FFCP PHASE1:Hg19::chr8:145159014..145159031,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:145159014..145159031,- to FFCP PHASE1:Hg19::chr8:145159014..145159031,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81858 | |EntrezGene=81858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25321 | |HGNC=25321 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000534435_5end | |||
|cluster_id=chr8:145159014..145159031,- | |||
|description=CAGE_peak_4_at_SHARPIN_5end | |||
|id=chr8:145159014..145159031,- | |||
|ontology_enrichment_celltype=CL:0000066!5.10e-18!254;CL:0002321!3.55e-09!248;CL:0000220!1.21e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.41e-17;15!CL:1000497;2.09e-15;17!CL:0002518;2.09e-15;17!CL:1000507;4.36e-14;10!CL:1000494;4.36e-14;10!CL:1000746;7.79e-13;7!CL:1000612;7.79e-13;7!CL:0000650;4.88e-12;2!CL:1000500;4.88e-12;2!CL:1000618;4.88e-12;2!CL:1001318;4.88e-12;2!CL:0002173;4.88e-12;2!CL:0002681;2.44e-11;12!CL:0002584;2.44e-11;12!CL:0000064;2.59e-08;3!CL:0000067;2.59e-08;3!CL:0005012;2.59e-08;3!CL:0002304;2.59e-08;3!CL:0000182;6.45e-08;12!CL:0000075;7.93e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.22e-17,15;CL:1000497,1.84e-15,17;CL:0002518,1.84e-15,17;CL:1000507,5.47e-14,10;CL:1000494,5.47e-14,10;CL:1000746,5.55e-13,7;CL:1000612,5.55e-13,7;CL:0000650,5.81e-12,2;CL:1000500,5.81e-12,2;CL:1000618,5.81e-12,2;CL:1001318,5.81e-12,2;CL:0002173,5.81e-12,2;CL:0002681,2.24e-11,12;CL:0002584,2.24e-11,12;CL:0000066,1.50e-09,253;CL:0000064,2.01e-08,3;CL:0000067,2.01e-08,3;CL:0005012,2.01e-08,3;CL:0002304,2.01e-08,3;CL:0000182,6.30e-08,12;CL:0000075,7.19e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.44e-13!235;DOID:305!1.51e-13!106;DOID:14566!2.28e-13!239;DOID:0050687!1.01e-12!143;DOID:299!1.82e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!4.82e-07!27;UBERON:0003918!4.82e-07!27;UBERON:0005095!4.82e-07!27;UBERON:0007687!4.82e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.41e-17;15!UBERON:0004819;1.41e-17;15!UBERON:0001285;1.41e-17;15!UBERON:0007684;1.41e-17;15!UBERON:0004211;4.36e-14;10!UBERON:0009773;4.36e-14;10!UBERON:0001231;4.36e-14;10!UBERON:0004810;4.36e-14;10!UBERON:0002113;8.28e-14;24!UBERON:0011143;8.28e-14;24!UBERON:0000074;7.79e-13;7!UBERON:0001229;7.79e-13;7!UBERON:0003567;4.88e-12;2!UBERON:0003838;4.88e-12;2!UBERON:0003586;4.88e-12;2!UBERON:0005169;4.88e-12;2!UBERON:0002321;4.88e-12;2!UBERON:0005215;4.88e-12;2!UBERON:0002303;4.88e-12;2!UBERON:0002319;4.88e-12;2!UBERON:0001225;2.44e-11;12!UBERON:0008987;2.44e-11;12!UBERON:0000489;3.20e-11;29!UBERON:0006554;8.31e-11;30!UBERON:0001008;8.31e-11;30!UBERON:0005172;2.00e-09;52!UBERON:0005173;2.00e-09;52!UBERON:0001851;5.01e-09;15!UBERON:0000353;5.01e-09;15!UBERON:0001778;2.59e-08;3!UBERON:0001775;2.59e-08;3!UBERON:0002417;1.04e-07;58!UBERON:0000916;1.04e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.22e-17,15;UBERON:0009773,1.22e-17,15;UBERON:0001231,1.22e-17,15;UBERON:0001285,1.22e-17,15;UBERON:0007684,1.22e-17,15;UBERON:0004208,1.22e-17,15;UBERON:0006555,1.75e-16,16;UBERON:0004819,1.75e-16,16;UBERON:0004810,5.47e-14,10;UBERON:0010532,5.55e-13,7;UBERON:0000074,5.55e-13,7;UBERON:0001229,5.55e-13,7;UBERON:0001230,5.55e-13,7;UBERON:0003220,5.55e-13,7;UBERON:0005749,5.55e-13,7;UBERON:0004199,5.55e-13,7;UBERON:0004209,5.55e-13,7;UBERON:0004198,5.55e-13,7;UBERON:0005172,8.49e-13,54;UBERON:0005173,8.49e-13,54;UBERON:0002113,9.78e-13,26;UBERON:0003918,9.78e-13,26;UBERON:0011143,9.78e-13,26;UBERON:0005095,9.78e-13,26;UBERON:0007687,9.78e-13,26;UBERON:0003567,5.81e-12,2;UBERON:0003838,5.81e-12,2;UBERON:0003586,5.81e-12,2;UBERON:0005169,5.81e-12,2;UBERON:0002321,5.81e-12,2;UBERON:0005215,5.81e-12,2;UBERON:0002303,5.81e-12,2;UBERON:0002319,5.81e-12,2;UBERON:0005103,2.24e-11,8;UBERON:0000083,2.24e-11,8;UBERON:0009201,2.24e-11,8;UBERON:0006553,2.24e-11,8;UBERON:0003074,2.24e-11,8;UBERON:0003060,2.24e-11,8;UBERON:0001225,2.24e-11,12;UBERON:0008987,2.24e-11,12;UBERON:0002417,2.79e-11,60;UBERON:0000916,2.79e-11,60;UBERON:0000489,1.73e-10,31;UBERON:0000080,3.99e-10,9;UBERON:0002120,3.99e-10,9;UBERON:0004875,3.99e-10,9;UBERON:0005721,3.99e-10,9;UBERON:0005754,3.99e-10,9;UBERON:0007297,3.99e-10,9;UBERON:0001851,4.69e-09,15;UBERON:0000353,4.69e-09,15;UBERON:0001778,2.01e-08,3;UBERON:0001775,2.01e-08,3;UBERON:0004876,2.66e-08,11;UBERON:0005177,4.27e-08,101;UBERON:0003887,1.29e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0.245733936501509,1.39560233594486,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0.612002073732759,0.940364164434263,0.286235987131057,0.273748850145768,0.251085279189606,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,1.13441780596881,0.665188192387692,1.58102614247627,2.5540919722054,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.550236083880135,0,0.258416759169329,0.35576626268671,0,0,0,0.732186172644509,0.367663080345869,0,0.446498641420399,0,0,1.53316637465883,0,0.366403487860815,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0.404132016209064,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0.286804595389004,1.09776335516636,0.397589304964456,0.813357600086629,0.725627385107593,1.51392510525377,0,0,0,0,0,0,0.591534000199219,0,0.241011029883482,0.661763836394364,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,0,1.10689594688802,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.927443239800615,0.70445216541493,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,1.17217447210047,0,0,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0,0.601892199455438,0,0,0,0.184369168541703,0.0868836144680828,0.979005787313703,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.710246901252508,0.164254312027618,0,0.348631135379878,0.966875596732978,0.601519410909855,0.184161977871793,0.34444334449382,0,0,0.451199612907412,0.15403067420883,5.49044838423799,2.92278449306521,0.316654886678627,0,0.340187410553031,0,1.54227252690289,1.08378575017541,1.50506932156456,0.254876273045038,0.831076008928724,1.11937377361089,0,0,0.512900250232778,0.984043937099117,0.325378394664303,0.412164046590889,0.183138929636687,0.577566499444116,0,0,0,0.580024309752732,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0.623224249527161,0,0.192190067365106,0,0,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0.424216295861138,0,0.551365343546124,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,1.49553699578462,0,0.245040215981032,0,0,0,0,0.997896857164083,0,0.211673582723883,0.973865820823666,0,0,0.156679895773023,0,0,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0.19538809540204,0.556812347790485,0,0,0,0,1.49712432326576,0,0.485442086998054,0,0,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0.19924798825107,0,1.25966373927138,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,1.18193840883968,0,0,0.520874984799877,0,0,0,0,0.295547618953547,0,0.762569244632931,0,0,0.341826167541004,0,0.269272933229316,1.08647371922008,0.31900115973192,0.183195186803725,0,0,0,0.166211681900156,0,0,0.167821586975843,0.37950746544837,0.317873157960757,1.05499032264014,0,0.989471500037586,0.216388639742091,0,0.176915129006678,0,0,0.123563938946503,0.208843899010911,0.067401132980677,0.802577647298789,0.234264445725339,0,0,1.45668227720456,0,0,0,0,0.450970258243478,0.311064574191741,0,0.661983911750998,0,0,0.853828638089378,0,0.520679215005393,0,0.261177619741208,0.34945333648406,0.687944129886466,0.19351266257817,0.0730893170861856,0.410577285266046,0.0969890164884194,0,0.225980740780532,0.411125773940253,0.19871461170299,0.189932387867636,0,0.160317640503067,0.213452994739353,0.39961921916426,0.576361668616424,0.458146384663663,0.686379991447858,0.14405479798815,0,0.235694034616795,0.135904206073614,0.313808538937,0.101998217636322,0.28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| ||
|short_description=p4@SHARPIN | |||
}} | }} |
Latest revision as of 00:53, 17 September 2015
Short description: | p4@SHARPIN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SHARPIN_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000534435_5end |
EntrezGene: | SHARPIN |
HGNC: | 25321 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.22e-17 | 15 |
kidney cell | 1.84e-15 | 17 |
kidney epithelial cell | 1.84e-15 | 17 |
kidney tubule cell | 5.47e-14 | 10 |
nephron tubule epithelial cell | 5.47e-14 | 10 |
glomerular cell | 5.55e-13 | 7 |
kidney corpuscule cell | 5.55e-13 | 7 |
mesangial cell | 5.81e-12 | 2 |
kidney interstitial cell | 5.81e-12 | 2 |
juxtaglomerular complex cell | 5.81e-12 | 2 |
renal interstitial pericyte | 5.81e-12 | 2 |
extraglomerular mesangial cell | 5.81e-12 | 2 |
kidney cortical cell | 2.24e-11 | 12 |
renal cortical epithelial cell | 2.24e-11 | 12 |
epithelial cell | 1.50e-09 | 253 |
ciliated cell | 2.01e-08 | 3 |
ciliated epithelial cell | 2.01e-08 | 3 |
multi-ciliated epithelial cell | 2.01e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.01e-08 | 3 |
hepatocyte | 6.30e-08 | 12 |
columnar/cuboidal epithelial cell | 7.19e-07 | 27 |