FFCP PHASE1:Hg19::chr19:49844028..49844043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q8N843 | |UniProt=Q8N843 | ||
|association_with_transcript=-469bp_to_ENST00000358234,uc002pnb.1_5end | |association_with_transcript=-469bp_to_ENST00000358234,uc002pnb.1_5end | ||
|cluster_id=chr19:49844028..49844043,- | |||
|description=CAGE_peak_2_at_ENST00000358234_5end,CAGE_peak_2_at_uc002pnb.1_5end | |description=CAGE_peak_2_at_ENST00000358234_5end,CAGE_peak_2_at_uc002pnb.1_5end | ||
|id=chr19:49844028..49844043,- | |id=chr19:49844028..49844043,- | ||
|ontology_enrichment_celltype=CL:0002321!7.49e-14!248;CL:0000220!2.57e-13!246;CL:0000055!4.20e-13!180;CL:0000183!3.87e-10!59;CL:0000393!5.12e-10!60;CL:0000211!5.12e-10!60;CL:0000222!4.65e-09!119;CL:0000187!7.76e-08!54;CL:0000680!1.01e-07!57;CL:0000056!1.01e-07!57;CL:0000355!1.01e-07!57 | |ontology_enrichment_celltype=CL:0002321!7.49e-14!248;CL:0000220!2.57e-13!246;CL:0000055!4.20e-13!180;CL:0000183!3.87e-10!59;CL:0000393!5.12e-10!60;CL:0000211!5.12e-10!60;CL:0000222!4.65e-09!119;CL:0000187!7.76e-08!54;CL:0000680!1.01e-07!57;CL:0000056!1.01e-07!57;CL:0000355!1.01e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:1000746;8.44e-10;7!CL:1000612;8.44e-10;7!CL:0002681;2.65e-09;12!CL:0002584;2.65e-09;12!CL:0000669;3.09e-08;4!CL:1000449;4.05e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.19e-10,250;CL:1000746,3.11e-10,7;CL:1000612,3.11e-10,7;CL:0002681,1.56e-09,12;CL:0002584,1.56e-09,12;CL:0000669,2.50e-08,4;CL:0002078,2.83e-08,45;CL:0000222,6.73e-08,121;CL:1000449,2.70e-07,15;CL:0000115,3.60e-07,36;CL:0002188,7.99e-07,5;CL:0002603,8.55e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.63e-11!118;UBERON:0002049!1.43e-10!79;UBERON:0007798!1.43e-10!79;UBERON:0000119!5.04e-10!312;UBERON:0002100!1.28e-09!216;UBERON:0000483!1.51e-09!309;UBERON:0000490!2.53e-09!138;UBERON:0000055!5.76e-09!69;UBERON:0005256!6.04e-09!143;UBERON:0000481!8.06e-09!347;UBERON:0003104!1.13e-08!238;UBERON:0009142!1.13e-08!238;UBERON:0000468!1.48e-08!659;UBERON:0004872!1.57e-08!84;UBERON:0001981!3.29e-08!60;UBERON:0007500!3.29e-08!60;UBERON:0004537!3.29e-08!60;UBERON:0006965!3.29e-08!60;UBERON:0001134!4.82e-08!61;UBERON:0002036!4.82e-08!61;UBERON:0003082!4.82e-08!61;UBERON:0001009!6.09e-08!113;UBERON:0000477!8.49e-08!286;UBERON:0004535!9.26e-08!110;UBERON:0002385!1.26e-07!63;UBERON:0001015!1.26e-07!63;UBERON:0000383!1.26e-07!63;UBERON:0000475!1.66e-07!365;UBERON:0004290!2.18e-07!70;UBERON:0000486!3.69e-07!82;UBERON:0004111!5.03e-07!241;UBERON:0000914!6.23e-07!83;UBERON:0002329!6.23e-07!83;UBERON:0003077!6.23e-07!83;UBERON:0003059!6.23e-07!83;UBERON:0007282!6.23e-07!83;UBERON:0009618!6.23e-07!83;UBERON:0007285!6.23e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;8.44e-10;7!UBERON:0001229;8.44e-10;7!UBERON:0001225;2.65e-09;12!UBERON:0008987;2.65e-09;12!UBERON:0001851;3.27e-09;15!UBERON:0006555;4.05e-07;15!UBERON:0000353;4.05e-07;15!UBERON:0004819;4.05e-07;15!UBERON:0001285;4.05e-07;15!UBERON:0007684;4.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.02e-10,117;UBERON:0010532,3.11e-10,7;UBERON:0000074,3.11e-10,7;UBERON:0001229,3.11e-10,7;UBERON:0001230,3.11e-10,7;UBERON:0003220,3.11e-10,7;UBERON:0005749,3.11e-10,7;UBERON:0004199,3.11e-10,7;UBERON:0004209,3.11e-10,7;UBERON:0004198,3.11e-10,7;UBERON:0001225,1.56e-09,12;UBERON:0008987,1.56e-09,12;UBERON:0001851,2.12e-09,15;UBERON:0005103,7.86e-09,8;UBERON:0000083,7.86e-09,8;UBERON:0009201,7.86e-09,8;UBERON:0006553,7.86e-09,8;UBERON:0003074,7.86e-09,8;UBERON:0003060,7.86e-09,8;UBERON:0000055,1.82e-08,68;UBERON:0002049,2.31e-08,78;UBERON:0007798,2.31e-08,78;UBERON:0007503,4.38e-08,78;UBERON:0000080,9.66e-08,9;UBERON:0002120,9.66e-08,9;UBERON:0004875,9.66e-08,9;UBERON:0005721,9.66e-08,9;UBERON:0005754,9.66e-08,9;UBERON:0007297,9.66e-08,9;UBERON:0004211,2.70e-07,15;UBERON:0009773,2.70e-07,15;UBERON:0000353,2.70e-07,15;UBERON:0001231,2.70e-07,15;UBERON:0001285,2.70e-07,15;UBERON:0007684,2.70e-07,15;UBERON:0004208,2.70e-07,15;UBERON:0007500,9.27e-07,59;UBERON:0001981,9.27e-07,59;UBERON:0004537,9.27e-07,59;UBERON:0006965,9.27e-07,59;UBERON:0006555,9.70e-07,16;UBERON:0004819,9.70e-07,16 | |||
|phase1_expression=1.09007027562334,0.856402095563933,0.140954404095971,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0.491467873003018,3.48900583986214,0,0,0.74259811776028,0,0.672325146451775,1.80808358407193,2.19093027116212,1.95173119516203,2.83178433576612,1.63200552995402,1.88072832886853,0.286235987131057,1.36874425072884,0.87879847716362,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,0.800791974072025,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0.361439152384566,0,0.724232594804119,0,0,1.60709189178915,2.4390233720882,0.351339142772504,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0.993812036833525,0,1.04142150482278,0.56530794192401,0,3.02629846134074,0.417989933073621,1.03366703667732,0.35576626268671,0,2.41697590265488,0.760272105718513,0.732186172644509,2.20597848207521,0,0.892997282840798,0.673588117878509,0.112611480483322,1.53316637465883,1.89853131913626,1.46561395144326,0,0,0,0.993943903390637,0.633152558322899,0,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.404132016209064,1.30769522490767,0.756787138224657,0,0.234321431833797,0,0,0.747243402759005,0.469737994575059,0.647491777472526,0.140450806702248,0,0.737005903870608,0.103325781175765,0,1.48360157567134,0,1.43723628363248,1.5150250255866,0.125118519871964,0,0.438977620880838,0.30648779579902,0.751190294532984,1.36118619792025,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.584622030967192,0,0.552299391853796,0.484938170456436,0.355009592516614,0.604512589365842,0.508681776931463,1.15956511897978,0.818238361772504,0,0.609868530647977,1.45782745153634,1.74290914304278,0.932949495138334,1.51392510525377,3.28479623168247,0,1.28648187638577,0,0,0.721879481669586,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,0.871517776369625,0.237270619111097,0.404493924480493,0,0,0.738155454624648,0,1.2347220339942,0,0,1.96565443335525,1.18157981336281,0,0,0.514703430895577,0.439001141634502,0,0.301586917234893,0.370353780634118,0,0,1.44331342025273,0.695582429850461,0.234817388471643,1.44366447761074,2.31492756288305,0.951270761172991,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.317489471460845,0.763976851116555,1.17217447210047,0,0.411309970813294,0.901029173531752,0.285826432630578,0.672786506072164,0.43596006883328,0.7333828582095,0.904902010304444,0,0.845302752556,0.26593811658487,1.04007436911366,1.28603687131071,0,0.799266537048298,0.714889968290738,0.542621605391443,1.64648067356154,0.65147236858747,0,0.791951872933429,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0.76228387266739,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,1.08506009479894,0.831883446123229,0.178428988797162,0.630809660135739,0.117141414992713,0.300946099727719,2.27407504055985,0,0.664225598535437,0.184369168541703,0.60818530127658,2.15381273209015,1.37257369524342,0,0,0,2.42502057157008,0,0.907170879989041,0.496215615637554,0.306923946576125,0.561320188866147,0.384417447767103,0,0.160853921143607,1.48418066444991,0.462629081407967,0,0.0821271560138091,0,0.464841513839837,0,0.40101294060657,0.0920809889358963,0.459257792658427,0.546273504020151,0.786746489756545,1.35359883872224,0.847168708148562,0,0,0.73886140225013,2.27466768141793,1.70093705276516,0,1.54227252690289,1.62567862526312,3.51182841698397,0.509752546090077,0,2.0148727924996,0,0,0.769350375349168,1.31205858279882,0.650756789328606,0.309123034943167,1.37354197227515,1.65018999841176,0.574265537996172,0,0,1.25671933779759,0.462145851343933,0.921022048356777,1.10269257987624,0.644521469209642,1.0151168573996,0.340906509664404,0.801288320820636,0.661139661443912,0,0,0.10115778085555,0,0,0.6970372701606,0.616067160352178,2.12922412126809,0,0.55597265731176,0.286249773483982,0.744316738719335,0.632758849437452,0.190630193923825,0.511795582622668,0.42793898803392,0.318203247925937,0,0.359744915166629,1.09814811894422,0.471249609382746,1.81964233415984,0,1.68503382495592,0.975267478179181,0.487426979262569,0,0.682499557039929,0.707027159768564,2.26016233240486,2.2054613741845,0.66343897524122,0,1.15755106853338,0,0.811641507850816,0.92947049429925,1.40847801266121,0.143411352204052,0.392996164052485,1.07001315444375,0.354761064070598,0.211107635297664,0,0,0.699869440489966,1.53955380360819,0,0,0.376575203107117,0,0,0,0.689170200620878,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.427296284509893,0,0.735120647943095,0.185803175125719,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.728163130497081,0,0.852408440419239,0,0,0,0,0.140669416410513,0,0,2.5335048975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| ||
|short_description=p2@ENST00000358234,p2@uc002pnb.1 | |short_description=p2@ENST00000358234,p2@uc002pnb.1 | ||
}} | }} |
Latest revision as of 06:51, 19 September 2015
Short description: | p2@ENST00000358234, p2@uc002pnb.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000358234_5end, CAGE_peak_2_at_uc002pnb.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -469bp_to_ENST00000358234, uc002pnb.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.19e-10 | 250 |
glomerular cell | 3.11e-10 | 7 |
kidney corpuscule cell | 3.11e-10 | 7 |
kidney cortical cell | 1.56e-09 | 12 |
renal cortical epithelial cell | 1.56e-09 | 12 |
pericyte cell | 2.50e-08 | 4 |
meso-epithelial cell | 2.83e-08 | 45 |
mesodermal cell | 6.73e-08 | 121 |
epithelial cell of nephron | 2.70e-07 | 15 |
endothelial cell | 3.60e-07 | 36 |
glomerular endothelial cell | 7.99e-07 | 5 |
astrocyte of the cerebellum | 8.55e-07 | 3 |