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FFCP PHASE1:Mm9::chr4:43496568..43496602,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54390
|EntrezGene=54390
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=A2AIN8,Q8C503
|UniProt=A2AIN8,Q8C503
|association_with_transcript=0bp_to_NM_019436,uc008spw.2_5end
|association_with_transcript=0bp_to_NM_019436,uc008spw.2_5end
|cluster_id=chr4:43496568..43496602,-
|description=CAGE_peak_1_at_Sit1_5end
|description=CAGE_peak_1_at_Sit1_5end
|id=chr4:43496568..43496602,-
|id=chr4:43496568..43496602,-
|ontology_enrichment_celltype=CL:0000791!3.28e-09!9;CL:0000789!3.28e-09!9;CL:0002420!3.28e-09!9;CL:0002419!3.28e-09!9;CL:0000790!3.28e-09!9;CL:0000624!2.31e-08!8;CL:0000838!1.23e-07!12;CL:0000084!6.70e-07!11;CL:0000827!6.70e-07!11;CL:0002031!8.49e-07!25;CL:0000542!9.29e-07!13;CL:0000051!9.29e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000791,1.64e-17,9;CL:0000789,1.64e-17,9;CL:0002420,1.64e-17,9;CL:0002419,1.64e-17,9;CL:0000790,1.64e-17,9;CL:0002031,1.96e-16,25;CL:0000624,9.56e-16,8;CL:0000838,1.67e-15,12;CL:0000542,3.99e-14,13;CL:0000051,3.99e-14,13;CL:0000084,6.00e-14,11;CL:0000827,6.00e-14,11;CL:0000893,6.00e-12,6;CL:0002489,6.00e-12,6;CL:0000898,6.00e-12,6;CL:0000809,6.00e-12,6;CL:0000810,6.00e-12,6;CL:0000895,6.00e-12,6;CL:0000808,6.00e-12,6;CL:0000894,6.00e-12,6;CL:0000806,6.00e-12,6;CL:0000807,6.00e-12,6;CL:0000805,6.00e-12,6;CL:0002425,6.00e-12,6;CL:0002436,6.00e-12,6;CL:0002427,6.00e-12,6;CL:0002428,6.00e-12,6;CL:0002429,6.00e-12,6;CL:0002433,6.00e-12,6;CL:0002431,6.00e-12,6;CL:0002432,6.00e-12,6;CL:0000988,6.36e-12,32;CL:0002032,6.36e-12,32;CL:0000037,6.36e-12,32;CL:0000837,6.36e-12,32;CL:0000553,2.12e-10,6;CL:0000556,2.12e-10,6;CL:0000738,3.04e-10,17;CL:0002087,3.04e-10,17;CL:0002320,4.29e-07,46;CL:0000134,4.29e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.49e-18!29;UBERON:0002193!1.01e-17!48;UBERON:0002390!7.47e-16!45;UBERON:0003061!7.47e-16!45;UBERON:0003408!1.80e-15!24;UBERON:0002370!8.95e-15!23;UBERON:0000974!8.95e-15!23;UBERON:0004807!8.95e-15!23;UBERON:0005058!8.95e-15!23;UBERON:0003351!8.95e-15!23;UBERON:0009113!8.95e-15!23;UBERON:0003295!8.95e-15!23;UBERON:0009722!8.95e-15!23;UBERON:0005562!8.95e-15!23;UBERON:0007690!8.95e-15!23;UBERON:0002405!1.35e-14!70;UBERON:0006562!8.77e-14!24;UBERON:0001557!8.77e-14!24;UBERON:0001042!8.77e-14!24;UBERON:0008814!8.77e-14!24;UBERON:0009145!8.77e-14!24;UBERON:0005057!3.81e-13!51;UBERON:0001004!1.28e-12!42;UBERON:0000065!5.35e-12!41;UBERON:0000072!2.78e-11!27;UBERON:0001041!5.76e-10!92;UBERON:0003081!6.80e-10!88;UBERON:0000077!3.60e-09!97;UBERON:0005911!7.64e-08!69;UBERON:0001007!1.12e-07!128;UBERON:0001555!1.12e-07!128;UBERON:0007026!1.12e-07!128;UBERON:0001048!1.15e-07!147;UBERON:0002530!1.27e-07!65;UBERON:0000063!1.44e-07!35;UBERON:0003104!1.79e-07!131;UBERON:0009142!1.79e-07!131;UBERON:0004119!2.75e-07!130;UBERON:0000925!2.75e-07!130;UBERON:0006595!2.75e-07!130;UBERON:0004921!5.27e-07!126;UBERON:0004185!5.27e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.75e-32,29;UBERON:0005057,6.75e-32,29;UBERON:0002390,1.96e-30,45;UBERON:0003061,1.96e-30,45;UBERON:0002193,2.50e-30,48;UBERON:0002405,2.50e-30,48;UBERON:0003408,4.33e-30,24;UBERON:0002370,1.25e-28,23;UBERON:0000974,1.25e-28,23;UBERON:0004807,1.25e-28,23;UBERON:0005058,1.25e-28,23;UBERON:0003351,1.25e-28,23;UBERON:0009113,1.25e-28,23;UBERON:0003295,1.25e-28,23;UBERON:0009722,1.25e-28,23;UBERON:0005562,1.25e-28,23;UBERON:0007690,1.25e-28,23;UBERON:0006562,3.30e-27,24;UBERON:0001557,3.30e-27,24;UBERON:0001042,3.30e-27,24;UBERON:0008814,3.30e-27,24;UBERON:0009145,3.30e-27,24;UBERON:0000077,2.61e-25,35;UBERON:0000072,1.41e-23,27;UBERON:0001004,1.17e-19,42;UBERON:0000065,1.84e-18,41;UBERON:0007811,3.67e-18,36;UBERON:0003081,1.63e-16,87;UBERON:0000153,2.66e-14,43;UBERON:0001041,3.25e-11,80;UBERON:0000926,1.12e-09,120;UBERON:0004120,1.12e-09,120;UBERON:0006603,1.12e-09,120;UBERON:0003929,6.28e-09,55;UBERON:0005911,1.32e-08,69;UBERON:0002530,1.56e-08,65;UBERON:0002368,8.83e-08,60;UBERON:0000949,3.17e-07,72;UBERON:0002384,4.29e-07,46;UBERON:0001048,7.02e-07,134
|phase1_expression=0,0,0,0,0,0,0,72.5673077741659,21.6814632113567,46.5788407380767,2.56826952338257,3.58974715479014,87.3123722649149,99.571838355238,1.66554880907831,3.23960427823721,1.39912375625629,14.0380663584416,11.2433835556706,7.63901373236454,1.36069264241712,0,0,0.799962113967033,0.91763712426868,0.57423196411502,0,0,0.570070258369122,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37573903019398,54.4021606508508,41.6756310936655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.37020655662872,13.7237078333001,0.29688427812965,0.346970653532272,0,0.230615497256059,0,0,0,0,0.144599356919912,1.76922110389975,0.485300549842228,1.76673214768315,1.93950101254089,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,1.7416975885413,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0.492502392237286,0.324275238183423,0.584799949701329,0,0.134206418760372,0,0,2.64335026387038,0.528901133327089,0,0,0,0,0,0,0,0,0,0.198956472041151,0.58489226135736,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0.482354319504834,0.763877555344259,0.863088412352432,0.324270453550071,0.823684239564244,0,0.372140947668503,0,0,0,0.964887042726734,1.84753190166605,0,0,0,0,0.670025029767263,0,0.195133647857799,0.472905432318573,0.221464689648775,0.478364305972461,0.81931657357869,1.20879487306127,1.59113964439663,0,0,0.491764273019036,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,2.65490276679926,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,0.874442509889552,0,3.41741761595705,0.82554747185289,0.370389054739423,1.69531611304222,2.7338845544205,3.20289442489132,0,0,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0,1.86401793926078,0,0,0,0,0,0,0,0.13020438484395,0,0,0.864090018773596,84.3749692077236,0.608175645870493,4.72470402958205,14.4212113505352,22.9154170454376,38.3455014727841,39.1837165435098,47.1129591686901,46.3436005261998,48.7723562591999,57.1684469725886,60.0340545356875,64.7505694239417,71.0611565263939,0,0,0,0,0.386379188064381,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.50695859978048,0.565879024158229,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.231768651889711,0,0,0.441596760403192,0,0.354951612318675,0.238436189947321,0.436039249896986,0,0.25384382367503,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,1.28922632428979,0,0.220591419119515,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,72.5673077741659,21.6814632113567,46.5788407380767,2.56826952338257,3.58974715479014,87.3123722649149,99.571838355238,1.66554880907831,3.23960427823721,1.39912375625629,14.0380663584416,11.2433835556706,7.63901373236454,1.36069264241712,0,0,0.799962113967033,0.91763712426868,0.57423196411502,0,0,0.570070258369122,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37573903019398,54.4021606508508,41.6756310936655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.37020655662872,13.7237078333001,0.29688427812965,0.346970653532272,0,0.230615497256059,0,0,0,0,0.144599356919912,1.76922110389975,0.485300549842228,1.76673214768315,1.93950101254089,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,1.7416975885413,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0.492502392237286,0.324275238183423,0.584799949701329,0,0.134206418760372,0,0,2.64335026387038,0.528901133327089,0,0,0,0,0,0,0,0,0,0.198956472041151,0.58489226135736,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0.482354319504834,0.763877555344259,0.863088412352432,0.324270453550071,0.823684239564244,0,0.372140947668503,0,0,0,0.964887042726734,1.84753190166605,0,0,0,0,0.670025029767263,0,0.195133647857799,0.472905432318573,0.221464689648775,0.478364305972461,0.81931657357869,1.20879487306127,1.59113964439663,0,0,0.491764273019036,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,2.65490276679926,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,0.874442509889552,0,3.41741761595705,0.82554747185289,0.370389054739423,1.69531611304222,2.7338845544205,3.20289442489132,0,0,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0,1.86401793926078,0,0,0,0,0,0,0,0.13020438484395,0,0,0.864090018773596,84.3749692077236,0.608175645870493,4.72470402958205,14.4212113505352,22.9154170454376,38.3455014727841,39.1837165435098,47.1129591686901,46.3436005261998,48.7723562591999,57.1684469725886,60.0340545356875,64.7505694239417,71.0611565263939,0,0,0,0,0.386379188064381,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.50695859978048,0.565879024158229,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.231768651889711,0,0,0.441596760403192,0,0.354951612318675,0.238436189947321,0.436039249896986,0,0.25384382367503,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,1.28922632428979,0,0.220591419119515,0.695603506861264
|short_description=p1@Sit1
|short_description=p1@Sit1
}}
}}

Latest revision as of 00:09, 27 September 2015

Short description:p1@Sit1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sit1_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 0bp_to_NM_019436, uc008spw.2_5end
EntrezGene:Sit1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sit1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E972.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F246.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.59
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E487.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E899.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I954.40
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H913.72
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B584.37
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C514.42
thymus, embryo E17.CNhs10581.478-18C122.92
thymus, embryo E18.CNhs10595.1273-19G438.35
thymus, neonate N02.CNhs11181.1541-43F839.18
thymus, neonate N03.CNhs11137.2104-43C747.11
thymus, neonate N06.CNhs11197.681-26C446.34
thymus, neonate N07.CNhs11211.713-19D348.77
thymus, neonate N10.CNhs11194.748-24E457.17
thymus, neonate N20.CNhs11186.820-7A260.03
thymus, neonate N25.CNhs11125.1362-25G764.75
thymus, neonate N30.CNhs11132.1393-42G271.06
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.64e-179
alpha-beta T cell1.64e-179
immature T cell1.64e-179
mature T cell1.64e-179
immature alpha-beta T cell1.64e-179
hematopoietic lineage restricted progenitor cell1.96e-1625
CD4-positive, alpha-beta T cell9.56e-168
lymphoid lineage restricted progenitor cell1.67e-1512
lymphocyte3.99e-1413
common lymphoid progenitor3.99e-1413
T cell6.00e-1411
pro-T cell6.00e-1411
thymocyte6.00e-126
double negative thymocyte6.00e-126
naive T cell6.00e-126
double-positive, alpha-beta thymocyte6.00e-126
CD4-positive, alpha-beta thymocyte6.00e-126
naive thymus-derived CD4-positive, alpha-beta T cell6.00e-126
DN4 thymocyte6.00e-126
DN1 thymic pro-T cell6.00e-126
DN2 thymocyte6.00e-126
DN3 thymocyte6.00e-126
immature single positive thymocyte6.00e-126
early T lineage precursor6.00e-126
mature CD4 single-positive thymocyte6.00e-126
resting double-positive thymocyte6.00e-126
double-positive blast6.00e-126
CD69-positive double-positive thymocyte6.00e-126
CD69-positive, CD4-positive single-positive thymocyte6.00e-126
CD4-positive, CD8-intermediate double-positive thymocyte6.00e-126
CD24-positive, CD4 single-positive thymocyte6.00e-126
hematopoietic cell6.36e-1232
hematopoietic oligopotent progenitor cell6.36e-1232
hematopoietic stem cell6.36e-1232
hematopoietic multipotent progenitor cell6.36e-1232
megakaryocyte progenitor cell2.12e-106
megakaryocyte2.12e-106
leukocyte3.04e-1017
nongranular leukocyte3.04e-1017
connective tissue cell4.29e-0746
mesenchymal cell4.29e-0746

Uber anatomy
Ontology termp-valuen
hemopoietic organ6.75e-3229
immune organ6.75e-3229
hematopoietic system1.96e-3045
blood island1.96e-3045
hemolymphoid system2.50e-3048
immune system2.50e-3048
gland of gut4.33e-3024
thymus1.25e-2823
neck1.25e-2823
respiratory system epithelium1.25e-2823
hemolymphoid system gland1.25e-2823
pharyngeal epithelium1.25e-2823
thymic region1.25e-2823
pharyngeal gland1.25e-2823
entire pharyngeal arch endoderm1.25e-2823
thymus primordium1.25e-2823
early pharyngeal endoderm1.25e-2823
pharynx3.30e-2724
upper respiratory tract3.30e-2724
chordate pharynx3.30e-2724
pharyngeal arch system3.30e-2724
pharyngeal region of foregut3.30e-2724
mixed endoderm/mesoderm-derived structure2.61e-2535
segment of respiratory tract1.41e-2327
respiratory system1.17e-1942
respiratory tract1.84e-1841
craniocervical region3.67e-1836
lateral plate mesoderm1.63e-1687
anterior region of body2.66e-1443
foregut3.25e-1180
mesoderm1.12e-09120
mesoderm-derived structure1.12e-09120
presumptive mesoderm1.12e-09120
gut epithelium6.28e-0955
endo-epithelium1.32e-0869
gland1.56e-0865
endocrine gland8.83e-0860
endocrine system3.17e-0772
connective tissue4.29e-0746
primordium7.02e-07134
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