FFCP PHASE1:Hg19::chr2:56149828..56149839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2202 | |EntrezGene=2202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3218 | |HGNC=3218 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-249bp_to_DQ892514,DQ895728_5end | |||
|cluster_id=chr2:56149828..56149839,- | |||
|description=CAGE_peak_17_at_EFEMP1_5end | |||
|id=chr2:56149828..56149839,- | |||
|ontology_enrichment_celltype=CL:0002139!9.95e-64!24;CL:0000115!1.38e-51!35;CL:0000213!1.99e-45!57;CL:0000215!1.99e-45!57;CL:0002078!1.27e-43!44;CL:0000071!3.24e-41!18;CL:0002546!3.24e-41!18;CL:0005020!6.87e-25!6;CL:0002138!6.87e-25!6;CL:0005022!6.87e-25!6;CL:0000222!3.49e-23!119;CL:0002543!5.48e-17!6;CL:0000076!1.24e-16!62;CL:1000413!2.45e-15!9;CL:0002144!1.42e-13!3;CL:0002618!5.90e-13!3;CL:0002544!6.86e-11!6;CL:0000220!1.09e-09!246;CL:0002321!1.50e-09!248;CL:0002545!4.79e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.14e-54;3!CL:0002139;2.02e-36;24!CL:0000115;4.30e-29;36!CL:0002138;1.07e-27;6!CL:0002078;8.17e-23;45!CL:0000213;3.38e-21;58!CL:0000215;3.38e-21;58!CL:0000071;2.07e-16;18!CL:0002188;2.90e-15;5!CL:1000746;3.48e-11;7!CL:1000612;3.48e-11;7!CL:0002541;2.88e-07;3!CL:0002618;2.88e-07;3!CL:0002681;6.74e-07;12!CL:0002584;6.74e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.51e-54,3;CL:0000115,9.71e-40,36;CL:0002139,2.18e-36,24;CL:0002078,1.01e-31,45;CL:0000213,2.19e-30,58;CL:0000215,2.19e-30,58;CL:0005020,1.12e-27,6;CL:0002138,1.12e-27,6;CL:0005022,1.12e-27,6;CL:0000071,2.16e-16,18;CL:0002546,2.16e-16,18;CL:0002188,3.12e-15,5;CL:0000222,2.79e-14,121;CL:1000746,3.66e-11,7;CL:1000612,3.66e-11,7;CL:0002541,2.47e-07,3;CL:0002618,2.79e-07,3;CL:0000076,2.88e-07,63;CL:0002681,6.94e-07,12;CL:0002584,6.94e-07,12 | |||
|ontology_enrichment_development_v019=CL:0005022;1.07e-27;6!CL:0002546;2.07e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.24e-41!18;UBERON:0004638!3.24e-41!18;UBERON:0004852!3.24e-41!18;UBERON:0000487!4.18e-33!22;UBERON:0006914!6.10e-33!25;UBERON:0000055!7.99e-28!69;UBERON:0002049!1.57e-23!79;UBERON:0007798!1.57e-23!79;UBERON:0001473!1.70e-18!8;UBERON:0004536!1.70e-18!8;UBERON:0006558!1.70e-18!8;UBERON:0004535!3.17e-18!110;UBERON:0001009!1.43e-17!113;UBERON:0001981!3.35e-17!60;UBERON:0007500!3.35e-17!60;UBERON:0004537!3.35e-17!60;UBERON:0006965!3.35e-17!60;UBERON:0003915!2.45e-15!9;UBERON:0004700!2.45e-15!9;UBERON:0001917!2.45e-15!9;UBERON:0002465!1.18e-14!10;UBERON:0004872!6.04e-14!84;UBERON:0001915!1.42e-13!3;UBERON:0001982!1.42e-13!3;UBERON:0001638!3.22e-11!9;UBERON:0003920!3.22e-11!9;UBERON:0004582!3.22e-11!9;UBERON:0003914!6.33e-11!118;UBERON:0005800!4.79e-09!2;UBERON:0001515!4.79e-09!2;UBERON:0004111!1.86e-08!241;UBERON:0002066!6.17e-08!5;UBERON:0001637!2.42e-07!42;UBERON:0003509!2.42e-07!42;UBERON:0004572!2.42e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.14e-54;3!UBERON:0001915;1.14e-54;3!UBERON:0001982;1.14e-54;3!UBERON:0001473;5.71e-21;8!UBERON:0004536;5.71e-21;8!UBERON:0006558;5.71e-21;8!UBERON:0002465;6.36e-17;10!UBERON:0004638;2.07e-16;18!UBERON:0001986;2.07e-16;18!UBERON:0004852;2.07e-16;18!UBERON:0000487;1.69e-13;22!UBERON:0000055;6.76e-13;65!UBERON:0006914;6.39e-12;25!UBERON:0000074;3.48e-11;7!UBERON:0001229;3.48e-11;7!UBERON:0000490;2.11e-08;33!UBERON:0002049;5.78e-08;75!UBERON:0007798;5.78e-08;75!UBERON:0003124;2.88e-07;3!UBERON:0000920;2.88e-07;3!UBERON:0001225;6.74e-07;12!UBERON:0008987;6.74e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.51e-54,3;UBERON:0001915,1.51e-54,3;UBERON:0001982,1.51e-54,3;UBERON:0001473,5.91e-21,8;UBERON:0004536,5.91e-21,8;UBERON:0006558,5.91e-21,8;UBERON:0002465,6.54e-17,10;UBERON:0004638,2.16e-16,18;UBERON:0001986,2.16e-16,18;UBERON:0004852,2.16e-16,18;UBERON:0000487,1.75e-13,22;UBERON:0000055,1.05e-12,68;UBERON:0006914,6.57e-12,25;UBERON:0010532,3.66e-11,7;UBERON:0000074,3.66e-11,7;UBERON:0001229,3.66e-11,7;UBERON:0001230,3.66e-11,7;UBERON:0003220,3.66e-11,7;UBERON:0005749,3.66e-11,7;UBERON:0004199,3.66e-11,7;UBERON:0004209,3.66e-11,7;UBERON:0004198,3.66e-11,7;UBERON:0002049,4.93e-11,78;UBERON:0007798,4.93e-11,78;UBERON:0005103,6.94e-10,8;UBERON:0000083,6.94e-10,8;UBERON:0009201,6.94e-10,8;UBERON:0006553,6.94e-10,8;UBERON:0003074,6.94e-10,8;UBERON:0003060,6.94e-10,8;UBERON:0000080,6.88e-09,9;UBERON:0002120,6.88e-09,9;UBERON:0004875,6.88e-09,9;UBERON:0005721,6.88e-09,9;UBERON:0005754,6.88e-09,9;UBERON:0007297,6.88e-09,9;UBERON:0004535,8.68e-08,109;UBERON:0001009,1.44e-07,112;UBERON:0004876,1.96e-07,11;UBERON:0000920,2.47e-07,3;UBERON:0001225,6.94e-07,12;UBERON:0008987,6.94e-07,12;UBERON:0003887,6.94e-07,12 | |||
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| ||
|short_description=p17@EFEMP1 | |||
}} | }} |
Latest revision as of 18:16, 17 September 2015
Short description: | p17@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_EFEMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -249bp_to_DQ892514, DQ895728_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.51e-54 | 3 |
endothelial cell | 9.71e-40 | 36 |
endothelial cell of vascular tree | 2.18e-36 | 24 |
meso-epithelial cell | 1.01e-31 | 45 |
lining cell | 2.19e-30 | 58 |
barrier cell | 2.19e-30 | 58 |
lymphangioblast | 1.12e-27 | 6 |
endothelial cell of lymphatic vessel | 1.12e-27 | 6 |
vascular lymphangioblast | 1.12e-27 | 6 |
blood vessel endothelial cell | 2.16e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.16e-16 | 18 |
glomerular endothelial cell | 3.12e-15 | 5 |
mesodermal cell | 2.79e-14 | 121 |
glomerular cell | 3.66e-11 | 7 |
kidney corpuscule cell | 3.66e-11 | 7 |
chorionic membrane mesenchymal stem cell | 2.47e-07 | 3 |
endothelial cell of umbilical vein | 2.79e-07 | 3 |
squamous epithelial cell | 2.88e-07 | 63 |
kidney cortical cell | 6.94e-07 | 12 |
renal cortical epithelial cell | 6.94e-07 | 12 |