FFCP PHASE1:Hg19::chr4:5894801..5894820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1400 | |EntrezGene=1400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2365 | |HGNC=2365 | ||
|TSSclassifier=strong | |||
|UniProt=A0EJG6,B3KT07,Q96I11 | |UniProt=A0EJG6,B3KT07,Q96I11 | ||
|association_with_transcript=-16bp_to_ENST00000324989,NM_001014809,uc003gis.2_5end | |association_with_transcript=-16bp_to_ENST00000324989,NM_001014809,uc003gis.2_5end | ||
|cluster_id=chr4:5894801..5894820,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_CRMP1_5end | |description=CAGE_peak_2_at_CRMP1_5end | ||
|id=chr4:5894801..5894820,- | |id=chr4:5894801..5894820,- | ||
|ontology_enrichment_celltype=CL:0002319!1.10e-14!25;CL:0000133!6.08e-12!59;CL:0000047!3.95e-11!8;CL:0000540!7.79e-09!6;CL:0000031!7.79e-09!6;CL:0000404!7.79e-09!6;CL:0000221!1.50e-08!71;CL:0000333!1.21e-07!41;CL:0000095!7.30e-07!17;CL:0000123!7.30e-07!17;CL:0002322!9.75e-07!5 | |ontology_enrichment_celltype=CL:0002319!1.10e-14!25;CL:0000133!6.08e-12!59;CL:0000047!3.95e-11!8;CL:0000540!7.79e-09!6;CL:0000031!7.79e-09!6;CL:0000404!7.79e-09!6;CL:0000221!1.50e-08!71;CL:0000333!1.21e-07!41;CL:0000095!7.30e-07!17;CL:0000123!7.30e-07!17;CL:0002322!9.75e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.25e-13;6!CL:0000404;4.25e-13;6!CL:0002322;8.03e-10;5!CL:0002321;6.38e-08;15!CL:0002319;6.62e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.80e-17,8;CL:0000540,4.25e-13,6;CL:0000031,4.25e-13,6;CL:0000404,4.25e-13,6;CL:0002322,8.79e-10,5;CL:0000133,4.64e-08,59;CL:0002319,6.65e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.26e-17;82!CL:0000031;4.25e-13;6!UBERON:0006215;1.10e-07;3!UBERON:0003056;6.87e-07;3 | |||
|ontology_enrichment_disease=DOID:171!2.31e-07!10;DOID:3095!9.49e-07!22;DOID:2994!9.49e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.63e-74!82;UBERON:0000073!5.28e-74!94;UBERON:0001016!5.28e-74!94;UBERON:0005743!3.82e-72!86;UBERON:0001049!1.08e-65!57;UBERON:0005068!1.08e-65!57;UBERON:0006241!1.08e-65!57;UBERON:0007135!1.08e-65!57;UBERON:0000955!1.17e-58!69;UBERON:0006238!1.17e-58!69;UBERON:0002616!1.80e-55!59;UBERON:0002346!3.97e-52!90;UBERON:0002780!3.57e-50!41;UBERON:0001890!3.57e-50!41;UBERON:0006240!3.57e-50!41;UBERON:0003080!1.24e-48!42;UBERON:0003075!1.74e-48!86;UBERON:0007284!1.74e-48!86;UBERON:0000924!1.62e-47!173;UBERON:0006601!1.62e-47!173;UBERON:0004121!2.90e-44!169;UBERON:0001893!6.31e-42!34;UBERON:0002020!9.55e-42!34;UBERON:0003528!9.55e-42!34;UBERON:0002791!1.49e-40!33;UBERON:0001869!4.42e-40!32;UBERON:0007023!1.66e-34!115;UBERON:0003056!4.34e-34!61;UBERON:0000956!2.89e-32!25;UBERON:0000203!2.89e-32!25;UBERON:0000033!1.26e-31!123;UBERON:0000153!4.24e-31!129;UBERON:0007811!4.24e-31!129;UBERON:0002619!5.42e-30!22;UBERON:0001950!1.26e-27!20;UBERON:0003076!2.06e-17!15;UBERON:0003057!2.06e-17!15;UBERON:0000025!6.68e-16!194;UBERON:0004732!2.84e-15!13;UBERON:0004733!2.28e-14!12;UBERON:0002028!2.28e-14!12;UBERON:0007277!2.28e-14!12;UBERON:0000922!2.27e-12!612;UBERON:0004111!2.37e-12!241;UBERON:0000064!9.88e-12!219;UBERON:0001871!2.39e-11!7;UBERON:0002680!2.64e-11!9;UBERON:0001895!2.64e-11!9;UBERON:0010092!2.64e-11!9;UBERON:0002420!3.63e-11!9;UBERON:0007245!3.63e-11!9;UBERON:0010009!3.63e-11!9;UBERON:0010011!3.63e-11!9;UBERON:0000454!3.63e-11!9;UBERON:0002308!8.26e-11!9;UBERON:0000125!8.26e-11!9;UBERON:0000477!1.12e-10!286;UBERON:0000483!9.40e-10!309;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0000468!1.34e-09!659;UBERON:0001894!1.79e-09!7;UBERON:0006222!1.79e-09!7;UBERON:0000119!1.89e-09!312;UBERON:0000923!2.70e-09!604;UBERON:0005291!2.70e-09!604;UBERON:0006598!2.70e-09!604;UBERON:0002532!2.70e-09!604;UBERON:0000200!6.89e-09!6;UBERON:0009663!1.09e-08!7;UBERON:0000475!1.17e-08!365;UBERON:0002021!5.81e-08!5;UBERON:0002037!6.36e-08!6;UBERON:0006215!6.36e-08!6;UBERON:0001872!6.50e-08!5;UBERON:0000349!1.12e-07!5;UBERON:0002298!1.39e-07!8;UBERON:0000467!5.07e-07!625;UBERON:0000480!5.90e-07!626 | |ontology_enrichment_uberon=UBERON:0001017!1.63e-74!82;UBERON:0000073!5.28e-74!94;UBERON:0001016!5.28e-74!94;UBERON:0005743!3.82e-72!86;UBERON:0001049!1.08e-65!57;UBERON:0005068!1.08e-65!57;UBERON:0006241!1.08e-65!57;UBERON:0007135!1.08e-65!57;UBERON:0000955!1.17e-58!69;UBERON:0006238!1.17e-58!69;UBERON:0002616!1.80e-55!59;UBERON:0002346!3.97e-52!90;UBERON:0002780!3.57e-50!41;UBERON:0001890!3.57e-50!41;UBERON:0006240!3.57e-50!41;UBERON:0003080!1.24e-48!42;UBERON:0003075!1.74e-48!86;UBERON:0007284!1.74e-48!86;UBERON:0000924!1.62e-47!173;UBERON:0006601!1.62e-47!173;UBERON:0004121!2.90e-44!169;UBERON:0001893!6.31e-42!34;UBERON:0002020!9.55e-42!34;UBERON:0003528!9.55e-42!34;UBERON:0002791!1.49e-40!33;UBERON:0001869!4.42e-40!32;UBERON:0007023!1.66e-34!115;UBERON:0003056!4.34e-34!61;UBERON:0000956!2.89e-32!25;UBERON:0000203!2.89e-32!25;UBERON:0000033!1.26e-31!123;UBERON:0000153!4.24e-31!129;UBERON:0007811!4.24e-31!129;UBERON:0002619!5.42e-30!22;UBERON:0001950!1.26e-27!20;UBERON:0003076!2.06e-17!15;UBERON:0003057!2.06e-17!15;UBERON:0000025!6.68e-16!194;UBERON:0004732!2.84e-15!13;UBERON:0004733!2.28e-14!12;UBERON:0002028!2.28e-14!12;UBERON:0007277!2.28e-14!12;UBERON:0000922!2.27e-12!612;UBERON:0004111!2.37e-12!241;UBERON:0000064!9.88e-12!219;UBERON:0001871!2.39e-11!7;UBERON:0002680!2.64e-11!9;UBERON:0001895!2.64e-11!9;UBERON:0010092!2.64e-11!9;UBERON:0002420!3.63e-11!9;UBERON:0007245!3.63e-11!9;UBERON:0010009!3.63e-11!9;UBERON:0010011!3.63e-11!9;UBERON:0000454!3.63e-11!9;UBERON:0002308!8.26e-11!9;UBERON:0000125!8.26e-11!9;UBERON:0000477!1.12e-10!286;UBERON:0000483!9.40e-10!309;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0000468!1.34e-09!659;UBERON:0001894!1.79e-09!7;UBERON:0006222!1.79e-09!7;UBERON:0000119!1.89e-09!312;UBERON:0000923!2.70e-09!604;UBERON:0005291!2.70e-09!604;UBERON:0006598!2.70e-09!604;UBERON:0002532!2.70e-09!604;UBERON:0000200!6.89e-09!6;UBERON:0009663!1.09e-08!7;UBERON:0000475!1.17e-08!365;UBERON:0002021!5.81e-08!5;UBERON:0002037!6.36e-08!6;UBERON:0006215!6.36e-08!6;UBERON:0001872!6.50e-08!5;UBERON:0000349!1.12e-07!5;UBERON:0002298!1.39e-07!8;UBERON:0000467!5.07e-07!625;UBERON:0000480!5.90e-07!626 | ||
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|short_description=p2@CRMP1 | |short_description=p2@CRMP1 | ||
}} | }} |
Latest revision as of 04:06, 18 September 2015
Short description: | p2@CRMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRMP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -16bp_to_ENST00000324989, NM_001014809, uc003gis.2_5end |
EntrezGene: | CRMP1 |
HGNC: | 2365 |
UniProt: | A0EJG6B3KT07Q96I11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.80e-17 | 8 |
neuron | 4.25e-13 | 6 |
neuroblast | 4.25e-13 | 6 |
electrically signaling cell | 4.25e-13 | 6 |
embryonic stem cell | 8.79e-10 | 5 |
neurectodermal cell | 4.64e-08 | 59 |
neural cell | 6.65e-08 | 25 |