FFCP PHASE1:Hg19::chr17:46667594..46667619,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5114 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z5N8,B7ZAD0,P14651 | |||
|association_with_transcript=0bp_to_ENST00000460160,ENST00000472863,ENST00000476342_5end | |||
|cluster_id=chr17:46667594..46667619,- | |||
|coexpression_cluster_id=C2414 | |||
|description=CAGE_peak_1_at_HOXB3_5end | |||
|id=chr17:46667594..46667619,- | |||
|ontology_enrichment_celltype=CL:1000507!2.48e-14!12;CL:1000494!2.48e-14!12;CL:1000449!4.18e-13!16;CL:1000497!3.77e-11!18;CL:0002518!3.77e-11!18;CL:0002681!6.78e-10!13;CL:0002584!6.78e-10!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.61e-17;10!CL:1000494;1.61e-17;10!CL:1000449;6.46e-13;15!CL:1000497;4.54e-11;17!CL:0002518;4.54e-11;17!CL:0002681;1.32e-08;12!CL:0002584;1.32e-08;12!CL:0000239;7.50e-07;3!CL:1000615;7.50e-07;3!CL:0002306;7.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.37e-17,10;CL:1000494,1.37e-17,10;CL:1000449,5.98e-13,15;CL:1000497,4.25e-11,17;CL:0002518,4.25e-11,17;CL:0002681,1.18e-08,12;CL:0002584,1.18e-08,12;CL:0000239,7.37e-07,3;CL:1000615,7.37e-07,3;CL:0002306,7.37e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!8.57e-17!32;UBERON:0002113!1.61e-16!27;UBERON:0003918!1.61e-16!27;UBERON:0005095!1.61e-16!27;UBERON:0007687!1.61e-16!27;UBERON:0003887!5.55e-16!21;UBERON:0000080!1.49e-15!18;UBERON:0002120!1.49e-15!18;UBERON:0004875!1.49e-15!18;UBERON:0005721!1.49e-15!18;UBERON:0005754!1.49e-15!18;UBERON:0007297!1.49e-15!18;UBERON:0002417!3.86e-15!61;UBERON:0000916!3.86e-15!61;UBERON:0009773!2.48e-14!12;UBERON:0001231!2.48e-14!12;UBERON:0004810!2.48e-14!12;UBERON:0009569!2.52e-14!113;UBERON:0006555!2.58e-14!17;UBERON:0005103!2.58e-14!17;UBERON:0000083!2.58e-14!17;UBERON:0009201!2.58e-14!17;UBERON:0004819!2.58e-14!17;UBERON:0006553!2.58e-14!17;UBERON:0003074!2.58e-14!17;UBERON:0003060!2.58e-14!17;UBERON:0001008!5.66e-14!45;UBERON:0004876!1.89e-13!20;UBERON:0006554!3.23e-13!44;UBERON:0004211!4.18e-13!16;UBERON:0001285!4.18e-13!16;UBERON:0007684!4.18e-13!16;UBERON:0003220!4.18e-13!16;UBERON:0004208!4.18e-13!16;UBERON:0005177!1.58e-12!107;UBERON:0000058!2.34e-12!26;UBERON:0002100!3.98e-12!216;UBERON:0003886!5.89e-12!63;UBERON:0003064!1.88e-11!37;UBERON:0000464!2.73e-11!104;UBERON:0005172!3.59e-11!55;UBERON:0005173!3.59e-11!55;UBERON:0000059!1.37e-10!11;UBERON:0000466!4.91e-10!126;UBERON:0001225!6.78e-10!13;UBERON:0008987!6.78e-10!13;UBERON:0002553!8.98e-10!70;UBERON:0003104!3.03e-09!238;UBERON:0009142!3.03e-09!238;UBERON:0005409!4.81e-09!35;UBERON:0001155!2.43e-08!9;UBERON:0000353!4.19e-08!17;UBERON:0004175!6.26e-08!25;UBERON:0001851!1.85e-07!16;UBERON:0000160!2.61e-07!27;UBERON:0005256!3.69e-07!143;UBERON:0005156!6.81e-07!59;UBERON:0000990!6.81e-07!59;UBERON:0003688!7.15e-07!6;UBERON:0002358!7.15e-07!6;UBERON:0003684!7.15e-07!6;UBERON:0001178!7.15e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.61e-17;10!UBERON:0009773;1.61e-17;10!UBERON:0001231;1.61e-17;10!UBERON:0004810;1.61e-17;10!UBERON:0002113;2.42e-14;24!UBERON:0011143;2.42e-14;24!UBERON:0000160;3.74e-14;17!UBERON:0006555;6.46e-13;15!UBERON:0004819;6.46e-13;15!UBERON:0001285;6.46e-13;15!UBERON:0007684;6.46e-13;15!UBERON:0000489;9.50e-13;29!UBERON:0000059;1.81e-12;11!UBERON:0005409;2.77e-12;22!UBERON:0006554;1.23e-10;30!UBERON:0001008;1.23e-10;30!UBERON:0003688;2.40e-09;6!UBERON:0002358;2.40e-09;6!UBERON:0003684;2.40e-09;6!UBERON:0001178;2.40e-09;6!UBERON:0001155;2.68e-09;9!UBERON:0004175;7.32e-09;21!UBERON:0001225;1.32e-08;12!UBERON:0008987;1.32e-08;12!UBERON:0004457;2.20e-08;9!UBERON:0000042;2.20e-08;9!UBERON:0006947;2.56e-07;3!UBERON:0004054;2.56e-07;3!UBERON:0006853;7.50e-07;3!UBERON:0007685;7.50e-07;3!UBERON:0004134;7.50e-07;3!UBERON:0002417;9.45e-07;58!UBERON:0000916;9.45e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.37e-17,10;UBERON:0002113,2.11e-17,26;UBERON:0003918,2.11e-17,26;UBERON:0011143,2.11e-17,26;UBERON:0005095,2.11e-17,26;UBERON:0007687,2.11e-17,26;UBERON:0000489,1.61e-15,31;UBERON:0002417,8.03e-15,60;UBERON:0000916,8.03e-15,60;UBERON:0006555,1.36e-14,16;UBERON:0004819,1.36e-14,16;UBERON:0000160,4.37e-14,17;UBERON:0004211,5.98e-13,15;UBERON:0009773,5.98e-13,15;UBERON:0001231,5.98e-13,15;UBERON:0001285,5.98e-13,15;UBERON:0007684,5.98e-13,15;UBERON:0004208,5.98e-13,15;UBERON:0009569,1.01e-12,112;UBERON:0000059,1.63e-12,11;UBERON:0005409,5.42e-12,25;UBERON:0001008,1.29e-11,48;UBERON:0006554,9.66e-11,47;UBERON:0005172,6.65e-10,54;UBERON:0005173,6.65e-10,54;UBERON:0001155,2.34e-09,9;UBERON:0003688,2.66e-09,6;UBERON:0002358,2.66e-09,6;UBERON:0003684,2.66e-09,6;UBERON:0001178,2.66e-09,6;UBERON:0003104,3.41e-09,160;UBERON:0009142,3.41e-09,160;UBERON:0005177,3.89e-09,101;UBERON:0002100,7.07e-09,199;UBERON:0001225,1.18e-08,12;UBERON:0008987,1.18e-08,12;UBERON:0004175,2.56e-08,25;UBERON:0004457,1.00e-07,12;UBERON:0000042,1.00e-07,12;UBERON:0006947,2.57e-07,3;UBERON:0004054,2.57e-07,3;UBERON:0006853,7.37e-07,3;UBERON:0007685,7.37e-07,3;UBERON:0004134,7.37e-07,3 | |||
|phase1_expression=0,0.214100523890983,2.11431606143957,1.0007329835313,1.78784437770915,0.872338524100369,0,0,1.04474251279935,5.16041266653169,1.39560233594486,0,0,0.618831764800233,1.98838425436749,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,2.80254281490768,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.896692083310806,9.74706338743249,4.20869655357142,4.77532742787645,0,0,0,0,0,1.82032272387605,8.62341770179486,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,24.9788971717074,11.0103815832154,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,1.55126058909333,0,0,0.531876233169741,0,0.257207374262142,0,0,0.428933980974443,2.71310802695722,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,11.5039219843726,5.69656549769445,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.686286847621712,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,1.53461973288062,0.280660094433074,1.79394808957981,3.07024349440022,3.21707842287215,0,1.69630663182921,0,1.64254312027618,0,1.74315567689939,8.33930202182193,0,0,0.114814448164607,0,0.524497659837696,5.86559496779635,1.77135275340154,10.980896768476,14.6139224653261,4.11651352682215,0,0.680374821106063,0.431831832204279,0,3.25135725052623,7.02365683396795,8.15604073744123,15.7904441696458,17.9099803777743,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,1.39453664789186,1.5740617341532,0,0,0,0,0,0,0,0,0.38126038784765,6.65334257409468,9.41465773674625,0,0,4.8565563547495,6.58888871366531,6.71530693370413,0,0,0,0,0,0,0.818999468447914,0,0,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0,0,0,1.72093622644862,0.982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,16.9338866179106,0,26.3949347426651,0,0,20.0507581672054,3.72441911163527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5019904594822,0,0,0,0,0,0,0,0,0,4.42054264849836,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,2.6932590476329,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,3.98104772431402,3.62676014463691,6.11030144933625,0,0,0,0,0.802577647298789,0,0,0,0.242780379534093,29.1992458108549,1.20990716048664,0.61214552326098,0,12.7774906502319,15.7606050923816,0,0,0,0,21.0611064062047,3.60554149834161,0,0,0,23.413373544432,0,0,0,0,0,0,0,0,0,0,6.2576442475137,0,0,0,0,0.114536596165916,17.6742847797824,0,3.10631338913581,0,16.7162173470545,17.7824838730966,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,18.6393519243926,0,0,0,2.36225955635397,0,0,0,0,0,0,0,0,0,0,5.43759380364467,57.3328648315529,1.26720403823288,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.213574825135389,3.14408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434674820589684,0,0,0,0,0,0,1.7390523433299,0,0,1.10961172300523,0,0,0,0,0,0,0,0,0,0,0.414706207840855,1.06336685823198,0.521745061811734,0,1.14241563650639,1.62748293281865,0,0.107410557042488,0,0.796191777397232,0,2.40376993627955,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.619678821295011,0,0,0,21.6154102037077,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,5.62787981950786,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,1.49136876415977,0,17.0966019621411,6.39211104356647,0,0,0,0,9.06683117871377,4.69417335216964,0,0,0,0,0,0,0,31.7540287643197,0,4.34288939930048,4.77769469488717,0,12.9558308372121,0,0,0,0,1.45713297917742,20.5866727846653,0.198950775161368,0,0,0,36.985896673835,1.23478652972711,2.18559560503957,50.7942680070445,0,44.5428674022073,0.392616934229891,0,2.5359343655004,0,0.657887425858975,1.93373663920732,0,0,0,0,0.730336388246517,0,0,17.5126434034435,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,2.19758224832894,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,1.9307228228694,0,0,4.76741632313179,8.54481974463051,2.66302709674205,0,0 | |||
|short_description=p1@HOXB3 | |||
}} |
Latest revision as of 07:05, 25 September 2015
Short description: | p1@HOXB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXB3_5end |
Coexpression cluster: | C2414_kidney_smallcell_seminal_somatostatinoma_ductus_small_Fibroblast |
Association with transcript: | 0bp_to_ENST00000460160, ENST00000472863, ENST00000476342_5end |
EntrezGene: | HOXB3 |
HGNC: | 5114 |
UniProt: | B7Z5N8B7ZAD0P14651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.37e-17 | 10 |
nephron tubule epithelial cell | 1.37e-17 | 10 |
epithelial cell of nephron | 5.98e-13 | 15 |
kidney cell | 4.25e-11 | 17 |
kidney epithelial cell | 4.25e-11 | 17 |
kidney cortical cell | 1.18e-08 | 12 |
renal cortical epithelial cell | 1.18e-08 | 12 |
brush border epithelial cell | 7.37e-07 | 3 |
kidney cortex tubule cell | 7.37e-07 | 3 |
epithelial cell of proximal tubule | 7.37e-07 | 3 |