FFCP PHASE1:Hg19::chr11:65414867..65414886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6494 | |EntrezGene=6494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |HGNC=10885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000531339_5end | |association_with_transcript=30bp_to_ENST00000531339_5end | ||
|cluster_id=chr11:65414867..65414886,+ | |||
|description=CAGE_peak_8_at_SIPA1_5end | |description=CAGE_peak_8_at_SIPA1_5end | ||
|id=chr11:65414867..65414886,+ | |id=chr11:65414867..65414886,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.00e-25!254;CL:0000223!6.59e-11!59;CL:0002076!4.74e-09!43;CL:0002321!2.52e-07!248;CL:0000220!5.19e-07!246 | |ontology_enrichment_celltype=CL:0000066!6.00e-25!254;CL:0000223!6.59e-11!59;CL:0002076!4.74e-09!43;CL:0002321!2.52e-07!248;CL:0000220!5.19e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.43e-15;10!CL:1000494;1.43e-15;10!CL:0002149;2.17e-13;6!CL:0002255;2.17e-13;6!CL:1000497;3.91e-13;17!CL:0002518;3.91e-13;17!CL:1000449;2.95e-12;15!CL:0002681;9.62e-08;12!CL:0002584;9.62e-08;12 | |ontology_enrichment_celltype_v019=CL:1000507;1.43e-15;10!CL:1000494;1.43e-15;10!CL:0002149;2.17e-13;6!CL:0002255;2.17e-13;6!CL:1000497;3.91e-13;17!CL:0002518;3.91e-13;17!CL:1000449;2.95e-12;15!CL:0002681;9.62e-08;12!CL:0002584;9.62e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.58e-19,253;CL:1000507,2.71e-16,10;CL:1000494,2.71e-16,10;CL:1000497,1.35e-13,17;CL:0002518,1.35e-13,17;CL:0002149,1.88e-13,6;CL:0002255,1.88e-13,6;CL:1000449,9.97e-13,15;CL:0000223,1.01e-08,58;CL:0002681,4.12e-08,12;CL:0002584,4.12e-08,12;CL:0000239,5.25e-07,3;CL:1000615,5.25e-07,3;CL:0002306,5.25e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.43e-07;3!UBERON:0003353;2.43e-07;3 | |ontology_enrichment_development_v019=UBERON:0009847;2.43e-07;3!UBERON:0003353;2.43e-07;3 | ||
|ontology_enrichment_disease=DOID:305!4.53e-08!106 | |ontology_enrichment_disease=DOID:305!4.53e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3001;2.17e-13;6 | |ontology_enrichment_disease_v019=DOID:3001;2.17e-13;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,1.88e-13,6;DOID:305,2.34e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000466!1.01e-15!126;UBERON:0000483!1.26e-14!309;UBERON:0000119!1.76e-14!312;UBERON:0000477!5.17e-14!286;UBERON:0000481!5.96e-14!347;UBERON:0004119!3.78e-13!169;UBERON:0000925!3.78e-13!169;UBERON:0006595!3.78e-13!169;UBERON:0000922!4.09e-13!612;UBERON:0000464!2.27e-12!104;UBERON:0000475!3.32e-12!365;UBERON:0005177!3.82e-12!107;UBERON:0000468!8.83e-12!659;UBERON:0002050!1.02e-11!605;UBERON:0005423!1.02e-11!605;UBERON:0000923!1.73e-11!604;UBERON:0005291!1.73e-11!604;UBERON:0006598!1.73e-11!604;UBERON:0002532!1.73e-11!604;UBERON:0005911!3.08e-11!82;UBERON:0000467!5.06e-11!625;UBERON:0004111!6.33e-11!241;UBERON:0000480!7.04e-11!626;UBERON:0000062!1.14e-10!511;UBERON:0000064!2.33e-10!219;UBERON:0001007!5.16e-10!155;UBERON:0001555!5.16e-10!155;UBERON:0007026!5.16e-10!155;UBERON:0000077!9.37e-10!130;UBERON:0000058!1.16e-09!26;UBERON:0009569!3.34e-09!113;UBERON:0002553!1.28e-08!70;UBERON:0005156!2.41e-08!59;UBERON:0000990!2.41e-08!59;UBERON:0000033!2.64e-08!123;UBERON:0005172!3.99e-08!55;UBERON:0005173!3.99e-08!55;UBERON:0002100!4.24e-08!216;UBERON:0000025!6.62e-08!194;UBERON:0003133!6.65e-08!48;UBERON:0003104!9.44e-08!238;UBERON:0009142!9.44e-08!238;UBERON:0002417!9.65e-08!61;UBERON:0000916!9.65e-08!61;UBERON:0000153!1.29e-07!129;UBERON:0007811!1.29e-07!129;UBERON:0001048!1.40e-07!168;UBERON:0001444!1.87e-07!48;UBERON:0003886!2.62e-07!63;UBERON:0004921!2.70e-07!129;UBERON:0004185!2.70e-07!129;UBERON:0003929!3.28e-07!54;UBERON:0001041!6.15e-07!98;UBERON:0000020!9.62e-07!23 | |ontology_enrichment_uberon=UBERON:0000466!1.01e-15!126;UBERON:0000483!1.26e-14!309;UBERON:0000119!1.76e-14!312;UBERON:0000477!5.17e-14!286;UBERON:0000481!5.96e-14!347;UBERON:0004119!3.78e-13!169;UBERON:0000925!3.78e-13!169;UBERON:0006595!3.78e-13!169;UBERON:0000922!4.09e-13!612;UBERON:0000464!2.27e-12!104;UBERON:0000475!3.32e-12!365;UBERON:0005177!3.82e-12!107;UBERON:0000468!8.83e-12!659;UBERON:0002050!1.02e-11!605;UBERON:0005423!1.02e-11!605;UBERON:0000923!1.73e-11!604;UBERON:0005291!1.73e-11!604;UBERON:0006598!1.73e-11!604;UBERON:0002532!1.73e-11!604;UBERON:0005911!3.08e-11!82;UBERON:0000467!5.06e-11!625;UBERON:0004111!6.33e-11!241;UBERON:0000480!7.04e-11!626;UBERON:0000062!1.14e-10!511;UBERON:0000064!2.33e-10!219;UBERON:0001007!5.16e-10!155;UBERON:0001555!5.16e-10!155;UBERON:0007026!5.16e-10!155;UBERON:0000077!9.37e-10!130;UBERON:0000058!1.16e-09!26;UBERON:0009569!3.34e-09!113;UBERON:0002553!1.28e-08!70;UBERON:0005156!2.41e-08!59;UBERON:0000990!2.41e-08!59;UBERON:0000033!2.64e-08!123;UBERON:0005172!3.99e-08!55;UBERON:0005173!3.99e-08!55;UBERON:0002100!4.24e-08!216;UBERON:0000025!6.62e-08!194;UBERON:0003133!6.65e-08!48;UBERON:0003104!9.44e-08!238;UBERON:0009142!9.44e-08!238;UBERON:0002417!9.65e-08!61;UBERON:0000916!9.65e-08!61;UBERON:0000153!1.29e-07!129;UBERON:0007811!1.29e-07!129;UBERON:0001048!1.40e-07!168;UBERON:0001444!1.87e-07!48;UBERON:0003886!2.62e-07!63;UBERON:0004921!2.70e-07!129;UBERON:0004185!2.70e-07!129;UBERON:0003929!3.28e-07!54;UBERON:0001041!6.15e-07!98;UBERON:0000020!9.62e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.43e-15;10!UBERON:0009773;1.43e-15;10!UBERON:0001231;1.43e-15;10!UBERON:0004810;1.43e-15;10!UBERON:0006555;2.95e-12;15!UBERON:0004819;2.95e-12;15!UBERON:0001285;2.95e-12;15!UBERON:0007684;2.95e-12;15!UBERON:0000353;6.89e-10;15!UBERON:0002113;1.47e-08;24!UBERON:0011143;1.47e-08;24!UBERON:0000489;5.68e-08;29!UBERON:0001851;7.05e-08;15!UBERON:0006554;9.50e-08;30!UBERON:0001008;9.50e-08;30!UBERON:0001225;9.62e-08;12!UBERON:0008987;9.62e-08;12!UBERON:0005172;1.37e-07;52!UBERON:0005173;1.37e-07;52!UBERON:0000058;3.85e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.43e-15;10!UBERON:0009773;1.43e-15;10!UBERON:0001231;1.43e-15;10!UBERON:0004810;1.43e-15;10!UBERON:0006555;2.95e-12;15!UBERON:0004819;2.95e-12;15!UBERON:0001285;2.95e-12;15!UBERON:0007684;2.95e-12;15!UBERON:0000353;6.89e-10;15!UBERON:0002113;1.47e-08;24!UBERON:0011143;1.47e-08;24!UBERON:0000489;5.68e-08;29!UBERON:0001851;7.05e-08;15!UBERON:0006554;9.50e-08;30!UBERON:0001008;9.50e-08;30!UBERON:0001225;9.62e-08;12!UBERON:0008987;9.62e-08;12!UBERON:0005172;1.37e-07;52!UBERON:0005173;1.37e-07;52!UBERON:0000058;3.85e-07;10 | ||
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| ||
|short_description=p8@SIPA1 | |short_description=p8@SIPA1 | ||
}} | }} |
Latest revision as of 10:32, 19 September 2015
Short description: | p8@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SIPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000531339_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.58e-19 | 253 |
kidney tubule cell | 2.71e-16 | 10 |
nephron tubule epithelial cell | 2.71e-16 | 10 |
kidney cell | 1.35e-13 | 17 |
kidney epithelial cell | 1.35e-13 | 17 |
epithelial cell of uterus | 1.88e-13 | 6 |
stromal cell of endometrium | 1.88e-13 | 6 |
epithelial cell of nephron | 9.97e-13 | 15 |
endodermal cell | 1.01e-08 | 58 |
kidney cortical cell | 4.12e-08 | 12 |
renal cortical epithelial cell | 4.12e-08 | 12 |
brush border epithelial cell | 5.25e-07 | 3 |
kidney cortex tubule cell | 5.25e-07 | 3 |
epithelial cell of proximal tubule | 5.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.71e-16 | 10 |
nephron epithelium | 9.97e-13 | 15 |
renal tubule | 9.97e-13 | 15 |
nephron tubule | 9.97e-13 | 15 |
nephron | 9.97e-13 | 15 |
uriniferous tubule | 9.97e-13 | 15 |
nephrogenic mesenchyme | 9.97e-13 | 15 |
abdomen element | 1.87e-12 | 54 |
abdominal segment element | 1.87e-12 | 54 |
urinary system structure | 3.72e-12 | 47 |
renal system | 8.53e-12 | 48 |
excretory tube | 8.66e-12 | 16 |
kidney epithelium | 8.66e-12 | 16 |
duct | 1.26e-11 | 19 |
gland | 7.24e-11 | 59 |
abdominal segment of trunk | 1.21e-10 | 60 |
abdomen | 1.21e-10 | 60 |
parenchyma | 2.32e-10 | 15 |
trunk region element | 2.76e-10 | 101 |
kidney | 1.36e-09 | 26 |
kidney mesenchyme | 1.36e-09 | 26 |
upper urinary tract | 1.36e-09 | 26 |
kidney rudiment | 1.36e-09 | 26 |
kidney field | 1.36e-09 | 26 |
cavitated compound organ | 6.42e-09 | 31 |
endo-epithelium | 9.00e-09 | 82 |
subdivision of trunk | 2.36e-08 | 112 |
cortex | 2.96e-08 | 15 |
cortex of kidney | 4.12e-08 | 12 |
renal parenchyma | 4.12e-08 | 12 |
gut epithelium | 2.31e-07 | 54 |
internal genitalia | 3.12e-07 | 25 |
renal cortex tubule | 5.25e-07 | 3 |
region of nephron tubule | 5.25e-07 | 3 |
proximal tubule | 5.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.88e-13 | 6 |
carcinoma | 2.34e-09 | 106 |