FFCP PHASE1:Hg19::chr11:17035519..17035539,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:17035519..17035539,+
|short_description=p1@OR7E14P
|description=CAGE_peak_1_at_OR7E14P_5end
|association_with_transcript=-5bp_to_ENST00000530490_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=8385 | |HGNC=8385 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000530490_5end | |||
|cluster_id=chr11:17035519..17035539,+ | |||
|description=CAGE_peak_1_at_OR7E14P_5end | |||
|id=chr11:17035519..17035539,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.05e-17!254;CL:1000449!1.49e-09!16;CL:1000497!1.02e-08!18;CL:0002518!1.02e-08!18;CL:1000507!1.68e-07!12;CL:1000494!1.68e-07!12;CL:0002681!3.50e-07!13;CL:0002584!3.50e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.10e-16;15!CL:1000507;1.62e-16;10!CL:1000494;1.62e-16;10!CL:1000497;3.00e-14;17!CL:0002518;3.00e-14;17!CL:0002681;2.57e-12;12!CL:0002584;2.57e-12;12!CL:0000182;1.45e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.34e-16,15;CL:1000507,1.66e-16,10;CL:1000494,1.66e-16,10;CL:1000497,3.55e-14,17;CL:0002518,3.55e-14,17;CL:0000066,6.62e-14,253;CL:0002681,3.00e-12,12;CL:0002584,3.00e-12,12;CL:0000182,1.34e-07,12;CL:0000223,2.11e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.11e-08;13 | |||
|ontology_enrichment_disease=DOID:305!1.30e-22!106;DOID:0050687!1.22e-16!143;DOID:299!1.24e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;2.87e-09;25!DOID:5093;3.47e-07;4!DOID:1612;3.47e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.01e-14,106;DOID:0050687,1.16e-09,143;DOID:299,2.77e-09,25;DOID:5093,3.64e-07,4;DOID:1612,3.64e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005177!2.52e-15!107;UBERON:0004921!1.04e-14!129;UBERON:0004185!1.04e-14!129;UBERON:0004119!3.94e-13!169;UBERON:0000925!3.94e-13!169;UBERON:0006595!3.94e-13!169;UBERON:0000489!4.64e-13!32;UBERON:0000077!6.60e-13!130;UBERON:0001007!7.21e-13!155;UBERON:0001555!7.21e-13!155;UBERON:0007026!7.21e-13!155;UBERON:0001008!7.73e-13!45;UBERON:0006554!3.38e-12!44;UBERON:0000466!3.89e-12!126;UBERON:0000481!1.47e-11!347;UBERON:0005172!1.94e-11!55;UBERON:0005173!1.94e-11!55;UBERON:0002113!3.30e-11!27;UBERON:0003918!3.30e-11!27;UBERON:0005095!3.30e-11!27;UBERON:0007687!3.30e-11!27;UBERON:0000058!5.66e-11!26;UBERON:0007023!8.71e-11!115;UBERON:0001041!1.34e-10!98;UBERON:0000080!1.38e-10!18;UBERON:0002120!1.38e-10!18;UBERON:0004875!1.38e-10!18;UBERON:0005721!1.38e-10!18;UBERON:0005754!1.38e-10!18;UBERON:0007297!1.38e-10!18;UBERON:0006555!4.25e-10!17;UBERON:0005103!4.25e-10!17;UBERON:0000083!4.25e-10!17;UBERON:0009201!4.25e-10!17;UBERON:0004819!4.25e-10!17;UBERON:0006553!4.25e-10!17;UBERON:0003074!4.25e-10!17;UBERON:0003060!4.25e-10!17;UBERON:0003064!5.84e-10!37;UBERON:0009569!6.04e-10!113;UBERON:0000464!1.28e-09!104;UBERON:0004211!1.49e-09!16;UBERON:0001285!1.49e-09!16;UBERON:0007684!1.49e-09!16;UBERON:0003220!1.49e-09!16;UBERON:0004208!1.49e-09!16;UBERON:0005911!4.35e-09!82;UBERON:0000477!4.73e-09!286;UBERON:0002417!5.51e-09!61;UBERON:0000916!5.51e-09!61;UBERON:0004876!7.42e-09!20;UBERON:0003887!7.68e-09!21;UBERON:0000063!5.39e-08!97;UBERON:0001048!1.54e-07!168;UBERON:0009773!1.68e-07!12;UBERON:0001231!1.68e-07!12;UBERON:0004810!1.68e-07!12;UBERON:0000065!1.85e-07!53;UBERON:0003104!1.97e-07!238;UBERON:0009142!1.97e-07!238;UBERON:0001225!3.50e-07!13;UBERON:0008987!3.50e-07!13;UBERON:0004111!3.81e-07!241;UBERON:0000064!5.18e-07!219;UBERON:0002553!6.82e-07!70;UBERON:0001851!6.84e-07!16;UBERON:0008947!6.99e-07!38;UBERON:0003258!6.99e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;6.32e-17;30!UBERON:0001008;6.32e-17;30!UBERON:0006555;1.10e-16;15!UBERON:0004819;1.10e-16;15!UBERON:0001285;1.10e-16;15!UBERON:0007684;1.10e-16;15!UBERON:0004211;1.62e-16;10!UBERON:0009773;1.62e-16;10!UBERON:0001231;1.62e-16;10!UBERON:0004810;1.62e-16;10!UBERON:0002113;2.74e-16;24!UBERON:0011143;2.74e-16;24!UBERON:0000489;7.18e-16;29!UBERON:0001225;2.57e-12;12!UBERON:0008987;2.57e-12;12!UBERON:0005172;8.47e-12;52!UBERON:0005173;8.47e-12;52!UBERON:0002423;2.49e-09;25!UBERON:0001851;2.56e-09;15!UBERON:0000353;2.56e-09;15!UBERON:0002417;8.70e-08;58!UBERON:0000916;8.70e-08;58!UBERON:0005177;2.69e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,9.38e-19,54;UBERON:0005173,9.38e-19,54;UBERON:0005177,1.68e-18,101;UBERON:0002113,5.02e-18,26;UBERON:0003918,5.02e-18,26;UBERON:0011143,5.02e-18,26;UBERON:0005095,5.02e-18,26;UBERON:0007687,5.02e-18,26;UBERON:0000489,1.21e-17,31;UBERON:0006555,1.39e-17,16;UBERON:0004819,1.39e-17,16;UBERON:0004211,1.34e-16,15;UBERON:0009773,1.34e-16,15;UBERON:0001231,1.34e-16,15;UBERON:0001285,1.34e-16,15;UBERON:0007684,1.34e-16,15;UBERON:0004208,1.34e-16,15;UBERON:0001008,1.37e-16,48;UBERON:0004810,1.66e-16,10;UBERON:0002417,6.45e-16,60;UBERON:0000916,6.45e-16,60;UBERON:0006554,1.44e-15,47;UBERON:0009569,6.29e-15,112;UBERON:0001225,3.00e-12,12;UBERON:0008987,3.00e-12,12;UBERON:0004921,1.54e-11,118;UBERON:0009856,4.29e-10,26;UBERON:0009497,2.30e-09,25;UBERON:0000015,2.30e-09,25;UBERON:0002423,2.30e-09,25;UBERON:0006235,2.30e-09,25;UBERON:0004161,2.30e-09,25;UBERON:0007499,2.55e-09,25;UBERON:0001851,2.88e-09,15;UBERON:0000353,2.88e-09,15;UBERON:0001007,3.48e-09,145;UBERON:0001555,3.48e-09,145;UBERON:0007026,3.48e-09,145;UBERON:0002100,6.59e-09,199;UBERON:0004119,8.26e-09,160;UBERON:0000925,8.26e-09,160;UBERON:0006595,8.26e-09,160;UBERON:0009854,1.05e-08,23;UBERON:0000058,2.68e-08,19;UBERON:0008835,6.02e-08,22;UBERON:0003894,6.02e-08,22;UBERON:0005911,1.33e-07,82;UBERON:0000080,4.08e-07,9;UBERON:0002120,4.08e-07,9;UBERON:0004875,4.08e-07,9;UBERON:0005721,4.08e-07,9;UBERON:0005754,4.08e-07,9;UBERON:0007297,4.08e-07,9;UBERON:0001041,5.45e-07,87;UBERON:0003103,6.74e-07,68 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,13.2696325710815,33.4944560626765,0,0,0.247532705920093,0,0,0,0,0,1.60057375499824,1.42800483870977,4.07491137921514,0,1.23186982565596,3.51519390865448,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0.111410456885174,0.883817722424512,0,1.08321545506006,0,0.520237390239513,0,0,0,0,0,1.04535523804977,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0.973269740605272,7.27918092163323,2.88248216701333,2.3715392137144,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,2.6834215348511,2.25300606146525,2.32387885739037,0.414644220061482,3.02785021050754,0.36497735907583,0,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.55146986366197,0.653638332277218,0.71181185733329,0.674156540800822,0.588664395376038,0.38474715694639,0,0,0,0,3.80265104465493,8.84544495009863,1.77236972004421,0,2.33678033231916,1.20097467208968,0,0,0,0,0,0,0,2.20267769452646,0,0.288732895522148,0,0.190254152234598,9.4824527755113,23.1791263765616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2632051389738,0.601519410909855,2.5782676902051,0,0,0,10.8287907097779,4.38987421495164,11.7652465376528,20.4594914514565,3.37765212457202,1.13733384070897,0,0.431831832204279,1.54227252690289,4.06419656315779,3.51182841698397,6.88165937221603,9.14183609821597,7.38786690583188,0,0,2.82095137628028,3.28014645699706,0.325378394664303,1.75169719801128,0.183138929636687,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0.960950336825531,0,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,1.69458841398202,0.86101074534246,0,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,2.63224820389132,2.39139409093234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,1.46508179271894,0.36408156524854,0,0,0,0,0,0,0.140669416410513,0,0.824019371133798,0.422250816255987,0.398495976502139,1.38141957765574,1.76352923497993,0.818149460017238,0.369254416383208,0,1.3480252672099,3.58042349351218,0,1.87422470710174,0,0,0,0.185536196323703,0,2.60427761085233,2.0990399999087,0.724999575434793,0.1137934482855,1.5255219017566,0.945550727071745,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,1.09692698576986,0,0.697118721393016,2.00070672109872,0,0.46112780877612,0.448788222048861,0.325942115766024,0.31900115973192,0,0,3.06579894587209,0,0,0,0,0,0,0,0.421996129056054,1.79556088975062,1.41353071433941,0.865554558968364,0,5.30745387020035,0,0,0,0,0.943615861729479,0,0.937057782901357,0,2.34797542718508,0,1.18375320854817,0,0,0.126373159256976,6.76455387365216,1.34794648816421,1.32930774541437,0,0.313932918407225,0,0.853828638089378,0,3.47119476670262,2.05784034570193,0.0870592065804026,1.57254001417827,0,0,0.0730893170861856,0.164230914106418,4.55848377495571,1.1473296469895,1.58186518546373,0,0,0.0633107959558787,2.54216797555244,0.480952921509202,4.26905989478705,0,6.05179752047245,0.572682980829578,0.686379991447858,1.58460277786965,0,1.17847017308398,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,1.16495949527454,6.93292004303568,7.66467482944848,7.1447756485436,5.21665652028169,0,0,0.681017030557878,1.76828463311521,1.37539436597234,0.83088067605837,0.2249738915515,0,0.121499113316049,0,13.5545816554621,5.92736845925479,0,0,0.383830394638891,1.42939065274673,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,4.25001477666439,0,0.387848869084652,0.26446520348538,1.36869470307464,11.2770403570668,0.854299300541557,1.41483874589699,0.414239055347196,0,1.97611631897944,0.60896299190448,1.27668251554036,0,0.7520696820681,0.919036730290385,0.655745261419609,0.942324577501406,0.886068179966986,0.122026264901963,0,1.72022758707021,2.88415533995816,0.372578417648301,1.24513771442608,0.874862855734746,0,0,0.470531639396343,6.08835377548946,3.91286777249228,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0,0,0,1.25362188757041,0.61760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| ||
|short_description=p1@OR7E14P | |||
}} | }} |
Latest revision as of 23:45, 16 September 2015
Short description: | p1@OR7E14P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OR7E14P_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000530490_5end |
EntrezGene: | NA |
HGNC: | 8385 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.34e-16 | 15 |
kidney tubule cell | 1.66e-16 | 10 |
nephron tubule epithelial cell | 1.66e-16 | 10 |
kidney cell | 3.55e-14 | 17 |
kidney epithelial cell | 3.55e-14 | 17 |
epithelial cell | 6.62e-14 | 253 |
kidney cortical cell | 3.00e-12 | 12 |
renal cortical epithelial cell | 3.00e-12 | 12 |
hepatocyte | 1.34e-07 | 12 |
endodermal cell | 2.11e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.01e-14 | 106 |
cell type cancer | 1.16e-09 | 143 |
adenocarcinoma | 2.77e-09 | 25 |
thoracic cancer | 3.64e-07 | 4 |
breast cancer | 3.64e-07 | 4 |