FFCP PHASE1:Hg19::chr16:19422035..19422090,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:19422035..19422090,+
|short_description=p3@TMC5
|description=CAGE_peak_3_at_TMC5_5end
|association_with_transcript=0bp_to_ENST00000381414,ENST00000396229,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79838 | |EntrezGene=79838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22999 | |HGNC=22999 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXY8 | |UniProt=Q6UXY8 | ||
|association_with_transcript=0bp_to_ENST00000381414,ENST00000396229,NM_001105248,NM_001105249,uc002dgb.3,uc002dgc.3_5end | |||
|cluster_id=chr16:19422035..19422090,+ | |||
|description=CAGE_peak_3_at_TMC5_5end | |||
|id=chr16:19422035..19422090,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.11e-10!254;CL:0000039!7.84e-09!7;CL:0000586!7.84e-09!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.88e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.45e-29;29!UBERON:0006595;3.23e-16;86!UBERON:0009847;8.34e-09;3!UBERON:0003353;8.34e-09;3!UBERON:0001041;1.12e-08;30 | |||
|ontology_enrichment_disease=DOID:305!9.78e-34!106;DOID:0050687!1.76e-28!143;DOID:162!1.69e-15!235;DOID:14566!1.13e-14!239;DOID:299!1.21e-08!25;DOID:1749!5.37e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:305;3.06e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.39e-26,106;DOID:0050687,1.75e-22,143;DOID:162,2.49e-13,235;DOID:14566,8.25e-13,239;DOID:3493,9.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!8.95e-24!129;UBERON:0004185!8.95e-24!129;UBERON:0001007!1.43e-20!155;UBERON:0001555!1.43e-20!155;UBERON:0007026!1.43e-20!155;UBERON:0004119!3.22e-20!169;UBERON:0000925!3.22e-20!169;UBERON:0006595!3.22e-20!169;UBERON:0000077!2.30e-19!130;UBERON:0000065!4.91e-16!53;UBERON:0001041!1.23e-15!98;UBERON:0008947!1.61e-14!38;UBERON:0003258!1.61e-14!38;UBERON:0001004!6.65e-13!72;UBERON:0001737!1.62e-12!9;UBERON:0000072!4.68e-12!46;UBERON:0005409!7.60e-11!35;UBERON:0001557!1.06e-10!19;UBERON:0000063!3.45e-09!97;UBERON:0000160!1.09e-08!27;UBERON:0002048!3.24e-07!22;UBERON:0000117!3.24e-07!22;UBERON:0000171!3.24e-07!22;UBERON:0000170!3.24e-07!22;UBERON:0005597!3.24e-07!22;UBERON:0000118!3.24e-07!22;UBERON:0005153!5.57e-07!37;UBERON:0000466!6.66e-07!126;UBERON:0001048!7.06e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.00e-23;9!UBERON:0001557;1.00e-23;9!UBERON:0005409;6.31e-17;22!UBERON:0004921;2.22e-15;33!UBERON:0000160;5.69e-13;17!UBERON:0000065;8.38e-13;44!UBERON:0000072;1.01e-12;37!UBERON:0001004;1.13e-09;65!UBERON:0002294;5.45e-09;7!UBERON:0001173;5.45e-09;7!UBERON:0002108;8.87e-09;4!UBERON:0000059;2.69e-08;11!UBERON:0002110;1.14e-07;3!UBERON:0002048;9.73e-07;22!UBERON:0000117;9.73e-07;22!UBERON:0000171;9.73e-07;22!UBERON:0000170;9.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.22e-29,118;UBERON:0001007,2.33e-25,145;UBERON:0001555,2.33e-25,145;UBERON:0007026,2.33e-25,145;UBERON:0001737,8.58e-24,9;UBERON:0004119,3.54e-23,160;UBERON:0000925,3.54e-23,160;UBERON:0006595,3.54e-23,160;UBERON:0008947,2.77e-21,38;UBERON:0003258,2.77e-21,38;UBERON:0001041,3.27e-18,87;UBERON:0000065,5.48e-15,54;UBERON:0005409,1.33e-14,25;UBERON:0001004,3.07e-13,74;UBERON:0000160,5.62e-13,17;UBERON:0001557,1.68e-12,19;UBERON:0000072,1.68e-12,47;UBERON:0011216,1.91e-11,223;UBERON:0002108,8.70e-09,4;UBERON:0000059,2.69e-08,11;UBERON:0005153,5.12e-08,37;UBERON:0002110,1.17e-07,3;UBERON:0006242,1.17e-07,3;UBERON:0002294,6.30e-07,9;UBERON:0001173,6.30e-07,9;UBERON:0004912,6.30e-07,9;UBERON:0002048,9.49e-07,22;UBERON:0000117,9.49e-07,22;UBERON:0000171,9.49e-07,22;UBERON:0000170,9.49e-07,22;UBERON:0005597,9.49e-07,22;UBERON:0000118,9.49e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.464775771478074,0.414644220061482,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0,0,2.9576700009961,5.05754070234305,4.09718750801919,4.41175890929576,4.79334777003293,5.93176547777742,5.66291494272691,4.70931516300831,3.46272441251751,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,2.46174797895425,0,0,0,5.23993513143015,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.597743964753209,2.76283915531148,0,0,0,0,0.718946809178615,17.5440751182097,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,4.19807999981739,1.44999915086959,2.04828206913899,5.33932665614809,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,25.1314655782986,5.11618573135701,17.9268163671313,0,0,0,0,0,0.332423363800313,0,0,0,0,0.476809736941136,0.843992258112108,0.652931232636591,0.424059214301822,0,5.97157158647103,3.09601475761687,1.22206028986725,0,0,0,0.337005664903385,0,0,0.729819156862664,7.23959090048732,0,0,2.41981432097328,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,1.39781334593624,0,2.41890828222713,3.14284063470598,2.46346371159628,0.290967049465258,0,0,0,0,0.126621591911757,1.36885967914362,1.28254112402454,1.28071796843612,0.19980960958213,4.7549837660855,0,0,1.00838358591705,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,2.39614800598789,0,0,0.134366944973453,0,2.32991899054908,0,0,0,0,0,0,0,0.803765742325096,0.137539436597234,1.24632101408756,0,0,0.303747783290123,0,0.0788057072991982,0,0.316801009558219,0,1.34340638123612,0,0,0,0,0,0,0,1.80603545648546,0,0.679872549120754,1.02586563574658,0,0,0,7.18564719114184,9.16259529011673,3.41719720216623,7.70301094988363,2.48543433208317,0,0,0.243585196761792,2.55336503108073,0,0.2506898940227,0.306345576763462,0.327872630709804,5.65394746500843,0,0,0,0.573409195690071,0.110929051536852,0,0,0.249960815924213,0,0,3.99951893486892,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0.490738592505128,0,0,0.462102664601353,0,0,0,0.225630985047772,0,3.12605604493237,7.85720083444267,0,3.99211432786022,0,0,0,0,0,0,0.496211178389294,0.175871244359621,4.85497225030462,0,0,0,0.455324382702595,3.01588058552972,0,0,0.0679697329768317,0,7.44621197569,1.11231401892069,4.86657175673187,0,6.16598759290336,4.56579360254748,0,0,0.857718530119876,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0.22910686854405,0,0,0,3.92600934460972,8.04658304882978,0,0.102662806856247,0,0,0.467878926924211,0,0,0.45178432815584,0.219881033490858,0.754814217833368,3.6271854310734,2.18559560503957,1.41095188908457,0,5.4205605833374,0,0,0,0,0,0.0644578879735772,0,5.17806421956407,0,3.93182696776924,5.11235471772562,1.83491713361816,0,0,0.0679914901909147,0,4.7612415646386,0,0,0,0,0,0.126698501011437,0.407955318967927,0.801652215796681,0.36757959813938,1.25353769646188,0.0757786982182394,0,0,0.103432995861895,1.70587185520785,1.1903221573187,0,0.0620747142958579,0.448527450322454,0,0,0.653150243690884,0.342233301085281,1.34704106029175,4.01644350198988,2.32862249582209,0.325613074443898,0,0,0.359300808426348,0,0.488965776731466,0,0,0,0 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| ||
|short_description=p3@TMC5 | |||
}} | }} |
Latest revision as of 23:47, 24 September 2015
Short description: | p3@TMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381414, ENST00000396229, NM_001105248, NM_001105249, uc002dgb.3, uc002dgc.3_5end |
EntrezGene: | TMC5 |
HGNC: | 22999 |
UniProt: | Q6UXY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.88e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 6.22e-29 | 118 |
digestive system | 2.33e-25 | 145 |
digestive tract | 2.33e-25 | 145 |
primitive gut | 2.33e-25 | 145 |
larynx | 8.58e-24 | 9 |
endoderm-derived structure | 3.54e-23 | 160 |
endoderm | 3.54e-23 | 160 |
presumptive endoderm | 3.54e-23 | 160 |
respiratory primordium | 2.77e-21 | 38 |
endoderm of foregut | 2.77e-21 | 38 |
foregut | 3.27e-18 | 87 |
respiratory tract | 5.48e-15 | 54 |
gastrointestinal system | 1.33e-14 | 25 |
respiratory system | 3.07e-13 | 74 |
intestine | 5.62e-13 | 17 |
upper respiratory tract | 1.68e-12 | 19 |
segment of respiratory tract | 1.68e-12 | 47 |
organ system subdivision | 1.91e-11 | 223 |
small intestine | 8.70e-09 | 4 |
large intestine | 2.69e-08 | 11 |
epithelial bud | 5.12e-08 | 37 |
gallbladder | 1.17e-07 | 3 |
gall bladder primordium | 1.17e-07 | 3 |
biliary system | 6.30e-07 | 9 |
biliary tree | 6.30e-07 | 9 |
biliary bud | 6.30e-07 | 9 |
lung | 9.49e-07 | 22 |
respiratory tube | 9.49e-07 | 22 |
respiration organ | 9.49e-07 | 22 |
pair of lungs | 9.49e-07 | 22 |
lung primordium | 9.49e-07 | 22 |
lung bud | 9.49e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.39e-26 | 106 |
cell type cancer | 1.75e-22 | 143 |
cancer | 2.49e-13 | 235 |
disease of cellular proliferation | 8.25e-13 | 239 |
signet ring cell adenocarcinoma | 9.61e-07 | 2 |