FFCP PHASE1:Hg19::chrX:69643154..69643183,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54857 | |EntrezGene=54857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25974 | |HGNC=25974 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCC8 | |UniProt=Q9HCC8 | ||
|association_with_transcript=163bp_to_ENST00000374382,uc004dyh.2,uc010nkx.1,uc010nky.1,uc011mpk.1,uc011mpl.1,uc011mpm.1_5end | |association_with_transcript=163bp_to_ENST00000374382,uc004dyh.2,uc010nkx.1,uc010nky.1,uc011mpk.1,uc011mpl.1,uc011mpm.1_5end | ||
|cluster_id=chrX:69643154..69643183,+ | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_1_at_GDPD2_5end | |description=CAGE_peak_1_at_GDPD2_5end | ||
|id=chrX:69643154..69643183,+ | |id=chrX:69643154..69643183,+ | ||
|ontology_enrichment_celltype=CL:0000047!3.29e-09!8;CL:0002076!4.36e-07!43;CL:0000540!4.37e-07!6;CL:0000031!4.37e-07!6;CL:0000404!4.37e-07!6 | |ontology_enrichment_celltype=CL:0000047!3.29e-09!8;CL:0002076!4.36e-07!43;CL:0000540!4.37e-07!6;CL:0000031!4.37e-07!6;CL:0000404!4.37e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.31e-09;6!CL:0000404;1.31e-09;6!CL:0002322;3.37e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-12,8;CL:0000540,1.64e-09,6;CL:0000031,1.64e-09,6;CL:0000404,1.64e-09,6;CL:0002322,2.60e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.31e-09;6!UBERON:0006601;5.35e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.20e-49!82;UBERON:0001049!1.53e-47!57;UBERON:0005068!1.53e-47!57;UBERON:0006241!1.53e-47!57;UBERON:0007135!1.53e-47!57;UBERON:0005743!3.08e-47!86;UBERON:0002616!7.63e-41!59;UBERON:0002780!1.27e-40!41;UBERON:0001890!1.27e-40!41;UBERON:0006240!1.27e-40!41;UBERON:0000073!1.78e-40!94;UBERON:0001016!1.78e-40!94;UBERON:0003080!2.70e-39!42;UBERON:0000955!2.09e-37!69;UBERON:0006238!2.09e-37!69;UBERON:0003075!1.23e-36!86;UBERON:0007284!1.23e-36!86;UBERON:0004121!3.80e-35!169;UBERON:0002020!9.43e-35!34;UBERON:0003528!9.43e-35!34;UBERON:0001893!1.62e-34!34;UBERON:0002346!5.05e-34!90;UBERON:0002791!9.82e-34!33;UBERON:0000924!1.25e-33!173;UBERON:0006601!1.25e-33!173;UBERON:0000153!1.36e-33!129;UBERON:0007811!1.36e-33!129;UBERON:0000033!1.98e-33!123;UBERON:0007023!1.34e-32!115;UBERON:0001869!1.62e-32!32;UBERON:0003056!2.69e-31!61;UBERON:0000956!1.07e-25!25;UBERON:0000203!1.07e-25!25;UBERON:0002619!8.87e-23!22;UBERON:0001950!1.47e-20!20;UBERON:0000064!1.04e-17!219;UBERON:0000062!3.01e-13!511;UBERON:0000922!2.49e-12!612;UBERON:0000468!3.79e-11!659;UBERON:0002308!2.05e-10!9;UBERON:0000125!2.05e-10!9;UBERON:0002420!2.54e-10!9;UBERON:0007245!2.54e-10!9;UBERON:0010009!2.54e-10!9;UBERON:0010011!2.54e-10!9;UBERON:0000454!2.54e-10!9;UBERON:0000467!3.78e-10!625;UBERON:0000480!4.63e-10!626;UBERON:0000481!1.48e-09!347;UBERON:0003076!1.60e-09!15;UBERON:0003057!1.60e-09!15;UBERON:0002050!2.27e-09!605;UBERON:0005423!2.27e-09!605;UBERON:0001871!2.34e-09!7;UBERON:0000475!2.64e-09!365;UBERON:0000923!4.80e-09!604;UBERON:0005291!4.80e-09!604;UBERON:0006598!4.80e-09!604;UBERON:0002532!4.80e-09!604;UBERON:0009663!2.84e-08!7;UBERON:0004111!5.26e-08!241;UBERON:0003135!1.88e-07!11;UBERON:0001894!1.97e-07!7;UBERON:0006222!1.97e-07!7;UBERON:0002298!2.00e-07!8;UBERON:0004733!4.78e-07!12;UBERON:0002028!4.78e-07!12;UBERON:0007277!4.78e-07!12;UBERON:0000349!6.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.24e-42;34!UBERON:0002020;3.24e-42;34!UBERON:0002791;7.33e-42;32!UBERON:0001893;8.36e-42;34!UBERON:0001869;9.04e-42;32!UBERON:0002780;4.60e-40;41!UBERON:0001890;4.60e-40;41!UBERON:0000956;3.47e-36;25!UBERON:0000203;3.47e-36;25!UBERON:0000073;3.89e-34;53!UBERON:0002616;3.89e-34;53!UBERON:0002619;5.74e-32;22!UBERON:0001950;9.78e-29;20!UBERON:0000955;9.72e-20;68!UBERON:0001017;6.47e-19;75!UBERON:0001016;8.23e-16;83!UBERON:0000125;4.05e-14;9!UBERON:0002308;4.05e-14;9!UBERON:0002420;6.39e-14;9!UBERON:0007245;6.39e-14;9!UBERON:0010009;6.39e-14;9!UBERON:0010011;6.39e-14;9!UBERON:0000454;6.39e-14;9!UBERON:0000160;7.60e-12;17!UBERON:0001871;2.06e-11;6!UBERON:0009663;4.54e-11;7!UBERON:0002298;7.15e-11;6!UBERON:0003135;1.45e-10;11!UBERON:0005409;3.48e-10;22!UBERON:0007023;2.92e-09;114!UBERON:0011216;3.37e-09;132!UBERON:0000349;4.15e-09;5!UBERON:0000200;6.38e-09;6!UBERON:0000922;3.07e-08;49!UBERON:0001872;6.32e-08;5!UBERON:0001894;6.91e-08;7!UBERON:0004921;1.27e-07;33!UBERON:0002021;1.40e-07;5!UBERON:0000369;2.53e-07;4!UBERON:0002435;2.53e-07;4!UBERON:0000204;2.53e-07;4!UBERON:0004733;9.91e-07;12!UBERON:0002028;9.91e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.39e-61,56;UBERON:0005068,7.39e-61,56;UBERON:0006241,7.39e-61,56;UBERON:0007135,7.39e-61,56;UBERON:0000073,3.36e-59,53;UBERON:0002616,3.36e-59,53;UBERON:0001017,4.61e-59,81;UBERON:0002780,1.88e-55,41;UBERON:0001890,1.88e-55,41;UBERON:0003080,1.88e-55,41;UBERON:0006240,1.88e-55,41;UBERON:0001016,2.09e-51,89;UBERON:0003528,2.13e-49,34;UBERON:0002020,2.13e-49,34;UBERON:0001893,4.68e-49,34;UBERON:0002791,3.37e-46,32;UBERON:0001869,3.60e-46,32;UBERON:0000955,3.85e-46,68;UBERON:0006238,3.85e-46,68;UBERON:0003075,5.51e-43,82;UBERON:0007284,5.51e-43,82;UBERON:0002346,3.10e-40,86;UBERON:0003056,4.20e-40,61;UBERON:0010371,4.15e-38,104;UBERON:0000956,2.56e-36,25;UBERON:0000203,2.56e-36,25;UBERON:0004121,1.61e-32,171;UBERON:0000924,1.61e-32,171;UBERON:0006601,1.61e-32,171;UBERON:0002619,4.17e-32,22;UBERON:0011216,1.27e-30,223;UBERON:0001950,6.62e-29,20;UBERON:0007023,1.75e-28,114;UBERON:0010314,6.06e-23,132;UBERON:0000125,2.73e-14,9;UBERON:0002308,2.73e-14,9;UBERON:0002420,3.73e-14,9;UBERON:0007245,3.73e-14,9;UBERON:0010009,3.73e-14,9;UBERON:0010011,3.73e-14,9;UBERON:0000454,3.73e-14,9;UBERON:0005409,3.58e-12,25;UBERON:0000160,7.21e-12,17;UBERON:0000922,8.78e-12,592;UBERON:0001871,1.99e-11,6;UBERON:0009663,3.25e-11,7;UBERON:0002298,8.39e-11,6;UBERON:0000923,1.84e-10,560;UBERON:0010316,1.84e-10,560;UBERON:0005291,1.84e-10,560;UBERON:0006598,1.84e-10,560;UBERON:0010317,1.84e-10,560;UBERON:0002532,1.84e-10,560;UBERON:0003135,1.99e-10,11;UBERON:0002050,3.39e-10,564;UBERON:0000025,3.60e-10,192;UBERON:0000349,3.12e-09,5;UBERON:0005423,4.15e-09,581;UBERON:0004111,5.18e-09,240;UBERON:0000200,7.82e-09,6;UBERON:0003076,2.46e-08,15;UBERON:0003057,2.46e-08,15;UBERON:0001872,5.25e-08,5;UBERON:0001894,7.31e-08,7;UBERON:0006222,7.31e-08,7;UBERON:0002021,1.47e-07,5;UBERON:0000369,1.95e-07,4;UBERON:0002435,1.95e-07,4;UBERON:0000204,1.95e-07,4;UBERON:0010082,1.95e-07,4;UBERON:0000483,4.53e-07,306;UBERON:0000119,7.39e-07,309;UBERON:0000059,9.74e-07,11 | |||
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| ||
|short_description=p1@GDPD2 | |short_description=p1@GDPD2 | ||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p1@GDPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GDPD2_5end |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | 163bp_to_ENST00000374382, uc004dyh.2, uc010nkx.1, uc010nky.1, uc011mpk.1, uc011mpl.1, uc011mpm.1_5end |
EntrezGene: | GDPD2 |
HGNC: | 25974 |
UniProt: | Q9HCC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-12 | 8 |
neuron | 1.64e-09 | 6 |
neuroblast | 1.64e-09 | 6 |
electrically signaling cell | 1.64e-09 | 6 |
embryonic stem cell | 2.60e-08 | 5 |