FFCP PHASE1:Hg19::chr11:65414867..65414886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6494 | |EntrezGene=6494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |HGNC=10885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000531339_5end | |association_with_transcript=30bp_to_ENST00000531339_5end | ||
|cluster_id=chr11:65414867..65414886,+ | |||
|description=CAGE_peak_8_at_SIPA1_5end | |description=CAGE_peak_8_at_SIPA1_5end | ||
|id=chr11:65414867..65414886,+ | |id=chr11:65414867..65414886,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.00e-25!254;CL:0000223!6.59e-11!59;CL:0002076!4.74e-09!43;CL:0002321!2.52e-07!248;CL:0000220!5.19e-07!246 | |ontology_enrichment_celltype=CL:0000066!6.00e-25!254;CL:0000223!6.59e-11!59;CL:0002076!4.74e-09!43;CL:0002321!2.52e-07!248;CL:0000220!5.19e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.43e-15;10!CL:1000494;1.43e-15;10!CL:0002149;2.17e-13;6!CL:0002255;2.17e-13;6!CL:1000497;3.91e-13;17!CL:0002518;3.91e-13;17!CL:1000449;2.95e-12;15!CL:0002681;9.62e-08;12!CL:0002584;9.62e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.58e-19,253;CL:1000507,2.71e-16,10;CL:1000494,2.71e-16,10;CL:1000497,1.35e-13,17;CL:0002518,1.35e-13,17;CL:0002149,1.88e-13,6;CL:0002255,1.88e-13,6;CL:1000449,9.97e-13,15;CL:0000223,1.01e-08,58;CL:0002681,4.12e-08,12;CL:0002584,4.12e-08,12;CL:0000239,5.25e-07,3;CL:1000615,5.25e-07,3;CL:0002306,5.25e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.43e-07;3!UBERON:0003353;2.43e-07;3 | |||
|ontology_enrichment_disease=DOID:305!4.53e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.17e-13;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.88e-13,6;DOID:305,2.34e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000466!1.01e-15!126;UBERON:0000483!1.26e-14!309;UBERON:0000119!1.76e-14!312;UBERON:0000477!5.17e-14!286;UBERON:0000481!5.96e-14!347;UBERON:0004119!3.78e-13!169;UBERON:0000925!3.78e-13!169;UBERON:0006595!3.78e-13!169;UBERON:0000922!4.09e-13!612;UBERON:0000464!2.27e-12!104;UBERON:0000475!3.32e-12!365;UBERON:0005177!3.82e-12!107;UBERON:0000468!8.83e-12!659;UBERON:0002050!1.02e-11!605;UBERON:0005423!1.02e-11!605;UBERON:0000923!1.73e-11!604;UBERON:0005291!1.73e-11!604;UBERON:0006598!1.73e-11!604;UBERON:0002532!1.73e-11!604;UBERON:0005911!3.08e-11!82;UBERON:0000467!5.06e-11!625;UBERON:0004111!6.33e-11!241;UBERON:0000480!7.04e-11!626;UBERON:0000062!1.14e-10!511;UBERON:0000064!2.33e-10!219;UBERON:0001007!5.16e-10!155;UBERON:0001555!5.16e-10!155;UBERON:0007026!5.16e-10!155;UBERON:0000077!9.37e-10!130;UBERON:0000058!1.16e-09!26;UBERON:0009569!3.34e-09!113;UBERON:0002553!1.28e-08!70;UBERON:0005156!2.41e-08!59;UBERON:0000990!2.41e-08!59;UBERON:0000033!2.64e-08!123;UBERON:0005172!3.99e-08!55;UBERON:0005173!3.99e-08!55;UBERON:0002100!4.24e-08!216;UBERON:0000025!6.62e-08!194;UBERON:0003133!6.65e-08!48;UBERON:0003104!9.44e-08!238;UBERON:0009142!9.44e-08!238;UBERON:0002417!9.65e-08!61;UBERON:0000916!9.65e-08!61;UBERON:0000153!1.29e-07!129;UBERON:0007811!1.29e-07!129;UBERON:0001048!1.40e-07!168;UBERON:0001444!1.87e-07!48;UBERON:0003886!2.62e-07!63;UBERON:0004921!2.70e-07!129;UBERON:0004185!2.70e-07!129;UBERON:0003929!3.28e-07!54;UBERON:0001041!6.15e-07!98;UBERON:0000020!9.62e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.43e-15;10!UBERON:0009773;1.43e-15;10!UBERON:0001231;1.43e-15;10!UBERON:0004810;1.43e-15;10!UBERON:0006555;2.95e-12;15!UBERON:0004819;2.95e-12;15!UBERON:0001285;2.95e-12;15!UBERON:0007684;2.95e-12;15!UBERON:0000353;6.89e-10;15!UBERON:0002113;1.47e-08;24!UBERON:0011143;1.47e-08;24!UBERON:0000489;5.68e-08;29!UBERON:0001851;7.05e-08;15!UBERON:0006554;9.50e-08;30!UBERON:0001008;9.50e-08;30!UBERON:0001225;9.62e-08;12!UBERON:0008987;9.62e-08;12!UBERON:0005172;1.37e-07;52!UBERON:0005173;1.37e-07;52!UBERON:0000058;3.85e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.71e-16,10;UBERON:0004211,9.97e-13,15;UBERON:0009773,9.97e-13,15;UBERON:0001231,9.97e-13,15;UBERON:0001285,9.97e-13,15;UBERON:0007684,9.97e-13,15;UBERON:0004208,9.97e-13,15;UBERON:0005172,1.87e-12,54;UBERON:0005173,1.87e-12,54;UBERON:0006554,3.72e-12,47;UBERON:0001008,8.53e-12,48;UBERON:0006555,8.66e-12,16;UBERON:0004819,8.66e-12,16;UBERON:0000058,1.26e-11,19;UBERON:0002530,7.24e-11,59;UBERON:0002417,1.21e-10,60;UBERON:0000916,1.21e-10,60;UBERON:0000353,2.32e-10,15;UBERON:0005177,2.76e-10,101;UBERON:0002113,1.36e-09,26;UBERON:0003918,1.36e-09,26;UBERON:0011143,1.36e-09,26;UBERON:0005095,1.36e-09,26;UBERON:0007687,1.36e-09,26;UBERON:0000489,6.42e-09,31;UBERON:0005911,9.00e-09,82;UBERON:0009569,2.36e-08,112;UBERON:0001851,2.96e-08,15;UBERON:0001225,4.12e-08,12;UBERON:0008987,4.12e-08,12;UBERON:0003929,2.31e-07,54;UBERON:0004175,3.12e-07,25;UBERON:0006853,5.25e-07,3;UBERON:0007685,5.25e-07,3;UBERON:0004134,5.25e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,2.09340350391728,1.31064823278103,0.791300934685361,0.37129905888014,0.994192127183747,0,0,0,0,0.861847406537515,1.83600622119828,0,0.286235987131057,0.410623275218653,0.502170558379211,0,0.0821005894499457,0,0,0,0,1.83884244895785,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.756278537312543,0.886917589850256,1.22968699970376,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,1.69592382577203,0.419499436209906,0,0.626984899610432,0,0.35576626268671,0,0.402829317109147,0,0,0.735326160691737,0,0.982297011124877,0.673588117878509,0.563057402416611,3.06633274931766,0,0.916008719652036,0,0,0.436094052142534,0,0,0,0,0,0,0,0.49333509683432,0,0.404132016209064,0,0.605429710579726,1.15235184896,0,1.24864030732128,0,0,0,0,0,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0,2.87447256726495,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,0,0.640672166455702,0,0,0,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0.573609190778008,0.487894824518382,0.397589304964456,0.348581828608555,0.621966330092223,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,2.80483547606892,0.4115740113314,0,1.26755034821831,2.94848165003288,1.18157981336281,0,0.860919069801795,0.514703430895577,0.219500570817251,0,0.301586917234893,0.0925884451585296,0.325808305310325,0,2.88662684050547,1.15930404975077,0.469634776943287,0,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0,0.560655421726804,0,0,0,0,0,0,0,0,1.41849132023278,0.799266537048298,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0,0,0.601892199455438,0,2.0694614258501,1.32845119707087,0.368738337083406,0,0.979005787313703,0.343143423810856,0,0.215714200818617,0,2.12189300012382,4.99306318531491,0.604780586659361,0,0,0,0,0,0.804269605718038,0,0,0,0,0,0,1.45031339509947,0.40101294060657,0.276242966807689,0,0,0,0.451199612907412,1.92538342761037,3.13739907670742,1.46139224653261,1.26661954671451,0,0,0.431831832204279,0,1.35473218771926,8.02703638167765,1.52925763827023,1.66215201785745,1.56712328305525,0,0,0.512900250232778,1.31205858279882,0,1.75169719801128,0,0,0,0,1.6068392984416,0.386682873168488,0,0.307007349452259,0.551346289938122,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.826424576804891,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0.532306030317022,0,0.55597265731176,0.143124886741991,0.372158369359667,0.632758849437452,0.953150969619124,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,0,0.405820753925408,0.6196469961995,0,0,0.294747123039363,1.07001315444375,0,1.26664581178598,0.658589785919804,1.13841952129715,1.39973888097993,0.0962221127255121,0.670302275535787,0,1.12972560932135,0.86101074534246,0,2.66058092122005,0.918893600827838,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,2.37571744666111,0.307160702099232,0.994147647766298,0.281338832821026,3.00533503561846,0,0.211125408127993,0,0,0.503865495708552,0.511343412510774,0,0,1.16828856491525,0.537063524026827,0,0.493217028184668,0,0,0.969332746095218,0.0927680981618513,0,0,1.31189999994294,1.44999915086959,1.0241410345695,2.2882828526349,1.65471377237555,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0.557694977114413,0.153900517007594,0,0,0,0.108647371922008,0.638002319463839,1.28236630762607,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0.706765357169704,0,0,0.353830258013357,0.611030144933625,0,0,0,0.404406797884062,0,0,0,0.391329237864179,0.485560759068186,4.3404284313433,1.20990716048664,0,0.126373159256976,0,0,0,0,0.313932918407225,3.58417289318877,5.12297182853627,1.38674673013139,2.95051555169723,0.293977192243133,0.522355239482415,0.698906672968121,0,0,0,0,1.26085721434945,0,0.90392296312213,0,0,0,0.586654148204409,2.08412932653988,0.85381197895741,1.79828648623917,0.864542502924636,0.572682980829578,2.57392496792947,0,0.124252535565433,0.707082103850386,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,1.87012214878023,0,0,0.681017030557878,0.803765742325096,1.10031549277787,0,0,0,0.364497339948148,0,0.55163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| ||
|short_description=p8@SIPA1 | |short_description=p8@SIPA1 | ||
}} | }} |
Latest revision as of 10:32, 19 September 2015
Short description: | p8@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SIPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000531339_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.58e-19 | 253 |
kidney tubule cell | 2.71e-16 | 10 |
nephron tubule epithelial cell | 2.71e-16 | 10 |
kidney cell | 1.35e-13 | 17 |
kidney epithelial cell | 1.35e-13 | 17 |
epithelial cell of uterus | 1.88e-13 | 6 |
stromal cell of endometrium | 1.88e-13 | 6 |
epithelial cell of nephron | 9.97e-13 | 15 |
endodermal cell | 1.01e-08 | 58 |
kidney cortical cell | 4.12e-08 | 12 |
renal cortical epithelial cell | 4.12e-08 | 12 |
brush border epithelial cell | 5.25e-07 | 3 |
kidney cortex tubule cell | 5.25e-07 | 3 |
epithelial cell of proximal tubule | 5.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.71e-16 | 10 |
nephron epithelium | 9.97e-13 | 15 |
renal tubule | 9.97e-13 | 15 |
nephron tubule | 9.97e-13 | 15 |
nephron | 9.97e-13 | 15 |
uriniferous tubule | 9.97e-13 | 15 |
nephrogenic mesenchyme | 9.97e-13 | 15 |
abdomen element | 1.87e-12 | 54 |
abdominal segment element | 1.87e-12 | 54 |
urinary system structure | 3.72e-12 | 47 |
renal system | 8.53e-12 | 48 |
excretory tube | 8.66e-12 | 16 |
kidney epithelium | 8.66e-12 | 16 |
duct | 1.26e-11 | 19 |
gland | 7.24e-11 | 59 |
abdominal segment of trunk | 1.21e-10 | 60 |
abdomen | 1.21e-10 | 60 |
parenchyma | 2.32e-10 | 15 |
trunk region element | 2.76e-10 | 101 |
kidney | 1.36e-09 | 26 |
kidney mesenchyme | 1.36e-09 | 26 |
upper urinary tract | 1.36e-09 | 26 |
kidney rudiment | 1.36e-09 | 26 |
kidney field | 1.36e-09 | 26 |
cavitated compound organ | 6.42e-09 | 31 |
endo-epithelium | 9.00e-09 | 82 |
subdivision of trunk | 2.36e-08 | 112 |
cortex | 2.96e-08 | 15 |
cortex of kidney | 4.12e-08 | 12 |
renal parenchyma | 4.12e-08 | 12 |
gut epithelium | 2.31e-07 | 54 |
internal genitalia | 3.12e-07 | 25 |
renal cortex tubule | 5.25e-07 | 3 |
region of nephron tubule | 5.25e-07 | 3 |
proximal tubule | 5.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.88e-13 | 6 |
carcinoma | 2.34e-09 | 106 |