FFCP PHASE1:Hg19::chr21:39628655..39628672,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6261 | |||
|TSSclassifier=strong | |||
|UniProt=Q99712,A8MTZ5,A8MVK1,C9JTX1 | |||
|association_with_transcript=0bp_to_ENST00000328656,ENST00000398925,ENST00000398928,ENST00000443341,NM_002243,uc002ywv.2_5end | |||
|cluster_id=chr21:39628655..39628672,+ | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_2_at_KCNJ15_5end | |||
|id=chr21:39628655..39628672,+ | |||
|ontology_enrichment_celltype=CL:1000449!7.85e-21!16;CL:1000507!1.71e-19!12;CL:1000494!1.71e-19!12;CL:1000497!3.18e-18!18;CL:0002518!3.18e-18!18;CL:0002681!1.72e-13!13;CL:0002584!1.72e-13!13;CL:0000239!1.01e-09!3;CL:1000615!1.01e-09!3;CL:0002306!1.01e-09!3;CL:1000612!7.47e-07!7;CL:1000746!7.47e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.53e-40;10!CL:1000494;1.53e-40;10!CL:1000449;1.13e-26;15!CL:1000497;2.09e-23;17!CL:0002518;2.09e-23;17!CL:0000650;1.01e-13;2!CL:1000500;1.01e-13;2!CL:1000618;1.01e-13;2!CL:1001318;1.01e-13;2!CL:0002173;1.01e-13;2!CL:0002681;3.06e-13;12!CL:0002584;3.06e-13;12!CL:0000239;1.90e-09;3!CL:1000615;1.90e-09;3!CL:0002306;1.90e-09;3!CL:0000775;2.62e-09;3!CL:1001319;1.35e-07;1!CL:1000600;1.35e-07;1!CL:0000669;2.71e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.62e-40,10;CL:1000494,1.62e-40,10;CL:1000449,1.17e-26,15;CL:1000497,2.15e-23,17;CL:0002518,2.15e-23,17;CL:0000650,1.04e-13,2;CL:1000500,1.04e-13,2;CL:1000618,1.04e-13,2;CL:1001318,1.04e-13,2;CL:0002173,1.04e-13,2;CL:0002681,3.14e-13,12;CL:0002584,3.14e-13,12;CL:0000239,1.94e-09,3;CL:1000615,1.94e-09,3;CL:0002306,1.94e-09,3;CL:0000775,2.21e-09,3;CL:1001319,1.87e-07,1;CL:1000600,1.87e-07,1;CL:0000669,2.75e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.91e-14;2!UBERON:0006242;3.32e-08;1!UBERON:0005754;6.52e-08;1!UBERON:0008801;1.35e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000080!6.83e-26!18;UBERON:0002120!6.83e-26!18;UBERON:0004875!6.83e-26!18;UBERON:0005721!6.83e-26!18;UBERON:0005754!6.83e-26!18;UBERON:0007297!6.83e-26!18;UBERON:0003887!6.12e-25!21;UBERON:0000489!2.35e-23!32;UBERON:0006555!2.38e-23!17;UBERON:0005103!2.38e-23!17;UBERON:0000083!2.38e-23!17;UBERON:0009201!2.38e-23!17;UBERON:0004819!2.38e-23!17;UBERON:0006553!2.38e-23!17;UBERON:0003074!2.38e-23!17;UBERON:0003060!2.38e-23!17;UBERON:0004876!5.78e-23!20;UBERON:0002113!3.85e-22!27;UBERON:0003918!3.85e-22!27;UBERON:0005095!3.85e-22!27;UBERON:0007687!3.85e-22!27;UBERON:0004211!7.85e-21!16;UBERON:0001285!7.85e-21!16;UBERON:0007684!7.85e-21!16;UBERON:0003220!7.85e-21!16;UBERON:0004208!7.85e-21!16;UBERON:0006554!7.18e-20!44;UBERON:0000058!1.01e-19!26;UBERON:0009773!1.71e-19!12;UBERON:0001231!1.71e-19!12;UBERON:0004810!1.71e-19!12;UBERON:0001008!2.59e-19!45;UBERON:0003064!4.35e-19!37;UBERON:0005172!4.73e-15!55;UBERON:0005173!4.73e-15!55;UBERON:0001225!1.72e-13!13;UBERON:0008987!1.72e-13!13;UBERON:0005177!2.73e-13!107;UBERON:0002553!2.74e-13!70;UBERON:0002417!4.46e-13!61;UBERON:0000916!4.46e-13!61;UBERON:0000464!2.08e-12!104;UBERON:0003886!2.97e-12!63;UBERON:0000466!4.53e-11!126;UBERON:0003103!8.77e-11!69;UBERON:0001851!1.11e-10!16;UBERON:0006947!5.60e-10!3;UBERON:0004054!5.60e-10!3;UBERON:0000353!5.76e-10!17;UBERON:0006853!1.01e-09!3;UBERON:0007685!1.01e-09!3;UBERON:0004134!1.01e-09!3;UBERON:0009569!4.66e-09!113;UBERON:0005904!1.45e-07!4;UBERON:0000074!7.47e-07!7;UBERON:0001229!7.47e-07!7;UBERON:0001230!7.47e-07!7;UBERON:0005749!7.47e-07!7;UBERON:0004199!7.47e-07!7;UBERON:0004209!7.47e-07!7;UBERON:0004198!7.47e-07!7;UBERON:0003104!8.27e-07!238;UBERON:0009142!8.27e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.53e-40;10!UBERON:0009773;1.53e-40;10!UBERON:0001231;1.53e-40;10!UBERON:0004810;1.53e-40;10!UBERON:0006555;1.13e-26;15!UBERON:0004819;1.13e-26;15!UBERON:0001285;1.13e-26;15!UBERON:0007684;1.13e-26;15!UBERON:0002113;1.02e-25;24!UBERON:0011143;1.02e-25;24!UBERON:0000489;2.49e-25;29!UBERON:0006554;2.02e-24;30!UBERON:0001008;2.02e-24;30!UBERON:0006947;5.34e-20;3!UBERON:0004054;5.34e-20;3!UBERON:0005904;3.79e-15;4!UBERON:0003567;1.01e-13;2!UBERON:0003838;1.01e-13;2!UBERON:0003586;1.01e-13;2!UBERON:0005169;1.01e-13;2!UBERON:0002321;1.01e-13;2!UBERON:0005215;1.01e-13;2!UBERON:0002303;1.01e-13;2!UBERON:0002319;1.01e-13;2!UBERON:0005172;2.85e-13;52!UBERON:0005173;2.85e-13;52!UBERON:0001225;3.06e-13;12!UBERON:0008987;3.06e-13;12!UBERON:0001851;1.48e-10;15!UBERON:0000353;1.48e-10;15!UBERON:0006853;1.90e-09;3!UBERON:0007685;1.90e-09;3!UBERON:0004134;1.90e-09;3!UBERON:0002417;6.46e-09;58!UBERON:0000916;6.46e-09;58!UBERON:0002171;4.35e-08;1!UBERON:0006518;4.35e-08;1!UBERON:0008949;4.35e-08;1!UBERON:0000101;4.35e-08;1!UBERON:0002167;4.35e-08;1!UBERON:0000998;6.52e-08;1!UBERON:0001301;6.52e-08;1!UBERON:0006868;6.52e-08;1!UBERON:0005177;7.47e-08;99!UBERON:0001000;1.35e-07;1!UBERON:0001831;1.35e-07;1!UBERON:0004645;1.35e-07;1!UBERON:0005352;1.35e-07;1!UBERON:0001256;1.35e-07;1!UBERON:0001567;1.35e-07;1!UBERON:0001259;1.35e-07;1!UBERON:0003891;2.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.62e-40,10;UBERON:0002113,4.08e-34,26;UBERON:0003918,4.08e-34,26;UBERON:0011143,4.08e-34,26;UBERON:0005095,4.08e-34,26;UBERON:0007687,4.08e-34,26;UBERON:0000489,4.45e-33,31;UBERON:0006555,1.51e-31,16;UBERON:0004819,1.51e-31,16;UBERON:0004211,1.17e-26,15;UBERON:0009773,1.17e-26,15;UBERON:0001231,1.17e-26,15;UBERON:0001285,1.17e-26,15;UBERON:0007684,1.17e-26,15;UBERON:0004208,1.17e-26,15;UBERON:0005172,3.18e-24,54;UBERON:0005173,3.18e-24,54;UBERON:0005177,6.91e-22,101;UBERON:0002417,1.68e-21,60;UBERON:0000916,1.68e-21,60;UBERON:0006554,5.82e-21,47;UBERON:0001008,1.80e-20,48;UBERON:0006947,6.09e-20,3;UBERON:0004054,6.09e-20,3;UBERON:0009569,2.65e-15,112;UBERON:0005904,4.18e-15,4;UBERON:0003103,1.04e-13,68;UBERON:0003567,1.04e-13,2;UBERON:0003838,1.04e-13,2;UBERON:0003586,1.04e-13,2;UBERON:0005169,1.04e-13,2;UBERON:0002321,1.04e-13,2;UBERON:0005215,1.04e-13,2;UBERON:0002303,1.04e-13,2;UBERON:0002319,1.04e-13,2;UBERON:0001225,3.14e-13,12;UBERON:0008987,3.14e-13,12;UBERON:0000080,1.07e-11,9;UBERON:0002120,1.07e-11,9;UBERON:0004875,1.07e-11,9;UBERON:0005721,1.07e-11,9;UBERON:0005754,1.07e-11,9;UBERON:0007297,1.07e-11,9;UBERON:0001851,1.51e-10,15;UBERON:0000353,1.51e-10,15;UBERON:0004876,1.35e-09,11;UBERON:0006853,1.94e-09,3;UBERON:0007685,1.94e-09,3;UBERON:0004134,1.94e-09,3;UBERON:0002100,4.01e-09,199;UBERON:0003887,8.35e-09,12;UBERON:0000058,2.88e-08,19;UBERON:0002171,4.35e-08,1;UBERON:0006518,4.35e-08,1;UBERON:0008949,4.35e-08,1;UBERON:0000101,4.35e-08,1;UBERON:0002167,4.35e-08,1;UBERON:0001301,6.10e-08,1;UBERON:0000998,6.97e-08,1;UBERON:0006868,6.97e-08,1;UBERON:0005103,8.63e-08,8;UBERON:0000083,8.63e-08,8;UBERON:0009201,8.63e-08,8;UBERON:0006553,8.63e-08,8;UBERON:0003074,8.63e-08,8;UBERON:0003060,8.63e-08,8;UBERON:0001000,1.54e-07,1;UBERON:0005352,1.54e-07,1;UBERON:0001831,1.75e-07,1;UBERON:0001567,1.75e-07,1;UBERON:0008801,1.75e-07,1;UBERON:0004645,1.87e-07,1;UBERON:0001256,1.87e-07,1;UBERON:0001259,1.87e-07,1;UBERON:0003891,2.75e-07,4;UBERON:0003104,3.28e-07,160;UBERON:0009142,3.28e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.376484679085209,0,0,0.306083892370903,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8330535432639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,7.08541101360616,5.49044838423799,5.84556898613043,41.0595836393286,0,0,0.215915916102139,0,1.35473218771926,2.00675909541941,1.27438136522519,0.831076008928724,2.0148727924996,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71762004253481,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,28.8161542898126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,129.083748556087,143.14857102041,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,0,0,0,0,0,3.20362237703084,19.3361295272589,14.912605992499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61234733458304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,22.6639063257597,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,4.23387050190929,0,0,0,0,0,1.82876887473404,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,9.49437304720472,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0.426467963801962,0.476128862927481,0,0.0620747142958579,0,0,0.808468755832877,0,0,0,0.0717222053926763,0.332660356546013,1.05824249194267,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@KCNJ15 | |||
}} |
Latest revision as of 09:40, 18 September 2015
Short description: | p2@KCNJ15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNJ15_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 0bp_to_ENST00000328656, ENST00000398925, ENST00000398928, ENST00000443341, NM_002243, uc002ywv.2_5end |
EntrezGene: | KCNJ15 |
HGNC: | 6261 |
UniProt: | Q99712A8MTZ5A8MVK1C9JTX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.62e-40 | 10 |
nephron tubule epithelial cell | 1.62e-40 | 10 |
epithelial cell of nephron | 1.17e-26 | 15 |
kidney cell | 2.15e-23 | 17 |
kidney epithelial cell | 2.15e-23 | 17 |
mesangial cell | 1.04e-13 | 2 |
kidney interstitial cell | 1.04e-13 | 2 |
juxtaglomerular complex cell | 1.04e-13 | 2 |
renal interstitial pericyte | 1.04e-13 | 2 |
extraglomerular mesangial cell | 1.04e-13 | 2 |
kidney cortical cell | 3.14e-13 | 12 |
renal cortical epithelial cell | 3.14e-13 | 12 |
brush border epithelial cell | 1.94e-09 | 3 |
kidney cortex tubule cell | 1.94e-09 | 3 |
epithelial cell of proximal tubule | 1.94e-09 | 3 |
neutrophil | 2.21e-09 | 3 |
bladder cell | 1.87e-07 | 1 |
lower urinary tract cell | 1.87e-07 | 1 |
pericyte cell | 2.75e-07 | 4 |