FFCP PHASE1:Hg19::chr16:4845357..4845375,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440335 | |EntrezGene=440335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_NM_001253793,NM_001253794,NR_029455_5end | |association_with_transcript=-3bp_to_NM_001253793,NM_001253794,NR_029455_5end | ||
|cluster_id=chr16:4845357..4845375,+ | |||
|description=CAGE_peak_2_at_LOC440335_5end | |description=CAGE_peak_2_at_LOC440335_5end | ||
|id=chr16:4845357..4845375,+ | |id=chr16:4845357..4845375,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.49e-14!254;CL:0000223!5.54e-09!59;CL:0002076!9.66e-09!43;CL:0000082!6.45e-08!19;CL:0000453!1.41e-07!5;CL:0000244!2.86e-07!4;CL:0000731!2.86e-07!4 | |ontology_enrichment_celltype=CL:0000066!5.49e-14!254;CL:0000223!5.54e-09!59;CL:0002076!9.66e-09!43;CL:0000082!6.45e-08!19;CL:0000453!1.41e-07!5;CL:0000244!2.86e-07!4;CL:0000731!2.86e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;7.89e-08;4!CL:0000731;7.89e-08;4!CL:0001014;2.15e-07;2!CL:0001016;2.15e-07;2!CL:1000415;4.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.18e-08,4;CL:0000731,8.18e-08,4;CL:0001014,2.30e-07,2;CL:0001016,2.30e-07,2;CL:1000415,4.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.11e-10;30!UBERON:0008947;1.23e-08;29!UBERON:0006595;1.30e-08;86!UBERON:0007297;5.71e-07;2 | |||
|ontology_enrichment_disease=DOID:305!1.86e-20!106;DOID:0050687!9.73e-16!143;DOID:299!5.79e-10!25;DOID:162!5.84e-07!235;DOID:0050615!6.29e-07!16 | |ontology_enrichment_disease=DOID:305!1.86e-20!106;DOID:0050687!9.73e-16!143;DOID:299!5.79e-10!25;DOID:162!5.84e-07!235;DOID:0050615!6.29e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:299;1.42e-13;25!DOID:0050615;6.62e-09;16!DOID:5093;4.75e-08;4!DOID:1612;4.75e-08;4!DOID:3119;1.19e-07;14!DOID:3493;1.93e-07;2!DOID:1324;5.08e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.28e-16,106;DOID:0050687,1.65e-13,143;DOID:299,1.70e-13,25;DOID:0050615,6.18e-09,16;DOID:5093,5.23e-08,4;DOID:1612,5.23e-08,4;DOID:162,7.63e-08,235;DOID:3119,1.35e-07,14;DOID:14566,1.62e-07,239;DOID:3493,2.23e-07,2;DOID:1324,4.72e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.02e-28!169;UBERON:0000925!2.02e-28!169;UBERON:0006595!2.02e-28!169;UBERON:0004921!1.96e-24!129;UBERON:0004185!1.96e-24!129;UBERON:0001007!2.08e-23!155;UBERON:0001555!2.08e-23!155;UBERON:0007026!2.08e-23!155;UBERON:0000077!1.14e-19!130;UBERON:0001041!3.42e-16!98;UBERON:0001004!1.74e-15!72;UBERON:0000065!4.35e-15!53;UBERON:0000464!1.94e-13!104;UBERON:0008947!3.39e-13!38;UBERON:0003258!3.39e-13!38;UBERON:0000466!4.30e-13!126;UBERON:0005911!6.00e-13!82;UBERON:0005178!1.89e-11!34;UBERON:0002224!1.89e-11!34;UBERON:0005181!5.70e-11!35;UBERON:0002048!6.59e-11!22;UBERON:0000117!6.59e-11!22;UBERON:0000171!6.59e-11!22;UBERON:0000170!6.59e-11!22;UBERON:0005597!6.59e-11!22;UBERON:0000118!6.59e-11!22;UBERON:0005177!1.02e-10!107;UBERON:0005409!1.17e-10!35;UBERON:0000072!1.98e-10!46;UBERON:0005153!4.85e-10!37;UBERON:0000160!5.18e-10!27;UBERON:0003104!5.15e-09!238;UBERON:0009142!5.15e-09!238;UBERON:0000915!1.08e-08!52;UBERON:0002294!1.37e-08!7;UBERON:0001173!1.37e-08!7;UBERON:0004912!1.37e-08!7;UBERON:0009569!2.02e-08!113;UBERON:0004802!6.45e-08!19;UBERON:0000115!6.45e-08!19;UBERON:0004175!7.29e-08!25;UBERON:0005157!1.25e-07!51;UBERON:0004807!2.18e-07!28 | |ontology_enrichment_uberon=UBERON:0004119!2.02e-28!169;UBERON:0000925!2.02e-28!169;UBERON:0006595!2.02e-28!169;UBERON:0004921!1.96e-24!129;UBERON:0004185!1.96e-24!129;UBERON:0001007!2.08e-23!155;UBERON:0001555!2.08e-23!155;UBERON:0007026!2.08e-23!155;UBERON:0000077!1.14e-19!130;UBERON:0001041!3.42e-16!98;UBERON:0001004!1.74e-15!72;UBERON:0000065!4.35e-15!53;UBERON:0000464!1.94e-13!104;UBERON:0008947!3.39e-13!38;UBERON:0003258!3.39e-13!38;UBERON:0000466!4.30e-13!126;UBERON:0005911!6.00e-13!82;UBERON:0005178!1.89e-11!34;UBERON:0002224!1.89e-11!34;UBERON:0005181!5.70e-11!35;UBERON:0002048!6.59e-11!22;UBERON:0000117!6.59e-11!22;UBERON:0000171!6.59e-11!22;UBERON:0000170!6.59e-11!22;UBERON:0005597!6.59e-11!22;UBERON:0000118!6.59e-11!22;UBERON:0005177!1.02e-10!107;UBERON:0005409!1.17e-10!35;UBERON:0000072!1.98e-10!46;UBERON:0005153!4.85e-10!37;UBERON:0000160!5.18e-10!27;UBERON:0003104!5.15e-09!238;UBERON:0009142!5.15e-09!238;UBERON:0000915!1.08e-08!52;UBERON:0002294!1.37e-08!7;UBERON:0001173!1.37e-08!7;UBERON:0004912!1.37e-08!7;UBERON:0009569!2.02e-08!113;UBERON:0004802!6.45e-08!19;UBERON:0000115!6.45e-08!19;UBERON:0004175!7.29e-08!25;UBERON:0005157!1.25e-07!51;UBERON:0004807!2.18e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.92e-21;22!UBERON:0004921;8.63e-18;33!UBERON:0000160;4.05e-16;17!UBERON:0002294;1.52e-15;7!UBERON:0001173;1.52e-15;7!UBERON:0000058;1.70e-14;10!UBERON:0002108;7.25e-11;4!UBERON:0000059;5.57e-10;11!UBERON:0006947;8.81e-10;3!UBERON:0004054;8.81e-10;3!UBERON:0002110;8.95e-10;3!UBERON:0004175;2.45e-08;21!UBERON:0002394;9.74e-08;4!UBERON:0003928;9.74e-08;4!UBERON:0002048;1.03e-07;22!UBERON:0000117;1.03e-07;22!UBERON:0000171;1.03e-07;22!UBERON:0000170;1.03e-07;22!UBERON:0001041;1.68e-07;14!UBERON:0005904;1.94e-07;4!UBERON:0003127;5.71e-07;2!UBERON:0001829;5.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.18e-18,25;UBERON:0004119,4.10e-17,160;UBERON:0000925,4.10e-17,160;UBERON:0006595,4.10e-17,160;UBERON:0000160,3.23e-16,17;UBERON:0004921,1.22e-14,118;UBERON:0001007,1.03e-13,145;UBERON:0001555,1.03e-13,145;UBERON:0007026,1.03e-13,145;UBERON:0002294,5.58e-12,9;UBERON:0001173,5.58e-12,9;UBERON:0004912,5.58e-12,9;UBERON:0002108,7.17e-11,4;UBERON:0000059,4.51e-10,11;UBERON:0002110,7.67e-10,3;UBERON:0006242,7.67e-10,3;UBERON:0006947,7.91e-10,3;UBERON:0004054,7.91e-10,3;UBERON:0000058,2.82e-09,19;UBERON:0001041,3.55e-09,87;UBERON:0004175,1.81e-08,25;UBERON:0005177,4.06e-08,101;UBERON:0005911,7.93e-08,82;UBERON:0002048,9.86e-08,22;UBERON:0000117,9.86e-08,22;UBERON:0000171,9.86e-08,22;UBERON:0000170,9.86e-08,22;UBERON:0005597,9.86e-08,22;UBERON:0000118,9.86e-08,22;UBERON:0009569,1.04e-07,112;UBERON:0005904,1.80e-07,4;UBERON:0000915,3.18e-07,52;UBERON:0005178,4.26e-07,34;UBERON:0002224,4.26e-07,34;UBERON:0001829,4.32e-07,2;UBERON:0003127,6.08e-07,2;UBERON:0005181,7.68e-07,35 | |||
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| ||
|short_description=p2@LOC440335 | |short_description=p2@LOC440335 | ||
}} | }} |
Latest revision as of 19:04, 16 September 2015
Short description: | p2@LOC440335 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC440335_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_NM_001253793, NM_001253794, NR_029455_5end |
EntrezGene: | LOC440335 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.18e-08 | 4 |
urothelial cell | 8.18e-08 | 4 |
CD1a-positive Langerhans cell | 2.30e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.30e-07 | 2 |
epithelial cell of gall bladder | 4.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.28e-16 | 106 |
cell type cancer | 1.65e-13 | 143 |
adenocarcinoma | 1.70e-13 | 25 |
respiratory system cancer | 6.18e-09 | 16 |
thoracic cancer | 5.23e-08 | 4 |
breast cancer | 5.23e-08 | 4 |
cancer | 7.63e-08 | 235 |
gastrointestinal system cancer | 1.35e-07 | 14 |
disease of cellular proliferation | 1.62e-07 | 239 |
signet ring cell adenocarcinoma | 2.23e-07 | 2 |
lung cancer | 4.72e-07 | 15 |