FFCP PHASE1:Hg19::chr9:113431137..113431153,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4593|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7525|TSSclassifier=S|UniProt=O15146|association_with_transcript=50bp_to_uc004bex.2,uc004bey.2_5end|description=CAGE_peak_3_at_MUSK_5end|id=chr9:113431137..113431153,+|ontology_enrichment_celltype=CL:0002504!5.62e-14!3;CL:1000279!5.62e-14!3;CL:1000280!5.62e-14!3;CL:0000515!6.00e-11!4|ontology_enrichment_celltype_v019=CL:0000515;1.93e-07;3!CL:0002504;2.79e-07;3!CL:1000279;2.79e-07;3!CL:1000280;2.79e-07;3|ontology_enrichment_celltype_v019_2=CL:0002504,2.47e-07,3;CL:1000279,2.47e-07,3;CL:1000280,2.47e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000059!1.85e-14!11;UBERON:0007023!3.43e-13!115;UBERON:0001155!1.62e-12!9;UBERON:0000160!1.05e-11!27;UBERON:0002385!6.40e-11!63;UBERON:0001015!6.40e-11!63;UBERON:0000383!6.40e-11!63;UBERON:0004921!5.60e-09!129;UBERON:0004185!5.60e-09!129;UBERON:0005409!9.65e-09!35;UBERON:0001134!3.54e-08!61;UBERON:0002036!3.54e-08!61;UBERON:0003082!3.54e-08!61;UBERON:0001007!1.31e-07!155;UBERON:0001555!1.31e-07!155;UBERON:0007026!1.31e-07!155;UBERON:0004119!1.91e-07!169;UBERON:0000925!1.91e-07!169;UBERON:0006595!1.91e-07!169;UBERON:0000481!3.31e-07!347;UBERON:0001135!3.38e-07!15;UBERON:0004290!8.07e-07!70|ontology_enrichment_uberon_v019=UBERON:0000160;4.92e-25;17!UBERON:0005409;1.22e-19;22!UBERON:0001389;3.25e-19;1!UBERON:0000026;3.25e-19;1!UBERON:0008784;3.25e-19;1!UBERON:0006058;3.25e-19;1!UBERON:0003663;3.25e-19;1!UBERON:0004256;3.25e-19;1!UBERON:0004708;3.25e-19;1!UBERON:0002101;3.25e-19;1!UBERON:0004709;3.25e-19;1!UBERON:0002529;3.25e-19;1!UBERON:0010538;3.25e-19;1!UBERON:0003661;3.25e-19;1!UBERON:0010890;3.25e-19;1!UBERON:0002471;3.25e-19;1!UBERON:0001383;3.25e-19;1!UBERON:0010758;3.25e-19;1!UBERON:0010707;3.25e-19;1!UBERON:0000978;3.25e-19;1!UBERON:0002103;3.25e-19;1!UBERON:0001665;3.25e-19;1!UBERON:0003823;3.25e-19;1!UBERON:0000154;3.25e-19;1!UBERON:0010709;3.25e-19;1!UBERON:0001155;1.58e-18;9!UBERON:0000059;2.74e-15;11!UBERON:0004921;4.88e-13;33!UBERON:0001134;7.21e-11;16!UBERON:0002036;7.21e-11;16!UBERON:0005090;2.72e-10;2!UBERON:0001630;2.72e-10;2!UBERON:0002385;1.32e-09;31!UBERON:0001015;1.32e-09;31!UBERON:0000383;1.32e-09;31|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.46e-25,17;UBERON:0005418,2.71e-19,1;UBERON:0001389,2.71e-19,1;UBERON:0000026,2.71e-19,1;UBERON:0008784,2.71e-19,1;UBERON:0006058,2.71e-19,1;UBERON:0003663,2.71e-19,1;UBERON:0004256,2.71e-19,1;UBERON:0004708,2.71e-19,1;UBERON:0002101,2.71e-19,1;UBERON:0004709,2.71e-19,1;UBERON:0002529,2.71e-19,1;UBERON:0010538,2.71e-19,1;UBERON:0003661,2.71e-19,1;UBERON:0010890,2.71e-19,1;UBERON:0002471,2.71e-19,1;UBERON:0001383,2.71e-19,1;UBERON:0004357,2.71e-19,1;UBERON:0004347,2.71e-19,1;UBERON:0005420,2.71e-19,1;UBERON:0005732,2.71e-19,1;UBERON:0010758,2.71e-19,1;UBERON:0010707,2.71e-19,1;UBERON:0000978,2.71e-19,1;UBERON:0002103,2.71e-19,1;UBERON:0001665,2.71e-19,1;UBERON:0003823,2.71e-19,1;UBERON:0000154,2.71e-19,1;UBERON:0010709,2.71e-19,1;UBERON:0005733,2.71e-19,1;UBERON:0005730,2.71e-19,1;UBERON:0001155,1.25e-18,9;UBERON:0005409,2.00e-17,25;UBERON:0000059,2.25e-15,11;UBERON:0005090,2.49e-10,2;UBERON:0001630,2.49e-10,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.410952645100767,4.1184021545176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0,0,0,0,0,0.870036464629098,0,0,0,0,0.145016693914229,0,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,1.97859703341646,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.68069372556344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4593 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7525 | |||
|TSSclassifier=S | |||
|UniProt=O15146 | |||
|association_with_transcript=50bp_to_uc004bex.2,uc004bey.2_5end | |||
|description=CAGE_peak_3_at_MUSK_5end | |||
|id=chr9:113431137..113431153,+ | |||
|ontology_enrichment_celltype=CL:0002504!5.62e-14!3;CL:1000279!5.62e-14!3;CL:1000280!5.62e-14!3;CL:0000515!6.00e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0000515;1.93e-07;3!CL:0002504;2.79e-07;3!CL:1000279;2.79e-07;3!CL:1000280;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,2.47e-07,3;CL:1000279,2.47e-07,3;CL:1000280,2.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.85e-14!11;UBERON:0007023!3.43e-13!115;UBERON:0001155!1.62e-12!9;UBERON:0000160!1.05e-11!27;UBERON:0002385!6.40e-11!63;UBERON:0001015!6.40e-11!63;UBERON:0000383!6.40e-11!63;UBERON:0004921!5.60e-09!129;UBERON:0004185!5.60e-09!129;UBERON:0005409!9.65e-09!35;UBERON:0001134!3.54e-08!61;UBERON:0002036!3.54e-08!61;UBERON:0003082!3.54e-08!61;UBERON:0001007!1.31e-07!155;UBERON:0001555!1.31e-07!155;UBERON:0007026!1.31e-07!155;UBERON:0004119!1.91e-07!169;UBERON:0000925!1.91e-07!169;UBERON:0006595!1.91e-07!169;UBERON:0000481!3.31e-07!347;UBERON:0001135!3.38e-07!15;UBERON:0004290!8.07e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.92e-25;17!UBERON:0005409;1.22e-19;22!UBERON:0001389;3.25e-19;1!UBERON:0000026;3.25e-19;1!UBERON:0008784;3.25e-19;1!UBERON:0006058;3.25e-19;1!UBERON:0003663;3.25e-19;1!UBERON:0004256;3.25e-19;1!UBERON:0004708;3.25e-19;1!UBERON:0002101;3.25e-19;1!UBERON:0004709;3.25e-19;1!UBERON:0002529;3.25e-19;1!UBERON:0010538;3.25e-19;1!UBERON:0003661;3.25e-19;1!UBERON:0010890;3.25e-19;1!UBERON:0002471;3.25e-19;1!UBERON:0001383;3.25e-19;1!UBERON:0010758;3.25e-19;1!UBERON:0010707;3.25e-19;1!UBERON:0000978;3.25e-19;1!UBERON:0002103;3.25e-19;1!UBERON:0001665;3.25e-19;1!UBERON:0003823;3.25e-19;1!UBERON:0000154;3.25e-19;1!UBERON:0010709;3.25e-19;1!UBERON:0001155;1.58e-18;9!UBERON:0000059;2.74e-15;11!UBERON:0004921;4.88e-13;33!UBERON:0001134;7.21e-11;16!UBERON:0002036;7.21e-11;16!UBERON:0005090;2.72e-10;2!UBERON:0001630;2.72e-10;2!UBERON:0002385;1.32e-09;31!UBERON:0001015;1.32e-09;31!UBERON:0000383;1.32e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.46e-25,17;UBERON:0005418,2.71e-19,1;UBERON:0001389,2.71e-19,1;UBERON:0000026,2.71e-19,1;UBERON:0008784,2.71e-19,1;UBERON:0006058,2.71e-19,1;UBERON:0003663,2.71e-19,1;UBERON:0004256,2.71e-19,1;UBERON:0004708,2.71e-19,1;UBERON:0002101,2.71e-19,1;UBERON:0004709,2.71e-19,1;UBERON:0002529,2.71e-19,1;UBERON:0010538,2.71e-19,1;UBERON:0003661,2.71e-19,1;UBERON:0010890,2.71e-19,1;UBERON:0002471,2.71e-19,1;UBERON:0001383,2.71e-19,1;UBERON:0004357,2.71e-19,1;UBERON:0004347,2.71e-19,1;UBERON:0005420,2.71e-19,1;UBERON:0005732,2.71e-19,1;UBERON:0010758,2.71e-19,1;UBERON:0010707,2.71e-19,1;UBERON:0000978,2.71e-19,1;UBERON:0002103,2.71e-19,1;UBERON:0001665,2.71e-19,1;UBERON:0003823,2.71e-19,1;UBERON:0000154,2.71e-19,1;UBERON:0010709,2.71e-19,1;UBERON:0005733,2.71e-19,1;UBERON:0005730,2.71e-19,1;UBERON:0001155,1.25e-18,9;UBERON:0005409,2.00e-17,25;UBERON:0000059,2.25e-15,11;UBERON:0005090,2.49e-10,2;UBERON:0001630,2.49e-10,2 | |||
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|short_description=p3@MUSK | |||
}} |
Revision as of 06:56, 14 September 2013
Short description: | p3@MUSK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MUSK_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_uc004bex.2, uc004bey.2_5end |
EntrezGene: | MUSK |
HGNC: | 7525 |
UniProt: | O15146 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 2.47e-07 | 3 |
smooth muscle cell of large intestine | 2.47e-07 | 3 |
smooth muscle cell of colon | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.46e-25 | 17 |
hindlimb bud | 2.71e-19 | 1 |
soleus muscle | 2.71e-19 | 1 |
appendage | 2.71e-19 | 1 |
lower limb segment | 2.71e-19 | 1 |
multi-limb segment region | 2.71e-19 | 1 |
hindlimb muscle | 2.71e-19 | 1 |
hindlimb zeugopod muscle | 2.71e-19 | 1 |
paired limb/fin | 2.71e-19 | 1 |
limb | 2.71e-19 | 1 |
pelvic appendage | 2.71e-19 | 1 |
limb segment | 2.71e-19 | 1 |
paired limb/fin segment | 2.71e-19 | 1 |
limb muscle | 2.71e-19 | 1 |
pelvic complex muscle | 2.71e-19 | 1 |
zeugopod | 2.71e-19 | 1 |
muscle of leg | 2.71e-19 | 1 |
paired limb/fin bud | 2.71e-19 | 1 |
limb bud | 2.71e-19 | 1 |
pelvic appendage bud | 2.71e-19 | 1 |
limb/fin field | 2.71e-19 | 1 |
subdivision of organism along appendicular axis | 2.71e-19 | 1 |
appendage girdle complex | 2.71e-19 | 1 |
leg | 2.71e-19 | 1 |
hindlimb | 2.71e-19 | 1 |
triceps surae | 2.71e-19 | 1 |
hindlimb zeugopod | 2.71e-19 | 1 |
posterior region of body | 2.71e-19 | 1 |
pelvic complex | 2.71e-19 | 1 |
limb field | 2.71e-19 | 1 |
hindlimb/pelvic fin field | 2.71e-19 | 1 |
colon | 1.25e-18 | 9 |
gastrointestinal system | 2.00e-17 | 25 |
large intestine | 2.25e-15 | 11 |
muscle structure | 2.49e-10 | 2 |
muscle organ | 2.49e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.