FFCP PHASE1:Hg19::chr1:27561052..27561061,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23038 | |EntrezGene=23038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29175 | |HGNC=29175 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5D0 | |UniProt=Q8N5D0 | ||
|association_with_transcript=45bp_to_ENST00000319394,NM_015023,uc001bno.2,uc009vst.2_5end | |association_with_transcript=45bp_to_ENST00000319394,NM_015023,uc001bno.2,uc009vst.2_5end | ||
|cluster_id=chr1:27561052..27561061,+ | |||
|description=CAGE_peak_5_at_WDTC1_5end | |description=CAGE_peak_5_at_WDTC1_5end | ||
|id=chr1:27561052..27561061,+ | |id=chr1:27561052..27561061,+ | ||
|ontology_enrichment_celltype=CL:1000497!1.02e-07!18;CL:0002518!1.02e-07!18;CL:1000449!8.15e-07!16 | |ontology_enrichment_celltype=CL:1000497!1.02e-07!18;CL:0002518!1.02e-07!18;CL:1000449!8.15e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.40e-15;3!CL:1000449;1.38e-11;15!CL:0002681;2.26e-10;12!CL:0002584;2.26e-10;12!CL:1000497;3.73e-10;17!CL:0002518;3.73e-10;17!CL:0002188;8.66e-10;5!CL:0000239;1.38e-07;3!CL:1000615;1.38e-07;3!CL:0002306;1.38e-07;3!CL:1000746;4.11e-07;7!CL:1000612;4.11e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.16e-15,3;CL:1000449,1.27e-11,15;CL:0002681,2.30e-10,12;CL:0002584,2.30e-10,12;CL:1000497,3.48e-10,17;CL:0002518,3.48e-10,17;CL:0002188,8.58e-10,5;CL:0000239,1.43e-07,3;CL:1000615,1.43e-07,3;CL:0002306,1.43e-07,3;CL:1000746,4.09e-07,7;CL:1000612,4.09e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000353!5.55e-07!17;UBERON:0002113!7.57e-07!27;UBERON:0003918!7.57e-07!27;UBERON:0005095!7.57e-07!27;UBERON:0007687!7.57e-07!27;UBERON:0004211!8.15e-07!16;UBERON:0001285!8.15e-07!16;UBERON:0007684!8.15e-07!16;UBERON:0003220!8.15e-07!16;UBERON:0004208!8.15e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.38e-11;15!UBERON:0000353;1.38e-11;15!UBERON:0004819;1.38e-11;15!UBERON:0001285;1.38e-11;15!UBERON:0007684;1.38e-11;15!UBERON:0001225;2.26e-10;12!UBERON:0008987;2.26e-10;12!UBERON:0000178;3.04e-08;15!UBERON:0001851;3.04e-08;15!UBERON:0000179;3.04e-08;15!UBERON:0000463;3.04e-08;15!UBERON:0006853;1.38e-07;3!UBERON:0007685;1.38e-07;3!UBERON:0004134;1.38e-07;3!UBERON:0000074;4.11e-07;7!UBERON:0001229;4.11e-07;7!UBERON:0002113;5.10e-07;24!UBERON:0011143;5.10e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.27e-11,15;UBERON:0009773,1.27e-11,15;UBERON:0001231,1.27e-11,15;UBERON:0001285,1.27e-11,15;UBERON:0007684,1.27e-11,15;UBERON:0004208,1.27e-11,15;UBERON:0000353,1.32e-11,15;UBERON:0006555,7.38e-11,16;UBERON:0004819,7.38e-11,16;UBERON:0001225,2.30e-10,12;UBERON:0008987,2.30e-10,12;UBERON:0000178,2.10e-08,15;UBERON:0000179,2.10e-08,15;UBERON:0000463,2.10e-08,15;UBERON:0001851,3.08e-08,15;UBERON:0006853,1.43e-07,3;UBERON:0007685,1.43e-07,3;UBERON:0004134,1.43e-07,3;UBERON:0010532,4.09e-07,7;UBERON:0000074,4.09e-07,7;UBERON:0001229,4.09e-07,7;UBERON:0001230,4.09e-07,7;UBERON:0003220,4.09e-07,7;UBERON:0005749,4.09e-07,7;UBERON:0004199,4.09e-07,7;UBERON:0004209,4.09e-07,7;UBERON:0004198,4.09e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0.218441372130172,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,1.25381888591235,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.426507697462265,0.587200878669695,1.10799081706375,0,0,0.895661896959697,0,0,0.581592955118259,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0.336985893439485,0,0.64290234678832,0,0.59675003159727,0.365328307529268,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.411202997999018,0,0.32592226663359,1.89379122293893,0,0.445641827540694,0.589211814949674,0.443067789167242,0.541607727530031,0.128091319725675,0.260118695119756,0.493313713811028,0.276350017785848,1.15921234294021,0.444859689486181,0.535081656179426,2.09071047609954,0.566546713487831,0,0,0.253019692019503,0.637130828648193,0,0,0.301150238155546,0.639933055772092,0,0.473554504088034,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,1.11332214173056,0,0,1.62273696827342,0.174129737299267,0,0.238490624305342,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.267899184852239,0.898117490504679,0.337834441449967,0,0.949265659568129,0.732806975721629,0,11.6334079244498,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0,0,0.323292113637624,0,0.10075209822764,0.169560592310488,0.193260853163297,0.545492241181669,0,0.243947412259191,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0,0,0.653638332277218,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0.219500570817251,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0.577465791044295,0,0,0,0,0.984868024349589,0.468008530278475,0.297262324577456,0.93733833986777,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0.264145302039678,0.207328115540772,0.144119953416961,0.25248486685276,0.380987365753014,1.14596527667483,1.17217447210047,1.71072446022705,0.205654985406647,0,0,0.224262168690721,0,0.2933531432838,0,3.57656445851882,0.845302752556,0,0,0,2.83698264046557,0.266422179016099,0,0,2.46972101034231,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.394061520403854,0,0.641715181398742,0.254094624222463,0,1.54657762555539,0.167516265334349,0,0.749007023947182,0,2.07207756718018,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0.260650843404249,0.195801157462741,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.241718899183244,0,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.308061348417659,0.784349769176855,1.46139224653261,0.422206515571503,1.13733384070897,0.680374821106063,0.431831832204279,1.54227252690289,0,0.501689773854853,1.01950509218015,1.66215201785745,0.447749509444357,0,0.261435451024901,0,0,0.976135183992909,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0.178064071293475,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0.190630193923825,0.511795582622668,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0.564862804660675,0.43050537267123,0,0,0,1.52234282769651,1.52927441428475,0.569647187174163,0.238231775457789,2.46817363851717,1.29694662238543,1.62009431171434,0.79312517629427,0.213648142254946,0,0.245040215981032,0.371606350251437,0.432807638929335,0.142283686696828,0.318852545457645,0,0,0.211673582723883,0.649243880549111,1.12318871245384,0.228234679033192,0.156679895773023,0,0.169291777801603,0.321176150207399,0.201799707191048,0.851692475380653,0,0,0.671028323677248,0.166849141711909,0.586164286206121,0.278406173895242,1.23087398947712,0,0.33307196799782,0,0,0.439524537815682,0.485442086998054,0.445773537109913,0.284136146806413,0.23874448473769,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| ||
|short_description=p5@WDTC1 | |short_description=p5@WDTC1 | ||
}} | }} |
Latest revision as of 07:23, 17 September 2015
Short description: | p5@WDTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WDTC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000319394, NM_015023, uc001bno.2, uc009vst.2_5end |
EntrezGene: | WDTC1 |
HGNC: | 29175 |
UniProt: | Q8N5D0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.16e-15 | 3 |
epithelial cell of nephron | 1.27e-11 | 15 |
kidney cortical cell | 2.30e-10 | 12 |
renal cortical epithelial cell | 2.30e-10 | 12 |
kidney cell | 3.48e-10 | 17 |
kidney epithelial cell | 3.48e-10 | 17 |
glomerular endothelial cell | 8.58e-10 | 5 |
brush border epithelial cell | 1.43e-07 | 3 |
kidney cortex tubule cell | 1.43e-07 | 3 |
epithelial cell of proximal tubule | 1.43e-07 | 3 |
glomerular cell | 4.09e-07 | 7 |
kidney corpuscule cell | 4.09e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.27e-11 | 15 |
renal tubule | 1.27e-11 | 15 |
nephron tubule | 1.27e-11 | 15 |
nephron | 1.27e-11 | 15 |
uriniferous tubule | 1.27e-11 | 15 |
nephrogenic mesenchyme | 1.27e-11 | 15 |
parenchyma | 1.32e-11 | 15 |
excretory tube | 7.38e-11 | 16 |
kidney epithelium | 7.38e-11 | 16 |
cortex of kidney | 2.30e-10 | 12 |
renal parenchyma | 2.30e-10 | 12 |
blood | 2.10e-08 | 15 |
haemolymphatic fluid | 2.10e-08 | 15 |
organism substance | 2.10e-08 | 15 |
cortex | 3.08e-08 | 15 |
renal cortex tubule | 1.43e-07 | 3 |
region of nephron tubule | 1.43e-07 | 3 |
proximal tubule | 1.43e-07 | 3 |
primitive nephron | 4.09e-07 | 7 |
renal glomerulus | 4.09e-07 | 7 |
renal corpuscle | 4.09e-07 | 7 |
glomerular capsule | 4.09e-07 | 7 |
metanephric mesenchyme | 4.09e-07 | 7 |
glomerular tuft | 4.09e-07 | 7 |
S-shaped body | 4.09e-07 | 7 |
renal vesicle | 4.09e-07 | 7 |
comma-shaped body | 4.09e-07 | 7 |