FFCP PHASE1:Hg19::chr22:50732337..50732349,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:50732337..50732349,- | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_at_chr22:50732337..50732349,- | |description=CAGE_peak_at_chr22:50732337..50732349,- | ||
|id=chr22:50732337..50732349,- | |id=chr22:50732337..50732349,- | ||
|ontology_enrichment_celltype=CL:0000066!1.82e-12!254;CL:0002586!9.47e-10!3;CL:0000223!3.82e-08!59;CL:0000149!2.18e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.82e-12!254;CL:0002586!9.47e-10!3;CL:0000223!3.82e-08!59;CL:0000149!2.18e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002188;1.09e-11;5!CL:1000746;1.32e-08;7!CL:1000612;1.32e-08;7!CL:0002535;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,9.77e-12,5;CL:1000746,1.22e-08,7;CL:1000612,1.22e-08,7;CL:0002535,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.72e-15;1 | |||
|ontology_enrichment_disease=DOID:305!5.10e-20!106;DOID:0050687!1.36e-12!143;DOID:299!5.64e-08!25;DOID:3493!3.71e-07!2;DOID:4929!6.82e-07!2 | |ontology_enrichment_disease=DOID:305!5.10e-20!106;DOID:0050687!1.36e-12!143;DOID:299!5.64e-08!25;DOID:3493!3.71e-07!2;DOID:4929!6.82e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;3.95e-08;2!DOID:4468;6.35e-08;2!DOID:4929;6.35e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.82e-08,2;DOID:4468,7.03e-08,2;DOID:4929,8.60e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002294;8.78e-18;7!UBERON:0001173;8.78e-18;7!UBERON:0004913;1.50e-14;1!UBERON:0003703;1.50e-14;1!UBERON:0001174;1.50e-14;1!UBERON:0004914;1.50e-14;1!UBERON:0002394;3.60e-14;4!UBERON:0003928;3.60e-14;4!UBERON:0005409;1.85e-09;22!UBERON:0000074;1.32e-08;7!UBERON:0001229;1.32e-08;7!UBERON:0006955;6.35e-08;2!UBERON:0004801;6.35e-08;2!UBERON:0000160;3.50e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.75e-14,1;UBERON:0003703,2.75e-14,1;UBERON:0001174,2.75e-14,1;UBERON:0004914,2.75e-14,1;UBERON:0002294,8.03e-14,9;UBERON:0001173,8.03e-14,9;UBERON:0004912,8.03e-14,9;UBERON:0000058,2.07e-11,19;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0010532,1.22e-08,7;UBERON:0000074,1.22e-08,7;UBERON:0001229,1.22e-08,7;UBERON:0001230,1.22e-08,7;UBERON:0003220,1.22e-08,7;UBERON:0005749,1.22e-08,7;UBERON:0004199,1.22e-08,7;UBERON:0004209,1.22e-08,7;UBERON:0004198,1.22e-08,7;UBERON:0005409,2.03e-08,25;UBERON:0006955,9.19e-08,2;UBERON:0004801,9.19e-08,2;UBERON:0005103,1.15e-07,8;UBERON:0000083,1.15e-07,8;UBERON:0009201,1.15e-07,8;UBERON:0006553,1.15e-07,8;UBERON:0003074,1.15e-07,8;UBERON:0003060,1.15e-07,8;UBERON:0000160,3.39e-07,17;UBERON:0000080,6.60e-07,9;UBERON:0002120,6.60e-07,9;UBERON:0004875,6.60e-07,9;UBERON:0005721,6.60e-07,9;UBERON:0005754,6.60e-07,9;UBERON:0007297,6.60e-07,9 | |||
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| ||
|short_description=p@chr22:50732337..50732349,- | |short_description=p@chr22:50732337..50732349,- | ||
}} | }} |
Latest revision as of 22:27, 28 July 2015
Short description: | p@chr22:50732337..50732349, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:50732337..50732349, - |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 9.77e-12 | 5 |
glomerular cell | 1.22e-08 | 7 |
kidney corpuscule cell | 1.22e-08 | 7 |
epithelial cell of cervix | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.75e-14 | 1 |
extrahepatic bile duct | 2.75e-14 | 1 |
common bile duct | 2.75e-14 | 1 |
duodenal papilla | 2.75e-14 | 1 |
biliary system | 8.03e-14 | 9 |
biliary tree | 8.03e-14 | 9 |
biliary bud | 8.03e-14 | 9 |
duct | 2.07e-11 | 19 |
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
primitive nephron | 1.22e-08 | 7 |
renal glomerulus | 1.22e-08 | 7 |
renal corpuscle | 1.22e-08 | 7 |
glomerular capsule | 1.22e-08 | 7 |
metanephric mesenchyme | 1.22e-08 | 7 |
glomerular tuft | 1.22e-08 | 7 |
S-shaped body | 1.22e-08 | 7 |
renal vesicle | 1.22e-08 | 7 |
comma-shaped body | 1.22e-08 | 7 |
gastrointestinal system | 2.03e-08 | 25 |
uterine epithelium | 9.19e-08 | 2 |
cervix epithelium | 9.19e-08 | 2 |
mesonephric epithelium | 1.15e-07 | 8 |
mesonephric tubule | 1.15e-07 | 8 |
nephric duct | 1.15e-07 | 8 |
renal duct | 1.15e-07 | 8 |
mesonephric duct | 1.15e-07 | 8 |
pronephric duct | 1.15e-07 | 8 |
intestine | 3.39e-07 | 17 |
mesonephros | 6.60e-07 | 9 |
pronephros | 6.60e-07 | 9 |
nephrogenic cord | 6.60e-07 | 9 |
pronephric mesoderm | 6.60e-07 | 9 |
rostral part of nephrogenic cord | 6.60e-07 | 9 |
presumptive pronephric mesoderm | 6.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.82e-08 | 2 |
clear cell adenocarcinoma | 7.03e-08 | 2 |
tubular adenocarcinoma | 8.60e-08 | 2 |