FFCP PHASE1:Hg19::chr1:43824791..43824802,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:43824791..43824802,+ to FFCP PHASE1:Hg19::chr1:43824791..43824802,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=991 | |EntrezGene=991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1723 | |HGNC=1723 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=99bp_to_uc001ciy.2_5end | |||
|cluster_id=chr1:43824791..43824802,+ | |||
|description=CAGE_peak_4_at_CDC20_5end | |||
|id=chr1:43824791..43824802,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.15e-25!679;CL:0000004!1.15e-25!679;CL:0000255!1.15e-25!679;CL:0000012!3.54e-25!682;CL:0002321!2.71e-21!248;CL:0000066!4.69e-21!254;CL:0000220!2.15e-20!246;CL:0000055!1.34e-16!180;CL:0000144!3.35e-16!625;CL:0000222!4.07e-16!119;CL:0000003!1.10e-15!722;CL:0002371!6.17e-13!591;CL:0000213!2.97e-12!57;CL:0000215!2.97e-12!57;CL:0002078!4.63e-12!44;CL:0000115!2.88e-10!35;CL:0000076!1.20e-09!62;CL:0000063!1.05e-08!578;CL:1000449!4.41e-08!16;CL:0002139!4.44e-08!24;CL:0000071!7.82e-08!18;CL:0002546!7.82e-08!18;CL:0000057!2.41e-07!75;CL:1000497!4.98e-07!18;CL:0002518!4.98e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.20e-13;15!CL:0000115;1.83e-11;36!CL:1000497;1.95e-11;17!CL:0002518;1.95e-11;17!CL:0002681;2.23e-11;12!CL:0002584;2.23e-11;12!CL:1000507;4.83e-09;10!CL:1000494;4.83e-09;10!CL:0002078;6.21e-09;45!CL:0002139;1.91e-08;24!CL:0000071;1.99e-08;18!CL:0000213;3.26e-08;58!CL:0000215;3.26e-08;58!CL:1000746;6.94e-08;7!CL:1000612;6.94e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,6.88e-15,45;CL:0000213,3.05e-14,58;CL:0000215,3.05e-14,58;CL:0000222,3.41e-14,121;CL:0000115,4.48e-14,36;CL:1000449,1.53e-13,15;CL:0002321,1.83e-13,250;CL:0000066,2.08e-11,253;CL:1000497,2.39e-11,17;CL:0002518,2.39e-11,17;CL:0002681,2.52e-11,12;CL:0002584,2.52e-11,12;CL:1000507,6.11e-09,10;CL:1000494,6.11e-09,10;CL:0002139,6.16e-09,24;CL:0000071,6.65e-09,18;CL:0002546,6.65e-09,18;CL:1000746,6.42e-08,7;CL:1000612,6.42e-08,7;CL:0000076,1.25e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.99e-08;18 | |||
|ontology_enrichment_disease=DOID:162!4.36e-09!235;DOID:14566!3.38e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.55e-08!118;UBERON:0004211!4.41e-08!16;UBERON:0001285!4.41e-08!16;UBERON:0007684!4.41e-08!16;UBERON:0003220!4.41e-08!16;UBERON:0004208!4.41e-08!16;UBERON:0001986!7.82e-08!18;UBERON:0004638!7.82e-08!18;UBERON:0004852!7.82e-08!18;UBERON:0000487!8.48e-08!22;UBERON:0003104!1.00e-07!238;UBERON:0009142!1.00e-07!238;UBERON:0005256!1.07e-07!143;UBERON:0001851!1.20e-07!16;UBERON:0006914!2.98e-07!25;UBERON:0002049!3.81e-07!79;UBERON:0007798!3.81e-07!79;UBERON:0006555!3.87e-07!17;UBERON:0005103!3.87e-07!17;UBERON:0000083!3.87e-07!17;UBERON:0009201!3.87e-07!17;UBERON:0004819!3.87e-07!17;UBERON:0006553!3.87e-07!17;UBERON:0003074!3.87e-07!17;UBERON:0003060!3.87e-07!17;UBERON:0006554!5.83e-07!44;UBERON:0000490!7.89e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.20e-13;15!UBERON:0004819;1.20e-13;15!UBERON:0001285;1.20e-13;15!UBERON:0007684;1.20e-13;15!UBERON:0001851;4.56e-13;15!UBERON:0000353;9.74e-12;15!UBERON:0001225;2.23e-11;12!UBERON:0008987;2.23e-11;12!UBERON:0002113;2.19e-10;24!UBERON:0011143;2.19e-10;24!UBERON:0004211;4.83e-09;10!UBERON:0009773;4.83e-09;10!UBERON:0001231;4.83e-09;10!UBERON:0004810;4.83e-09;10!UBERON:0006554;5.71e-09;30!UBERON:0001008;5.71e-09;30!UBERON:0000489;1.58e-08;29!UBERON:0000487;1.71e-08;22!UBERON:0004638;1.99e-08;18!UBERON:0001986;1.99e-08;18!UBERON:0004852;1.99e-08;18!UBERON:0000074;6.94e-08;7!UBERON:0001229;6.94e-08;7!UBERON:0003914;4.47e-07;74!UBERON:0006914;6.58e-07;25 | |||
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| ||
|short_description=p4@CDC20 | |||
}} | }} |
Latest revision as of 04:22, 18 September 2015
Short description: | p4@CDC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDC20_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_uc001ciy.2_5end |
EntrezGene: | CDC20 |
HGNC: | 1723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 6.88e-15 | 45 |
lining cell | 3.05e-14 | 58 |
barrier cell | 3.05e-14 | 58 |
mesodermal cell | 3.41e-14 | 121 |
endothelial cell | 4.48e-14 | 36 |
epithelial cell of nephron | 1.53e-13 | 15 |
embryonic cell | 1.83e-13 | 250 |
epithelial cell | 2.08e-11 | 253 |
kidney cell | 2.39e-11 | 17 |
kidney epithelial cell | 2.39e-11 | 17 |
kidney cortical cell | 2.52e-11 | 12 |
renal cortical epithelial cell | 2.52e-11 | 12 |
kidney tubule cell | 6.11e-09 | 10 |
nephron tubule epithelial cell | 6.11e-09 | 10 |
endothelial cell of vascular tree | 6.16e-09 | 24 |
blood vessel endothelial cell | 6.65e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.65e-09 | 18 |
glomerular cell | 6.42e-08 | 7 |
kidney corpuscule cell | 6.42e-08 | 7 |
squamous epithelial cell | 1.25e-07 | 63 |