FFCP PHASE1:Hg19::chr6:24358146..24358176,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51473 | |EntrezGene=51473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18141 | |HGNC=18141 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHG0,E9PGI5 | |UniProt=Q9UHG0,E9PGI5 | ||
|association_with_transcript=103bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | |association_with_transcript=103bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | ||
|cluster_id=chr6:24358146..24358176,- | |||
|coexpression_cluster_id=C860 | |||
|description=CAGE_peak_1_at_DCDC2_5end | |description=CAGE_peak_1_at_DCDC2_5end | ||
|id=chr6:24358146..24358176,- | |id=chr6:24358146..24358176,- | ||
|ontology_enrichment_celltype=CL:1000497!4.25e-13!18;CL:0002518!4.25e-13!18;CL:1000449!2.13e-11!16;CL:1000507!4.13e-10!12;CL:1000494!4.13e-10!12;CL:0000066!2.36e-09!254;CL:0002681!3.06e-08!13;CL:0002584!3.06e-08!13 | |ontology_enrichment_celltype=CL:1000497!4.25e-13!18;CL:0002518!4.25e-13!18;CL:1000449!2.13e-11!16;CL:1000507!4.13e-10!12;CL:1000494!4.13e-10!12;CL:0000066!2.36e-09!254;CL:0002681!3.06e-08!13;CL:0002584!3.06e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.01e-20;17!CL:0002518;2.01e-20;17!CL:1000507;5.93e-18;10!CL:1000494;5.93e-18;10!CL:1000449;6.33e-18;15!CL:0002681;3.94e-13;12!CL:0002584;3.94e-13;12!CL:0002149;1.54e-07;6!CL:0002255;1.54e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.10e-20,17;CL:0002518,2.10e-20,17;CL:1000507,6.11e-18,10;CL:1000494,6.11e-18,10;CL:1000449,6.83e-18,15;CL:0000066,2.28e-13,253;CL:0002681,4.20e-13,12;CL:0002584,4.20e-13,12;CL:0002149,1.55e-07,6;CL:0002255,1.55e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.04e-10;31!UBERON:0007123;4.20e-08;5!UBERON:0009497;2.53e-07;13!UBERON:0003918;5.14e-07;10!UBERON:0007687;5.14e-07;10!UBERON:0004161;5.60e-07;11 | |||
|ontology_enrichment_disease=DOID:299!1.34e-14!25;DOID:193!8.25e-14!29;DOID:120!2.57e-12!27;DOID:305!1.75e-09!106;DOID:0050687!3.16e-09!143;DOID:2394!3.32e-07!14 | |ontology_enrichment_disease=DOID:299!1.34e-14!25;DOID:193!8.25e-14!29;DOID:120!2.57e-12!27;DOID:305!1.75e-09!106;DOID:0050687!3.16e-09!143;DOID:2394!3.32e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;2.18e-16;25!DOID:193;4.74e-16;29!DOID:120;6.09e-14;27!DOID:3001;1.54e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.89e-16,25;DOID:193,5.82e-16,29;DOID:120,6.58e-14,27;DOID:0050687,6.57e-13,143;DOID:305,1.68e-12,106;DOID:162,4.71e-10,235;DOID:14566,1.61e-09,239;DOID:3001,1.55e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005172!5.77e-16!55;UBERON:0005173!5.77e-16!55;UBERON:0002113!1.41e-15!27;UBERON:0003918!1.41e-15!27;UBERON:0005095!1.41e-15!27;UBERON:0007687!1.41e-15!27;UBERON:0000489!2.45e-15!32;UBERON:0006554!1.22e-13!44;UBERON:0003064!2.64e-13!37;UBERON:0002417!3.29e-13!61;UBERON:0000916!3.29e-13!61;UBERON:0000080!3.49e-13!18;UBERON:0002120!3.49e-13!18;UBERON:0004875!3.49e-13!18;UBERON:0005721!3.49e-13!18;UBERON:0005754!3.49e-13!18;UBERON:0007297!3.49e-13!18;UBERON:0001008!4.07e-13!45;UBERON:0000466!5.04e-13!126;UBERON:0003886!9.94e-13!63;UBERON:0004876!1.05e-12!20;UBERON:0000481!1.69e-12!347;UBERON:0000058!1.86e-12!26;UBERON:0006555!2.14e-12!17;UBERON:0005103!2.14e-12!17;UBERON:0000083!2.14e-12!17;UBERON:0009201!2.14e-12!17;UBERON:0004819!2.14e-12!17;UBERON:0006553!2.14e-12!17;UBERON:0003074!2.14e-12!17;UBERON:0003060!2.14e-12!17;UBERON:0005156!3.10e-12!59;UBERON:0000990!3.10e-12!59;UBERON:0000062!3.16e-12!511;UBERON:0002553!5.85e-12!70;UBERON:0002346!7.40e-12!90;UBERON:0005177!1.55e-11!107;UBERON:0004211!2.13e-11!16;UBERON:0001285!2.13e-11!16;UBERON:0007684!2.13e-11!16;UBERON:0003220!2.13e-11!16;UBERON:0004208!2.13e-11!16;UBERON:0003929!9.79e-11!54;UBERON:0003133!1.15e-10!48;UBERON:0003075!1.50e-10!86;UBERON:0007284!1.50e-10!86;UBERON:0003887!1.60e-10!21;UBERON:0009773!4.13e-10!12;UBERON:0001231!4.13e-10!12;UBERON:0004810!4.13e-10!12;UBERON:0000464!4.38e-10!104;UBERON:0007625!5.85e-10!11;UBERON:0009569!1.66e-09!113;UBERON:0000483!1.71e-09!309;UBERON:0005911!2.11e-09!82;UBERON:0000119!3.76e-09!312;UBERON:0001851!5.29e-09!16;UBERON:0001048!2.31e-08!168;UBERON:0001225!3.06e-08!13;UBERON:0008987!3.06e-08!13;UBERON:0000970!4.12e-08!20;UBERON:0007023!4.62e-08!115;UBERON:0000475!4.79e-08!365;UBERON:0003056!1.05e-07!61;UBERON:0000991!1.11e-07!21;UBERON:0009196!1.11e-07!21;UBERON:0009117!1.11e-07!21;UBERON:0005564!1.11e-07!21;UBERON:0000019!1.53e-07!19;UBERON:0000047!1.53e-07!19;UBERON:0004088!1.53e-07!19;UBERON:0003072!1.53e-07!19;UBERON:0003071!1.53e-07!19;UBERON:0004128!1.53e-07!19;UBERON:0002104!1.59e-07!21;UBERON:0000922!2.94e-07!612;UBERON:0004176!3.85e-07!22;UBERON:0003101!5.45e-07!22;UBERON:0000079!5.45e-07!22;UBERON:0003134!8.92e-07!37;UBERON:0000474!8.92e-07!37;UBERON:0002050!9.21e-07!605;UBERON:0005423!9.21e-07!605;UBERON:0000468!9.86e-07!659 | |ontology_enrichment_uberon=UBERON:0005172!5.77e-16!55;UBERON:0005173!5.77e-16!55;UBERON:0002113!1.41e-15!27;UBERON:0003918!1.41e-15!27;UBERON:0005095!1.41e-15!27;UBERON:0007687!1.41e-15!27;UBERON:0000489!2.45e-15!32;UBERON:0006554!1.22e-13!44;UBERON:0003064!2.64e-13!37;UBERON:0002417!3.29e-13!61;UBERON:0000916!3.29e-13!61;UBERON:0000080!3.49e-13!18;UBERON:0002120!3.49e-13!18;UBERON:0004875!3.49e-13!18;UBERON:0005721!3.49e-13!18;UBERON:0005754!3.49e-13!18;UBERON:0007297!3.49e-13!18;UBERON:0001008!4.07e-13!45;UBERON:0000466!5.04e-13!126;UBERON:0003886!9.94e-13!63;UBERON:0004876!1.05e-12!20;UBERON:0000481!1.69e-12!347;UBERON:0000058!1.86e-12!26;UBERON:0006555!2.14e-12!17;UBERON:0005103!2.14e-12!17;UBERON:0000083!2.14e-12!17;UBERON:0009201!2.14e-12!17;UBERON:0004819!2.14e-12!17;UBERON:0006553!2.14e-12!17;UBERON:0003074!2.14e-12!17;UBERON:0003060!2.14e-12!17;UBERON:0005156!3.10e-12!59;UBERON:0000990!3.10e-12!59;UBERON:0000062!3.16e-12!511;UBERON:0002553!5.85e-12!70;UBERON:0002346!7.40e-12!90;UBERON:0005177!1.55e-11!107;UBERON:0004211!2.13e-11!16;UBERON:0001285!2.13e-11!16;UBERON:0007684!2.13e-11!16;UBERON:0003220!2.13e-11!16;UBERON:0004208!2.13e-11!16;UBERON:0003929!9.79e-11!54;UBERON:0003133!1.15e-10!48;UBERON:0003075!1.50e-10!86;UBERON:0007284!1.50e-10!86;UBERON:0003887!1.60e-10!21;UBERON:0009773!4.13e-10!12;UBERON:0001231!4.13e-10!12;UBERON:0004810!4.13e-10!12;UBERON:0000464!4.38e-10!104;UBERON:0007625!5.85e-10!11;UBERON:0009569!1.66e-09!113;UBERON:0000483!1.71e-09!309;UBERON:0005911!2.11e-09!82;UBERON:0000119!3.76e-09!312;UBERON:0001851!5.29e-09!16;UBERON:0001048!2.31e-08!168;UBERON:0001225!3.06e-08!13;UBERON:0008987!3.06e-08!13;UBERON:0000970!4.12e-08!20;UBERON:0007023!4.62e-08!115;UBERON:0000475!4.79e-08!365;UBERON:0003056!1.05e-07!61;UBERON:0000991!1.11e-07!21;UBERON:0009196!1.11e-07!21;UBERON:0009117!1.11e-07!21;UBERON:0005564!1.11e-07!21;UBERON:0000019!1.53e-07!19;UBERON:0000047!1.53e-07!19;UBERON:0004088!1.53e-07!19;UBERON:0003072!1.53e-07!19;UBERON:0003071!1.53e-07!19;UBERON:0004128!1.53e-07!19;UBERON:0002104!1.59e-07!21;UBERON:0000922!2.94e-07!612;UBERON:0004176!3.85e-07!22;UBERON:0003101!5.45e-07!22;UBERON:0000079!5.45e-07!22;UBERON:0003134!8.92e-07!37;UBERON:0000474!8.92e-07!37;UBERON:0002050!9.21e-07!605;UBERON:0005423!9.21e-07!605;UBERON:0000468!9.86e-07!659 | ||
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| ||
|short_description=p1@DCDC2 | |short_description=p1@DCDC2 | ||
}} | }} |
Latest revision as of 05:41, 17 September 2015
Short description: | p1@DCDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCDC2_5end |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | 103bp_to_ENST00000378454, ENST00000451359, NM_016356, uc003ndx.2_5end |
EntrezGene: | DCDC2 |
HGNC: | 18141 |
UniProt: | Q9UHG0E9PGI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.10e-20 | 17 |
kidney epithelial cell | 2.10e-20 | 17 |
kidney tubule cell | 6.11e-18 | 10 |
nephron tubule epithelial cell | 6.11e-18 | 10 |
epithelial cell of nephron | 6.83e-18 | 15 |
epithelial cell | 2.28e-13 | 253 |
kidney cortical cell | 4.20e-13 | 12 |
renal cortical epithelial cell | 4.20e-13 | 12 |
epithelial cell of uterus | 1.55e-07 | 6 |
stromal cell of endometrium | 1.55e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.89e-16 | 25 |
reproductive organ cancer | 5.82e-16 | 29 |
female reproductive organ cancer | 6.58e-14 | 27 |
cell type cancer | 6.57e-13 | 143 |
carcinoma | 1.68e-12 | 106 |
cancer | 4.71e-10 | 235 |
disease of cellular proliferation | 1.61e-09 | 239 |
female reproductive endometrioid cancer | 1.55e-07 | 6 |