FFCP PHASE1:Hg19::chr6:24358146..24358176,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:24358146..24358176,-
|short_description=p1@DCDC2
|description=CAGE_peak_1_at_DCDC2_5end
|association_with_transcript=103bp_to_ENST00000378454,ENST000004513...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51473 | |EntrezGene=51473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18141 | |HGNC=18141 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHG0,E9PGI5 | |UniProt=Q9UHG0,E9PGI5 | ||
|association_with_transcript=103bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | |||
|cluster_id=chr6:24358146..24358176,- | |||
|coexpression_cluster_id=C860 | |||
|description=CAGE_peak_1_at_DCDC2_5end | |||
|id=chr6:24358146..24358176,- | |||
|ontology_enrichment_celltype=CL:1000497!4.25e-13!18;CL:0002518!4.25e-13!18;CL:1000449!2.13e-11!16;CL:1000507!4.13e-10!12;CL:1000494!4.13e-10!12;CL:0000066!2.36e-09!254;CL:0002681!3.06e-08!13;CL:0002584!3.06e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.01e-20;17!CL:0002518;2.01e-20;17!CL:1000507;5.93e-18;10!CL:1000494;5.93e-18;10!CL:1000449;6.33e-18;15!CL:0002681;3.94e-13;12!CL:0002584;3.94e-13;12!CL:0002149;1.54e-07;6!CL:0002255;1.54e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.10e-20,17;CL:0002518,2.10e-20,17;CL:1000507,6.11e-18,10;CL:1000494,6.11e-18,10;CL:1000449,6.83e-18,15;CL:0000066,2.28e-13,253;CL:0002681,4.20e-13,12;CL:0002584,4.20e-13,12;CL:0002149,1.55e-07,6;CL:0002255,1.55e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.04e-10;31!UBERON:0007123;4.20e-08;5!UBERON:0009497;2.53e-07;13!UBERON:0003918;5.14e-07;10!UBERON:0007687;5.14e-07;10!UBERON:0004161;5.60e-07;11 | |||
|ontology_enrichment_disease=DOID:299!1.34e-14!25;DOID:193!8.25e-14!29;DOID:120!2.57e-12!27;DOID:305!1.75e-09!106;DOID:0050687!3.16e-09!143;DOID:2394!3.32e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;2.18e-16;25!DOID:193;4.74e-16;29!DOID:120;6.09e-14;27!DOID:3001;1.54e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.89e-16,25;DOID:193,5.82e-16,29;DOID:120,6.58e-14,27;DOID:0050687,6.57e-13,143;DOID:305,1.68e-12,106;DOID:162,4.71e-10,235;DOID:14566,1.61e-09,239;DOID:3001,1.55e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005172!5.77e-16!55;UBERON:0005173!5.77e-16!55;UBERON:0002113!1.41e-15!27;UBERON:0003918!1.41e-15!27;UBERON:0005095!1.41e-15!27;UBERON:0007687!1.41e-15!27;UBERON:0000489!2.45e-15!32;UBERON:0006554!1.22e-13!44;UBERON:0003064!2.64e-13!37;UBERON:0002417!3.29e-13!61;UBERON:0000916!3.29e-13!61;UBERON:0000080!3.49e-13!18;UBERON:0002120!3.49e-13!18;UBERON:0004875!3.49e-13!18;UBERON:0005721!3.49e-13!18;UBERON:0005754!3.49e-13!18;UBERON:0007297!3.49e-13!18;UBERON:0001008!4.07e-13!45;UBERON:0000466!5.04e-13!126;UBERON:0003886!9.94e-13!63;UBERON:0004876!1.05e-12!20;UBERON:0000481!1.69e-12!347;UBERON:0000058!1.86e-12!26;UBERON:0006555!2.14e-12!17;UBERON:0005103!2.14e-12!17;UBERON:0000083!2.14e-12!17;UBERON:0009201!2.14e-12!17;UBERON:0004819!2.14e-12!17;UBERON:0006553!2.14e-12!17;UBERON:0003074!2.14e-12!17;UBERON:0003060!2.14e-12!17;UBERON:0005156!3.10e-12!59;UBERON:0000990!3.10e-12!59;UBERON:0000062!3.16e-12!511;UBERON:0002553!5.85e-12!70;UBERON:0002346!7.40e-12!90;UBERON:0005177!1.55e-11!107;UBERON:0004211!2.13e-11!16;UBERON:0001285!2.13e-11!16;UBERON:0007684!2.13e-11!16;UBERON:0003220!2.13e-11!16;UBERON:0004208!2.13e-11!16;UBERON:0003929!9.79e-11!54;UBERON:0003133!1.15e-10!48;UBERON:0003075!1.50e-10!86;UBERON:0007284!1.50e-10!86;UBERON:0003887!1.60e-10!21;UBERON:0009773!4.13e-10!12;UBERON:0001231!4.13e-10!12;UBERON:0004810!4.13e-10!12;UBERON:0000464!4.38e-10!104;UBERON:0007625!5.85e-10!11;UBERON:0009569!1.66e-09!113;UBERON:0000483!1.71e-09!309;UBERON:0005911!2.11e-09!82;UBERON:0000119!3.76e-09!312;UBERON:0001851!5.29e-09!16;UBERON:0001048!2.31e-08!168;UBERON:0001225!3.06e-08!13;UBERON:0008987!3.06e-08!13;UBERON:0000970!4.12e-08!20;UBERON:0007023!4.62e-08!115;UBERON:0000475!4.79e-08!365;UBERON:0003056!1.05e-07!61;UBERON:0000991!1.11e-07!21;UBERON:0009196!1.11e-07!21;UBERON:0009117!1.11e-07!21;UBERON:0005564!1.11e-07!21;UBERON:0000019!1.53e-07!19;UBERON:0000047!1.53e-07!19;UBERON:0004088!1.53e-07!19;UBERON:0003072!1.53e-07!19;UBERON:0003071!1.53e-07!19;UBERON:0004128!1.53e-07!19;UBERON:0002104!1.59e-07!21;UBERON:0000922!2.94e-07!612;UBERON:0004176!3.85e-07!22;UBERON:0003101!5.45e-07!22;UBERON:0000079!5.45e-07!22;UBERON:0003134!8.92e-07!37;UBERON:0000474!8.92e-07!37;UBERON:0002050!9.21e-07!605;UBERON:0005423!9.21e-07!605;UBERON:0000468!9.86e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.01e-21;24!UBERON:0011143;1.01e-21;24!UBERON:0004211;5.93e-18;10!UBERON:0009773;5.93e-18;10!UBERON:0001231;5.93e-18;10!UBERON:0004810;5.93e-18;10!UBERON:0006555;6.33e-18;15!UBERON:0004819;6.33e-18;15!UBERON:0001285;6.33e-18;15!UBERON:0007684;6.33e-18;15!UBERON:0000489;6.39e-17;29!UBERON:0006554;3.71e-16;30!UBERON:0001008;3.71e-16;30!UBERON:0001851;3.04e-14;15!UBERON:0005172;7.25e-14;52!UBERON:0005173;7.25e-14;52!UBERON:0001225;3.94e-13;12!UBERON:0008987;3.94e-13;12!UBERON:0002417;2.71e-11;58!UBERON:0000916;2.71e-11;58!UBERON:0000353;5.63e-10;15!UBERON:0003133;4.22e-09;44!UBERON:0003134;4.71e-09;33!UBERON:0004175;1.73e-08;21!UBERON:0002046;4.20e-08;5!UBERON:0002368;4.87e-08;33!UBERON:0007625;7.38e-08;11!UBERON:0000991;1.24e-07;21!UBERON:0000995;1.43e-07;17!UBERON:0003975;5.00e-07;18!UBERON:0000474;6.37e-07;37!UBERON:0000970;9.36e-07;20!UBERON:0002423;9.64e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.56e-25,54;UBERON:0005173,5.56e-25,54;UBERON:0002113,2.39e-24,26;UBERON:0003918,2.39e-24,26;UBERON:0011143,2.39e-24,26;UBERON:0005095,2.39e-24,26;UBERON:0007687,2.39e-24,26;UBERON:0002417,2.08e-21,60;UBERON:0000916,2.08e-21,60;UBERON:0006555,2.20e-19,16;UBERON:0004819,2.20e-19,16;UBERON:0000489,2.64e-19,31;UBERON:0004810,6.11e-18,10;UBERON:0004211,6.83e-18,15;UBERON:0009773,6.83e-18,15;UBERON:0001231,6.83e-18,15;UBERON:0001285,6.83e-18,15;UBERON:0007684,6.83e-18,15;UBERON:0004208,6.83e-18,15;UBERON:0005177,7.50e-17,101;UBERON:0009569,5.05e-16,112;UBERON:0001851,2.85e-14,15;UBERON:0001225,4.20e-13,12;UBERON:0008987,4.20e-13,12;UBERON:0006554,5.95e-13,47;UBERON:0001008,1.54e-12,48;UBERON:0003133,7.47e-11,48;UBERON:0000353,5.91e-10,15;UBERON:0005156,1.58e-09,59;UBERON:0000990,1.58e-09,59;UBERON:0003886,8.66e-09,54;UBERON:0002100,3.33e-08,199;UBERON:0003134,3.51e-08,37;UBERON:0000474,3.51e-08,37;UBERON:0001048,3.65e-08,160;UBERON:0002046,3.66e-08,5;UBERON:0004117,3.66e-08,5;UBERON:0007689,3.66e-08,5;UBERON:0007123,3.66e-08,5;UBERON:0003091,3.66e-08,5;UBERON:0000080,4.14e-08,9;UBERON:0002120,4.14e-08,9;UBERON:0004875,4.14e-08,9;UBERON:0005721,4.14e-08,9;UBERON:0005754,4.14e-08,9;UBERON:0007297,4.14e-08,9;UBERON:0002553,5.91e-08,61;UBERON:0007625,7.24e-08,11;UBERON:0002368,7.30e-08,35;UBERON:0003929,9.86e-08,54;UBERON:0000991,1.35e-07,21;UBERON:0009196,1.35e-07,21;UBERON:0009117,1.35e-07,21;UBERON:0005564,1.35e-07,21;UBERON:0004176,3.96e-07,22;UBERON:0005103,5.23e-07,8;UBERON:0000083,5.23e-07,8;UBERON:0009201,5.23e-07,8;UBERON:0006553,5.23e-07,8;UBERON:0003074,5.23e-07,8;UBERON:0003060,5.23e-07,8;UBERON:0000949,5.32e-07,45;UBERON:0005911,5.58e-07,82;UBERON:0003100,5.73e-07,41;UBERON:0003103,6.97e-07,68;UBERON:0009497,9.07e-07,25;UBERON:0000015,9.07e-07,25;UBERON:0002423,9.07e-07,25;UBERON:0006235,9.07e-07,25;UBERON:0004161,9.07e-07,25 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0.61560529038394,0.408001382488506,0.313454721478088,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14476311566441,2.66075276955077,6.76327849837071,6.67993285038334,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.860413786167011,0.243947412259191,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,18.6942426585533,0.514703430895577,0,0,1.20634766893957,0,0,0,5.77325368101093,2.31860809950154,6.10525210026273,0,0,0,41.0906286938823,40.348849618459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3043875313925,0,0.0920809889358963,0,0.364182336013434,0.655622074797121,45.5711609036486,133.467579201951,79.2193266868624,54.0715131217065,139.644805025275,0,0,8.85255256018771,3.08454505380579,35.7649297557886,40.1351819083883,58.6215428003588,39.8916484285788,63.1326808316543,0,0,4.35965212697862,0.984043937099117,0.976135183992909,3.29731237272711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,2.84741482246853,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77380532035299,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5972756536794,0,0,0,0,0,0,0.281338832821026,81.58928078179,0,0,0,0,6.80218419206545,0,0,0,5.30223271769228,0.895105873378046,0,0.394573622547734,0,0,0,0.834912883456661,0,7.812832832557,0,1.44999915086959,0,0,0,0,16.3298583494622,0,0,0.120596438625408,0,0,0,1.09692698576986,0,0,1.30815439456455,0,0.23056390438806,1.16684937732704,4.0199527611143,0,0.915975934018623,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,109.929991619102,61.7020014841578,137.39518543379,0,0.995261931078505,0.265372693510018,1.22206028986725,0,0,0,0.067401132980677,0,0,0,2.73930466504926,0,0.789168805698781,6.04953580243319,0.30607276163049,0.063186579628488,4.81034942126376,1.55532287095871,0,0,0,0,134.335705726062,0,9.37222587009707,0,0,31.6255269518075,0,0,0,0,0,0,1.12990370390266,0,0,0.0633107959558787,6.84429839571811,1.20238230377301,4.26905989478705,0,6.33997835478066,11.3391230204257,0,0,0,0,0,0,0,0,0,0,0,18.0501485396382,0,0,0,0,1.99679000498991,0,0,0,0,129.310503975474,42.621701628208,40.4661864651527,42.3968290842823,12.9924275599468,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0.121499113316049,0,31.6798943342777,67.9286916348225,0,0,0,0,0,0,0,0,0,5.98650957812437,0,0,0,0.879313402068495,2.65013777824443,0,0.13223260174269,12.489339165556,0.704815022316672,3.41719720216623,8.64623678048163,2.07119527673598,0,0,0,0,0,0,0,0,3.92635240625586,0,0,0,1.14681839138014,0.665574309221114,0.248385611765534,0,0,0,0,1.41159491818903,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,2.38945150745554,0.449803112163605,13.197351334482,0,0.53168342911599,7.30443086536427,0,2.28483127301277,4.47557806525128,0,33.8343254683839,0.464033759878494,1.19428766609585,0,0,0,0,1.73357847366573,0,0,0,27.0881294958886,0,0,0,0,36.3979640648515,0,0,189.874965273669,0,0,0.138258436151731,0,0,0,0,0.983091635014877,0,0,0,0.172214979660816,0,0,0,0,0,0,8.33509491836251,0,21.3862987742072,0,54.283864745443,12.2901881954114,0,0,0,0,0,0.449604575675217,0,0,0,0.252071696221718,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,1.65462722368366,0,17.193308247128,0,1.80149109261106,5.17496301759658,0.202612753855184,0,0.206686796501184,0,0,0,0.496211178389294,0.351742488719241,0,0,0,1.21393120847326,2.95960848756687,0.79832133146375,0,0,0.0679697329768317,0,0.118193840883968,0,1.17739639275771,0,11.7714308591791,0.913158720509496,7.12561051021451,3.8220135030964,2.21577286947635,0,0,0,0,0,0,0,0.860454717640555,0.354996002191696,0.937347452350735,3.38709640152743,37.5735264412242,15.2001128975517,14.3330840846615,203.576885871982,0,7.68082927388297,0,0,0,0,4.44484980578001,0,0.118920090777569,16.7160201417661,0,3.62310824560016,0.0771741581079447,1.96703604453562,3.29222107453066,0.490296643507811,3.53514820652439,0.196308467114945,0,0.4226557275834,0,0,0,0,0,1.05868461514708,0,1.46067277649303,0,0,0,0.0679914901909147,1.74540276136151,10.580536810308,0,0,0,0,0,0,1.1218771271618,0.534434810531121,0,1.25353769646188,3.18270532516606,1.60778478093707,0,0.103432995861895,0.426467963801962,3.80903090341985,0,0,9.86760390709398,5.02812550397503,5.05292972395548,0,0,0.26940821205835,1.4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| ||
|short_description=p1@DCDC2 | |||
}} | }} |
Latest revision as of 05:41, 17 September 2015
Short description: | p1@DCDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCDC2_5end |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | 103bp_to_ENST00000378454, ENST00000451359, NM_016356, uc003ndx.2_5end |
EntrezGene: | DCDC2 |
HGNC: | 18141 |
UniProt: | Q9UHG0E9PGI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.10e-20 | 17 |
kidney epithelial cell | 2.10e-20 | 17 |
kidney tubule cell | 6.11e-18 | 10 |
nephron tubule epithelial cell | 6.11e-18 | 10 |
epithelial cell of nephron | 6.83e-18 | 15 |
epithelial cell | 2.28e-13 | 253 |
kidney cortical cell | 4.20e-13 | 12 |
renal cortical epithelial cell | 4.20e-13 | 12 |
epithelial cell of uterus | 1.55e-07 | 6 |
stromal cell of endometrium | 1.55e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.89e-16 | 25 |
reproductive organ cancer | 5.82e-16 | 29 |
female reproductive organ cancer | 6.58e-14 | 27 |
cell type cancer | 6.57e-13 | 143 |
carcinoma | 1.68e-12 | 106 |
cancer | 4.71e-10 | 235 |
disease of cellular proliferation | 1.61e-09 | 239 |
female reproductive endometrioid cancer | 1.55e-07 | 6 |