FFCP PHASE1:Hg19::chr14:39703112..39703135,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:39703112..39703135,+ to FFCP PHASE1:Hg19::chr14:39703112..39703135,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117153 | |EntrezGene=117153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18432 | |HGNC=18432 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PC5,G3V3F6 | |UniProt=Q96PC5,G3V3F6 | ||
|association_with_transcript=0bp_to_ENST00000280082,ENST00000555143,NM_054024,uc001wux.2,uc010amy.1_5end | |||
|cluster_id=chr14:39703112..39703135,+ | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_1_at_MIA2_5end | |||
|id=chr14:39703112..39703135,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.87e-13!12;CL:0000417!1.87e-13!12;CL:0000668!1.87e-13!12;CL:0000414!1.87e-13!12;CL:0000412!1.87e-13!12;CL:0000182!1.87e-13!12;CL:0000223!2.55e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.41e-24;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.53e-24,12;CL:0000223,7.65e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;7.09e-34;13!UBERON:0004161;3.77e-26;11!UBERON:0003104;6.62e-26;31!UBERON:0001041;1.73e-19;30!UBERON:0007297;4.53e-10;2!UBERON:0003918;1.76e-07;10!UBERON:0007687;1.76e-07;10!UBERON:0006595;3.11e-07;86!CL:0000223;6.20e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.36e-09!106;DOID:299!2.24e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.58e-09,2;DOID:305,2.19e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004921!5.54e-23!129;UBERON:0004185!5.54e-23!129;UBERON:0009854!2.25e-22!23;UBERON:0008835!1.82e-20!22;UBERON:0003894!1.82e-20!22;UBERON:0009497!2.58e-20!25;UBERON:0000015!2.58e-20!25;UBERON:0002423!2.58e-20!25;UBERON:0006235!2.58e-20!25;UBERON:0004161!2.58e-20!25;UBERON:0009856!2.63e-19!26;UBERON:0001007!2.13e-18!155;UBERON:0001555!2.13e-18!155;UBERON:0007026!2.13e-18!155;UBERON:0005409!2.77e-18!35;UBERON:0004119!5.40e-18!169;UBERON:0000925!5.40e-18!169;UBERON:0006595!5.40e-18!169;UBERON:0007499!1.51e-17!25;UBERON:0005172!1.81e-16!55;UBERON:0005173!1.81e-16!55;UBERON:0003929!1.16e-15!54;UBERON:0000077!5.26e-15!130;UBERON:0000160!5.37e-15!27;UBERON:0002107!6.92e-15!19;UBERON:0006925!6.92e-15!19;UBERON:0008836!6.92e-15!19;UBERON:0002417!2.97e-14!61;UBERON:0000916!2.97e-14!61;UBERON:0005911!7.79e-13!82;UBERON:0005057!6.25e-12!26;UBERON:0001041!3.00e-11!98;UBERON:0005177!7.50e-11!107;UBERON:0003104!1.31e-10!238;UBERON:0009142!1.31e-10!238;UBERON:0000059!1.40e-10!11;UBERON:0000466!1.07e-09!126;UBERON:0006947!2.28e-08!3;UBERON:0004054!2.28e-08!3;UBERON:0000481!2.45e-08!347;UBERON:0004907!2.77e-08!5;UBERON:0009569!4.00e-08!113;UBERON:0002365!4.24e-08!31;UBERON:0002330!4.24e-08!31;UBERON:0006554!1.78e-07!44;UBERON:0002530!2.77e-07!59;UBERON:0001008!3.05e-07!45;UBERON:0001155!4.18e-07!9;UBERON:0001046!5.24e-07!19;UBERON:0000949!6.41e-07!45;UBERON:0002368!6.85e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.37e-33;25!UBERON:0000160;3.62e-24;17!UBERON:0002107;2.45e-23;19!UBERON:0006925;2.45e-23;19!UBERON:0005409;2.92e-22;22!UBERON:0002108;1.25e-15;4!UBERON:0000058;1.93e-15;10!UBERON:0006947;5.27e-14;3!UBERON:0004054;5.27e-14;3!UBERON:0002365;2.97e-13;31!UBERON:0002330;2.97e-13;31!UBERON:0004921;8.50e-13;33!UBERON:0002368;1.68e-11;33!UBERON:0001007;2.85e-11;81!UBERON:0005904;1.25e-10;4!UBERON:0002394;1.66e-10;4!UBERON:0003928;1.66e-10;4!UBERON:0002294;2.42e-10;7!UBERON:0001173;2.42e-10;7!UBERON:0000059;3.13e-10;11!UBERON:0000949;6.26e-10;43!UBERON:0005172;3.02e-09;52!UBERON:0005173;3.02e-09;52!UBERON:0004907;1.60e-08;5!UBERON:0001155;1.93e-08;9!UBERON:0002417;3.93e-07;58!UBERON:0000916;3.93e-07;58!UBERON:0002114;4.74e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.15e-36,23;UBERON:0009497,1.34e-33,25;UBERON:0000015,1.34e-33,25;UBERON:0002423,1.34e-33,25;UBERON:0006235,1.34e-33,25;UBERON:0004161,1.34e-33,25;UBERON:0008835,3.02e-33,22;UBERON:0003894,3.02e-33,22;UBERON:0009856,4.54e-32,26;UBERON:0007499,6.54e-29,25;UBERON:0000160,4.11e-24,17;UBERON:0002107,2.54e-23,19;UBERON:0006925,2.54e-23,19;UBERON:0008836,2.54e-23,19;UBERON:0004921,3.25e-22,118;UBERON:0003929,4.31e-21,54;UBERON:0005409,2.02e-19,25;UBERON:0005172,1.44e-18,54;UBERON:0005173,1.44e-18,54;UBERON:0001007,1.67e-18,145;UBERON:0001555,1.67e-18,145;UBERON:0007026,1.67e-18,145;UBERON:0005911,7.30e-18,82;UBERON:0002417,2.41e-16,60;UBERON:0000916,2.41e-16,60;UBERON:0004119,3.49e-16,160;UBERON:0000925,3.49e-16,160;UBERON:0006595,3.49e-16,160;UBERON:0002108,1.42e-15,4;UBERON:0005177,3.46e-15,101;UBERON:0006947,5.77e-14,3;UBERON:0004054,5.77e-14,3;UBERON:0002365,1.56e-13,31;UBERON:0002330,1.56e-13,31;UBERON:0000949,1.50e-12,45;UBERON:0002368,9.19e-12,35;UBERON:0001041,2.16e-11,87;UBERON:0003104,5.71e-11,160;UBERON:0009142,5.71e-11,160;UBERON:0005904,1.33e-10,4;UBERON:0009569,1.59e-10,112;UBERON:0000059,3.22e-10,11;UBERON:0011216,1.11e-09,223;UBERON:0002100,1.44e-09,199;UBERON:0002530,4.85e-09,59;UBERON:0004907,1.67e-08,5;UBERON:0001155,1.82e-08,9;UBERON:0005256,3.59e-08,122;UBERON:0002294,4.36e-08,9;UBERON:0001173,4.36e-08,9;UBERON:0004912,4.36e-08,9;UBERON:0000058,7.53e-08,19;UBERON:0002394,3.68e-07,6;UBERON:0003928,3.68e-07,6;UBERON:0002114,5.28e-07,2 | |||
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| ||
|short_description=p1@MIA2 | |||
}} | }} |
Latest revision as of 00:20, 20 September 2015
Short description: | p1@MIA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIA2_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_ENST00000280082, ENST00000555143, NM_054024, uc001wux.2, uc010amy.1_5end |
EntrezGene: | MIA2 |
HGNC: | 18432 |
UniProt: | Q96PC5G3V3F6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.53e-24 | 12 |
endodermal cell | 7.65e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.58e-09 | 2 |
carcinoma | 2.19e-07 | 106 |