FFCP PHASE1:Hg19::chr9:93195787..93195800,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:93195787..93195800,-
|short_description=p2@ENST00000436671
|description=CAGE_peak_2_at_ENST00000436671_5end
|association_with_transcript=0bp_to_ENST0000043...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000436671_5end | |||
|cluster_id=chr9:93195787..93195800,- | |||
|description=CAGE_peak_2_at_ENST00000436671_5end | |||
|id=chr9:93195787..93195800,- | |||
|ontology_enrichment_celltype=CL:1000497!1.08e-12!18;CL:0002518!1.08e-12!18;CL:1000507!1.67e-11!12;CL:1000494!1.67e-11!12;CL:0000066!5.50e-10!254;CL:1000449!6.83e-10!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.27e-35;10!CL:1000494;3.27e-35;10!CL:1000497;2.68e-30;17!CL:0002518;2.68e-30;17!CL:1000449;6.05e-23;15!CL:0000064;6.10e-15;3!CL:0000067;6.10e-15;3!CL:0005012;6.10e-15;3!CL:0002304;6.10e-15;3!CL:0002681;7.44e-13;12!CL:0002584;7.44e-13;12!CL:0000650;8.90e-10;2!CL:1000500;8.90e-10;2!CL:1000618;8.90e-10;2!CL:1001318;8.90e-10;2!CL:0002173;8.90e-10;2!CL:0000075;1.60e-07;27!CL:0002149;1.75e-07;6!CL:0002255;1.75e-07;6!CL:0000239;4.57e-07;3!CL:1000615;4.57e-07;3!CL:0002306;4.57e-07;3!CL:0000322;5.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.63e-35,10;CL:1000494,2.63e-35,10;CL:1000497,2.10e-30,17;CL:0002518,2.10e-30,17;CL:1000449,5.24e-23,15;CL:0000066,3.87e-18,253;CL:0000064,6.25e-15,3;CL:0000067,6.25e-15,3;CL:0005012,6.25e-15,3;CL:0002304,6.25e-15,3;CL:0002681,6.41e-13,12;CL:0002584,6.41e-13,12;CL:0000650,7.28e-10,2;CL:1000500,7.28e-10,2;CL:1000618,7.28e-10,2;CL:1001318,7.28e-10,2;CL:0002173,7.28e-10,2;CL:0002149,1.68e-07,6;CL:0002255,1.68e-07,6;CL:0000075,1.77e-07,27;CL:0000239,5.00e-07,3;CL:1000615,5.00e-07,3;CL:0000322,5.00e-07,3;CL:0002306,5.00e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.18e-13!106;DOID:0050687!8.20e-12!143;DOID:299!1.13e-10!25;DOID:7!9.04e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;2.19e-10;25!DOID:3910;4.52e-10;2!DOID:3908;7.98e-09;5!DOID:3001;1.75e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.49e-11,106;DOID:299,2.16e-10,25;DOID:3910,3.86e-10,2;DOID:0050687,3.60e-09,143;DOID:3908,6.89e-09,5;DOID:3001,1.68e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002113!7.43e-17!27;UBERON:0003918!7.43e-17!27;UBERON:0005095!7.43e-17!27;UBERON:0007687!7.43e-17!27;UBERON:0000058!1.14e-15!26;UBERON:0000489!7.28e-15!32;UBERON:0000080!4.09e-12!18;UBERON:0002120!4.09e-12!18;UBERON:0004875!4.09e-12!18;UBERON:0005721!4.09e-12!18;UBERON:0005754!4.09e-12!18;UBERON:0007297!4.09e-12!18;UBERON:0009773!1.67e-11!12;UBERON:0001231!1.67e-11!12;UBERON:0004810!1.67e-11!12;UBERON:0006555!5.49e-11!17;UBERON:0005103!5.49e-11!17;UBERON:0000083!5.49e-11!17;UBERON:0009201!5.49e-11!17;UBERON:0004819!5.49e-11!17;UBERON:0006553!5.49e-11!17;UBERON:0003074!5.49e-11!17;UBERON:0003060!5.49e-11!17;UBERON:0009569!9.80e-11!113;UBERON:0004876!1.44e-10!20;UBERON:0005177!2.44e-10!107;UBERON:0000464!2.57e-10!104;UBERON:0000466!2.86e-10!126;UBERON:0003887!6.59e-10!21;UBERON:0004211!6.83e-10!16;UBERON:0001285!6.83e-10!16;UBERON:0007684!6.83e-10!16;UBERON:0003220!6.83e-10!16;UBERON:0004208!6.83e-10!16;UBERON:0002417!1.56e-09!61;UBERON:0000916!1.56e-09!61;UBERON:0005172!2.23e-09!55;UBERON:0005173!2.23e-09!55;UBERON:0006554!2.64e-09!44;UBERON:0001008!5.56e-09!45;UBERON:0000488!3.42e-08!4;UBERON:0000064!3.75e-08!219;UBERON:0002553!5.84e-08!70;UBERON:0000475!7.42e-08!365;UBERON:0003886!7.90e-08!63;UBERON:0000481!6.68e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.27e-35;10!UBERON:0009773;3.27e-35;10!UBERON:0001231;3.27e-35;10!UBERON:0004810;3.27e-35;10!UBERON:0002113;1.04e-24;24!UBERON:0011143;1.04e-24;24!UBERON:0006555;6.05e-23;15!UBERON:0004819;6.05e-23;15!UBERON:0001285;6.05e-23;15!UBERON:0007684;6.05e-23;15!UBERON:0000489;5.23e-20;29!UBERON:0006554;2.95e-19;30!UBERON:0001008;2.95e-19;30!UBERON:0000488;7.96e-19;4!UBERON:0001778;6.10e-15;3!UBERON:0001775;6.10e-15;3!UBERON:0007625;1.39e-14;11!UBERON:0001225;7.44e-13;12!UBERON:0008987;7.44e-13;12!UBERON:0002203;1.37e-12;6!UBERON:0001768;1.37e-12;6!UBERON:0002200;1.37e-12;6!UBERON:0001801;2.53e-11;14!UBERON:0005172;2.28e-10;52!UBERON:0005173;2.28e-10;52!UBERON:0001851;3.66e-10;15!UBERON:0000353;3.66e-10;15!UBERON:0004903;4.52e-10;2!UBERON:0002173;4.52e-10;2!UBERON:0002186;4.52e-10;2!UBERON:0003567;8.90e-10;2!UBERON:0003838;8.90e-10;2!UBERON:0003586;8.90e-10;2!UBERON:0005169;8.90e-10;2!UBERON:0002321;8.90e-10;2!UBERON:0005215;8.90e-10;2!UBERON:0002303;8.90e-10;2!UBERON:0002319;8.90e-10;2!UBERON:0002104;9.59e-10;21!UBERON:0001032;2.09e-08;24!UBERON:0004456;2.09e-08;24!UBERON:0000019;3.57e-08;19!UBERON:0000047;3.57e-08;19!UBERON:0004088;3.57e-08;19!UBERON:0010230;3.57e-08;19!UBERON:0000970;9.85e-08;20!UBERON:0001456;2.47e-07;21!UBERON:0006853;4.57e-07;3!UBERON:0007685;4.57e-07;3!UBERON:0004134;4.57e-07;3!UBERON:0005177;4.84e-07;99!UBERON:0002417;5.06e-07;58!UBERON:0000916;5.06e-07;58!UBERON:0004821;5.56e-07;3!UBERON:0007499;5.56e-07;3!UBERON:0003215;5.56e-07;3!UBERON:0010368;5.56e-07;3!UBERON:0009911;5.56e-07;3!UBERON:0002299;5.56e-07;3!UBERON:0006524;5.56e-07;3!UBERON:0008874;5.56e-07;3!UBERON:0002169;5.56e-07;3!UBERON:0004894;5.56e-07;3!UBERON:0006876;6.91e-07;11 | |||
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| ||
|short_description=p2@ENST00000436671 | |||
}} | }} |
Latest revision as of 03:25, 1 August 2015
Short description: | p2@ENST00000436671 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000436671_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000436671_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.63e-35 | 10 |
nephron tubule epithelial cell | 2.63e-35 | 10 |
kidney cell | 2.10e-30 | 17 |
kidney epithelial cell | 2.10e-30 | 17 |
epithelial cell of nephron | 5.24e-23 | 15 |
epithelial cell | 3.87e-18 | 253 |
ciliated cell | 6.25e-15 | 3 |
ciliated epithelial cell | 6.25e-15 | 3 |
multi-ciliated epithelial cell | 6.25e-15 | 3 |
non-pigmented ciliary epithelial cell | 6.25e-15 | 3 |
kidney cortical cell | 6.41e-13 | 12 |
renal cortical epithelial cell | 6.41e-13 | 12 |
mesangial cell | 7.28e-10 | 2 |
kidney interstitial cell | 7.28e-10 | 2 |
juxtaglomerular complex cell | 7.28e-10 | 2 |
renal interstitial pericyte | 7.28e-10 | 2 |
extraglomerular mesangial cell | 7.28e-10 | 2 |
epithelial cell of uterus | 1.68e-07 | 6 |
stromal cell of endometrium | 1.68e-07 | 6 |
columnar/cuboidal epithelial cell | 1.77e-07 | 27 |
brush border epithelial cell | 5.00e-07 | 3 |
kidney cortex tubule cell | 5.00e-07 | 3 |
pneumocyte | 5.00e-07 | 3 |
epithelial cell of proximal tubule | 5.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.49e-11 | 106 |
adenocarcinoma | 2.16e-10 | 25 |