07!17.53!TOX;;chr8:60031619..60031676,-!p1@TOX!1.06!22.64!TOX;;chr15:37390850..37390909,-!p3@MEIS2!1.05!20.45!MEIS2;;chr1:10856639..10856662,-!p2@CASZ1!1.05!10.22!CASZ1;;chr4:174450089..174450153,-!p2@HAND2!1.05!10.22!HAND2;;chr5:134369905..134369972,-!p1@PITX1!1.04!15.34!PITX1;;chr3:42947600..42947680,+!p1@ZNF662!1.04!14.61!ZNF662;;chr15:96873921..96873946,+!p1@NR2F2!1.03!275.34!NR2F2;;chr6:144329384..144329405,-!p1@PLAGL1!1.02!111.01!PLAGL1;;chr3:24536253..24536328,-!p1@THRB!1.02!18.26!THRB;;chr8:55370487..55370503,+!p1@SOX17!1.02!9.49!SOX17;;chr3:12329397..12329433,+!p2@PPARG!1.01!21.18!PPARG;;chr3:126076242..126076257,-!p1@KLF15!1.01!11.69!KLF15;;chr4:38665810..38665827,+!p1@KLF3!1.00!134.38!KLF3;;chr6:91006575..91006602,-!p2@BACH2!0.99!13.15!BACH2;;chr22:38380543..38380569,-!p1@SOX10!0.99!8.76!SOX10;;chr1:209979411..209979433,-!p2@IRF6!0.99!8.76!IRF6;;chr13:73633131..73633149,+!p1@KLF5!0.98!94.21!KLF5;;chr14:33408072..33408114,+!p2@NPAS3!0.98!10.22!NPAS3;;chr16:79634624..79634642,-!p1@MAF!0.96!32.87!MAF;;chr17:1959369..1959388,+!p2@HIC1!0.96!21.91!HIC1;;chr5:2751762..2751784,-!p1@IRX2!0.96!8.03!IRX2;;chr20:22565370..22565388,-!p2@FOXA2!0.96!8.03!FOXA2;;chr20:61051039..61051057,-!p1@GATA5!0.96!8.03!GATA5;;chr20:42543441..42543497,+!p1@TOX2!0.95!36.52!TOX2;;chr2:28615716..28615733,+!p1@FOSL2!0.94!381.24!FOSL2;;chr1:164528616..164528660,+!p5@PBX1!0.94!16.07!PBX1;;chr11:46299539..46299620,+!p2@CREB3L1!0.94!13.15!CREB3L1;;chr9:110251836..110251887,-!p4@KLF4!0.94!10.22!KLF4;;chr18:53068911..53068935,-!p4@TCF4!0.94!8.76!TCF4;;chr11:113930291..113930339,+!p2@ZBTB16!0.93!12.42!ZBTB16;;chr17:53342311..53342400,+!p1@HLF!0.93!8.76!HLF;;chr3:18466787..18466839,-!p1@SATB1!0.92!34.33!SATB1;;chr15:57210961..57211012,+!p3@TCF12!0.92!24.10!TCF12;;chr8:60031762..60031803,-!p3@TOX!0.92!10.96!TOX;;chr5:137804405..137804444,+!p3@EGR1!0.92!8.76!EGR1;;chr5:134369879..134369898,-!p2@PITX1!0.92!7.30!PITX1;;chr3:168864831..168864851,-!p9@MECOM!0.92!7.30!MECOM;;chr10:131762504..131762555,-!p1@EBF3!0.92!7.30!EBF3;;chr1:154975229..154975247,+!p6@ZBTB7B!0.92!7.30!ZBTB7B;;chr20:18038521..18038571,-!p1@OVOL2!0.92!7.30!OVOL2;;chr21:39870339..39870443,-!p1@ERG!0.92!7.30!ERG;;chr10:114710098..114710130,+!p2@TCF7L2!0.91!55.51!TCF7L2;;chr15:96874012..96874042,+!p2@NR2F2!0.89!64.27!NR2F2;;chr20:2673383..2673441,+!p1@EBF4!0.89!10.96!EBF4;;chrX:107018969..107019024,-!p6@TSC22D3!0.89!9.49!TSC22D3;;chr8:48650715..48650735,-!p1@CEBPD!0.88!876.40!CEBPD;;chr9:73028814..73028895,-!p1@KLF9!0.88!68.65!KLF9;;chrX:106960180..106960197,-!p2@TSC22D3!0.88!26.29!TSC22D3;;chr17:38256799..38256815,-!p3@NR1D1!0.88!12.42!NR1D1;;chr3:21792585..21792625,-!p2@ZNF385D!0.88!7.30!ZNF385D;;chr3:168865250..168865272,-!p5@MECOM!0.88!6.57!MECOM;;chr6:117198400..117198441,+!p1@RFX6!0.88!6.57!RFX6;;chr7:15726296..15726315,-!p1@MEOX2!0.88!6.57!MEOX2;;chr8:76319876..76319926,+!p1@HNF4G!0.88!6.57!HNF4G;;chr1:10856665..10856683,-!p4@CASZ1!0.88!6.57!CASZ1;;chr1:209979449..209979460,-!p3@IRF6!0.88!6.57!IRF6;;chr20:20348740..20348757,+!p1@INSM1!0.88!6.57!INSM1;;chr11:113930355..113930366,+!p5@ZBTB16!0.88!6.57!ZBTB16;;chr11:71955210..71955227,-!p1@PHOX2A!0.88!6.57!PHOX2A;;chr18:19749504..19749515,+!p5@GATA6!0.88!6.57!GATA6;;chr9:16870659..16870675,-!p2@BNC2!0.87!8.03!BNC2;;chr8:60031809..60031835,-!p4@TOX!0.86!8.03!TOX;;chr18:6414884..6414942,-!p1@L3MBTL4!0.86!8.03!L3MBTL4;;chr10:114709999..114710031,+!p1@TCF7L2!0.85!154.83!TCF7L2;;chr4:38665866..38665878,+!p4@KLF3!0.85!20.45!KLF3;;chr19:58220517..58220583,-!p1@ZNF154!0.85!20.45!ZNF154;;chr2:10183651..10183713,+!p1@KLF11!0.84!46.01!KLF11;;chr3:12329358..12329393,+!p3@PPARG!0.84!15.34!PPARG;;chr19:58326246..58326262,-!p2@ZNF552!0.84!14.61!ZNF552;;chr20:51588873..51588953,+!p1@TSHZ2!0.84!8.03!TSHZ2;;chr7:127032262..127032294,-!p5@ZNF800!0.84!7.30!ZNF800;;chr7:50343634..50343717,+!p2@IKZF1!0.84!5.84!IKZF1;;chr16:52581025..52581072,-!p1@TOX3!0.84!5.84!TOX3;;chr6:41514078..41514158,+!p1@FOXP4!0.83!55.51!FOXP4;;chr6:168227552..168227609,+!p1@MLLT4!0.83!50.39!MLLT4;;chr16:79633894..79633954,-!p3@MAF!0.83!11.69!MAF;;chr2:145277882..145277967,-!p3@ZEB2!0.83!10.22!ZEB2;;chr4:38665883..38665922,+!p3@KLF3!0.82!22.64!KLF3;;chr2:145277640..145277771,-!p1@ZEB2!0.81!78.88!ZEB2;;chr5:88178983..88179012,-!p1@MEF2C!0.81!45.28!MEF2C;;chr19:33793430..33793447,-!p1@CEBPA!0.81!24.83!CEBPA;;chr15:42749722..42749739,-!p2@ZFP106!0.81!10.22!ZFP106;;chr9:14314106..14314119,-!p5@NFIB!0.81!10.22!NFIB;;chr1:8483723..8483752,-!p12@RERE!0.81!8.76!RERE;;chr14:75745523..75745537,+!p1@FOS!0.80!686.52!FOS;;chr4:87928413..87928433,+!p3@AFF1!0.80!35.79!AFF1;;chrX:84499081..84499115,+!p2@ZNF711!0.80!8.03!ZNF711;;chrX:84498989..84499003,+!p1@ZNF711!0.79!7.30!ZNF711;;chr15:76629123..76629151,+!p1@ISL2!0.79!5.84!ISL2;;chr19:1753498..1753519,+!p1@ONECUT3!0.79!5.11!ONECUT3;;chr20:51589133..51589159,+!p2@TSHZ2!0.79!5.11!TSHZ2;;chr6:1389824..1389840,+!p3@FOXF2!0.79!5.11!FOXF2;;chr6:34524049..34524089,-!p2@SPDEF!0.79!5.11!SPDEF;;chr6:391743..391759,+!p1@IRF4!0.79!5.11!IRF4;;chr7:27183114..27183138,-!p3@HOXA5!0.79!5.11!HOXA5;;chr11:47400078..47400106,-!p1@SPI1!0.79!5.11!SPI1;;chr13:37494275..37494304,-!p2@SMAD9!0.79!5.11!SMAD9;;chr9:124991204..124991246,-!p1@LHX6!0.79!5.11!LHX6;;chr2:19558327..19558334,-!p2@OSR1!0.79!5.11!OSR1;;chr3:114819073..114819100,-!p10@ZBTB20!0.79!5.11!ZBTB20;;chr3:168865364..168865376,-!p11@MECOM!0.79!5.11!MECOM;;chr4:149363475..149363492,-!p2@NR3C2!0.79!5.11!NR3C2;;chr4:26322673..26322684,+!p11@RBPJ!0.79!5.11!RBPJ;;chr1:8763296..8763339,-!p9@RERE!0.78!13.15!RERE;;chr6:91006518..91006570,-!p1@BACH2!0.78!12.42!BACH2;;chr19:16435523..16435619,+!p2@KLF2!0.78!7.30!KLF2;;chr2:169312725..169312810,+!p1@CERS6!0.77!130.00!CERS6;;chr6:19837592..19837621,+!p1@ID4!0.77!32.87!ID4;;chr1:8483756..8483809,-!p5@RERE!0.77!14.61!RERE;;chrX:106960221..106960236,-!p3@TSC22D3!0.77!14.61!TSC22D3;;chr6:106534230..106534254,+!p2@PRDM1!0.77!13.15!PRDM1;;chr17:7492684..7492778,-!p2@SOX15!0.77!10.96!SOX15;;chr10:114710060..114710069,+!p5@TCF7L2!0.77!8.76!TCF7L2;;chr5:88179195..88179224,-!p3@MEF2C!0.77!8.03!MEF2C;;chr6:41514178..41514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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005409 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0010316 | |ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0010316 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 41: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/stomach%252c%2520fetal%252c%2520donor1.CNhs11771.10062-101H8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/stomach%252c%2520fetal%252c%2520donor1.CNhs11771.10062-101H8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/stomach%252c%2520fetal%252c%2520donor1.CNhs11771.10062-101H8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/stomach%252c%2520fetal%252c%2520donor1.CNhs11771.10062-101H8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/stomach%252c%2520fetal%252c%2520donor1.CNhs11771.10062-101H8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10062-101H8 | |id=FF:10062-101H8 | ||
|is_a=EFO:0002091;;FF:0010062 | |is_a=EFO:0002091;;FF:0010062 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11771 | |library_id=CNhs11771 | ||
|library_id_phase_based= | |library_id_phase_based=2:CNhs11771 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10062 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10062 | |||
|name=stomach, fetal, donor1 | |name=stomach, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 51: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11771,LSID820,release009,COMPLETED | |profile_hcage=CNhs11771,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 90: | Line 101: | ||
|top_motifs=MYBL2:2.73849795374;DBP:2.38623523693;FOX{F1,F2,J1}:2.33468603542;T:2.25284425666;TFAP2{A,C}:2.18210176828;HIC1:2.18141480669;MED-1{core}:2.08962897935;MTE{core}:2.0340927454;EGR1..3:1.98918770932;GATA6:1.96492213348;TOPORS:1.95122871618;TFAP2B:1.91384868466;NR3C1:1.8703314305;MAZ:1.81982264041;HOX{A6,A7,B6,B7}:1.81206894545;HNF1A:1.77980475167;SRF:1.74808734561;MTF1:1.69779418917;TBP:1.63677068723;FOX{D1,D2}:1.61248358619;FOXA2:1.60213860523;BREu{core}:1.54667533556;SP1:1.48667542612;GLI1..3:1.48571368477;FOXL1:1.4332052054;XCPE1{core}:1.35955811951;SNAI1..3:1.31891629359;NKX2-3_NKX2-5:1.30536281301;TFCP2:1.29712562489;PATZ1:1.26588944786;MYFfamily:1.20394142643;PAX6:1.15727095732;FOXP1:1.1202088054;SPZ1:1.1006699292;HNF4A_NR2F1,2:1.10024113881;ATF6:1.05500134781;NR5A1,2:1.05187793533;PITX1..3:1.01991640763;NKX2-1,4:1.01300382873;MZF1:1.00628580798;ZNF148:0.991272148785;AR:0.976390738493;TFAP4:0.968677921371;ZEB1:0.941799135607;IKZF2:0.872526957987;LMO2:0.858215128336;CDC5L:0.816469945669;GTF2I:0.814035786038;HMGA1,2:0.810885993855;TLX1..3_NFIC{dimer}:0.805906723697;POU5F1:0.803447309453;NKX3-1:0.794909200309;RBPJ:0.77867985479;RREB1:0.772513141489;NFATC1..3:0.770632960258;ADNP_IRX_SIX_ZHX:0.730927654383;PRDM1:0.727663403704;TGIF1:0.707677425411;GTF2A1,2:0.688926658907;FOXM1:0.659711483865;SOX17:0.651825245751;POU6F1:0.633594347754;NANOG:0.60894792223;ESR1:0.600768295358;NR6A1:0.593101991204;SOX5:0.573754230683;MEF2{A,B,C,D}:0.572105255018;GFI1B:0.557581855297;ATF2:0.55757741004;PAX5:0.553137365622;VSX1,2:0.539815995181;TEAD1:0.524270739161;FOXD3:0.508205735095;ZFP161:0.476482479175;TFDP1:0.471347887083;JUN:0.457691725492;IKZF1:0.427176760541;ZNF238:0.415164442112;STAT1,3:0.368124009293;ZBTB16:0.2999193463;SOX2:0.278299347342;TLX2:0.257794350242;STAT2,4,6:0.256583474708;EP300:0.249764730568;FOXN1:0.245048761784;FOXO1,3,4:0.242508065528;XBP1:0.212278184774;GZF1:0.210038648559;TBX4,5:0.183224264084;BPTF:0.165299210941;CUX2:0.155556521933;REST:0.153223715364;TAL1_TCF{3,4,12}:0.128821664862;GFI1:0.123884360872;ESRRA:0.121328665033;HAND1,2:0.118376404209;ATF5_CREB3:0.114339286151;AIRE:0.111199201795;IRF7:0.105084636419;ATF4:0.104571871401;PRRX1,2:0.0870232942107;HMX1:0.0425851326618;FOSL2:0.04169734045;NHLH1,2:0.0230900960323;PAX3,7:0.0229057997701;HIF1A:0.0205240148669;TEF:0.0198874398441;ZNF384:0.0157900696277;GATA4:0.0153874118797;LHX3,4:0.0147159700449;ETS1,2:0.0129527726242;SMAD1..7,9:0.00573668754351;POU2F1..3:0.00358362376827;ZNF423:-0.0268231494219;PBX1:-0.0332667204887;HOX{A5,B5}:-0.0353431072274;FOX{I1,J2}:-0.0383794752339;KLF4:-0.0429524395846;RXR{A,B,G}:-0.0448990297803;RFX2..5_RFXANK_RFXAP:-0.0743078711708;NR1H4:-0.0758413266756;DMAP1_NCOR{1,2}_SMARC:-0.0766134451036;RXRA_VDR{dimer}:-0.08517243979;SOX{8,9,10}:-0.0904562354376;MAFB:-0.0994225923127;RORA:-0.111815604318;IRF1,2:-0.140238999725;ZBTB6:-0.153899685988;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.169394640811;NFIL3:-0.175163279258;ALX1:-0.197507982263;LEF1_TCF7_TCF7L1,2:-0.227819257502;SPIB:-0.246791618306;bHLH_family:-0.294216548026;EBF1:-0.298226456271;MYOD1:-0.304103717929;GCM1,2:-0.30489598833;HBP1_HMGB_SSRP1_UBTF:-0.306192406636;RUNX1..3:-0.315285341459;CEBPA,B_DDIT3:-0.324165949532;FOS_FOS{B,L1}_JUN{B,D}:-0.331188340018;CREB1:-0.362665940721;STAT5{A,B}:-0.369732990621;SPI1:-0.371479624958;E2F1..5:-0.384654300001;NFKB1_REL_RELA:-0.42569729629;AHR_ARNT_ARNT2:-0.457572096098;NKX3-2:-0.47884764396;NFY{A,B,C}:-0.50419127092;POU3F1..4:-0.511719270247;RFX1:-0.513865712844;NFE2:-0.527481173686;ZNF143:-0.527667126491;BACH2:-0.528064723029;PAX2:-0.569326131814;HLF:-0.586142028752;FOXP3:-0.587084863295;PAX8:-0.594180954633;HES1:-0.60385099911;TP53:-0.61031721813;ELF1,2,4:-0.635737886664;SREBF1,2:-0.646625661678;OCT4_SOX2{dimer}:-0.653879740094;ONECUT1,2:-0.685520206407;NANOG{mouse}:-0.69050501446;FOXQ1:-0.725509383924;NRF1:-0.82082642113;EVI1:-0.875130784366;ARID5B:-0.877965388913;ZIC1..3:-0.879366829223;UFEwm:-0.896581920419;HOX{A4,D4}:-0.930364402834;PAX1,9:-0.945105944459;NFIX:-0.945661730825;POU1F1:-0.966222894531;NFE2L2:-1.01392544214;CDX1,2,4:-1.03793648756;ELK1,4_GABP{A,B1}:-1.08370648609;PDX1:-1.09106634446;ALX4:-1.09815892531;NKX2-2,8:-1.146350834;HSF1,2:-1.1719960896;NKX6-1,2:-1.22895542946;YY1:-1.23467798213;CRX:-1.28480558461;PPARG:-1.29570903633;EN1,2:-1.35642719709;MYB:-1.40299928542;HOXA9_MEIS1:-1.62665351512;PAX4:-1.79005844064;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.96280864806;NFE2L1:-2.10103319973 | |top_motifs=MYBL2:2.73849795374;DBP:2.38623523693;FOX{F1,F2,J1}:2.33468603542;T:2.25284425666;TFAP2{A,C}:2.18210176828;HIC1:2.18141480669;MED-1{core}:2.08962897935;MTE{core}:2.0340927454;EGR1..3:1.98918770932;GATA6:1.96492213348;TOPORS:1.95122871618;TFAP2B:1.91384868466;NR3C1:1.8703314305;MAZ:1.81982264041;HOX{A6,A7,B6,B7}:1.81206894545;HNF1A:1.77980475167;SRF:1.74808734561;MTF1:1.69779418917;TBP:1.63677068723;FOX{D1,D2}:1.61248358619;FOXA2:1.60213860523;BREu{core}:1.54667533556;SP1:1.48667542612;GLI1..3:1.48571368477;FOXL1:1.4332052054;XCPE1{core}:1.35955811951;SNAI1..3:1.31891629359;NKX2-3_NKX2-5:1.30536281301;TFCP2:1.29712562489;PATZ1:1.26588944786;MYFfamily:1.20394142643;PAX6:1.15727095732;FOXP1:1.1202088054;SPZ1:1.1006699292;HNF4A_NR2F1,2:1.10024113881;ATF6:1.05500134781;NR5A1,2:1.05187793533;PITX1..3:1.01991640763;NKX2-1,4:1.01300382873;MZF1:1.00628580798;ZNF148:0.991272148785;AR:0.976390738493;TFAP4:0.968677921371;ZEB1:0.941799135607;IKZF2:0.872526957987;LMO2:0.858215128336;CDC5L:0.816469945669;GTF2I:0.814035786038;HMGA1,2:0.810885993855;TLX1..3_NFIC{dimer}:0.805906723697;POU5F1:0.803447309453;NKX3-1:0.794909200309;RBPJ:0.77867985479;RREB1:0.772513141489;NFATC1..3:0.770632960258;ADNP_IRX_SIX_ZHX:0.730927654383;PRDM1:0.727663403704;TGIF1:0.707677425411;GTF2A1,2:0.688926658907;FOXM1:0.659711483865;SOX17:0.651825245751;POU6F1:0.633594347754;NANOG:0.60894792223;ESR1:0.600768295358;NR6A1:0.593101991204;SOX5:0.573754230683;MEF2{A,B,C,D}:0.572105255018;GFI1B:0.557581855297;ATF2:0.55757741004;PAX5:0.553137365622;VSX1,2:0.539815995181;TEAD1:0.524270739161;FOXD3:0.508205735095;ZFP161:0.476482479175;TFDP1:0.471347887083;JUN:0.457691725492;IKZF1:0.427176760541;ZNF238:0.415164442112;STAT1,3:0.368124009293;ZBTB16:0.2999193463;SOX2:0.278299347342;TLX2:0.257794350242;STAT2,4,6:0.256583474708;EP300:0.249764730568;FOXN1:0.245048761784;FOXO1,3,4:0.242508065528;XBP1:0.212278184774;GZF1:0.210038648559;TBX4,5:0.183224264084;BPTF:0.165299210941;CUX2:0.155556521933;REST:0.153223715364;TAL1_TCF{3,4,12}:0.128821664862;GFI1:0.123884360872;ESRRA:0.121328665033;HAND1,2:0.118376404209;ATF5_CREB3:0.114339286151;AIRE:0.111199201795;IRF7:0.105084636419;ATF4:0.104571871401;PRRX1,2:0.0870232942107;HMX1:0.0425851326618;FOSL2:0.04169734045;NHLH1,2:0.0230900960323;PAX3,7:0.0229057997701;HIF1A:0.0205240148669;TEF:0.0198874398441;ZNF384:0.0157900696277;GATA4:0.0153874118797;LHX3,4:0.0147159700449;ETS1,2:0.0129527726242;SMAD1..7,9:0.00573668754351;POU2F1..3:0.00358362376827;ZNF423:-0.0268231494219;PBX1:-0.0332667204887;HOX{A5,B5}:-0.0353431072274;FOX{I1,J2}:-0.0383794752339;KLF4:-0.0429524395846;RXR{A,B,G}:-0.0448990297803;RFX2..5_RFXANK_RFXAP:-0.0743078711708;NR1H4:-0.0758413266756;DMAP1_NCOR{1,2}_SMARC:-0.0766134451036;RXRA_VDR{dimer}:-0.08517243979;SOX{8,9,10}:-0.0904562354376;MAFB:-0.0994225923127;RORA:-0.111815604318;IRF1,2:-0.140238999725;ZBTB6:-0.153899685988;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.169394640811;NFIL3:-0.175163279258;ALX1:-0.197507982263;LEF1_TCF7_TCF7L1,2:-0.227819257502;SPIB:-0.246791618306;bHLH_family:-0.294216548026;EBF1:-0.298226456271;MYOD1:-0.304103717929;GCM1,2:-0.30489598833;HBP1_HMGB_SSRP1_UBTF:-0.306192406636;RUNX1..3:-0.315285341459;CEBPA,B_DDIT3:-0.324165949532;FOS_FOS{B,L1}_JUN{B,D}:-0.331188340018;CREB1:-0.362665940721;STAT5{A,B}:-0.369732990621;SPI1:-0.371479624958;E2F1..5:-0.384654300001;NFKB1_REL_RELA:-0.42569729629;AHR_ARNT_ARNT2:-0.457572096098;NKX3-2:-0.47884764396;NFY{A,B,C}:-0.50419127092;POU3F1..4:-0.511719270247;RFX1:-0.513865712844;NFE2:-0.527481173686;ZNF143:-0.527667126491;BACH2:-0.528064723029;PAX2:-0.569326131814;HLF:-0.586142028752;FOXP3:-0.587084863295;PAX8:-0.594180954633;HES1:-0.60385099911;TP53:-0.61031721813;ELF1,2,4:-0.635737886664;SREBF1,2:-0.646625661678;OCT4_SOX2{dimer}:-0.653879740094;ONECUT1,2:-0.685520206407;NANOG{mouse}:-0.69050501446;FOXQ1:-0.725509383924;NRF1:-0.82082642113;EVI1:-0.875130784366;ARID5B:-0.877965388913;ZIC1..3:-0.879366829223;UFEwm:-0.896581920419;HOX{A4,D4}:-0.930364402834;PAX1,9:-0.945105944459;NFIX:-0.945661730825;POU1F1:-0.966222894531;NFE2L2:-1.01392544214;CDX1,2,4:-1.03793648756;ELK1,4_GABP{A,B1}:-1.08370648609;PDX1:-1.09106634446;ALX4:-1.09815892531;NKX2-2,8:-1.146350834;HSF1,2:-1.1719960896;NKX6-1,2:-1.22895542946;YY1:-1.23467798213;CRX:-1.28480558461;PPARG:-1.29570903633;EN1,2:-1.35642719709;MYB:-1.40299928542;HOXA9_MEIS1:-1.62665351512;PAX4:-1.79005844064;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.96280864806;NFE2L1:-2.10103319973 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10062-101H8;search_select_hide=table117:FF:10062-101H8 | |||
}} | }} |
Latest revision as of 12:18, 3 June 2020
Name: | stomach, fetal, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11771 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11771
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11771
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0114 |
10 | 10 | 0.0421 |
100 | 100 | 0.221 |
101 | 101 | 0.614 |
102 | 102 | 0.505 |
103 | 103 | 0.0306 |
104 | 104 | 0.901 |
105 | 105 | 0.686 |
106 | 106 | 0.875 |
107 | 107 | 0.193 |
108 | 108 | 0.607 |
109 | 109 | 0.0316 |
11 | 11 | 0.0682 |
110 | 110 | 0.0429 |
111 | 111 | 0.0855 |
112 | 112 | 0.345 |
113 | 113 | 0.00194 |
114 | 114 | 0.00138 |
115 | 115 | 0.719 |
116 | 116 | 0.745 |
117 | 117 | 0.00542 |
118 | 118 | 0.025 |
119 | 119 | 0.642 |
12 | 12 | 0.581 |
120 | 120 | 0.00987 |
121 | 121 | 0.795 |
122 | 122 | 0.834 |
123 | 123 | 0.324 |
124 | 124 | 0.357 |
125 | 125 | 0.126 |
126 | 126 | 0.66 |
127 | 127 | 0.0263 |
128 | 128 | 0.253 |
129 | 129 | 0.246 |
13 | 13 | 0.0727 |
130 | 130 | 0.892 |
131 | 131 | 0.98 |
132 | 132 | 0.0678 |
133 | 133 | 0.0643 |
134 | 134 | 0.454 |
135 | 135 | 0.926 |
136 | 136 | 0.885 |
137 | 137 | 0.213 |
138 | 138 | 0.974 |
139 | 139 | 0.298 |
14 | 14 | 0.655 |
140 | 140 | 0.686 |
141 | 141 | 0.968 |
142 | 142 | 0.515 |
143 | 143 | 0.0046 |
144 | 144 | 0.7 |
145 | 145 | 0.7 |
146 | 146 | 0.73 |
147 | 147 | 0.987 |
148 | 148 | 0.231 |
149 | 149 | 0.231 |
15 | 15 | 0.0909 |
150 | 150 | 0.515 |
151 | 151 | 0.852 |
152 | 152 | 0.65 |
153 | 153 | 0.878 |
154 | 154 | 0.704 |
155 | 155 | 0.369 |
156 | 156 | 0.917 |
157 | 157 | 0.555 |
158 | 158 | 0.443 |
159 | 159 | 0.367 |
16 | 16 | 0.171 |
160 | 160 | 0.209 |
161 | 161 | 0.385 |
162 | 162 | 0.912 |
163 | 163 | 0.925 |
164 | 164 | 0.0223 |
165 | 165 | 0.508 |
166 | 166 | 0.44 |
167 | 167 | 0.124 |
168 | 168 | 0.367 |
169 | 169 | 0.132 |
17 | 17 | 0.943 |
18 | 18 | 0.00446 |
19 | 19 | 0.91 |
2 | 2 | 0.38 |
20 | 20 | 0.258 |
21 | 21 | 0.0757 |
22 | 22 | 0.527 |
23 | 23 | 0.601 |
24 | 24 | 0.0496 |
25 | 25 | 0.335 |
26 | 26 | 0.494 |
27 | 27 | 0.53 |
28 | 28 | 0.807 |
29 | 29 | 0.00666 |
3 | 3 | 0.0837 |
30 | 30 | 0.133 |
31 | 31 | 0.908 |
32 | 32 | 0.0704 |
33 | 33 | 0.113 |
34 | 34 | 0.364 |
35 | 35 | 0.0781 |
36 | 36 | 0.0172 |
37 | 37 | 0.046 |
38 | 38 | 0.691 |
39 | 39 | 0.835 |
4 | 4 | 0.586 |
40 | 40 | 0.163 |
41 | 41 | 0.0251 |
42 | 42 | 0.184 |
43 | 43 | 0.195 |
44 | 44 | 0.174 |
45 | 45 | 0.662 |
46 | 46 | 0.071 |
47 | 47 | 0.0349 |
48 | 48 | 0.117 |
49 | 49 | 0.296 |
5 | 5 | 0.326 |
50 | 50 | 0.485 |
51 | 51 | 0.817 |
52 | 52 | 0.17 |
53 | 53 | 0.646 |
54 | 54 | 0.765 |
55 | 55 | 0.377 |
56 | 56 | 0.548 |
57 | 57 | 0.28 |
58 | 58 | 0.397 |
59 | 59 | 0.298 |
6 | 6 | 0.321 |
60 | 60 | 0.784 |
61 | 61 | 0.836 |
62 | 62 | 0.202 |
63 | 63 | 0.657 |
64 | 64 | 0.368 |
65 | 65 | 0.968 |
66 | 66 | 0.175 |
67 | 67 | 0.0914 |
68 | 68 | 0.587 |
69 | 69 | 0.695 |
7 | 7 | 0.463 |
70 | 70 | 0.0411 |
71 | 71 | 0.0173 |
72 | 72 | 0.417 |
73 | 73 | 0.326 |
74 | 74 | 0.15 |
75 | 75 | 0.0089 |
76 | 76 | 0.0975 |
77 | 77 | 0.769 |
78 | 78 | 0.845 |
79 | 79 | 0.149 |
8 | 8 | 0.167 |
80 | 80 | 0.47 |
81 | 81 | 0.169 |
82 | 82 | 0.0823 |
83 | 83 | 0.717 |
84 | 84 | 0.731 |
85 | 85 | 0.824 |
86 | 86 | 0.32 |
87 | 87 | 0.0673 |
88 | 88 | 0.791 |
89 | 89 | 0.0535 |
9 | 9 | 0.797 |
90 | 90 | 0.0227 |
91 | 91 | 0.879 |
92 | 92 | 0.945 |
93 | 93 | 0.0267 |
94 | 94 | 0.00883 |
95 | 95 | 0.0382 |
96 | 96 | 0.885 |
97 | 97 | 0.314 |
98 | 98 | 0.2 |
99 | 99 | 0.427 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11771
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010062 human stomach - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000945 (stomach)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010039 (food storage organ)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0005409 (gastrointestinal system)
0001041 (foregut)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010062 (human stomach - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)