FFCP PHASE1:Hg19::chr17:27052892..27052921,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27052892..27052921,+ | |||
|description=CAGE_peak_at_chr17:27052892..27052921,+ | |description=CAGE_peak_at_chr17:27052892..27052921,+ | ||
|id=chr17:27052892..27052921,+ | |id=chr17:27052892..27052921,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.87e-23!254;CL:0000548!2.51e-10!679;CL:0000004!2.51e-10!679;CL:0000255!2.51e-10!679;CL:0000012!7.25e-10!682;CL:0002321!1.74e-07!248;CL:0000220!4.21e-07!246;CL:0002159!7.20e-07!13 | |ontology_enrichment_celltype=CL:0000066!3.87e-23!254;CL:0000548!2.51e-10!679;CL:0000004!2.51e-10!679;CL:0000255!2.51e-10!679;CL:0000012!7.25e-10!682;CL:0002321!1.74e-07!248;CL:0000220!4.21e-07!246;CL:0002159!7.20e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.01e-11;10!CL:1000494;1.01e-11;10!CL:0002681;1.31e-09;12!CL:0002584;1.31e-09;12!CL:1000449;2.13e-09;15!CL:1000497;4.65e-08;17!CL:0002518;4.65e-08;17!CL:0002159;2.26e-07;14!CL:0000182;2.74e-07;12!CL:0000362;3.28e-07;9!CL:0000239;9.14e-07;3!CL:1000615;9.14e-07;3!CL:0002306;9.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.47e-19,253;CL:1000507,6.17e-12,10;CL:1000494,6.17e-12,10;CL:0002681,8.37e-10,12;CL:0002584,8.37e-10,12;CL:1000449,1.48e-09,15;CL:1000497,3.40e-08,17;CL:0002518,3.40e-08,17;CL:0000182,1.80e-07,12;CL:0002159,2.69e-07,14;CL:0000362,3.78e-07,9;CL:0000239,5.61e-07,3;CL:1000615,5.61e-07,3;CL:0002306,5.61e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.61e-16!106;DOID:0050687!1.24e-13!143;DOID:162!2.39e-08!235;DOID:14566!3.08e-08!239 | |ontology_enrichment_disease=DOID:305!1.61e-16!106;DOID:0050687!1.24e-13!143;DOID:162!2.39e-08!235;DOID:14566!3.08e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.66e-09,106;DOID:0050687,1.79e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.47e-12!169;UBERON:0000925!9.47e-12!169;UBERON:0006595!9.47e-12!169;UBERON:0000481!1.01e-11!347;UBERON:0003104!2.80e-11!238;UBERON:0009142!2.80e-11!238;UBERON:0008947!1.81e-10!38;UBERON:0003258!1.81e-10!38;UBERON:0000077!1.91e-10!130;UBERON:0000475!2.32e-10!365;UBERON:0001007!6.95e-10!155;UBERON:0001555!6.95e-10!155;UBERON:0007026!6.95e-10!155;UBERON:0009569!9.73e-10!113;UBERON:0001041!5.85e-09!98;UBERON:0001737!6.86e-09!9;UBERON:0002100!7.63e-09!216;UBERON:0005177!7.87e-09!107;UBERON:0000063!9.74e-09!97;UBERON:0000119!1.27e-08!312;UBERON:0004921!1.59e-08!129;UBERON:0004185!1.59e-08!129;UBERON:0000483!1.65e-08!309;UBERON:0000064!2.11e-08!219;UBERON:0001048!1.08e-07!168;UBERON:0000072!1.42e-07!46;UBERON:0000065!1.59e-07!53;UBERON:0005172!2.41e-07!55;UBERON:0005173!2.41e-07!55;UBERON:0005911!3.69e-07!82;UBERON:0002417!7.04e-07!61;UBERON:0000916!7.04e-07!61 | |ontology_enrichment_uberon=UBERON:0004119!9.47e-12!169;UBERON:0000925!9.47e-12!169;UBERON:0006595!9.47e-12!169;UBERON:0000481!1.01e-11!347;UBERON:0003104!2.80e-11!238;UBERON:0009142!2.80e-11!238;UBERON:0008947!1.81e-10!38;UBERON:0003258!1.81e-10!38;UBERON:0000077!1.91e-10!130;UBERON:0000475!2.32e-10!365;UBERON:0001007!6.95e-10!155;UBERON:0001555!6.95e-10!155;UBERON:0007026!6.95e-10!155;UBERON:0009569!9.73e-10!113;UBERON:0001041!5.85e-09!98;UBERON:0001737!6.86e-09!9;UBERON:0002100!7.63e-09!216;UBERON:0005177!7.87e-09!107;UBERON:0000063!9.74e-09!97;UBERON:0000119!1.27e-08!312;UBERON:0004921!1.59e-08!129;UBERON:0004185!1.59e-08!129;UBERON:0000483!1.65e-08!309;UBERON:0000064!2.11e-08!219;UBERON:0001048!1.08e-07!168;UBERON:0000072!1.42e-07!46;UBERON:0000065!1.59e-07!53;UBERON:0005172!2.41e-07!55;UBERON:0005173!2.41e-07!55;UBERON:0005911!3.69e-07!82;UBERON:0002417!7.04e-07!61;UBERON:0000916!7.04e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.03e-19;9!UBERON:0001557;1.03e-19;9!UBERON:0004211;1.01e-11;10!UBERON:0009773;1.01e-11;10!UBERON:0001231;1.01e-11;10!UBERON:0004810;1.01e-11;10!UBERON:0002423;3.11e-10;25!UBERON:0001225;1.31e-09;12!UBERON:0008987;1.31e-09;12!UBERON:0006555;2.13e-09;15!UBERON:0004819;2.13e-09;15!UBERON:0001285;2.13e-09;15!UBERON:0007684;2.13e-09;15!UBERON:0002365;2.98e-09;31!UBERON:0002330;2.98e-09;31!UBERON:0005172;3.47e-09;52!UBERON:0005173;3.47e-09;52!UBERON:0000072;1.91e-08;37!UBERON:0002107;2.01e-08;19!UBERON:0006925;2.01e-08;19!UBERON:0000065;6.25e-08;44!UBERON:0002113;8.64e-08;24!UBERON:0011143;8.64e-08;24!UBERON:0001851;2.31e-07;15!UBERON:0000353;2.31e-07;15!UBERON:0002417;2.34e-07;58!UBERON:0000916;2.34e-07;58!UBERON:0002203;3.29e-07;6!UBERON:0001768;3.29e-07;6!UBERON:0002200;3.29e-07;6!UBERON:0006554;5.67e-07;30!UBERON:0001008;5.67e-07;30!UBERON:0006853;9.14e-07;3!UBERON:0007685;9.14e-07;3!UBERON:0004134;9.14e-07;3 | |||
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| ||
|short_description=p@chr17:27052892..27052921,+ | |short_description=p@chr17:27052892..27052921,+ | ||
}} | }} |
Latest revision as of 15:04, 25 July 2015
Short description: | p@chr17:27052892..27052921, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27052892..27052921, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.47e-19 | 253 |
kidney tubule cell | 6.17e-12 | 10 |
nephron tubule epithelial cell | 6.17e-12 | 10 |
kidney cortical cell | 8.37e-10 | 12 |
renal cortical epithelial cell | 8.37e-10 | 12 |
epithelial cell of nephron | 1.48e-09 | 15 |
kidney cell | 3.40e-08 | 17 |
kidney epithelial cell | 3.40e-08 | 17 |
hepatocyte | 1.80e-07 | 12 |
general ecto-epithelial cell | 2.69e-07 | 14 |
epidermal cell | 3.78e-07 | 9 |
brush border epithelial cell | 5.61e-07 | 3 |
kidney cortex tubule cell | 5.61e-07 | 3 |
epithelial cell of proximal tubule | 5.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.66e-09 | 106 |
cell type cancer | 1.79e-07 | 143 |