FFCP PHASE1:Hg19::chr6:24358114..24358125,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51473 | |EntrezGene=51473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18141 | |HGNC=18141 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHG0,E9PGI5 | |UniProt=Q9UHG0,E9PGI5 | ||
|association_with_transcript=154bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | |association_with_transcript=154bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | ||
|cluster_id=chr6:24358114..24358125,- | |||
|coexpression_cluster_id=C860 | |coexpression_cluster_id=C860 | ||
|description=CAGE_peak_4_at_DCDC2_5end | |description=CAGE_peak_4_at_DCDC2_5end | ||
|id=chr6:24358114..24358125,- | |id=chr6:24358114..24358125,- | ||
|ontology_enrichment_celltype=CL:1000507!7.57e-20!12;CL:1000494!7.57e-20!12;CL:1000497!9.25e-18!18;CL:0002518!9.25e-18!18;CL:1000449!2.80e-17!16;CL:0000066!4.86e-12!254;CL:0002681!1.64e-11!13;CL:0002584!1.64e-11!13;CL:0000239!1.23e-08!3;CL:1000615!1.23e-08!3;CL:0002306!1.23e-08!3;CL:0000064!5.42e-07!3;CL:0005012!5.42e-07!3;CL:0000067!5.42e-07!3;CL:0002304!5.42e-07!3;CL:0002149!7.53e-07!6;CL:0002255!7.53e-07!6 | |ontology_enrichment_celltype=CL:1000507!7.57e-20!12;CL:1000494!7.57e-20!12;CL:1000497!9.25e-18!18;CL:0002518!9.25e-18!18;CL:1000449!2.80e-17!16;CL:0000066!4.86e-12!254;CL:0002681!1.64e-11!13;CL:0002584!1.64e-11!13;CL:0000239!1.23e-08!3;CL:1000615!1.23e-08!3;CL:0002306!1.23e-08!3;CL:0000064!5.42e-07!3;CL:0005012!5.42e-07!3;CL:0000067!5.42e-07!3;CL:0002304!5.42e-07!3;CL:0002149!7.53e-07!6;CL:0002255!7.53e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:1000507;8.35e-47;10!CL:1000494;8.35e-47;10!CL:1000449;7.52e-37;15!CL:1000497;2.94e-32;17!CL:0002518;2.94e-32;17!CL:0002681;9.21e-25;12!CL:0002584;9.21e-25;12!CL:0000239;1.26e-15;3!CL:1000615;1.26e-15;3!CL:0002306;1.26e-15;3!CL:0000650;1.06e-10;2!CL:1000500;1.06e-10;2!CL:1000618;1.06e-10;2!CL:1001318;1.06e-10;2!CL:0002173;1.06e-10;2!CL:0000182;5.02e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.19e-47,10;CL:1000494,8.19e-47,10;CL:1000449,7.42e-37,15;CL:1000497,2.91e-32,17;CL:0002518,2.91e-32,17;CL:0002681,9.68e-25,12;CL:0002584,9.68e-25,12;CL:0000239,1.39e-15,3;CL:1000615,1.39e-15,3;CL:0002306,1.39e-15,3;CL:0000066,6.86e-14,253;CL:0000650,1.53e-10,2;CL:1000500,1.53e-10,2;CL:1000618,1.53e-10,2;CL:1001318,1.53e-10,2;CL:0002173,1.53e-10,2;CL:0000182,5.80e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.80e-11;11!UBERON:0009497;3.12e-09;13!UBERON:0003104;7.81e-09;31 | |||
|ontology_enrichment_disease=DOID:299!1.87e-18!25;DOID:193!1.81e-11!29;DOID:120!1.19e-10!27;DOID:0050687!4.37e-10!143;DOID:305!2.95e-09!106;DOID:7!1.03e-08!39;DOID:162!5.92e-08!235;DOID:14566!1.41e-07!239;DOID:3001!7.53e-07!6 | |ontology_enrichment_disease=DOID:299!1.87e-18!25;DOID:193!1.81e-11!29;DOID:120!1.19e-10!27;DOID:0050687!4.37e-10!143;DOID:305!2.95e-09!106;DOID:7!1.03e-08!39;DOID:162!5.92e-08!235;DOID:14566!1.41e-07!239;DOID:3001!7.53e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:299;2.34e-14;25!DOID:4468;4.48e-11;2!DOID:120;2.33e-10;27!DOID:193;1.47e-09;29!DOID:7;4.13e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.71e-14,25;DOID:4468,4.27e-11,2;DOID:120,1.95e-10,27;DOID:193,1.25e-09,29;DOID:7,1.64e-08,39;DOID:305,3.80e-07,106;DOID:0050687,4.04e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.51e-22!27;UBERON:0003918!1.51e-22!27;UBERON:0005095!1.51e-22!27;UBERON:0007687!1.51e-22!27;UBERON:0005172!2.00e-21!55;UBERON:0005173!2.00e-21!55;UBERON:0000080!5.30e-21!18;UBERON:0002120!5.30e-21!18;UBERON:0004875!5.30e-21!18;UBERON:0005721!5.30e-21!18;UBERON:0005754!5.30e-21!18;UBERON:0007297!5.30e-21!18;UBERON:0009773!7.57e-20!12;UBERON:0001231!7.57e-20!12;UBERON:0004810!7.57e-20!12;UBERON:0006555!2.82e-19!17;UBERON:0005103!2.82e-19!17;UBERON:0000083!2.82e-19!17;UBERON:0009201!2.82e-19!17;UBERON:0004819!2.82e-19!17;UBERON:0006553!2.82e-19!17;UBERON:0003074!2.82e-19!17;UBERON:0003060!2.82e-19!17;UBERON:0002417!1.34e-18!61;UBERON:0000916!1.34e-18!61;UBERON:0004876!1.51e-18!20;UBERON:0000489!2.91e-18!32;UBERON:0003887!1.69e-17!21;UBERON:0004211!2.80e-17!16;UBERON:0001285!2.80e-17!16;UBERON:0007684!2.80e-17!16;UBERON:0003220!2.80e-17!16;UBERON:0004208!2.80e-17!16;UBERON:0000058!1.44e-15!26;UBERON:0009569!3.16e-14!113;UBERON:0001851!6.66e-14!16;UBERON:0006554!1.14e-13!44;UBERON:0003064!2.93e-13!37;UBERON:0001008!2.96e-13!45;UBERON:0005177!4.09e-12!107;UBERON:0001225!1.64e-11!13;UBERON:0008987!1.64e-11!13;UBERON:0002046!8.30e-11!5;UBERON:0004117!8.30e-11!5;UBERON:0007689!8.30e-11!5;UBERON:0007123!8.30e-11!5;UBERON:0003091!8.30e-11!5;UBERON:0000466!8.84e-11!126;UBERON:0003886!2.56e-10!63;UBERON:0002553!8.20e-10!70;UBERON:0006853!1.23e-08!3;UBERON:0007685!1.23e-08!3;UBERON:0004134!1.23e-08!3;UBERON:0000464!1.62e-08!104;UBERON:0000353!2.04e-08!17;UBERON:0002368!2.37e-08!35;UBERON:0001778!5.42e-07!3;UBERON:0001775!5.42e-07!3;UBERON:0003103!6.02e-07!69 | |ontology_enrichment_uberon=UBERON:0002113!1.51e-22!27;UBERON:0003918!1.51e-22!27;UBERON:0005095!1.51e-22!27;UBERON:0007687!1.51e-22!27;UBERON:0005172!2.00e-21!55;UBERON:0005173!2.00e-21!55;UBERON:0000080!5.30e-21!18;UBERON:0002120!5.30e-21!18;UBERON:0004875!5.30e-21!18;UBERON:0005721!5.30e-21!18;UBERON:0005754!5.30e-21!18;UBERON:0007297!5.30e-21!18;UBERON:0009773!7.57e-20!12;UBERON:0001231!7.57e-20!12;UBERON:0004810!7.57e-20!12;UBERON:0006555!2.82e-19!17;UBERON:0005103!2.82e-19!17;UBERON:0000083!2.82e-19!17;UBERON:0009201!2.82e-19!17;UBERON:0004819!2.82e-19!17;UBERON:0006553!2.82e-19!17;UBERON:0003074!2.82e-19!17;UBERON:0003060!2.82e-19!17;UBERON:0002417!1.34e-18!61;UBERON:0000916!1.34e-18!61;UBERON:0004876!1.51e-18!20;UBERON:0000489!2.91e-18!32;UBERON:0003887!1.69e-17!21;UBERON:0004211!2.80e-17!16;UBERON:0001285!2.80e-17!16;UBERON:0007684!2.80e-17!16;UBERON:0003220!2.80e-17!16;UBERON:0004208!2.80e-17!16;UBERON:0000058!1.44e-15!26;UBERON:0009569!3.16e-14!113;UBERON:0001851!6.66e-14!16;UBERON:0006554!1.14e-13!44;UBERON:0003064!2.93e-13!37;UBERON:0001008!2.96e-13!45;UBERON:0005177!4.09e-12!107;UBERON:0001225!1.64e-11!13;UBERON:0008987!1.64e-11!13;UBERON:0002046!8.30e-11!5;UBERON:0004117!8.30e-11!5;UBERON:0007689!8.30e-11!5;UBERON:0007123!8.30e-11!5;UBERON:0003091!8.30e-11!5;UBERON:0000466!8.84e-11!126;UBERON:0003886!2.56e-10!63;UBERON:0002553!8.20e-10!70;UBERON:0006853!1.23e-08!3;UBERON:0007685!1.23e-08!3;UBERON:0004134!1.23e-08!3;UBERON:0000464!1.62e-08!104;UBERON:0000353!2.04e-08!17;UBERON:0002368!2.37e-08!35;UBERON:0001778!5.42e-07!3;UBERON:0001775!5.42e-07!3;UBERON:0003103!6.02e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;8.35e-47;10!UBERON:0009773;8.35e-47;10!UBERON:0001231;8.35e-47;10!UBERON:0004810;8.35e-47;10!UBERON:0006555;7.52e-37;15!UBERON:0004819;7.52e-37;15!UBERON:0001285;7.52e-37;15!UBERON:0007684;7.52e-37;15!UBERON:0002113;3.04e-31;24!UBERON:0011143;3.04e-31;24!UBERON:0000489;2.26e-25;29!UBERON:0001225;9.21e-25;12!UBERON:0008987;9.21e-25;12!UBERON:0001851;1.45e-24;15!UBERON:0006554;1.96e-24;30!UBERON:0001008;1.96e-24;30!UBERON:0000353;1.46e-19;15!UBERON:0005172;2.70e-17;52!UBERON:0005173;2.70e-17;52!UBERON:0006853;1.26e-15;3!UBERON:0007685;1.26e-15;3!UBERON:0004134;1.26e-15;3!UBERON:0002417;4.73e-14;58!UBERON:0000916;4.73e-14;58!UBERON:0003567;1.06e-10;2!UBERON:0003838;1.06e-10;2!UBERON:0003586;1.06e-10;2!UBERON:0005169;1.06e-10;2!UBERON:0002321;1.06e-10;2!UBERON:0005215;1.06e-10;2!UBERON:0002303;1.06e-10;2!UBERON:0002319;1.06e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.19e-47,10;UBERON:0006555,5.25e-41,16;UBERON:0004819,5.25e-41,16;UBERON:0004211,7.42e-37,15;UBERON:0009773,7.42e-37,15;UBERON:0001231,7.42e-37,15;UBERON:0001285,7.42e-37,15;UBERON:0007684,7.42e-37,15;UBERON:0004208,7.42e-37,15;UBERON:0002113,2.56e-33,26;UBERON:0003918,2.56e-33,26;UBERON:0011143,2.56e-33,26;UBERON:0005095,2.56e-33,26;UBERON:0007687,2.56e-33,26;UBERON:0005172,4.40e-31,54;UBERON:0005173,4.40e-31,54;UBERON:0002417,1.65e-27,60;UBERON:0000916,1.65e-27,60;UBERON:0000489,1.91e-27,31;UBERON:0001225,9.68e-25,12;UBERON:0008987,9.68e-25,12;UBERON:0001851,1.31e-24,15;UBERON:0006554,1.08e-19,47;UBERON:0000353,1.52e-19,15;UBERON:0001008,3.25e-19,48;UBERON:0009569,9.68e-16,112;UBERON:0006853,1.39e-15,3;UBERON:0007685,1.39e-15,3;UBERON:0004134,1.39e-15,3;UBERON:0005177,1.77e-14,101;UBERON:0003103,7.30e-11,68;UBERON:0003567,1.53e-10,2;UBERON:0003838,1.53e-10,2;UBERON:0003586,1.53e-10,2;UBERON:0005169,1.53e-10,2;UBERON:0002321,1.53e-10,2;UBERON:0005215,1.53e-10,2;UBERON:0002303,1.53e-10,2;UBERON:0002319,1.53e-10,2;UBERON:0005103,1.17e-09,8;UBERON:0000083,1.17e-09,8;UBERON:0009201,1.17e-09,8;UBERON:0006553,1.17e-09,8;UBERON:0003074,1.17e-09,8;UBERON:0003060,1.17e-09,8;UBERON:0003104,1.39e-09,160;UBERON:0009142,1.39e-09,160;UBERON:0000080,1.35e-08,9;UBERON:0002120,1.35e-08,9;UBERON:0004875,1.35e-08,9;UBERON:0005721,1.35e-08,9;UBERON:0005754,1.35e-08,9;UBERON:0007297,1.35e-08,9;UBERON:0003914,4.01e-08,117;UBERON:0002100,1.38e-07,199;UBERON:0004876,4.80e-07,11 | |||
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| ||
|short_description=p4@DCDC2 | |short_description=p4@DCDC2 | ||
}} | }} |
Latest revision as of 05:40, 17 September 2015
Short description: | p4@DCDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DCDC2_5end |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | 154bp_to_ENST00000378454, ENST00000451359, NM_016356, uc003ndx.2_5end |
EntrezGene: | DCDC2 |
HGNC: | 18141 |
UniProt: | Q9UHG0E9PGI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.19e-47 | 10 |
nephron tubule epithelial cell | 8.19e-47 | 10 |
epithelial cell of nephron | 7.42e-37 | 15 |
kidney cell | 2.91e-32 | 17 |
kidney epithelial cell | 2.91e-32 | 17 |
kidney cortical cell | 9.68e-25 | 12 |
renal cortical epithelial cell | 9.68e-25 | 12 |
brush border epithelial cell | 1.39e-15 | 3 |
kidney cortex tubule cell | 1.39e-15 | 3 |
epithelial cell of proximal tubule | 1.39e-15 | 3 |
epithelial cell | 6.86e-14 | 253 |
mesangial cell | 1.53e-10 | 2 |
kidney interstitial cell | 1.53e-10 | 2 |
juxtaglomerular complex cell | 1.53e-10 | 2 |
renal interstitial pericyte | 1.53e-10 | 2 |
extraglomerular mesangial cell | 1.53e-10 | 2 |
hepatocyte | 5.80e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.71e-14 | 25 |
clear cell adenocarcinoma | 4.27e-11 | 2 |
female reproductive organ cancer | 1.95e-10 | 27 |
reproductive organ cancer | 1.25e-09 | 29 |
disease of anatomical entity | 1.64e-08 | 39 |
carcinoma | 3.80e-07 | 106 |
cell type cancer | 4.04e-07 | 143 |