FFCP PHASE1:Mm9::chr4:129250814..129250842,-: Difference between revisions
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{{FFCP|EntrezGene=16818|HGNC=|MCL_coexpression_id=319|UniProt=P06240,B2KG64|association_with_transcript=42bp_to_ENSMUST00000102596,NM_001162433,uc008uxj.2_5end|description=CAGE_peak_3_at_Lck_5end|id=chr4:129250814..129250842,-|ontology_enrichment_celltype=CL:0000838!1.48e-11!12;CL:0000084!5.11e-11!11;CL:0000827!5.11e-11!11;CL:0000542!2.91e-10!13;CL:0000051!2.91e-10!13;CL:0000791!9.33e-10!9;CL:0000789!9.33e-10!9;CL:0002420!9.33e-10!9;CL:0002419!9.33e-10!9;CL:0000790!9.33e-10!9;CL:0000624!7.18e-09!8;CL:0002031!7.72e-09!25;CL:0000893!4.81e-07!6;CL:0002489!4.81e-07!6;CL:0000898!4.81e-07!6;CL:0000809!4.81e-07!6;CL:0000810!4.81e-07!6;CL:0000895!4.81e-07!6;CL:0000808!4.81e-07!6;CL:0000894!4.81e-07!6;CL:0000806!4.81e-07!6;CL:0000807!4.81e-07!6;CL:0000805!4.81e-07!6;CL:0002425!4.81e-07!6;CL:0002436!4.81e-07!6;CL:0002427!4.81e-07!6;CL:0002428!4.81e-07!6;CL:0002429!4.81e-07!6;CL:0002433!4.81e-07!6;CL:0002431!4.81e-07!6;CL:0002432!4.81e-07!6|ontology_enrichment_celltype_v019_2=CL:0000838,2.69e-19,12;CL:0000084,2.44e-18,11;CL:0000827,2.44e-18,11;CL:0000542,1.53e-17,13;CL:0000051,1.53e-17,13;CL:0002031,3.94e-17,25;CL:0000791,4.23e-16,9;CL:0000789,4.23e-16,9;CL:0002420,4.23e-16,9;CL:0002419,4.23e-16,9;CL:0000790,4.23e-16,9;CL:0000624,1.58e-14,8;CL:0000738,1.33e-12,17;CL:0002087,1.33e-12,17;CL:0000988,3.03e-12,32;CL:0002032,3.03e-12,32;CL:0000037,3.03e-12,32;CL:0000837,3.03e-12,32;CL:0000893,2.67e-11,6;CL:0002489,2.67e-11,6;CL:0000898,2.67e-11,6;CL:0000809,2.67e-11,6;CL:0000810,2.67e-11,6;CL:0000895,2.67e-11,6;CL:0000808,2.67e-11,6;CL:0000894,2.67e-11,6;CL:0000806,2.67e-11,6;CL:0000807,2.67e-11,6;CL:0000805,2.67e-11,6;CL:0002425,2.67e-11,6;CL:0002436,2.67e-11,6;CL:0002427,2.67e-11,6;CL:0002428,2.67e-11,6;CL:0002429,2.67e-11,6;CL:0002433,2.67e-11,6;CL:0002431,2.67e-11,6;CL:0002432,2.67e-11,6;CL:0000553,4.85e-08,6;CL:0000556,4.85e-08,6;CL:0002320,4.75e-07,46;CL:0000134,4.75e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.39e-17!29;UBERON:0003408!2.05e-15!24;UBERON:0002193!3.47e-15!48;UBERON:0002370!9.60e-15!23;UBERON:0000974!9.60e-15!23;UBERON:0004807!9.60e-15!23;UBERON:0005058!9.60e-15!23;UBERON:0003351!9.60e-15!23;UBERON:0009113!9.60e-15!23;UBERON:0003295!9.60e-15!23;UBERON:0009722!9.60e-15!23;UBERON:0005562!9.60e-15!23;UBERON:0007690!9.60e-15!23;UBERON:0006562!9.59e-14!24;UBERON:0001557!9.59e-14!24;UBERON:0001042!9.59e-14!24;UBERON:0008814!9.59e-14!24;UBERON:0009145!9.59e-14!24;UBERON:0002390!2.68e-13!45;UBERON:0003061!2.68e-13!45;UBERON:0001004!4.35e-12!42;UBERON:0000065!1.71e-11!41;UBERON:0000072!3.18e-11!27;UBERON:0002405!1.03e-10!70;UBERON:0005057!5.15e-10!51;UBERON:0001007!1.20e-09!128;UBERON:0001555!1.20e-09!128;UBERON:0007026!1.20e-09!128;UBERON:0004119!3.49e-09!130;UBERON:0000925!3.49e-09!130;UBERON:0006595!3.49e-09!130;UBERON:0004921!7.70e-09!126;UBERON:0004185!7.70e-09!126;UBERON:0000063!2.13e-08!35;UBERON:0001041!1.18e-07!92;UBERON:0000077!1.37e-07!97;UBERON:0003081!2.99e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.40e-29,48;UBERON:0002405,1.40e-29,48;UBERON:0004177,5.60e-29,29;UBERON:0005057,5.60e-29,29;UBERON:0003408,1.04e-27,24;UBERON:0002370,1.65e-26,23;UBERON:0000974,1.65e-26,23;UBERON:0004807,1.65e-26,23;UBERON:0005058,1.65e-26,23;UBERON:0003351,1.65e-26,23;UBERON:0009113,1.65e-26,23;UBERON:0003295,1.65e-26,23;UBERON:0009722,1.65e-26,23;UBERON:0005562,1.65e-26,23;UBERON:0007690,1.65e-26,23;UBERON:0002390,4.62e-26,45;UBERON:0003061,4.62e-26,45;UBERON:0006562,3.89e-25,24;UBERON:0001557,3.89e-25,24;UBERON:0001042,3.89e-25,24;UBERON:0008814,3.89e-25,24;UBERON:0009145,3.89e-25,24;UBERON:0000077,1.03e-22,35;UBERON:0001004,7.46e-22,42;UBERON:0000072,1.24e-21,27;UBERON:0000065,9.04e-21,41;UBERON:0007811,2.82e-16,36;UBERON:0000153,1.34e-12,43;UBERON:0001007,1.57e-12,116;UBERON:0001555,1.57e-12,116;UBERON:0007026,1.57e-12,116;UBERON:0001041,1.94e-12,80;UBERON:0004119,3.90e-12,118;UBERON:0000925,3.90e-12,118;UBERON:0006595,3.90e-12,118;UBERON:0004921,2.97e-11,114;UBERON:0005911,3.18e-10,69;UBERON:0002530,1.63e-09,65;UBERON:0003081,2.56e-09,87;UBERON:0003929,1.68e-08,55;UBERON:0002368,3.90e-08,60;UBERON:0002384,4.75e-07,46|phase1_expression=0,0,0,0,0,0,0,172.379636794504,176.408268856038,406.804146747625,68.829623226653,74.8262851376255,82.34755109691,129.119934372859,1.33243904726265,1.61980213911861,1.39912375625629,8.3597473819933,7.40417941470989,8.06340338416257,2.8064285749853,6.35462087685666,2.87319768052829,2.71987118748791,1.83527424853736,0,0.430761996159075,0,3.6104449696711,6.30075324399827,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,2.34895648480831,71.8108520591231,69.2353226233476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.08296475241462,32.6261733395436,2.07818994690755,0,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0,4.34276993854605,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.622034853050465,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.350296027101508,0,0.492502392237286,0.243206428637567,0.730999937126662,0.439100230582101,0,0.210289948564127,0,8.26046957459495,1.05780226665418,0,0,0,0,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.596869416123452,0.779856348476481,0,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,2.49630138491648,0.505157755894224,0,0.482443521363367,3.8798169934987,0,0,0,0,1.00503754465089,0,0,0.630540576424764,1.10732344824387,1.59454768657487,1.80249646187312,2.41758974612254,0.867894351489069,0,0,1.47529281905711,1.37968373152366,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,0,8.37267315909478,0,0.555583582109135,3.57900068308913,5.33107488111998,6.40578884978263,1.01987057996313,1.25956307091292,0.414599921413271,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0.259229946583586,3.72803587852155,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,47.7176792148549,5.0681303822541,9.75754093065859,16.3700236952022,21.3041767844303,28.8087964432834,28.4863215362326,29.0948368533917,31.0976665840295,24.8434189695299,27.828027097768,35.9619579929686,41.755939271903,40.4394081548229,0,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.644613162144895,0,0,0.463735671240843|short_description=p3@Lck}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16818 | |||
|HGNC= | |||
|MCL_coexpression_id=319 | |||
|TSSclassifier=NA | |||
|UniProt=P06240,B2KG64 | |||
|association_with_transcript=42bp_to_ENSMUST00000102596,NM_001162433,uc008uxj.2_5end | |||
|cluster_id=chr4:129250814..129250842,- | |||
|description=CAGE_peak_3_at_Lck_5end | |||
|id=chr4:129250814..129250842,- | |||
|ontology_enrichment_celltype=CL:0000838!1.48e-11!12;CL:0000084!5.11e-11!11;CL:0000827!5.11e-11!11;CL:0000542!2.91e-10!13;CL:0000051!2.91e-10!13;CL:0000791!9.33e-10!9;CL:0000789!9.33e-10!9;CL:0002420!9.33e-10!9;CL:0002419!9.33e-10!9;CL:0000790!9.33e-10!9;CL:0000624!7.18e-09!8;CL:0002031!7.72e-09!25;CL:0000893!4.81e-07!6;CL:0002489!4.81e-07!6;CL:0000898!4.81e-07!6;CL:0000809!4.81e-07!6;CL:0000810!4.81e-07!6;CL:0000895!4.81e-07!6;CL:0000808!4.81e-07!6;CL:0000894!4.81e-07!6;CL:0000806!4.81e-07!6;CL:0000807!4.81e-07!6;CL:0000805!4.81e-07!6;CL:0002425!4.81e-07!6;CL:0002436!4.81e-07!6;CL:0002427!4.81e-07!6;CL:0002428!4.81e-07!6;CL:0002429!4.81e-07!6;CL:0002433!4.81e-07!6;CL:0002431!4.81e-07!6;CL:0002432!4.81e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.69e-19,12;CL:0000084,2.44e-18,11;CL:0000827,2.44e-18,11;CL:0000542,1.53e-17,13;CL:0000051,1.53e-17,13;CL:0002031,3.94e-17,25;CL:0000791,4.23e-16,9;CL:0000789,4.23e-16,9;CL:0002420,4.23e-16,9;CL:0002419,4.23e-16,9;CL:0000790,4.23e-16,9;CL:0000624,1.58e-14,8;CL:0000738,1.33e-12,17;CL:0002087,1.33e-12,17;CL:0000988,3.03e-12,32;CL:0002032,3.03e-12,32;CL:0000037,3.03e-12,32;CL:0000837,3.03e-12,32;CL:0000893,2.67e-11,6;CL:0002489,2.67e-11,6;CL:0000898,2.67e-11,6;CL:0000809,2.67e-11,6;CL:0000810,2.67e-11,6;CL:0000895,2.67e-11,6;CL:0000808,2.67e-11,6;CL:0000894,2.67e-11,6;CL:0000806,2.67e-11,6;CL:0000807,2.67e-11,6;CL:0000805,2.67e-11,6;CL:0002425,2.67e-11,6;CL:0002436,2.67e-11,6;CL:0002427,2.67e-11,6;CL:0002428,2.67e-11,6;CL:0002429,2.67e-11,6;CL:0002433,2.67e-11,6;CL:0002431,2.67e-11,6;CL:0002432,2.67e-11,6;CL:0000553,4.85e-08,6;CL:0000556,4.85e-08,6;CL:0002320,4.75e-07,46;CL:0000134,4.75e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.39e-17!29;UBERON:0003408!2.05e-15!24;UBERON:0002193!3.47e-15!48;UBERON:0002370!9.60e-15!23;UBERON:0000974!9.60e-15!23;UBERON:0004807!9.60e-15!23;UBERON:0005058!9.60e-15!23;UBERON:0003351!9.60e-15!23;UBERON:0009113!9.60e-15!23;UBERON:0003295!9.60e-15!23;UBERON:0009722!9.60e-15!23;UBERON:0005562!9.60e-15!23;UBERON:0007690!9.60e-15!23;UBERON:0006562!9.59e-14!24;UBERON:0001557!9.59e-14!24;UBERON:0001042!9.59e-14!24;UBERON:0008814!9.59e-14!24;UBERON:0009145!9.59e-14!24;UBERON:0002390!2.68e-13!45;UBERON:0003061!2.68e-13!45;UBERON:0001004!4.35e-12!42;UBERON:0000065!1.71e-11!41;UBERON:0000072!3.18e-11!27;UBERON:0002405!1.03e-10!70;UBERON:0005057!5.15e-10!51;UBERON:0001007!1.20e-09!128;UBERON:0001555!1.20e-09!128;UBERON:0007026!1.20e-09!128;UBERON:0004119!3.49e-09!130;UBERON:0000925!3.49e-09!130;UBERON:0006595!3.49e-09!130;UBERON:0004921!7.70e-09!126;UBERON:0004185!7.70e-09!126;UBERON:0000063!2.13e-08!35;UBERON:0001041!1.18e-07!92;UBERON:0000077!1.37e-07!97;UBERON:0003081!2.99e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.40e-29,48;UBERON:0002405,1.40e-29,48;UBERON:0004177,5.60e-29,29;UBERON:0005057,5.60e-29,29;UBERON:0003408,1.04e-27,24;UBERON:0002370,1.65e-26,23;UBERON:0000974,1.65e-26,23;UBERON:0004807,1.65e-26,23;UBERON:0005058,1.65e-26,23;UBERON:0003351,1.65e-26,23;UBERON:0009113,1.65e-26,23;UBERON:0003295,1.65e-26,23;UBERON:0009722,1.65e-26,23;UBERON:0005562,1.65e-26,23;UBERON:0007690,1.65e-26,23;UBERON:0002390,4.62e-26,45;UBERON:0003061,4.62e-26,45;UBERON:0006562,3.89e-25,24;UBERON:0001557,3.89e-25,24;UBERON:0001042,3.89e-25,24;UBERON:0008814,3.89e-25,24;UBERON:0009145,3.89e-25,24;UBERON:0000077,1.03e-22,35;UBERON:0001004,7.46e-22,42;UBERON:0000072,1.24e-21,27;UBERON:0000065,9.04e-21,41;UBERON:0007811,2.82e-16,36;UBERON:0000153,1.34e-12,43;UBERON:0001007,1.57e-12,116;UBERON:0001555,1.57e-12,116;UBERON:0007026,1.57e-12,116;UBERON:0001041,1.94e-12,80;UBERON:0004119,3.90e-12,118;UBERON:0000925,3.90e-12,118;UBERON:0006595,3.90e-12,118;UBERON:0004921,2.97e-11,114;UBERON:0005911,3.18e-10,69;UBERON:0002530,1.63e-09,65;UBERON:0003081,2.56e-09,87;UBERON:0003929,1.68e-08,55;UBERON:0002368,3.90e-08,60;UBERON:0002384,4.75e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,172.379636794504,176.408268856038,406.804146747625,68.829623226653,74.8262851376255,82.34755109691,129.119934372859,1.33243904726265,1.61980213911861,1.39912375625629,8.3597473819933,7.40417941470989,8.06340338416257,2.8064285749853,6.35462087685666,2.87319768052829,2.71987118748791,1.83527424853736,0,0.430761996159075,0,3.6104449696711,6.30075324399827,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,2.34895648480831,71.8108520591231,69.2353226233476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.08296475241462,32.6261733395436,2.07818994690755,0,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0,4.34276993854605,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.622034853050465,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.350296027101508,0,0.492502392237286,0.243206428637567,0.730999937126662,0.439100230582101,0,0.210289948564127,0,8.26046957459495,1.05780226665418,0,0,0,0,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.596869416123452,0.779856348476481,0,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,2.49630138491648,0.505157755894224,0,0.482443521363367,3.8798169934987,0,0,0,0,1.00503754465089,0,0,0.630540576424764,1.10732344824387,1.59454768657487,1.80249646187312,2.41758974612254,0.867894351489069,0,0,1.47529281905711,1.37968373152366,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,0,8.37267315909478,0,0.555583582109135,3.57900068308913,5.33107488111998,6.40578884978263,1.01987057996313,1.25956307091292,0.414599921413271,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0.259229946583586,3.72803587852155,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,47.7176792148549,5.0681303822541,9.75754093065859,16.3700236952022,21.3041767844303,28.8087964432834,28.4863215362326,29.0948368533917,31.0976665840295,24.8434189695299,27.828027097768,35.9619579929686,41.755939271903,40.4394081548229,0,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.644613162144895,0,0,0.463735671240843 | |||
|short_description=p3@Lck | |||
}} |
Latest revision as of 09:33, 26 September 2015
Short description: | p3@Lck |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lck_5end |
Coexpression cluster: | MCL_coexpression_mm9:319 |
Association with transcript: | 42bp_to_ENSMUST00000102596, NM_001162433, uc008uxj.2_5end |
EntrezGene: | Lck |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data