FFCP PHASE1:Hg19::chr5:169122140..169122157,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1794 | |EntrezGene=1794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2988 | |HGNC=2988 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000523684_5end | |association_with_transcript=-25bp_to_ENST00000523684_5end | ||
|cluster_id=chr5:169122140..169122157,+ | |||
|coexpression_cluster_id=C199 | |||
|description=CAGE_peak_3_at_DOCK2_5end | |description=CAGE_peak_3_at_DOCK2_5end | ||
|id=chr5:169122140..169122157,+ | |id=chr5:169122140..169122157,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.09e-17!23;CL:0000055!4.58e-15!180;CL:0000057!1.15e-08!75;CL:0000548!1.54e-08!679;CL:0000004!1.54e-08!679;CL:0000255!1.54e-08!679;CL:0000012!2.34e-08!682;CL:0000144!1.75e-07!625;CL:0000306!2.48e-07!4;CL:0002222!2.48e-07!4;CL:0002224!2.48e-07!4;CL:0000515!5.92e-07!4 | |ontology_enrichment_celltype=CL:0002620!1.09e-17!23;CL:0000055!4.58e-15!180;CL:0000057!1.15e-08!75;CL:0000548!1.54e-08!679;CL:0000004!1.54e-08!679;CL:0000255!1.54e-08!679;CL:0000012!2.34e-08!682;CL:0000144!1.75e-07!625;CL:0000306!2.48e-07!4;CL:0002222!2.48e-07!4;CL:0002224!2.48e-07!4;CL:0000515!5.92e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000497;8.46e-17;17!CL:0002518;8.46e-17;17!CL:1000507;4.32e-15;10!CL:1000494;4.32e-15;10!CL:0000306;8.28e-15;4!CL:0002222;8.28e-15;4!CL:0002224;8.28e-15;4!CL:1000449;4.67e-14;15!CL:0002681;2.45e-12;12!CL:0002584;2.45e-12;12!CL:0000239;7.29e-09;3!CL:1000615;7.29e-09;3!CL:0002306;7.29e-09;3!CL:0002620;8.90e-09;23!CL:0000075;1.25e-07;27!CL:0000228;2.91e-07;1!CL:0000342;2.91e-07;1!CL:0002565;2.91e-07;1!CL:0002372;2.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,5.60e-17,17;CL:0002518,5.60e-17,17;CL:1000507,2.65e-15,10;CL:1000494,2.65e-15,10;CL:0000306,7.56e-15,4;CL:0002222,7.56e-15,4;CL:0002224,7.56e-15,4;CL:1000449,3.14e-14,15;CL:0002681,1.62e-12,12;CL:0002584,1.62e-12,12;CL:0000239,5.29e-09,3;CL:1000615,5.29e-09,3;CL:0002306,5.29e-09,3;CL:0002620,1.19e-08,23;CL:0000075,1.17e-07,27;CL:0000342,2.50e-07,1;CL:0002565,2.50e-07,1;CL:0000228,3.20e-07,1;CL:0002372,3.20e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!5.05e-14!11;UBERON:0002097!8.62e-12!40;UBERON:0002199!6.94e-11!45;UBERON:0002416!6.94e-11!45;UBERON:0000475!1.72e-10!365;UBERON:0000019!1.72e-08!19;UBERON:0000047!1.72e-08!19;UBERON:0004088!1.72e-08!19;UBERON:0003072!1.72e-08!19;UBERON:0003071!1.72e-08!19;UBERON:0004128!1.72e-08!19;UBERON:0001801!3.95e-08!14;UBERON:0000970!6.32e-08!20;UBERON:0000020!1.16e-07!23;UBERON:0002104!2.04e-07!21;UBERON:0001456!2.04e-07!21;UBERON:0010077!2.48e-07!4;UBERON:0005389!2.48e-07!4;UBERON:0000484!2.48e-07!4;UBERON:0002546!2.48e-07!4;UBERON:0000965!2.48e-07!4;UBERON:0001803!2.48e-07!4;UBERON:0003073!2.48e-07!4;UBERON:0005426!2.48e-07!4;UBERON:0001032!3.23e-07!24;UBERON:0004456!3.23e-07!24;UBERON:0000488!4.91e-07!4;UBERON:0002203!9.93e-07!6;UBERON:0001768!9.93e-07!6 | |ontology_enrichment_uberon=UBERON:0007625!5.05e-14!11;UBERON:0002097!8.62e-12!40;UBERON:0002199!6.94e-11!45;UBERON:0002416!6.94e-11!45;UBERON:0000475!1.72e-10!365;UBERON:0000019!1.72e-08!19;UBERON:0000047!1.72e-08!19;UBERON:0004088!1.72e-08!19;UBERON:0003072!1.72e-08!19;UBERON:0003071!1.72e-08!19;UBERON:0004128!1.72e-08!19;UBERON:0001801!3.95e-08!14;UBERON:0000970!6.32e-08!20;UBERON:0000020!1.16e-07!23;UBERON:0002104!2.04e-07!21;UBERON:0001456!2.04e-07!21;UBERON:0010077!2.48e-07!4;UBERON:0005389!2.48e-07!4;UBERON:0000484!2.48e-07!4;UBERON:0002546!2.48e-07!4;UBERON:0000965!2.48e-07!4;UBERON:0001803!2.48e-07!4;UBERON:0003073!2.48e-07!4;UBERON:0005426!2.48e-07!4;UBERON:0001032!3.23e-07!24;UBERON:0004456!3.23e-07!24;UBERON:0000488!4.91e-07!4;UBERON:0002203!9.93e-07!6;UBERON:0001768!9.93e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.63e-19;11!UBERON:0004211;4.32e-15;10!UBERON:0009773;4.32e-15;10!UBERON:0001231;4.32e-15;10!UBERON:0004810;4.32e-15;10!UBERON:0010077;8.28e-15;4!UBERON:0005389;8.28e-15;4!UBERON:0000484;8.28e-15;4!UBERON:0000965;8.28e-15;4!UBERON:0001803;8.28e-15;4!UBERON:0006555;4.67e-14;15!UBERON:0004819;4.67e-14;15!UBERON:0001285;4.67e-14;15!UBERON:0007684;4.67e-14;15!UBERON:0001225;2.45e-12;12!UBERON:0008987;2.45e-12;12!UBERON:0002113;1.19e-11;24!UBERON:0011143;1.19e-11;24!UBERON:0000019;4.46e-11;19!UBERON:0000047;4.46e-11;19!UBERON:0004088;4.46e-11;19!UBERON:0010230;4.46e-11;19!UBERON:0001801;7.93e-11;14!UBERON:0000970;1.70e-10;20!UBERON:0002104;5.71e-10;21!UBERON:0001456;5.71e-10;21!UBERON:0001851;7.88e-10;15!UBERON:0000353;7.88e-10;15!UBERON:0000489;1.71e-09;29!UBERON:0006554;3.79e-09;30!UBERON:0001008;3.79e-09;30!UBERON:0000020;4.70e-09;23!UBERON:0006853;7.29e-09;3!UBERON:0007685;7.29e-09;3!UBERON:0004134;7.29e-09;3!UBERON:0010371;7.32e-09;31!UBERON:0001032;1.18e-08;24!UBERON:0004456;1.18e-08;24!UBERON:0002506;2.91e-07;1!UBERON:0001769;2.91e-07;1!UBERON:0000488;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.41e-19,11;UBERON:0004810,2.65e-15,10;UBERON:0010077,7.56e-15,4;UBERON:0005389,7.56e-15,4;UBERON:0000484,7.56e-15,4;UBERON:0002546,7.56e-15,4;UBERON:0000965,7.56e-15,4;UBERON:0001803,7.56e-15,4;UBERON:0003073,7.56e-15,4;UBERON:0005426,7.56e-15,4;UBERON:0004211,3.14e-14,15;UBERON:0009773,3.14e-14,15;UBERON:0001231,3.14e-14,15;UBERON:0001285,3.14e-14,15;UBERON:0007684,3.14e-14,15;UBERON:0004208,3.14e-14,15;UBERON:0006555,2.62e-13,16;UBERON:0004819,2.62e-13,16;UBERON:0001225,1.62e-12,12;UBERON:0008987,1.62e-12,12;UBERON:0001801,7.94e-11,14;UBERON:0002113,8.42e-11,26;UBERON:0003918,8.42e-11,26;UBERON:0011143,8.42e-11,26;UBERON:0005095,8.42e-11,26;UBERON:0007687,8.42e-11,26;UBERON:0000019,1.57e-10,20;UBERON:0000047,1.57e-10,20;UBERON:0010312,1.57e-10,20;UBERON:0004088,1.57e-10,20;UBERON:0010230,1.57e-10,20;UBERON:0003072,1.57e-10,20;UBERON:0004128,1.57e-10,20;UBERON:0003071,1.57e-10,20;UBERON:0000970,5.31e-10,21;UBERON:0002104,5.31e-10,21;UBERON:0001851,5.69e-10,15;UBERON:0000353,5.69e-10,15;UBERON:0001456,1.60e-09,22;UBERON:0006853,5.29e-09,3;UBERON:0007685,5.29e-09,3;UBERON:0004134,5.29e-09,3;UBERON:0000489,6.44e-09,31;UBERON:0000020,1.11e-08,24;UBERON:0001032,1.11e-08,24;UBERON:0004456,1.11e-08,24;UBERON:0000076,1.18e-07,8;UBERON:0002506,2.50e-07,1;UBERON:0001769,2.50e-07,1;UBERON:0000488,7.95e-07,4 | |||
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| ||
|short_description=p3@DOCK2 | |short_description=p3@DOCK2 | ||
}} | }} |
Latest revision as of 20:45, 16 September 2015
Short description: | p3@DOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DOCK2_5end |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | -25bp_to_ENST00000523684_5end |
EntrezGene: | DOCK2 |
HGNC: | 2988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 5.60e-17 | 17 |
kidney epithelial cell | 5.60e-17 | 17 |
kidney tubule cell | 2.65e-15 | 10 |
nephron tubule epithelial cell | 2.65e-15 | 10 |
crystallin accumulating cell | 7.56e-15 | 4 |
vertebrate lens cell | 7.56e-15 | 4 |
lens epithelial cell | 7.56e-15 | 4 |
epithelial cell of nephron | 3.14e-14 | 15 |
kidney cortical cell | 1.62e-12 | 12 |
renal cortical epithelial cell | 1.62e-12 | 12 |
brush border epithelial cell | 5.29e-09 | 3 |
kidney cortex tubule cell | 5.29e-09 | 3 |
epithelial cell of proximal tubule | 5.29e-09 | 3 |
skin fibroblast | 1.19e-08 | 23 |
columnar/cuboidal epithelial cell | 1.17e-07 | 27 |
pigment cell (sensu Vertebrata) | 2.50e-07 | 1 |
iris pigment epithelial cell | 2.50e-07 | 1 |
multinucleate cell | 3.20e-07 | 1 |
myotube | 3.20e-07 | 1 |