FFCP PHASE1:Hg19::chr1:16482554..16482576,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:16482554..16482576,-
|short_description=p1@EPHA2
|description=CAGE_peak_1_at_EPHA2_5end
|association_with_transcript=0bp_to_uc001aya.1,uc010oca.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1969 | |EntrezGene=1969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3386 | |HGNC=3386 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001aya.1,uc010oca.1_5end | |||
|cluster_id=chr1:16482554..16482576,- | |||
|coexpression_cluster_id=C3898 | |||
|description=CAGE_peak_1_at_EPHA2_5end | |||
|id=chr1:16482554..16482576,- | |||
|ontology_enrichment_celltype=CL:0000066!2.66e-54!254;CL:0000220!3.28e-33!246;CL:0002321!7.56e-33!248;CL:0000076!6.39e-18!62;CL:0000222!1.76e-16!119;CL:0000213!5.65e-16!57;CL:0000215!5.65e-16!57;CL:0002078!2.51e-14!44;CL:0000115!4.84e-13!35;CL:0002139!7.91e-13!24;CL:0000223!4.52e-12!59;CL:0002076!4.20e-11!43;CL:0000071!2.69e-10!18;CL:0002546!2.69e-10!18;CL:1000497!1.36e-09!18;CL:0002518!1.36e-09!18;CL:1000449!6.87e-09!16;CL:0000548!1.16e-08!679;CL:0000004!1.16e-08!679;CL:0000255!1.16e-08!679;CL:0000012!5.50e-08!682;CL:0002368!8.84e-08!13;CL:0002681!2.09e-07!13;CL:0002584!2.09e-07!13;CL:1000507!9.42e-07!12;CL:1000494!9.42e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.21e-13;24!CL:0000115;9.77e-12;36!CL:0000071;2.00e-10;18!CL:0000213;3.56e-10;58!CL:0000215;3.56e-10;58!CL:0002078;4.56e-10;45!CL:1000497;4.85e-10;17!CL:0002518;4.85e-10;17!CL:1000449;2.38e-09;15!CL:0000076;4.73e-09;63!CL:0002076;9.83e-09;42!CL:0002368;7.00e-08;13!CL:0002681;7.68e-08;12!CL:0002584;7.68e-08;12!CL:0002202;9.14e-07;9!CL:0002632;9.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.25e-55,253;CL:0002321,1.99e-33,250;CL:0000076,9.79e-18,63;CL:0000222,3.15e-17,121;CL:0000213,7.08e-17,58;CL:0000215,7.08e-17,58;CL:0002078,3.17e-15,45;CL:0000115,6.12e-14,36;CL:0002139,5.47e-13,24;CL:0000223,1.46e-12,58;CL:0002076,9.15e-12,42;CL:0000071,2.02e-10,18;CL:0002546,2.02e-10,18;CL:1000497,4.74e-10,17;CL:0002518,4.74e-10,17;CL:1000449,2.38e-09,15;CL:0002368,7.21e-08,13;CL:0002681,7.57e-08,12;CL:0002584,7.57e-08,12;CL:0002202,9.23e-07,9;CL:0002632,9.23e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.00e-10;18!CL:0000223;6.65e-07;58 | |||
|ontology_enrichment_disease=DOID:305!5.50e-12!106;DOID:0050687!9.71e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.06e-12,106;DOID:0050687,3.57e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0003914!8.53e-20!118;UBERON:0003104!5.76e-18!238;UBERON:0009142!5.76e-18!238;UBERON:0000468!1.91e-17!659;UBERON:0000481!3.28e-17!347;UBERON:0000119!8.11e-17!312;UBERON:0000467!1.21e-16!625;UBERON:0000480!2.65e-16!626;UBERON:0002049!3.12e-16!79;UBERON:0007798!3.12e-16!79;UBERON:0000483!3.30e-16!309;UBERON:0001048!6.51e-16!168;UBERON:0004119!5.72e-15!169;UBERON:0000925!5.72e-15!169;UBERON:0006595!5.72e-15!169;UBERON:0000477!1.88e-14!286;UBERON:0000466!2.98e-14!126;UBERON:0002100!6.59e-14!216;UBERON:0005177!9.44e-14!107;UBERON:0000055!1.83e-13!69;UBERON:0004111!3.60e-13!241;UBERON:0000490!6.90e-13!138;UBERON:0000922!1.41e-12!612;UBERON:0002050!2.71e-12!605;UBERON:0005423!2.71e-12!605;UBERON:0000475!3.01e-12!365;UBERON:0000923!3.41e-12!604;UBERON:0005291!3.41e-12!604;UBERON:0006598!3.41e-12!604;UBERON:0002532!3.41e-12!604;UBERON:0000464!7.45e-12!104;UBERON:0001007!1.42e-11!155;UBERON:0001555!1.42e-11!155;UBERON:0007026!1.42e-11!155;UBERON:0001981!2.61e-11!60;UBERON:0007500!2.61e-11!60;UBERON:0004537!2.61e-11!60;UBERON:0006965!2.61e-11!60;UBERON:0000077!3.60e-11!130;UBERON:0009569!5.42e-11!113;UBERON:0000487!5.54e-11!22;UBERON:0004921!1.80e-10!129;UBERON:0004185!1.80e-10!129;UBERON:0001041!2.15e-10!98;UBERON:0001986!2.69e-10!18;UBERON:0004638!2.69e-10!18;UBERON:0004852!2.69e-10!18;UBERON:0004872!3.56e-10!84;UBERON:0006554!1.31e-09!44;UBERON:0001008!1.33e-09!45;UBERON:0006914!2.11e-09!25;UBERON:0005085!3.45e-09!29;UBERON:0005256!3.51e-09!143;UBERON:0001009!5.06e-09!113;UBERON:0004535!5.75e-09!110;UBERON:0004211!6.87e-09!16;UBERON:0001285!6.87e-09!16;UBERON:0007684!6.87e-09!16;UBERON:0003220!6.87e-09!16;UBERON:0004208!6.87e-09!16;UBERON:0000025!8.77e-09!194;UBERON:0003103!1.39e-08!69;UBERON:0000064!1.45e-08!219;UBERON:0000058!1.90e-08!26;UBERON:0000926!2.52e-08!448;UBERON:0004120!2.52e-08!448;UBERON:0006603!2.52e-08!448;UBERON:0000062!2.85e-08!511;UBERON:0006555!3.47e-08!17;UBERON:0005103!3.47e-08!17;UBERON:0000083!3.47e-08!17;UBERON:0009201!3.47e-08!17;UBERON:0004819!3.47e-08!17;UBERON:0006553!3.47e-08!17;UBERON:0003074!3.47e-08!17;UBERON:0003060!3.47e-08!17;UBERON:0000353!3.74e-08!17;UBERON:0005911!4.25e-08!82;UBERON:0005172!5.50e-08!55;UBERON:0005173!5.50e-08!55;UBERON:0001851!6.70e-08!16;UBERON:0003064!9.96e-08!37;UBERON:0002553!1.30e-07!70;UBERON:0000080!1.73e-07!18;UBERON:0002120!1.73e-07!18;UBERON:0004875!1.73e-07!18;UBERON:0005721!1.73e-07!18;UBERON:0005754!1.73e-07!18;UBERON:0007297!1.73e-07!18;UBERON:0000020!1.74e-07!23;UBERON:0001225!2.09e-07!13;UBERON:0008987!2.09e-07!13;UBERON:0002113!2.25e-07!27;UBERON:0003918!2.25e-07!27;UBERON:0005095!2.25e-07!27;UBERON:0007687!2.25e-07!27;UBERON:0000063!2.57e-07!97;UBERON:0000019!2.61e-07!19;UBERON:0000047!2.61e-07!19;UBERON:0004088!2.61e-07!19;UBERON:0003072!2.61e-07!19;UBERON:0003071!2.61e-07!19;UBERON:0004128!2.61e-07!19;UBERON:0001637!3.05e-07!42;UBERON:0003509!3.05e-07!42;UBERON:0004572!3.05e-07!42;UBERON:0000970!3.31e-07!20;UBERON:0001444!4.03e-07!48;UBERON:0001801!4.58e-07!14;UBERON:0001032!4.82e-07!24;UBERON:0004456!4.82e-07!24;UBERON:0000489!5.11e-07!32;UBERON:0003886!5.86e-07!63;UBERON:0002417!6.33e-07!61;UBERON:0000916!6.33e-07!61;UBERON:0001004!6.64e-07!72;UBERON:0004876!8.44e-07!20;UBERON:0001456!9.30e-07!21;UBERON:0009773!9.42e-07!12;UBERON:0001231!9.42e-07!12;UBERON:0004810!9.42e-07!12;UBERON:0002104!9.83e-07!21 | |||
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| ||
|short_description=p1@EPHA2 | |||
}} | }} |
Latest revision as of 09:38, 18 September 2015
Short description: | p1@EPHA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPHA2_5end |
Coexpression cluster: | C3898_Alveolar_immature_serous_Bronchial_Tracheal_Keratinocyte_embryonic |
Association with transcript: | 0bp_to_uc001aya.1, uc010oca.1_5end |
EntrezGene: | EPHA2 |
HGNC: | 3386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.25e-55 | 253 |
embryonic cell | 1.99e-33 | 250 |
squamous epithelial cell | 9.79e-18 | 63 |
mesodermal cell | 3.15e-17 | 121 |
lining cell | 7.08e-17 | 58 |
barrier cell | 7.08e-17 | 58 |
meso-epithelial cell | 3.17e-15 | 45 |
endothelial cell | 6.12e-14 | 36 |
endothelial cell of vascular tree | 5.47e-13 | 24 |
endodermal cell | 1.46e-12 | 58 |
endo-epithelial cell | 9.15e-12 | 42 |
blood vessel endothelial cell | 2.02e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.02e-10 | 18 |
kidney cell | 4.74e-10 | 17 |
kidney epithelial cell | 4.74e-10 | 17 |
epithelial cell of nephron | 2.38e-09 | 15 |
respiratory epithelial cell | 7.21e-08 | 13 |
kidney cortical cell | 7.57e-08 | 12 |
renal cortical epithelial cell | 7.57e-08 | 12 |
epithelial cell of tracheobronchial tree | 9.23e-07 | 9 |
epithelial cell of lower respiratory tract | 9.23e-07 | 9 |
Ontology term | p-value | n |
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