FFCP PHASE1:Hg19::chr8:127570676..127570690,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:127570676..127570690,- to FFCP PHASE1:Hg19::chr8:127570676..127570690,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=157638 | |EntrezGene=157638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24166 | |HGNC=24166 | ||
|TSSclassifier=strong | |||
|UniProt=Q96KN1 | |UniProt=Q96KN1 | ||
|association_with_transcript=20bp_to_NM_174911_5end | |||
|cluster_id=chr8:127570676..127570690,- | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_4_at_FAM84B_5end | |||
|id=chr8:127570676..127570690,- | |||
|ontology_enrichment_celltype=CL:0000066!7.30e-25!254;CL:1000497!8.25e-07!18;CL:0002518!8.25e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.23e-10;15!CL:0002681;5.54e-09;12!CL:0002584;5.54e-09;12!CL:1000497;8.31e-09;17!CL:0002518;8.31e-09;17!CL:0000540;1.50e-07;6!CL:0000404;1.50e-07;6!CL:0000349;4.05e-07;19!CL:1000507;7.61e-07;10!CL:1000494;7.61e-07;10!CL:0002319;7.67e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.71e-15,253;CL:1000449,1.82e-10,15;CL:0000047,2.78e-10,8;CL:0002681,4.63e-09,12;CL:0002584,4.63e-09,12;CL:1000497,6.97e-09,17;CL:0002518,6.97e-09,17;CL:0000540,8.35e-08,6;CL:0000031,8.35e-08,6;CL:0000404,8.35e-08,6;CL:0000349,3.94e-07,19;CL:0002319,6.07e-07,25;CL:1000507,7.26e-07,10;CL:1000494,7.26e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.50e-07;6 | |||
|ontology_enrichment_disease=DOID:305!4.82e-17!106;DOID:0050687!6.17e-15!143;DOID:299!3.85e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;5.60e-10;25!DOID:3095;3.07e-07;22!DOID:2994;3.07e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:299,4.48e-10,25;DOID:0050687,1.26e-07,143;DOID:305,2.19e-07,106;DOID:3095,3.21e-07,22;DOID:2994,3.21e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000064!5.71e-09!219;UBERON:0000924!1.94e-08!173;UBERON:0006601!1.94e-08!173;UBERON:0000464!1.18e-07!104;UBERON:0000489!1.34e-07!32;UBERON:0002113!2.04e-07!27;UBERON:0003918!2.04e-07!27;UBERON:0005095!2.04e-07!27;UBERON:0007687!2.04e-07!27;UBERON:0007625!2.18e-07!11;UBERON:0004121!3.35e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.27e-13;11!UBERON:0002113;5.95e-11;24!UBERON:0011143;5.95e-11;24!UBERON:0006555;2.23e-10;15!UBERON:0004819;2.23e-10;15!UBERON:0001285;2.23e-10;15!UBERON:0007684;2.23e-10;15!UBERON:0002104;1.13e-09;21!UBERON:0001225;5.54e-09;12!UBERON:0008987;5.54e-09;12!UBERON:0000970;6.63e-09;20!UBERON:0001456;2.13e-08;21!UBERON:0000353;2.32e-08;15!UBERON:0000489;2.52e-08;29!UBERON:0001851;3.54e-08;15!UBERON:0001032;5.17e-08;24!UBERON:0004456;5.17e-08;24!UBERON:0000019;5.49e-08;19!UBERON:0000047;5.49e-08;19!UBERON:0004088;5.49e-08;19!UBERON:0010230;5.49e-08;19!UBERON:0006554;6.54e-08;30!UBERON:0001008;6.54e-08;30!UBERON:0002050;1.07e-07;5!UBERON:0005423;1.07e-07;5!UBERON:0000020;2.55e-07;23!UBERON:0000488;3.40e-07;4!UBERON:0004211;7.61e-07;10!UBERON:0009773;7.61e-07;10!UBERON:0001231;7.61e-07;10!UBERON:0004810;7.61e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.71e-13,11;UBERON:0004211,1.82e-10,15;UBERON:0009773,1.82e-10,15;UBERON:0001231,1.82e-10,15;UBERON:0001285,1.82e-10,15;UBERON:0007684,1.82e-10,15;UBERON:0004208,1.82e-10,15;UBERON:0002113,9.13e-10,26;UBERON:0003918,9.13e-10,26;UBERON:0011143,9.13e-10,26;UBERON:0005095,9.13e-10,26;UBERON:0007687,9.13e-10,26;UBERON:0006555,1.27e-09,16;UBERON:0004819,1.27e-09,16;UBERON:0000970,1.34e-09,21;UBERON:0002104,1.34e-09,21;UBERON:0001456,4.15e-09,22;UBERON:0001225,4.63e-09,12;UBERON:0008987,4.63e-09,12;UBERON:0000019,1.02e-08,20;UBERON:0000047,1.02e-08,20;UBERON:0010312,1.02e-08,20;UBERON:0004088,1.02e-08,20;UBERON:0010230,1.02e-08,20;UBERON:0003072,1.02e-08,20;UBERON:0004128,1.02e-08,20;UBERON:0003071,1.02e-08,20;UBERON:0005631,1.47e-08,14;UBERON:0000158,1.47e-08,14;UBERON:0006554,1.56e-08,47;UBERON:0000353,1.78e-08,15;UBERON:0001851,2.38e-08,15;UBERON:0001008,3.10e-08,48;UBERON:0000020,5.95e-08,24;UBERON:0001032,5.95e-08,24;UBERON:0004456,5.95e-08,24;UBERON:0000489,1.61e-07,31;UBERON:0003124,1.92e-07,7;UBERON:0004121,2.35e-07,171;UBERON:0000924,2.35e-07,171;UBERON:0006601,2.35e-07,171;UBERON:0000488,3.09e-07,4;UBERON:0001781,5.04e-07,4;UBERON:0004810,7.26e-07,10 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0,1.09220686065086,0.791300934685361,0,0,0,0,0,0,0.369363174230364,0,0,3.72106783270374,0.821246550437305,7.65810101528297,0,0,0,0,0,0.464448369948228,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0.651844533267181,0.946895611469467,0,0.111410456885174,0.589211814949674,0.221533894583621,0.270803863765016,0,0.130059347559878,0.657751618414705,0.829050053357545,0,0.593146252648242,0,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0,0,0,0.602300476311091,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0,0,0,0.255725123687061,0,0,0,0,0,5.19941494402373,8.42571710357743,12.2968699970376,0.785874452986276,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0.775250277507987,2.13459757612026,2.34304428935269,0,0,0.24406205754817,0.367663080345869,1.62028389576352,0.17859945656816,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,1.93260853163297,0.545492241181669,2.86804595389004,1.70763188581434,1.59035721985782,2.20768491452085,1.45125477021519,0.756962552626885,0.36497735907583,0,0,0,0,0,0.473227200159376,0,0.482022059766964,0.110293972732394,0.435758888184812,0.237270619111097,0,0,0.769494313892781,2.95262181849859,0,0,0,0,0,0,0,0.122988438543114,3.94605963686609,0.98775256867763,0,1.60846355858609,0,0,0,4.3299402607582,1.04337364477569,5.51820862908362,0.288732895522148,0,0,1.58040879591855,2.57545848628462,0.246217006087397,0,0,0,0.335964256397719,0,0.179117045405697,0.871901815541886,0.383382679165211,0,0,0.414656231081544,0.864719720501769,0.50496973370552,0,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.07333828582095,7.49775951395111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,43.1058309195208,6.97226766880235,16.5955165362215,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.256686072559497,2.7950408664471,3.90419561572865,2.31986643833309,1.67516265334349,2.55175500661265,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0.315404830067869,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,1.81876542867756,16.6435439510497,3.0239029332968,0,0.460385919864187,0,0,2.04682899626681,0.160853921143607,0,0,0,0,0,0,0.120859449591622,3.20810352485256,1.01289087829486,0,0,0,2.70719767744447,3.61972084390749,0.784349769176855,7.30696123266303,2.53323909342902,10.2360045663807,1.87103075804167,2.15915916102139,13.880452742126,0.812839312631559,0,6.11703055308092,4.98645605357235,2.23874754722178,0,0,42.3142706442042,48.2181529178567,18.8719468905296,1.03041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0.495854746082934,0.384380134730212,0.382838137483752,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0.6196469961995,0,0.143411352204052,1.08073945114433,0.35667105148125,0,0,0,0,0,0.384888450902048,0,0,0.941438007767792,0.86101074534246,0,0,0,0,0,0,0.714695326373367,0,0.648473311192717,0.540031437238115,0,20.7238697987298,0,0.490080431962063,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,1.8714054040822,0.293016358543788,0,0,0,4.29740072527842,1.48482340416319,3.68592842519078,0,0.422008249231538,0.445234820091624,0,0.211125408127993,0.398495976502139,0,0.503865495708552,1.32949287252801,0,0,0.898683511473268,0.716084698702437,0,0.197286811273867,0,0,0,0.0927680981618513,1.99613798001194,2.08342208868187,1.22443999994674,0.724999575434793,0.455173793141999,10.6786533122962,1.41832609060762,0.344743373241465,7.29011533458136,0.173624994933292,0,0.241192877250816,0,0.663475559587348,0,0.658156191461918,0,1.11538995422883,0.923403102045565,0.113942055847001,0,0.179515288819544,0.434589487688032,5.42301971544263,1.64875668123352,4.26427820814908,0,0,0,0,0,0,0,0,2.3209787098083,6.8557779426842,0,55.1791031342332,0,0.442287822516696,0.611030144933625,0,0,0,1.01101699471016,0,0.468528891450678,0,7.23959090048732,0,1.18375320854817,1.20990716048664,0,0,0.450970258243478,2.07376382794494,1.99396161812156,6.95083107338548,1.88359751044335,7.16834578637753,1.99226682220855,0,0.694238953340524,1.37189356380129,2.43765778425127,0.52418000472609,0,0.0967563312890851,0.146178634172371,0.0821154570532092,1.16386819786103,0.882561266915003,2.03382666702479,0,0,0,0.977756913674015,0.561111741760736,0.213452994739353,1.79828648623917,0.432271251462318,0,0,3.60136994970374,0,0.235694034616795,3.80531777006119,2.40586546518366,0,0,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| ||
|short_description=p4@FAM84B | |||
}} | }} |
Latest revision as of 04:29, 16 September 2015
Short description: | p4@FAM84B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM84B_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 20bp_to_NM_174911_5end |
EntrezGene: | FAM84B |
HGNC: | 24166 |
UniProt: | Q96KN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.71e-15 | 253 |
epithelial cell of nephron | 1.82e-10 | 15 |
neuronal stem cell | 2.78e-10 | 8 |
kidney cortical cell | 4.63e-09 | 12 |
renal cortical epithelial cell | 4.63e-09 | 12 |
kidney cell | 6.97e-09 | 17 |
kidney epithelial cell | 6.97e-09 | 17 |
neuron | 8.35e-08 | 6 |
neuroblast | 8.35e-08 | 6 |
electrically signaling cell | 8.35e-08 | 6 |
extraembryonic cell | 3.94e-07 | 19 |
neural cell | 6.07e-07 | 25 |
kidney tubule cell | 7.26e-07 | 10 |
nephron tubule epithelial cell | 7.26e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.48e-10 | 25 |
cell type cancer | 1.26e-07 | 143 |
carcinoma | 2.19e-07 | 106 |
germ cell and embryonal cancer | 3.21e-07 | 22 |
germ cell cancer | 3.21e-07 | 22 |