FFCP PHASE1:Hg19::chr2:201243006..201243024,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:201243006..201243024,+ to FFCP PHASE1:Hg19::chr2:201243006..201243024,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26010 | |EntrezGene=26010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |HGNC=24574 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZ02 | |UniProt=F8VZ02 | ||
|association_with_transcript=46bp_to_ENST00000449647_5end | |||
|cluster_id=chr2:201243006..201243024,+ | |||
|description=CAGE_peak_9_at_SPATS2L_5end | |||
|id=chr2:201243006..201243024,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000159;8.70e-09;2!CL:0000322;5.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,7.11e-09,2;CL:0000322,5.94e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.95e-08;30!UBERON:0006595;3.61e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.47e-18!106;DOID:0050687!2.55e-18!143;DOID:162!1.21e-10!235;DOID:14566!1.25e-10!239;DOID:299!3.66e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;6.78e-15;25!DOID:3910;4.66e-10;2!DOID:4929;6.75e-10;2!DOID:3493;1.73e-09;2!DOID:3119;3.17e-07;14!DOID:1324;3.47e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.18e-16,143;DOID:299,7.06e-15,25;DOID:305,9.29e-14,106;DOID:162,1.39e-12,235;DOID:14566,3.67e-12,239;DOID:3910,4.77e-10,2;DOID:4929,6.76e-10,2;DOID:3493,1.81e-09,2;DOID:3119,3.42e-07,14;DOID:1324,3.56e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.25e-13!155;UBERON:0001555!6.25e-13!155;UBERON:0007026!6.25e-13!155;UBERON:0004921!1.27e-12!129;UBERON:0004185!1.27e-12!129;UBERON:0004119!3.33e-11!169;UBERON:0000925!3.33e-11!169;UBERON:0006595!3.33e-11!169;UBERON:0002294!6.31e-11!7;UBERON:0001173!6.31e-11!7;UBERON:0004912!6.31e-11!7;UBERON:0005409!2.19e-10!35;UBERON:0000160!8.78e-10!27;UBERON:0000077!2.76e-09!130;UBERON:0003104!1.08e-08!238;UBERON:0009142!1.08e-08!238;UBERON:0000466!1.38e-08!126;UBERON:0005911!2.22e-08!82;UBERON:0005177!4.34e-08!107;UBERON:0000464!1.88e-07!104;UBERON:0000058!4.12e-07!26;UBERON:0000481!6.87e-07!347;UBERON:0002394!7.65e-07!4;UBERON:0003928!7.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.21e-28;22!UBERON:0000160;1.40e-21;17!UBERON:0004921;1.00e-18;33!UBERON:0002294;2.03e-15;7!UBERON:0001173;2.03e-15;7!UBERON:0002108;3.80e-14;4!UBERON:0000058;7.55e-11;10!UBERON:0002394;2.19e-10;4!UBERON:0003928;2.19e-10;4!UBERON:0009856;2.68e-10;4!UBERON:0004903;4.66e-10;2!UBERON:0002173;4.66e-10;2!UBERON:0002186;4.66e-10;2!UBERON:0000059;3.58e-09;11!UBERON:0000945;4.13e-08;5!UBERON:0010039;4.13e-08;5!UBERON:0004907;8.94e-08;5!UBERON:0001155;1.91e-07;9!UBERON:0004821;5.85e-07;3!UBERON:0007499;5.85e-07;3!UBERON:0003215;5.85e-07;3!UBERON:0010368;5.85e-07;3!UBERON:0009911;5.85e-07;3!UBERON:0002299;5.85e-07;3!UBERON:0006524;5.85e-07;3!UBERON:0008874;5.85e-07;3!UBERON:0002169;5.85e-07;3!UBERON:0004894;5.85e-07;3!UBERON:0001555;8.85e-07;54!UBERON:0002114;9.10e-07;2!UBERON:0002110;9.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.88e-24,25;UBERON:0000160,1.64e-21,17;UBERON:0004921,1.59e-14,118;UBERON:0002108,3.68e-14,4;UBERON:0001007,3.02e-13,145;UBERON:0001555,3.02e-13,145;UBERON:0007026,3.02e-13,145;UBERON:0002294,6.09e-12,9;UBERON:0001173,6.09e-12,9;UBERON:0004912,6.09e-12,9;UBERON:0004119,1.91e-11,160;UBERON:0000925,1.91e-11,160;UBERON:0006595,1.91e-11,160;UBERON:0004903,4.77e-10,2;UBERON:0002173,4.77e-10,2;UBERON:0002186,4.77e-10,2;UBERON:0000059,4.02e-09,11;UBERON:0004907,1.09e-07,5;UBERON:0001155,2.16e-07,9;UBERON:0005911,4.31e-07,82;UBERON:0002394,4.67e-07,6;UBERON:0003928,4.67e-07,6;UBERON:0009856,4.74e-07,26;UBERON:0004821,5.94e-07,3;UBERON:0003215,5.94e-07,3;UBERON:0010368,5.94e-07,3;UBERON:0009911,5.94e-07,3;UBERON:0002299,5.94e-07,3;UBERON:0006524,5.94e-07,3;UBERON:0008874,5.94e-07,3;UBERON:0002169,5.94e-07,3;UBERON:0004894,5.94e-07,3;UBERON:0002110,9.10e-07,3;UBERON:0002114,9.10e-07,2;UBERON:0006242,9.10e-07,3 | |||
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| ||
|short_description=p9@SPATS2L | |||
}} | }} |
Latest revision as of 10:23, 19 September 2015
Short description: | p9@SPATS2L |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SPATS2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000449647_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | F8VZ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 7.11e-09 | 2 |
pneumocyte | 5.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.88e-24 | 25 |
intestine | 1.64e-21 | 17 |
subdivision of digestive tract | 1.59e-14 | 118 |
small intestine | 3.68e-14 | 4 |
digestive system | 3.02e-13 | 145 |
digestive tract | 3.02e-13 | 145 |
primitive gut | 3.02e-13 | 145 |
biliary system | 6.09e-12 | 9 |
biliary tree | 6.09e-12 | 9 |
biliary bud | 6.09e-12 | 9 |
endoderm-derived structure | 1.91e-11 | 160 |
endoderm | 1.91e-11 | 160 |
presumptive endoderm | 1.91e-11 | 160 |
bronchoalveolar duct junction | 4.77e-10 | 2 |
alveolar duct | 4.77e-10 | 2 |
bronchiole | 4.77e-10 | 2 |
large intestine | 4.02e-09 | 11 |
lower digestive tract | 1.09e-07 | 5 |
colon | 2.16e-07 | 9 |
endo-epithelium | 4.31e-07 | 82 |
bile duct | 4.67e-07 | 6 |
digestive system duct | 4.67e-07 | 6 |
sac | 4.74e-07 | 26 |
pulmonary alveolus epithelium | 5.94e-07 | 3 |
alveolus | 5.94e-07 | 3 |
pulmonary lobule | 5.94e-07 | 3 |
lobule | 5.94e-07 | 3 |
alveolus of lung | 5.94e-07 | 3 |
alveolar system | 5.94e-07 | 3 |
pulmonary acinus | 5.94e-07 | 3 |
alveolar sac | 5.94e-07 | 3 |
alveolar wall | 5.94e-07 | 3 |
gallbladder | 9.10e-07 | 3 |
duodenum | 9.10e-07 | 2 |
gall bladder primordium | 9.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.18e-16 | 143 |
adenocarcinoma | 7.06e-15 | 25 |
carcinoma | 9.29e-14 | 106 |
cancer | 1.39e-12 | 235 |
disease of cellular proliferation | 3.67e-12 | 239 |
lung adenocarcinoma | 4.77e-10 | 2 |
tubular adenocarcinoma | 6.76e-10 | 2 |
signet ring cell adenocarcinoma | 1.81e-09 | 2 |
gastrointestinal system cancer | 3.42e-07 | 14 |
lung cancer | 3.56e-07 | 15 |