FFCP PHASE1:Hg19::chr11:394157..394180,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:394157..394180,+
|short_description=p3@PKP3
|description=CAGE_peak_3_at_PKP3_5end
|association_with_transcript=12bp_to_ENST00000528036_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11187 | |EntrezGene=11187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9025 | |HGNC=9025 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRW6 | |UniProt=E9PRW6 | ||
|association_with_transcript=12bp_to_ENST00000528036_5end | |||
|cluster_id=chr11:394157..394180,+ | |||
|coexpression_cluster_id=C511 | |||
|description=CAGE_peak_3_at_PKP3_5end | |||
|id=chr11:394157..394180,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.31e-47!254;CL:0002076!8.33e-27!43;CL:0000223!3.28e-23!59;CL:0002251!1.64e-12!21;CL:0002368!3.13e-12!13;CL:0002159!2.19e-11!13;CL:0002202!3.58e-08!9;CL:0002632!3.58e-08!9;CL:0000082!8.18e-08!19;CL:0000076!9.03e-08!62;CL:0000240!7.71e-07!6;CL:0000311!7.71e-07!6;CL:0000079!7.71e-07!6;CL:0000237!7.71e-07!6;CL:0000036!7.71e-07!6;CL:0000357!7.71e-07!6;CL:0000114!7.71e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.24e-27;42!CL:0002251;6.54e-17;20!CL:0002368;7.71e-17;13!CL:0002159;2.12e-14;14!CL:0002202;4.09e-11;9!CL:0002632;4.09e-11;9!CL:0000240;3.82e-09;6!CL:0000311;3.82e-09;6!CL:0000079;3.82e-09;6!CL:0000237;3.82e-09;6!CL:0000349;1.97e-08;19!CL:0000362;7.74e-08;9!CL:0000312;7.81e-08;5!CL:0000244;1.52e-07;4!CL:0000731;1.52e-07;4!CL:0002327;1.53e-07;4!CL:0000622;7.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.70e-45,253;CL:0002076,2.81e-36,42;CL:0000223,1.95e-27,58;CL:0002251,5.11e-17,20;CL:0002368,5.58e-17,13;CL:0002159,2.16e-14,14;CL:0002202,3.34e-11,9;CL:0002632,3.34e-11,9;CL:0000076,2.48e-09,63;CL:0000240,4.52e-09,6;CL:0000311,4.52e-09,6;CL:0000079,4.52e-09,6;CL:0000237,4.52e-09,6;CL:0000036,4.52e-09,6;CL:0000357,4.52e-09,6;CL:0000114,4.52e-09,6;CL:0000349,1.94e-08,19;CL:0000362,8.99e-08,9;CL:0000312,9.79e-08,5;CL:0000244,1.29e-07,4;CL:0000731,1.29e-07,4;CL:0002327,1.54e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;3.29e-14;58!CL:0000357;3.82e-09;6!CL:0000114;3.82e-09;6!UBERON:0008947;1.41e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.20e-39!106;DOID:0050687!1.31e-27!143;DOID:162!2.87e-14!235;DOID:1749!7.34e-14!14;DOID:14566!2.13e-13!239;DOID:299!9.34e-11!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.20e-19;14!DOID:305;2.52e-09;106!DOID:299;6.38e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.32e-29,106;DOID:0050687,4.58e-21,143;DOID:1749,4.85e-19,14;DOID:162,2.24e-10,235;DOID:14566,8.14e-10,239;DOID:299,3.65e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.17e-34!169;UBERON:0000925!2.17e-34!169;UBERON:0006595!2.17e-34!169;UBERON:0001004!3.08e-25!72;UBERON:0001007!3.86e-25!155;UBERON:0001555!3.86e-25!155;UBERON:0007026!3.86e-25!155;UBERON:0000077!9.11e-23!130;UBERON:0004921!3.24e-22!129;UBERON:0004185!3.24e-22!129;UBERON:0000065!1.91e-21!53;UBERON:0008947!7.22e-18!38;UBERON:0003258!7.22e-18!38;UBERON:0001041!8.45e-18!98;UBERON:0000072!1.47e-16!46;UBERON:0005153!2.94e-14!37;UBERON:0005911!3.75e-14!82;UBERON:0005157!1.84e-11!51;UBERON:0005178!3.60e-11!34;UBERON:0002224!3.60e-11!34;UBERON:0005181!1.25e-10!35;UBERON:0005631!1.35e-10!14;UBERON:0000158!1.35e-10!14;UBERON:0000464!1.73e-10!104;UBERON:0000466!2.94e-09!126;UBERON:0002048!4.16e-09!22;UBERON:0000117!4.16e-09!22;UBERON:0000171!4.16e-09!22;UBERON:0000170!4.16e-09!22;UBERON:0005597!4.16e-09!22;UBERON:0000118!4.16e-09!22;UBERON:0000161!4.30e-09!35;UBERON:0004807!1.23e-08!28;UBERON:0001737!1.34e-08!9;UBERON:0001557!1.65e-08!19;UBERON:0004175!1.76e-08!25;UBERON:0000915!2.10e-08!52;UBERON:0003124!2.95e-08!7;UBERON:0005795!3.35e-08!22;UBERON:0005156!5.88e-08!59;UBERON:0000990!5.88e-08!59;UBERON:0004802!8.18e-08!19;UBERON:0000115!8.18e-08!19;UBERON:0000995!9.83e-08!21;UBERON:0003100!1.20e-07!41;UBERON:0000344!1.25e-07!12;UBERON:0000166!1.38e-07!21;UBERON:0000064!3.27e-07!219;UBERON:0001048!3.41e-07!168;UBERON:0003975!3.49e-07!22;UBERON:0000062!4.15e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.54e-13;37!UBERON:0000065;4.94e-13;44!UBERON:0001737;1.40e-11;9!UBERON:0001557;1.40e-11;9!UBERON:0001004;6.02e-11;65!UBERON:0005911;1.34e-10;36!UBERON:0000344;6.03e-10;20!UBERON:0005631;1.73e-09;10!UBERON:0000158;1.73e-09;10!UBERON:0004807;2.97e-09;22!UBERON:0000365;1.36e-08;5!UBERON:0000478;1.59e-08;24!UBERON:0000486;7.36e-08;12!UBERON:0001911;1.53e-07;4!UBERON:0007196;2.94e-07;15!UBERON:0001558;2.94e-07;15!UBERON:0005178;3.13e-07;34!UBERON:0002224;3.13e-07;34!UBERON:0001987;3.54e-07;4!UBERON:0000161;4.56e-07;19!UBERON:0000166;4.56e-07;19!UBERON:0005910;4.84e-07;6!UBERON:0000165;6.24e-07;28!UBERON:0005181;8.63e-07;35!UBERON:0003729;9.97e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.23e-28,160;UBERON:0000925,5.23e-28,160;UBERON:0006595,5.23e-28,160;UBERON:0001004,4.79e-21,74;UBERON:0001007,1.60e-18,145;UBERON:0001555,1.60e-18,145;UBERON:0007026,1.60e-18,145;UBERON:0000065,3.36e-18,54;UBERON:0004921,1.72e-16,118;UBERON:0000072,1.79e-15,47;UBERON:0005631,7.43e-15,14;UBERON:0000158,7.43e-15,14;UBERON:0008947,7.49e-15,38;UBERON:0003258,7.49e-15,38;UBERON:0001041,8.66e-14,87;UBERON:0001737,1.45e-11,9;UBERON:0003124,4.46e-11,7;UBERON:0000344,5.48e-10,20;UBERON:0001557,1.56e-09,19;UBERON:0005153,2.30e-09,37;UBERON:0000365,1.36e-08,5;UBERON:0000478,1.50e-08,24;UBERON:0000161,1.87e-08,36;UBERON:0005157,2.26e-08,47;UBERON:0005911,2.57e-08,82;UBERON:0000166,4.69e-08,22;UBERON:0004923,5.27e-08,66;UBERON:0003100,5.33e-08,41;UBERON:0005178,6.74e-08,34;UBERON:0002224,6.74e-08,34;UBERON:0005181,1.49e-07,35;UBERON:0001911,1.54e-07,4;UBERON:0005333,1.54e-07,4;UBERON:0008425,1.54e-07,4;UBERON:0005311,1.54e-07,4;UBERON:0007196,3.09e-07,15;UBERON:0001558,3.09e-07,15;UBERON:0001987,3.21e-07,4;UBERON:0004340,3.21e-07,4;UBERON:0005910,4.83e-07,6;UBERON:0003729,9.36e-07,13;UBERON:0000995,9.97e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.94880723801811,15.3516256953934,6.77168253603534,5.80287352102598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,25.74379428541,14.457884101356,11.0926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,9.83597278389864,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15797509499322,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7889120429611,3.27295344709002,5.16248271700207,0.121973706129595,0.795178609928912,0.348581828608555,0.621966330092223,0.756962552626885,0.72995471815166,0,0,0,0,0,2.72105640091641,2.86593973132773,2.16909926895134,3.19852520923942,3.26819166138609,4.03360052488864,2.15730093056263,2.35465758150415,1.53898862778556,0,0,0,0,0,0,0,0,3.32068784066407,0,10.9750285408626,12.3641928583382,5.42856451022807,4.9997760385606,0,0,0,0,0,0,0,0,3.1608175918371,4.29243081047436,0,0,0,3.74935335947108,5.87937448696008,6.94697976487694,5.82130397568514,8.4283842169049,28.3703182582256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5501234294205,6.65741758041988,6.04780586659361,0,0,0,0,0,0,0,0,0,0,0,0,4.10922128611516,11.8298817478938,3.77532054637175,0,0,0.131124414959424,0.902399225814824,0.847168708148562,0,0,0,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,3.44559322797703,6.50060246036521,0,0,0,0,0,0,0,0,0,5.95025695299521,8.45636296406467,10.4642424245559,5.8671512896219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86954887625624,8.04362730642945,9.80018863751903,1.03558180854457,8.6101074534246,13.47771805341,11.0857538384169,3.90529780351831,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,10.027268358983,2.07875276582847,8.29333895667927,0,0,0,0.659215496907038,3.1668811219199,0,0,2.01546198283421,0,0,0,2.69605053441981,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,5.77235999974892,0.724999575434793,4.77932482799099,1.5255219017566,0.945550727071745,1.03423011972439,0,0,0,0,0,0,0,0,0.871507708151921,4.1827123283581,0.538651809526579,0,2.07507513949254,1.25660702173681,3.15077378573823,7.97502899329799,1.64875668123352,7.46248686426089,0,0,0,1.1279783030859,1.17637520590644,0.671286347903371,0.37950746544837,0,1.68798451622422,0.979396848954886,1.97894300007517,0,0,0.530745387020035,1.83309043480088,0,0,0,0,0,0,0,1.36965233252463,0.242780379534093,0.789168805698781,0,0.30607276163049,0,0,0,0,0.330991955875499,0,0,2.84609546029793,0,3.12407529003236,2.93977192243133,4.26590112243973,0.873633341210151,0,0.870806981601766,0.584714536689484,1.06750094169172,3.58859361007152,0,0.225980740780532,0,0,0,2.54216797555244,0.160317640503067,0.85381197895741,1.19885765749278,0.864542502924636,0,0,1.58460277786965,0.124252535565433,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0.709048640765013,1.2362378757175,1.61768505250044,0,0,0,0,0.803765742325096,0.550157746388935,2.07720169014593,0,0.77380195455795,0,2.34804281319486,0,0.209818352539992,0.528001682597033,0,3.83830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,1.40963004463334,0.320362237703084,0.78602152549833,0.828478110694391,0,0,0,6.38341257770182,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,1.99968652739371,0,0,0,1.40500471742064,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0.643324774124777,0,0,1.389134845943,0,0,0.617602894321944,0.219284049578707,0,2.12205442098006,0,0.76872455576384,0,0,0,0,0,0,0,0,3.80361822045529,0,0,0,0,0,5.31542129333889,6.8428498603627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53331786603692,3.30315225373673,7.15371534234548,2.77261598760812,0,0,0,0.0752103283492573,0,3.12605604493237,0.785720083444267,0,2.51355346568977,0,0,0,0,0,0.548257766857182,0,0,1.66091155931474,0,0,0.606965604236632,1.13831095675649,2.92717821536708,0,0,0,0,0.945550727071746,1.55723962648897,0.39246546425257,0,1.68163297988273,0.913158720509496,0,0,0,0,0,0,0,1.03608082081518,1.3657478167516,1.38251932362818,0.860454717640555,0,0,0.423387050190929,2.97838929107265,0.62041277132864,0,7.60616936224988,1.96300467230486,2.68219434960993,0,0,0,0,3.27515248846948,1.59160620129095,0,0.90356865631168,0,4.07599677630019,2.00652811080656,0.437119121007915,0.470317296361523,0,0.707029641304878,0,0,0,0,0,0,0,1.42843150884526,9.52816153632368,4.33303380121509,1.46067277649303,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0.253397002022874,1.73381010561369,0,1.28652859348783,0.752122617877125,0,0,0,0,1.27940389140589,0.714193294391221,0.645889098360061,0.31037357147929,0.224263725161227,1.40023748211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| ||
|short_description=p3@PKP3 | |||
}} | }} |
Latest revision as of 22:43, 17 September 2015
Short description: | p3@PKP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PKP3_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 12bp_to_ENST00000528036_5end |
EntrezGene: | PKP3 |
HGNC: | 9025 |
UniProt: | E9PRW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.70e-45 | 253 |
endo-epithelial cell | 2.81e-36 | 42 |
endodermal cell | 1.95e-27 | 58 |
epithelial cell of alimentary canal | 5.11e-17 | 20 |
respiratory epithelial cell | 5.58e-17 | 13 |
general ecto-epithelial cell | 2.16e-14 | 14 |
epithelial cell of tracheobronchial tree | 3.34e-11 | 9 |
epithelial cell of lower respiratory tract | 3.34e-11 | 9 |
squamous epithelial cell | 2.48e-09 | 63 |
stratified squamous epithelial cell | 4.52e-09 | 6 |
keratin accumulating cell | 4.52e-09 | 6 |
stratified epithelial cell | 4.52e-09 | 6 |
keratinizing barrier epithelial cell | 4.52e-09 | 6 |
epithelial fate stem cell | 4.52e-09 | 6 |
stratified epithelial stem cell | 4.52e-09 | 6 |
surface ectodermal cell | 4.52e-09 | 6 |
extraembryonic cell | 1.94e-08 | 19 |
epidermal cell | 8.99e-08 | 9 |
keratinocyte | 9.79e-08 | 5 |
transitional epithelial cell | 1.29e-07 | 4 |
urothelial cell | 1.29e-07 | 4 |
mammary gland epithelial cell | 1.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.32e-29 | 106 |
cell type cancer | 4.58e-21 | 143 |
squamous cell carcinoma | 4.85e-19 | 14 |
cancer | 2.24e-10 | 235 |
disease of cellular proliferation | 8.14e-10 | 239 |
adenocarcinoma | 3.65e-09 | 25 |