FFCP PHASE1:Hg19::chr16:86604624..86604648,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr16:86604624..86604648,+ | |||
|id=chr16:86604624..86604648,+ | |||
|ontology_enrichment_celltype=CL:1000449!3.31e-20!16;CL:1000507!8.89e-18!12;CL:1000494!8.89e-18!12;CL:1000497!1.03e-17!18;CL:0002518!1.03e-17!18;CL:0002681!2.32e-12!13;CL:0002584!2.32e-12!13;CL:0000071!2.36e-10!18;CL:0002546!2.36e-10!18;CL:0000222!1.36e-09!119;CL:0002544!3.03e-09!6;CL:1000413!3.31e-09!9;CL:1000612!2.85e-08!7;CL:1000746!2.85e-08!7;CL:0002078!3.10e-08!44;CL:0000115!1.81e-07!35;CL:0002139!1.99e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.02e-63;10!CL:1000494;1.02e-63;10!CL:1000449;3.69e-55;15!CL:1000497;1.30e-48;17!CL:0002518;1.30e-48;17!CL:0000650;1.95e-27;2!CL:1000500;1.95e-27;2!CL:1000618;1.95e-27;2!CL:1001318;1.95e-27;2!CL:0002173;1.95e-27;2!CL:0002681;2.62e-27;12!CL:0002584;2.62e-27;12!CL:1000746;1.39e-17;7!CL:1000612;1.39e-17;7!CL:0000785;4.72e-15;1!CL:0000819;4.72e-15;1!CL:0000817;5.42e-15;1!CL:0000669;3.05e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.24e-63,10;CL:1000494,1.24e-63,10;CL:1000449,3.83e-55,15;CL:1000497,1.34e-48,17;CL:0002518,1.34e-48,17;CL:0000650,1.83e-27,2;CL:1000500,1.83e-27,2;CL:1000618,1.83e-27,2;CL:1001318,1.83e-27,2;CL:0002173,1.83e-27,2;CL:0002681,2.35e-27,12;CL:0002584,2.35e-27,12;CL:0000817,3.52e-19,3;CL:1000746,1.24e-17,7;CL:1000612,1.24e-17,7;CL:0000819,4.73e-15,1;CL:0000669,2.95e-14,4;CL:0000785,3.56e-08,2;CL:0000955,3.56e-08,2;CL:0000818,3.56e-08,2;CL:0000954,3.56e-08,2;CL:0000816,3.56e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000954;3.56e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;4.72e-15;1!DOID:8675;4.72e-15;1!DOID:12603;7.13e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.73e-15,1;DOID:8675,4.73e-15,1;DOID:12603,7.13e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0004211!3.31e-20!16;UBERON:0001285!3.31e-20!16;UBERON:0007684!3.31e-20!16;UBERON:0003220!3.31e-20!16;UBERON:0004208!3.31e-20!16;UBERON:0006555!6.93e-19!17;UBERON:0005103!6.93e-19!17;UBERON:0000083!6.93e-19!17;UBERON:0009201!6.93e-19!17;UBERON:0004819!6.93e-19!17;UBERON:0006553!6.93e-19!17;UBERON:0003074!6.93e-19!17;UBERON:0003060!6.93e-19!17;UBERON:0009773!8.89e-18!12;UBERON:0001231!8.89e-18!12;UBERON:0004810!8.89e-18!12;UBERON:0000080!1.03e-17!18;UBERON:0002120!1.03e-17!18;UBERON:0004875!1.03e-17!18;UBERON:0005721!1.03e-17!18;UBERON:0005754!1.03e-17!18;UBERON:0007297!1.03e-17!18;UBERON:0002113!5.77e-16!27;UBERON:0003918!5.77e-16!27;UBERON:0005095!5.77e-16!27;UBERON:0007687!5.77e-16!27;UBERON:0004876!1.02e-15!20;UBERON:0003887!7.30e-15!21;UBERON:0000489!5.02e-13!32;UBERON:0003914!1.74e-12!118;UBERON:0001225!2.32e-12!13;UBERON:0008987!2.32e-12!13;UBERON:0000058!1.39e-11!26;UBERON:0001986!2.36e-10!18;UBERON:0004638!2.36e-10!18;UBERON:0004852!2.36e-10!18;UBERON:0002049!4.60e-10!79;UBERON:0007798!4.60e-10!79;UBERON:0001981!4.80e-10!60;UBERON:0007500!4.80e-10!60;UBERON:0004537!4.80e-10!60;UBERON:0006965!4.80e-10!60;UBERON:0001851!7.89e-10!16;UBERON:0003915!3.31e-09!9;UBERON:0004700!3.31e-09!9;UBERON:0001917!3.31e-09!9;UBERON:0000353!3.48e-09!17;UBERON:0006914!5.92e-09!25;UBERON:0006554!1.00e-08!44;UBERON:0001008!1.79e-08!45;UBERON:0000074!2.85e-08!7;UBERON:0001229!2.85e-08!7;UBERON:0001230!2.85e-08!7;UBERON:0005749!2.85e-08!7;UBERON:0004199!2.85e-08!7;UBERON:0004209!2.85e-08!7;UBERON:0004198!2.85e-08!7;UBERON:0000055!2.93e-08!69;UBERON:0000487!3.18e-08!22;UBERON:0000119!3.35e-08!312;UBERON:0003103!1.23e-07!69;UBERON:0003064!1.63e-07!37;UBERON:0000483!3.75e-07!309;UBERON:0000025!4.44e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.02e-63;10!UBERON:0009773;1.02e-63;10!UBERON:0001231;1.02e-63;10!UBERON:0004810;1.02e-63;10!UBERON:0006555;3.69e-55;15!UBERON:0004819;3.69e-55;15!UBERON:0001285;3.69e-55;15!UBERON:0007684;3.69e-55;15!UBERON:0002113;2.79e-34;24!UBERON:0011143;2.79e-34;24!UBERON:0000489;2.86e-28;29!UBERON:0003567;1.95e-27;2!UBERON:0003838;1.95e-27;2!UBERON:0003586;1.95e-27;2!UBERON:0005169;1.95e-27;2!UBERON:0002321;1.95e-27;2!UBERON:0005215;1.95e-27;2!UBERON:0002303;1.95e-27;2!UBERON:0002319;1.95e-27;2!UBERON:0001225;2.62e-27;12!UBERON:0008987;2.62e-27;12!UBERON:0006554;2.62e-27;30!UBERON:0001008;2.62e-27;30!UBERON:0001851;7.18e-22;15!UBERON:0000353;7.18e-22;15!UBERON:0000074;1.39e-17;7!UBERON:0001229;1.39e-17;7!UBERON:0003891;3.05e-14;4!UBERON:0005172;5.58e-12;52!UBERON:0005173;5.58e-12;52!UBERON:0003914;1.04e-09;74!UBERON:0003103;2.20e-09;61!UBERON:0002417;4.38e-08;58!UBERON:0000916;4.38e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.24e-63,10;UBERON:0004211,3.83e-55,15;UBERON:0009773,3.83e-55,15;UBERON:0001231,3.83e-55,15;UBERON:0001285,3.83e-55,15;UBERON:0007684,3.83e-55,15;UBERON:0004208,3.83e-55,15;UBERON:0006555,1.15e-51,16;UBERON:0004819,1.15e-51,16;UBERON:0002113,1.37e-31,26;UBERON:0003918,1.37e-31,26;UBERON:0011143,1.37e-31,26;UBERON:0005095,1.37e-31,26;UBERON:0007687,1.37e-31,26;UBERON:0003567,1.83e-27,2;UBERON:0003838,1.83e-27,2;UBERON:0003586,1.83e-27,2;UBERON:0005169,1.83e-27,2;UBERON:0002321,1.83e-27,2;UBERON:0005215,1.83e-27,2;UBERON:0002303,1.83e-27,2;UBERON:0002319,1.83e-27,2;UBERON:0001225,2.35e-27,12;UBERON:0008987,2.35e-27,12;UBERON:0000489,2.12e-26,31;UBERON:0001851,6.58e-22,15;UBERON:0000353,6.58e-22,15;UBERON:0010532,1.24e-17,7;UBERON:0000074,1.24e-17,7;UBERON:0001229,1.24e-17,7;UBERON:0001230,1.24e-17,7;UBERON:0003220,1.24e-17,7;UBERON:0005749,1.24e-17,7;UBERON:0004199,1.24e-17,7;UBERON:0004209,1.24e-17,7;UBERON:0004198,1.24e-17,7;UBERON:0006554,3.44e-17,47;UBERON:0001008,8.12e-17,48;UBERON:0005103,1.64e-15,8;UBERON:0000083,1.64e-15,8;UBERON:0009201,1.64e-15,8;UBERON:0006553,1.64e-15,8;UBERON:0003074,1.64e-15,8;UBERON:0003060,1.64e-15,8;UBERON:0005172,7.19e-15,54;UBERON:0005173,7.19e-15,54;UBERON:0003891,2.95e-14,4;UBERON:0000080,7.36e-14,9;UBERON:0002120,7.36e-14,9;UBERON:0004875,7.36e-14,9;UBERON:0005721,7.36e-14,9;UBERON:0005754,7.36e-14,9;UBERON:0007297,7.36e-14,9;UBERON:0002417,2.61e-13,60;UBERON:0000916,2.61e-13,60;UBERON:0003103,1.18e-11,68;UBERON:0004876,1.89e-11,11;UBERON:0003887,1.52e-10,12;UBERON:0003914,3.92e-10,117;UBERON:0009569,1.45e-08,112;UBERON:0005177,1.37e-07,101;UBERON:0003104,4.35e-07,160;UBERON:0009142,4.35e-07,160;UBERON:0000058,7.49e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0,0.125542639594803,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,1.15523005656622,2.35304930753057,2.92278449306521,1.26661954671451,0,0,0.431831832204279,1.54227252690289,1.35473218771926,3.01013864312912,0,0,1.79099803777743,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,1.59691809095107,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,6.13150477914872,12.2628831029978,0,0,0,0,0,1.29848776109822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7121199166643,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,8.43820671513411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:86604624..86604648,+ | |||
}} |
Revision as of 12:39, 20 January 2014
Short description: | p@chr16:86604624..86604648, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86604624..86604648, + |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.24e-63 | 10 |
nephron tubule epithelial cell | 1.24e-63 | 10 |
epithelial cell of nephron | 3.83e-55 | 15 |
kidney cell | 1.34e-48 | 17 |
kidney epithelial cell | 1.34e-48 | 17 |
mesangial cell | 1.83e-27 | 2 |
kidney interstitial cell | 1.83e-27 | 2 |
juxtaglomerular complex cell | 1.83e-27 | 2 |
renal interstitial pericyte | 1.83e-27 | 2 |
extraglomerular mesangial cell | 1.83e-27 | 2 |
kidney cortical cell | 2.35e-27 | 12 |
renal cortical epithelial cell | 2.35e-27 | 12 |
precursor B cell | 3.52e-19 | 3 |
glomerular cell | 1.24e-17 | 7 |
kidney corpuscule cell | 1.24e-17 | 7 |
B-1 B cell | 4.73e-15 | 1 |
pericyte cell | 2.95e-14 | 4 |
mature B cell | 3.56e-08 | 2 |
pre-B-II cell | 3.56e-08 | 2 |
transitional stage B cell | 3.56e-08 | 2 |
small pre-B-II cell | 3.56e-08 | 2 |
immature B cell | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.73e-15 | 1 |
lymphosarcoma | 4.73e-15 | 1 |
acute leukemia | 7.13e-15 | 1 |