FFCP PHASE1:Hg19::chr12:80083991..80084002,-: Difference between revisions
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|id=chr12:80083991..80084002,-
|short_description=p40@PAWR
|description=CAGE_peak_40_at_PAWR_5end
|association_with_transcript=-131bp_to_ENST00000551712_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5074 | |EntrezGene=5074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |HGNC=8614 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-131bp_to_ENST00000551712_5end | |||
|cluster_id=chr12:80083991..80084002,- | |||
|description=CAGE_peak_40_at_PAWR_5end | |||
|id=chr12:80083991..80084002,- | |||
|ontology_enrichment_celltype=CL:0002139!8.79e-17!24;CL:0000066!5.86e-14!254;CL:0000115!3.45e-13!35;CL:0000071!1.04e-12!18;CL:0002546!1.04e-12!18;CL:0002078!1.95e-09!44;CL:0000213!3.57e-09!57;CL:0000215!3.57e-09!57;CL:0000076!2.80e-08!62;CL:0002544!4.26e-08!6;CL:1000413!3.07e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002144;8.00e-18;3!CL:0002188;3.42e-11;5!CL:0000138;1.22e-09;6!CL:0002540;1.50e-09;6!CL:1000746;2.26e-08;7!CL:1000612;2.26e-08;7!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,8.00e-18,3;CL:0002188,3.26e-11,5;CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0002540,1.57e-09,6;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.04e-12!18;UBERON:0004638!1.04e-12!18;UBERON:0004852!1.04e-12!18;UBERON:0000487!8.15e-10!22;UBERON:0006914!2.87e-08!25;UBERON:0003915!3.07e-07!9;UBERON:0004700!3.07e-07!9;UBERON:0001917!3.07e-07!9;UBERON:0000055!3.09e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0010523;8.00e-18;3!UBERON:0001915;8.00e-18;3!UBERON:0001982;8.00e-18;3!UBERON:0001474;4.43e-12;18!UBERON:0004765;1.09e-08;26!UBERON:0000074;2.26e-08;7!UBERON:0001229;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0010523,8.00e-18,3;UBERON:0001915,8.00e-18,3;UBERON:0001982,8.00e-18,3;UBERON:0010532,2.18e-08,7;UBERON:0000074,2.18e-08,7;UBERON:0001229,2.18e-08,7;UBERON:0001230,2.18e-08,7;UBERON:0003220,2.18e-08,7;UBERON:0005749,2.18e-08,7;UBERON:0004199,2.18e-08,7;UBERON:0004209,2.18e-08,7;UBERON:0004198,2.18e-08,7;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0.516833518338658,0,0.66944122552934,0,2.28081631715554,0.976248230192678,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.352226082707465,0.288732895522148,0.925971025153221,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,4.23629408119201,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0.308801447160972,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0.20170506870352,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,0.509944148709909,0.26721740526556,0.36757959813938,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,0.224263725161227,0.12729431655633,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0.516833518338658,0,0.66944122552934,0,2.28081631715554,0.976248230192678,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.352226082707465,0.288732895522148,0.925971025153221,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,4.23629408119201,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0.308801447160972,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0.20170506870352,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,0.509944148709909,0.26721740526556,0.36757959813938,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,0.224263725161227,0.12729431655633,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | ||
|short_description=p40@PAWR | |||
}} | }} |
Latest revision as of 00:26, 25 September 2015
Short description: | p40@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_PAWR_5end |
Coexpression cluster: | NA |
Association with transcript: | -131bp_to_ENST00000551712_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 8.00e-18 | 3 |
glomerular endothelial cell | 3.26e-11 | 5 |
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
mesenchymal stem cell of the bone marrow | 1.57e-09 | 6 |
glomerular cell | 2.18e-08 | 7 |
kidney corpuscule cell | 2.18e-08 | 7 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
microcirculatory vessel | 8.00e-18 | 3 |
endothelium of capillary | 8.00e-18 | 3 |
capillary | 8.00e-18 | 3 |
primitive nephron | 2.18e-08 | 7 |
renal glomerulus | 2.18e-08 | 7 |
renal corpuscle | 2.18e-08 | 7 |
glomerular capsule | 2.18e-08 | 7 |
metanephric mesenchyme | 2.18e-08 | 7 |
glomerular tuft | 2.18e-08 | 7 |
S-shaped body | 2.18e-08 | 7 |
renal vesicle | 2.18e-08 | 7 |
comma-shaped body | 2.18e-08 | 7 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |