FFCP PHASE1:Hg19::chr15:78913306..78913349,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:78913306..78913349,-
|short_description=p1@CHRNA3
|description=CAGE_peak_1_at_CHRNA3_5end
|association_with_transcript=0bp_to_uc002bea.2,uc002beb.2,uc002b...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1136 | |EntrezGene=1136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1957 | |HGNC=1957 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002bea.2,uc002beb.2,uc002bec.2_5end | |||
|cluster_id=chr15:78913306..78913349,- | |||
|coexpression_cluster_id=C1753 | |||
|description=CAGE_peak_1_at_CHRNA3_5end | |||
|id=chr15:78913306..78913349,- | |||
|ontology_enrichment_celltype=CL:0000540!8.94e-07!6;CL:0000031!8.94e-07!6;CL:0000404!8.94e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.66e-09;3!CL:0000147;1.52e-08;14!CL:0002322;2.87e-08;5!CL:0002321;3.08e-08;15!CL:0000123;2.94e-07;2!CL:0000242;2.94e-07;2!CL:0000149;4.62e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.59e-09,3;CL:0000147,1.78e-08,14;CL:0002322,3.38e-08,5;CL:0000242,2.90e-07,2;CL:0000149,4.53e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.85e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.59e-30!86;UBERON:0007284!1.59e-30!86;UBERON:0007023!2.34e-30!115;UBERON:0005743!2.78e-30!86;UBERON:0000073!4.34e-30!94;UBERON:0001016!4.34e-30!94;UBERON:0002346!2.70e-28!90;UBERON:0001017!2.11e-26!82;UBERON:0001049!5.84e-23!57;UBERON:0005068!5.84e-23!57;UBERON:0006241!5.84e-23!57;UBERON:0007135!5.84e-23!57;UBERON:0000955!1.05e-20!69;UBERON:0006238!1.05e-20!69;UBERON:0004121!2.14e-20!169;UBERON:0000924!2.19e-19!173;UBERON:0006601!2.19e-19!173;UBERON:0002616!2.73e-19!59;UBERON:0003056!3.57e-19!61;UBERON:0000153!2.91e-18!129;UBERON:0007811!2.91e-18!129;UBERON:0000033!2.91e-16!123;UBERON:0003080!2.14e-14!42;UBERON:0002780!1.07e-13!41;UBERON:0001890!1.07e-13!41;UBERON:0006240!1.07e-13!41;UBERON:0000064!2.51e-10!219;UBERON:0003076!2.77e-10!15;UBERON:0003057!2.77e-10!15;UBERON:0004733!6.60e-10!12;UBERON:0002028!6.60e-10!12;UBERON:0007277!6.60e-10!12;UBERON:0001894!2.31e-09!7;UBERON:0006222!2.31e-09!7;UBERON:0004732!6.51e-09!13;UBERON:0000062!8.95e-09!511;UBERON:0000922!1.57e-08!612;UBERON:0000481!2.50e-08!347;UBERON:0005409!2.67e-08!35;UBERON:0002020!3.60e-08!34;UBERON:0003528!3.60e-08!34;UBERON:0001893!4.57e-08!34;UBERON:0007625!4.64e-08!11;UBERON:0000063!5.81e-08!97;UBERON:0001869!7.28e-08!32;UBERON:0002791!1.33e-07!33;UBERON:0000966!1.96e-07!5;UBERON:0005388!1.96e-07!5;UBERON:0001802!1.96e-07!5;UBERON:0000468!1.98e-07!659;UBERON:0002680!2.75e-07!9;UBERON:0001895!2.75e-07!9;UBERON:0010092!2.75e-07!9;UBERON:0000970!6.28e-07!20;UBERON:0003135!8.24e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-14;5!UBERON:0005388;1.50e-14;5!UBERON:0001802;1.50e-14;5!UBERON:0001894;3.21e-14;7!UBERON:0003296;1.12e-11;4!UBERON:0010133;1.12e-11;4!UBERON:0005409;1.20e-10;22!UBERON:0000369;1.24e-10;4!UBERON:0002435;1.24e-10;4!UBERON:0000204;1.24e-10;4!UBERON:0000970;6.10e-10;20!UBERON:0000922;1.48e-09;49!UBERON:0002104;2.21e-09;21!UBERON:0001781;2.66e-09;3!UBERON:0001782;2.66e-09;3!UBERON:0000160;4.58e-09;17!UBERON:0007625;1.43e-08;11!UBERON:0005383;1.79e-08;3!UBERON:0005382;1.79e-08;3!UBERON:0000020;2.05e-08;23!UBERON:0000019;3.12e-08;19!UBERON:0000047;3.12e-08;19!UBERON:0004088;3.12e-08;19!UBERON:0010230;3.12e-08;19!UBERON:0000073;5.02e-08;53!UBERON:0002616;5.02e-08;53!UBERON:0001032;5.43e-08;24!UBERON:0004456;5.43e-08;24!UBERON:0002784;1.71e-07;4!UBERON:0001905;2.11e-07;2!UBERON:0002757;2.11e-07;2!UBERON:0010134;2.11e-07;2!UBERON:0005408;2.11e-07;2!UBERON:0001899;2.11e-07;2!UBERON:0001456;2.58e-07;21!UBERON:0002370;3.07e-07;2!UBERON:0005058;3.07e-07;2!UBERON:0009113;3.07e-07;2!UBERON:0002420;3.48e-07;9!UBERON:0007245;3.48e-07;9!UBERON:0010009;3.48e-07;9!UBERON:0010011;3.48e-07;9!UBERON:0000454;3.48e-07;9!UBERON:0000125;5.66e-07;9!UBERON:0002308;5.66e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,3.69e-17,82;UBERON:0007284,3.69e-17,82;UBERON:0002346,4.83e-16,86;UBERON:0010371,1.19e-14,104;UBERON:0001894,2.40e-14,7;UBERON:0006222,2.40e-14,7;UBERON:0003056,2.83e-14,61;UBERON:0001016,3.65e-12,89;UBERON:0000966,4.40e-12,6;UBERON:0005388,4.40e-12,6;UBERON:0001802,4.40e-12,6;UBERON:0000073,6.47e-12,53;UBERON:0002616,6.47e-12,53;UBERON:0003296,7.49e-12,4;UBERON:0010133,7.49e-12,4;UBERON:0001049,4.67e-11,56;UBERON:0005068,4.67e-11,56;UBERON:0006241,4.67e-11,56;UBERON:0007135,4.67e-11,56;UBERON:0000369,1.14e-10,4;UBERON:0002435,1.14e-10,4;UBERON:0000204,1.14e-10,4;UBERON:0010082,1.14e-10,4;UBERON:0004121,1.50e-10,171;UBERON:0000924,1.50e-10,171;UBERON:0006601,1.50e-10,171;UBERON:0000955,1.83e-10,68;UBERON:0006238,1.83e-10,68;UBERON:0001017,4.21e-10,81;UBERON:0011216,1.66e-09,223;UBERON:0000970,1.96e-09,21;UBERON:0002104,1.96e-09,21;UBERON:0001782,2.59e-09,3;UBERON:0005424,2.59e-09,3;UBERON:0005409,3.72e-09,25;UBERON:0000160,4.77e-09,17;UBERON:0010314,5.56e-09,132;UBERON:0007023,8.71e-09,114;UBERON:0007625,1.25e-08,11;UBERON:0005383,1.77e-08,3;UBERON:0005382,1.77e-08,3;UBERON:0002780,4.00e-08,41;UBERON:0001890,4.00e-08,41;UBERON:0003080,4.00e-08,41;UBERON:0006240,4.00e-08,41;UBERON:0000020,4.91e-08,24;UBERON:0001032,4.91e-08,24;UBERON:0004456,4.91e-08,24;UBERON:0000019,8.49e-08,20;UBERON:0000047,8.49e-08,20;UBERON:0010312,8.49e-08,20;UBERON:0004088,8.49e-08,20;UBERON:0010230,8.49e-08,20;UBERON:0003072,8.49e-08,20;UBERON:0004128,8.49e-08,20;UBERON:0003071,8.49e-08,20;UBERON:0002784,1.87e-07,4;UBERON:0001905,2.15e-07,2;UBERON:0002757,2.15e-07,2;UBERON:0010134,2.15e-07,2;UBERON:0005408,2.15e-07,2;UBERON:0001899,2.15e-07,2;UBERON:0002420,3.22e-07,9;UBERON:0007245,3.22e-07,9;UBERON:0010009,3.22e-07,9;UBERON:0010011,3.22e-07,9;UBERON:0000454,3.22e-07,9;UBERON:0001781,4.53e-07,4;UBERON:0000125,5.78e-07,9;UBERON:0002308,5.78e-07,9;UBERON:0001456,5.80e-07,22 | |||
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| ||
|short_description=p1@CHRNA3 | |||
}} | }} |
Latest revision as of 07:11, 19 September 2015
Short description: | p1@CHRNA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHRNA3_5end |
Coexpression cluster: | C1753_neuroblastoma_pineal_rectum_retina_merkel_carcinosarcoma_eye |
Association with transcript: | 0bp_to_uc002bea.2, uc002beb.2, uc002bec.2_5end |
EntrezGene: | CHRNA3 |
HGNC: | 1957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.59e-09 | 3 |
pigment cell | 1.78e-08 | 14 |
embryonic stem cell | 3.38e-08 | 5 |
Merkel cell | 2.90e-07 | 2 |
visual pigment cell | 4.53e-07 | 4 |