FFCP PHASE1:Hg19::chrX:16964773..16964793,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9963 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NFH8,E9PFM4 | |||
|association_with_transcript=-20bp_to_ENST00000357277,ENST00000380063,NM_001080975,NM_004726,uc004cxv.1,uc004cxw.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_REPS2_5end | |||
|id=chrX:16964773..16964793,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.76e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.67e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.18e-20;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-40!115;UBERON:0001049!1.95e-34!57;UBERON:0005068!1.95e-34!57;UBERON:0006241!1.95e-34!57;UBERON:0007135!1.95e-34!57;UBERON:0002616!1.31e-28!59;UBERON:0000955!1.49e-28!69;UBERON:0006238!1.49e-28!69;UBERON:0002780!1.91e-28!41;UBERON:0001890!1.91e-28!41;UBERON:0006240!1.91e-28!41;UBERON:0003080!2.20e-27!42;UBERON:0001017!9.45e-27!82;UBERON:0005743!1.13e-25!86;UBERON:0000073!6.93e-25!94;UBERON:0001016!6.93e-25!94;UBERON:0001893!4.11e-24!34;UBERON:0002020!7.46e-24!34;UBERON:0003528!7.46e-24!34;UBERON:0002791!3.79e-23!33;UBERON:0001869!3.67e-22!32;UBERON:0003075!5.34e-22!86;UBERON:0007284!5.34e-22!86;UBERON:0002346!4.64e-20!90;UBERON:0002619!3.45e-19!22;UBERON:0000033!1.26e-18!123;UBERON:0000153!7.08e-18!129;UBERON:0007811!7.08e-18!129;UBERON:0001950!1.11e-17!20;UBERON:0003056!1.84e-17!61;UBERON:0000062!1.07e-16!511;UBERON:0000956!7.31e-16!25;UBERON:0000203!7.31e-16!25;UBERON:0004121!1.21e-13!169;UBERON:0000924!9.34e-13!173;UBERON:0006601!9.34e-13!173;UBERON:0000467!1.04e-11!625;UBERON:0000480!1.36e-11!626;UBERON:0000922!1.72e-10!612;UBERON:0000468!3.17e-10!659;UBERON:0002420!8.52e-10!9;UBERON:0007245!8.52e-10!9;UBERON:0010009!8.52e-10!9;UBERON:0010011!8.52e-10!9;UBERON:0000454!8.52e-10!9;UBERON:0002308!9.99e-10!9;UBERON:0000125!9.99e-10!9;UBERON:0002050!1.10e-09!605;UBERON:0005423!1.10e-09!605;UBERON:0004111!1.68e-09!241;UBERON:0000923!2.22e-09!604;UBERON:0005291!2.22e-09!604;UBERON:0006598!2.22e-09!604;UBERON:0002532!2.22e-09!604;UBERON:0000025!9.68e-09!194;UBERON:0003076!3.28e-08!15;UBERON:0003057!3.28e-08!15;UBERON:0009663!4.91e-08!7;UBERON:0000477!4.05e-07!286;UBERON:0000200!4.34e-07!6;UBERON:0004732!7.52e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.88e-50;41!UBERON:0001890;3.88e-50;41!UBERON:0001893;6.41e-49;34!UBERON:0000073;7.56e-48;53!UBERON:0002616;7.56e-48;53!UBERON:0003528;1.28e-46;34!UBERON:0002020;1.28e-46;34!UBERON:0001869;1.53e-45;32!UBERON:0002791;2.08e-45;32!UBERON:0002619;2.07e-38;22!UBERON:0001950;5.22e-38;20!UBERON:0000956;2.10e-33;25!UBERON:0000203;2.10e-33;25!UBERON:0000955;3.87e-33;68!UBERON:0001017;6.39e-31;75!UBERON:0002420;1.66e-25;9!UBERON:0000125;1.66e-25;9!UBERON:0007245;1.66e-25;9!UBERON:0002308;1.66e-25;9!UBERON:0010009;1.66e-25;9!UBERON:0010011;1.66e-25;9!UBERON:0000454;1.66e-25;9!UBERON:0001016;1.44e-23;83!UBERON:0009663;2.01e-20;7!UBERON:0007023;4.67e-18;114!UBERON:0000200;6.27e-18;6!UBERON:0002298;2.67e-17;6!UBERON:0004732;5.04e-17;13!UBERON:0001894;5.58e-15;7!UBERON:0004733;1.92e-14;12!UBERON:0002028;1.92e-14;12!UBERON:0003296;2.63e-12;4!UBERON:0010133;2.63e-12;4!UBERON:0000369;4.27e-12;4!UBERON:0002435;4.27e-12;4!UBERON:0000204;4.27e-12;4!UBERON:0001872;1.01e-10;5!UBERON:0001871;1.79e-10;6!UBERON:0002021;6.08e-10;5!UBERON:0003124;7.76e-10;3!UBERON:0000920;7.76e-10;3!UBERON:0001870;1.03e-09;3!UBERON:0000349;1.11e-09;5!UBERON:0000988;1.68e-09;3!UBERON:0001896;1.68e-09;3!UBERON:0005290;1.68e-09;3!UBERON:0005383;3.56e-09;3!UBERON:0005382;3.56e-09;3!UBERON:0011216;4.24e-09;132!UBERON:0002680;5.95e-08;9!UBERON:0001895;5.95e-08;9!UBERON:0002784;6.00e-08;4!UBERON:0005162;8.70e-08;2!UBERON:0000122;8.70e-08;2!UBERON:0001905;1.51e-07;2!UBERON:0002757;1.51e-07;2!UBERON:0010134;1.51e-07;2!UBERON:0005408;1.51e-07;2!UBERON:0001899;1.51e-07;2!UBERON:0001875;2.53e-07;2!UBERON:0006514;2.53e-07;2!UBERON:0010314;4.38e-07;132!UBERON:0002702;5.56e-07;2!UBERON:0002771;9.06e-07;2!UBERON:0001876;9.06e-07;2!UBERON:0002148;9.06e-07;2!UBERON:0006331;9.06e-07;2!UBERON:0009662;9.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.70e-88,56;UBERON:0005068,3.70e-88,56;UBERON:0006241,3.70e-88,56;UBERON:0007135,3.70e-88,56;UBERON:0000073,9.16e-85,53;UBERON:0002616,9.16e-85,53;UBERON:0000955,2.00e-73,68;UBERON:0006238,2.00e-73,68;UBERON:0002780,4.01e-71,41;UBERON:0001890,4.01e-71,41;UBERON:0003080,4.01e-71,41;UBERON:0006240,4.01e-71,41;UBERON:0001017,2.40e-69,81;UBERON:0001016,1.50e-64,89;UBERON:0003075,3.96e-60,82;UBERON:0007284,3.96e-60,82;UBERON:0001893,3.07e-57,34;UBERON:0002346,7.99e-57,86;UBERON:0007023,8.58e-57,114;UBERON:0003528,1.56e-56,34;UBERON:0002020,1.56e-56,34;UBERON:0001869,1.23e-51,32;UBERON:0002791,1.38e-51,32;UBERON:0003056,2.01e-48,61;UBERON:0010371,4.50e-45,104;UBERON:0002619,8.77e-39,22;UBERON:0001950,1.79e-38,20;UBERON:0010314,5.51e-35,132;UBERON:0000956,9.94e-34,25;UBERON:0000203,9.94e-34,25;UBERON:0011216,2.38e-28,223;UBERON:0004121,2.68e-28,171;UBERON:0000924,2.68e-28,171;UBERON:0006601,2.68e-28,171;UBERON:0002420,6.69e-26,9;UBERON:0007245,6.69e-26,9;UBERON:0010009,6.69e-26,9;UBERON:0010011,6.69e-26,9;UBERON:0000454,6.69e-26,9;UBERON:0000125,1.07e-25,9;UBERON:0002308,1.07e-25,9;UBERON:0000025,3.23e-25,192;UBERON:0009663,1.08e-20,7;UBERON:0004111,6.54e-20,240;UBERON:0000200,6.63e-18,6;UBERON:0003076,1.12e-17,15;UBERON:0003057,1.12e-17,15;UBERON:0002298,2.70e-17,6;UBERON:0004732,4.02e-17,13;UBERON:0001894,5.85e-15,7;UBERON:0006222,5.85e-15,7;UBERON:0004733,1.55e-14,12;UBERON:0002028,1.55e-14,12;UBERON:0007277,1.55e-14,12;UBERON:0000483,9.24e-14,306;UBERON:0000119,1.66e-13,309;UBERON:0000369,3.56e-12,4;UBERON:0002435,3.56e-12,4;UBERON:0000204,3.56e-12,4;UBERON:0010082,3.56e-12,4;UBERON:0003296,3.88e-12,4;UBERON:0010133,3.88e-12,4;UBERON:0001872,8.32e-11,5;UBERON:0001871,1.38e-10,6;UBERON:0002021,5.51e-10,5;UBERON:0001870,6.62e-10,3;UBERON:0000920,8.67e-10,3;UBERON:0000349,1.21e-09,5;UBERON:0001896,1.43e-09,3;UBERON:0005290,1.43e-09,3;UBERON:0010096,1.43e-09,3;UBERON:0000988,1.98e-09,3;UBERON:0005383,2.50e-09,3;UBERON:0005382,2.50e-09,3;UBERON:0002784,5.02e-08,4;UBERON:0002680,5.41e-08,9;UBERON:0001895,5.41e-08,9;UBERON:0010092,5.41e-08,9;UBERON:0005162,8.88e-08,2;UBERON:0000122,8.88e-08,2;UBERON:0001905,1.15e-07,2;UBERON:0002757,1.15e-07,2;UBERON:0010134,1.15e-07,2;UBERON:0005408,1.15e-07,2;UBERON:0001899,1.15e-07,2;UBERON:0001875,2.08e-07,2;UBERON:0006514,2.08e-07,2;UBERON:0002702,4.45e-07,2;UBERON:0001876,6.77e-07,2;UBERON:0002771,9.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.464448369948228,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0.223915474239924,0.32389366601898,1.03030227053675,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,1.24564449799115,0,0,0,0,0.368277635987565,0.632924774881769,0,0.425208599930087,0,0,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.0478326039817,0,0,0,0,0.398873881556595,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.773043412653187,0,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.288239906833923,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0.689170200620878,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.296964680832639,0,1.9882952955326,2.11004124615769,0,0,0,0.19924798825107,0,0,0.818149460017238,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,1.93866549219044,3.24688343566479,1.99613798001194,0,0.349839999984783,0,0,0,0,0,0,0.173624994933292,1.77148277162768,1.5677537021303,0,2.54332297841817,1.77328571372128,1.53569778007781,0,0.139423744278603,0.538651809526579,0,0,0,0.108647371922008,2.23300811812344,1.37396390102793,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,5.05508497355078,0,1.87411556580271,0.182454789215666,0.19566461893209,0,3.55125962564451,0,0.30607276163049,0.252746318513952,0,0.103688191397247,0,0,0.627865836814451,1.19472429772959,0.284609546029793,0,0,0.195984794828755,0.0870592065804026,0.698906672968121,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,1.80784592624426,0,0,2.72236422610278,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,3.60252173225874,2.60120219894787,0,0,0,0.279282401272254,0,0,0.599037001496973,0.429226048136571,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0.449947783103001,0.77380195455795,2.61223093629506,0.335434687599266,0.315222829196793,0.786818822024972,0.316801009558219,0,1.34340638123612,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0.732761168390412,0,1.29282956361551,2.24795422962573,0,0,1.28144895081234,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,1.77213635993397,1.70836770862748,3.3801551290755,1.72022758707021,2.5513681853476,2.11127770000704,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0.194860308839388,0.265729680626726,0,0,0.245772908753719,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0,3.21146125482298,1.41696576325585,3.19267718114303,2.66651273512982,0.504143392443436,2.55881834117606,2.09918339321406,4.28308260777463,0.196295437002051,0.471878893390961,0,0,0,0,0,0.376051641746286,0,1.56302802246618,0,0,0.591424344868181,3.37687923091973,3.90539049306924,3.72036233702131,3.55128537085878,0.546974809018219,0,0,0,0.127762427639595,3.74991285114801,3.69912094440706,1.21393120847326,1.13831095675649,0.354809480650555,0,0.5144640283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| |||
|short_description=p4@REPS2 | |||
}} |
Revision as of 04:58, 23 January 2014
Short description: | p4@REPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_REPS2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -20bp_to_ENST00000357277, ENST00000380063, NM_001080975, NM_004726, uc004cxv.1, uc004cxw.1_5end |
EntrezGene: | REPS2 |
HGNC: | 9963 |
UniProt: | Q8NFH8E9PFM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.67e-10 | 3 |