FFCP PHASE1:Hg19::chr3:170213152..170213154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33365 | |HGNC=33365 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-261bp_to_ENST00000463294_5end | |association_with_transcript=-261bp_to_ENST00000463294_5end | ||
|cluster_id=chr3:170213152..170213154,+ | |||
|coexpression_cluster_id=C819 | |||
|description=CAGE_peak_1_at_KRT8P13_5end | |description=CAGE_peak_1_at_KRT8P13_5end | ||
|id=chr3:170213152..170213154,+ | |id=chr3:170213152..170213154,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.72e-49!254;CL:0000223!1.73e-17!59;CL:0002076!1.15e-11!43;CL:0000077!1.41e-09!19;CL:0000082!2.33e-08!19 | |ontology_enrichment_celltype=CL:0000066!2.72e-49!254;CL:0000223!1.73e-17!59;CL:0002076!1.15e-11!43;CL:0000077!1.41e-09!19;CL:0000082!2.33e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.88e-11;19!CL:1000507;7.67e-10;10!CL:1000494;7.67e-10;10!CL:0000239;1.49e-09;3!CL:1000615;1.49e-09;3!CL:0002306;1.49e-09;3!CL:0000077;6.57e-09;19!CL:0002577;1.04e-08;3!CL:1000449;1.20e-08;15!CL:0002681;3.42e-08;12!CL:0002584;3.42e-08;12!CL:1000497;1.68e-07;17!CL:0002518;1.68e-07;17!CL:0002536;3.27e-07;2!CL:0000306;7.13e-07;4!CL:0002222;7.13e-07;4!CL:0002224;7.13e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.07e-22,253;CL:0000349,8.07e-11,19;CL:1000507,4.94e-10,10;CL:1000494,4.94e-10,10;CL:0000239,1.28e-09,3;CL:1000615,1.28e-09,3;CL:0002306,1.28e-09,3;CL:0002577,4.02e-09,3;CL:0000077,4.70e-09,19;CL:1000449,8.46e-09,15;CL:0000223,1.31e-08,58;CL:0002681,2.27e-08,12;CL:0002584,2.27e-08,12;CL:1000497,1.24e-07,17;CL:0002518,1.24e-07,17;CL:0002536,2.91e-07,2;CL:0002076,4.00e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.18e-34!106;DOID:0050687!1.28e-25!143;DOID:162!7.14e-19!235;DOID:14566!8.73e-18!239;DOID:299!6.71e-12!25;DOID:7!2.04e-08!39;DOID:0050615!1.96e-07!16;DOID:1324!5.29e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:299;9.46e-15;25!DOID:5093;9.59e-08;4!DOID:1612;9.59e-08;4!DOID:3493;3.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.18e-14,25;DOID:305,1.95e-09,106;DOID:0050687,2.06e-08,143;DOID:5093,9.54e-08,4;DOID:1612,9.54e-08,4;DOID:162,2.35e-07,235;DOID:3493,3.19e-07,2;DOID:14566,4.96e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.78e-26!169;UBERON:0000925!5.78e-26!169;UBERON:0006595!5.78e-26!169;UBERON:0001007!3.13e-21!155;UBERON:0001555!3.13e-21!155;UBERON:0007026!3.13e-21!155;UBERON:0004921!4.33e-20!129;UBERON:0004185!4.33e-20!129;UBERON:0000077!4.43e-20!130;UBERON:0005911!6.33e-19!82;UBERON:0001041!3.16e-17!98;UBERON:0001048!2.26e-15!168;UBERON:0005177!1.77e-14!107;UBERON:0003104!6.56e-13!238;UBERON:0009142!6.56e-13!238;UBERON:0000466!9.96e-13!126;UBERON:0009569!1.46e-12!113;UBERON:0000481!3.15e-12!347;UBERON:0005172!3.87e-12!55;UBERON:0005173!3.87e-12!55;UBERON:0008947!7.56e-12!38;UBERON:0003258!7.56e-12!38;UBERON:0003929!1.36e-11!54;UBERON:0000065!1.57e-11!53;UBERON:0009856!2.74e-11!26;UBERON:0001004!3.63e-11!72;UBERON:0007499!9.93e-11!25;UBERON:0000072!1.28e-10!46;UBERON:0009497!2.35e-10!25;UBERON:0000015!2.35e-10!25;UBERON:0002423!2.35e-10!25;UBERON:0006235!2.35e-10!25;UBERON:0004161!2.35e-10!25;UBERON:0002417!7.62e-10!61;UBERON:0000916!7.62e-10!61;UBERON:0005631!1.05e-09!14;UBERON:0000158!1.05e-09!14;UBERON:0000063!5.53e-09!97;UBERON:0009854!5.55e-09!23;UBERON:0004807!1.55e-08!28;UBERON:0008835!1.94e-08!22;UBERON:0003894!1.94e-08!22;UBERON:0004802!2.33e-08!19;UBERON:0000115!2.33e-08!19;UBERON:0007625!3.02e-08!11;UBERON:0000064!5.34e-08!219;UBERON:0005153!5.90e-08!37;UBERON:0001737!7.03e-08!9;UBERON:0003124!8.81e-08!7;UBERON:0002048!1.97e-07!22;UBERON:0000117!1.97e-07!22;UBERON:0000171!1.97e-07!22;UBERON:0000170!1.97e-07!22;UBERON:0005597!1.97e-07!22;UBERON:0000118!1.97e-07!22;UBERON:0006554!1.99e-07!44;UBERON:0000464!3.22e-07!104;UBERON:0001008!4.24e-07!45;UBERON:0000062!5.13e-07!511;UBERON:0005157!7.21e-07!51;UBERON:0002100!9.38e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.68e-10;10!UBERON:0000158;2.68e-10;10!UBERON:0004211;7.67e-10;10!UBERON:0009773;7.67e-10;10!UBERON:0001231;7.67e-10;10!UBERON:0004810;7.67e-10;10!UBERON:0006853;1.49e-09;3!UBERON:0007685;1.49e-09;3!UBERON:0004134;1.49e-09;3!UBERON:0006555;1.20e-08;15!UBERON:0004819;1.20e-08;15!UBERON:0001285;1.20e-08;15!UBERON:0007684;1.20e-08;15!UBERON:0001225;3.42e-08;12!UBERON:0008987;3.42e-08;12!UBERON:0000478;3.91e-08;24!UBERON:0010077;7.13e-07;4!UBERON:0005389;7.13e-07;4!UBERON:0000484;7.13e-07;4!UBERON:0000965;7.13e-07;4!UBERON:0001803;7.13e-07;4!UBERON:0000305;8.69e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.50e-15,14;UBERON:0000158,2.50e-15,14;UBERON:0003124,1.56e-10,7;UBERON:0004810,4.94e-10,10;UBERON:0006853,1.28e-09,3;UBERON:0007685,1.28e-09,3;UBERON:0004134,1.28e-09,3;UBERON:0004211,8.46e-09,15;UBERON:0009773,8.46e-09,15;UBERON:0001231,8.46e-09,15;UBERON:0001285,8.46e-09,15;UBERON:0007684,8.46e-09,15;UBERON:0004208,8.46e-09,15;UBERON:0006554,1.27e-08,47;UBERON:0009569,1.38e-08,112;UBERON:0001008,2.24e-08,48;UBERON:0001225,2.27e-08,12;UBERON:0008987,2.27e-08,12;UBERON:0000478,3.35e-08,24;UBERON:0006555,3.52e-08,16;UBERON:0004819,3.52e-08,16;UBERON:0005177,5.05e-08,101;UBERON:0001041,5.65e-07,87;UBERON:0001987,6.20e-07,4;UBERON:0004340,6.20e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,9.33788958705734,6.97801167972428,4.15038607047327,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0.283604451492204,1.77383517970051,0.175669571386252,0.0654895377488563,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0.946454400318751,0.674338760312407,1.92808823906786,0.882351781859152,1.52515610864684,0.949082476444386,0.539325232640658,0.588664395376038,0.38474715694639,0.738155454624648,0,0.8231480226628,2.94017422771084,1.26755034821831,0,0.590789906681404,0,0.860919069801795,0.343135620597051,0.109750285408626,0,0,0.277765335475589,0,0,2.88662684050547,0.115930404975077,1.05667824812239,0,0,0,3.1608175918371,6.86788929675898,0,0,0,0,1.00789276919316,0.425325291727159,0.447792613514241,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0.904318131178758,0,1.59956785891291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,1.20303882181971,0.368323955743585,0,0,0,1.80479845162965,1.61732207919271,2.35304930753057,0,0.422206515571503,0,0,0.215915916102139,0,0.812839312631559,0,4.33289664176565,1.66215201785745,2.0148727924996,0,0,0.256450125116389,2.62411716559765,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.953150969619124,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0.845086807596724,0.430234056612155,1.47373561519682,0.7133421029625,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,2.58303223602738,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,1.1750647824022,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.852408440419239,1.19372242368845,1.18785872333055,0.614321404198464,0,0,0,0,0,0,0.552567831062295,0.251932747854276,0,0,0,0.988551862620595,1.07412704805365,0,0,0,0,0,0,0,3.9064164162785,0.262379999988587,0,0,1.27126825146383,1.65471377237555,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,1.1528195219403,1.97466817701499,1.84700532267414,6.06102203490647,0.549585560411174,5.33034776018635,0,0,0,0.225595660617181,0,1.00692952185506,0,0,0.843992258112108,2.28525931422807,3.25112064298064,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,2.34797542718508,0.242780379534093,0,1.20990716048664,0,0,0,0.311064574191741,0,0,0,0,0,0,6.59527005673497,0.195984794828755,0.435296032902013,0,0,0.774050650312681,0.292357268344742,0.574808199372465,0,0.529536760149002,0,0.137041924646751,0,0,1.36885967914362,0.64127056201227,0.640358984218058,4.79543062997113,0.288180834308212,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0.429226048136571,0,0.0671834724867263,0,2.32991899054908,0.630265458457789,0.412079291905832,0.539228350833479,1.47641222272123,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0.236417121897595,0.104909176269996,0.211200673038813,0.717149357331379,0.767660789277781,0,0,0.5085370753095,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0,0,1.53978154095896,1.40963004463334,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.310525913752519,0,0,0.521745061811734,0.601030435988874,2.66563648518157,2.03435366602331,0,0.537052785212442,0,0,0,0,0,0,0.192619830407303,0.857766365499703,0.521988583930423,1.81364740409818,8.56633154998186,0,0.537266523244462,8.33763907334625,4.16639694199544,0.530067437837643,3.8582807654183,0.844712203265363,0,2.76344273384959,2.73473960559644,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0.183428598521679,1.5018336599544,0,0,0,0,0,0,0.523813388962845,0.49131575253029,1.33070477595341,0,0,0,0,0,0.548257766857182,0,0,0.383287282918786,0,0,0,0,0.975726071789027,0,0.171488009437418,0,0,0.472775363535873,0.111231401892069,0,0,0.840816489941367,0,0.863710364874486,0,0,0,1.04617282831313,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,1.14553434272025,0.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| ||
|short_description=p1@KRT8P13 | |short_description=p1@KRT8P13 | ||
}} | }} |
Latest revision as of 16:35, 16 September 2015
Short description: | p1@KRT8P13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT8P13_5end |
Coexpression cluster: | C819_Alveolar_MCF7_mesothelioma_endometrioid_signet_Renal_gastric |
Association with transcript: | -261bp_to_ENST00000463294_5end |
EntrezGene: | NA |
HGNC: | 33365 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.07e-22 | 253 |
extraembryonic cell | 8.07e-11 | 19 |
kidney tubule cell | 4.94e-10 | 10 |
nephron tubule epithelial cell | 4.94e-10 | 10 |
brush border epithelial cell | 1.28e-09 | 3 |
kidney cortex tubule cell | 1.28e-09 | 3 |
epithelial cell of proximal tubule | 1.28e-09 | 3 |
placental epithelial cell | 4.02e-09 | 3 |
mesothelial cell | 4.70e-09 | 19 |
epithelial cell of nephron | 8.46e-09 | 15 |
endodermal cell | 1.31e-08 | 58 |
kidney cortical cell | 2.27e-08 | 12 |
renal cortical epithelial cell | 2.27e-08 | 12 |
kidney cell | 1.24e-07 | 17 |
kidney epithelial cell | 1.24e-07 | 17 |
amniotic epithelial cell | 2.91e-07 | 2 |
endo-epithelial cell | 4.00e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.50e-15 | 14 |
membranous layer | 2.50e-15 | 14 |
chorion | 1.56e-10 | 7 |
nephron tubule epithelium | 4.94e-10 | 10 |
renal cortex tubule | 1.28e-09 | 3 |
region of nephron tubule | 1.28e-09 | 3 |
proximal tubule | 1.28e-09 | 3 |
nephron epithelium | 8.46e-09 | 15 |
renal tubule | 8.46e-09 | 15 |
nephron tubule | 8.46e-09 | 15 |
nephron | 8.46e-09 | 15 |
uriniferous tubule | 8.46e-09 | 15 |
nephrogenic mesenchyme | 8.46e-09 | 15 |
urinary system structure | 1.27e-08 | 47 |
subdivision of trunk | 1.38e-08 | 112 |
renal system | 2.24e-08 | 48 |
cortex of kidney | 2.27e-08 | 12 |
renal parenchyma | 2.27e-08 | 12 |
extraembryonic structure | 3.35e-08 | 24 |
excretory tube | 3.52e-08 | 16 |
kidney epithelium | 3.52e-08 | 16 |
trunk region element | 5.05e-08 | 101 |
foregut | 5.65e-07 | 87 |
placenta | 6.20e-07 | 4 |
allantois | 6.20e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.18e-14 | 25 |
carcinoma | 1.95e-09 | 106 |
cell type cancer | 2.06e-08 | 143 |
thoracic cancer | 9.54e-08 | 4 |
breast cancer | 9.54e-08 | 4 |
cancer | 2.35e-07 | 235 |
signet ring cell adenocarcinoma | 3.19e-07 | 2 |
disease of cellular proliferation | 4.96e-07 | 239 |