FFCP PHASE1:Hg19::chr19:51472081..51472088,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5653|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6367|TSSclassifier=S|UniProt=Q92876|association_with_transcript=-34bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end|coexpression_cluster_id=C849|description=CAGE_peak_8_at_KLK6_5end|id=chr19:51472081..51472088,-|ontology_enrichment_celltype=CL:0000066!2.42e-18!254;CL:1000507!1.59e-14!12;CL:1000494!1.59e-14!12;CL:1000449!1.71e-10!16;CL:0000239!9.89e-10!3;CL:1000615!9.89e-10!3;CL:0002306!9.89e-10!3;CL:1000497!3.74e-09!18;CL:0002518!3.74e-09!18;CL:0002178!4.34e-09!3;CL:0000223!5.47e-08!59;CL:0002076!9.72e-08!43;CL:0000076!3.70e-07!62;CL:0002251!4.32e-07!21;CL:1000415!7.26e-07!2|ontology_enrichment_celltype_v019=CL:1000507;3.70e-38;10!CL:1000494;3.70e-38;10!CL:1000449;3.17e-25;15!CL:0000239;8.40e-25;3!CL:1000615;8.40e-25;3!CL:0002306;8.40e-25;3!CL:1000497;3.54e-22;17!CL:0002518;3.54e-22;17!CL:0002681;1.01e-16;12!CL:0002584;1.01e-16;12!CL:0002178;1.32e-11;3!CL:0000083;8.89e-09;4!CL:0000082;5.09e-07;19|ontology_enrichment_celltype_v019_2=CL:1000507,3.70e-38,10;CL:1000494,3.70e-38,10;CL:1000449,3.17e-25,15;CL:0000239,8.07e-25,3;CL:1000615,8.07e-25,3;CL:0002306,8.07e-25,3;CL:1000497,3.54e-22,17;CL:0002518,3.54e-22,17;CL:0002681,1.01e-16,12;CL:0002584,1.01e-16,12;CL:0000066,1.61e-14,253;CL:0002178,1.22e-11,3;CL:0000083,8.21e-09,4;CL:0000082,5.09e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!5.73e-21!106;DOID:299!3.31e-16!25;DOID:0050687!3.03e-15!143;DOID:1749!5.51e-14!14;DOID:4074!7.06e-07!2;DOID:4905!7.06e-07!2;DOID:3498!7.06e-07!2;DOID:3493!8.85e-07!2|ontology_enrichment_disease_v019=DOID:4074;1.23e-16;2!DOID:4905;1.23e-16;2!DOID:3498;1.23e-16;2!DOID:299;3.59e-15;25!DOID:3111;9.43e-10;1!DOID:3603;9.43e-10;1!DOID:1324;7.31e-09;15!DOID:1793;8.89e-09;4!DOID:0050615;2.57e-08;16!DOID:305;7.99e-07;106|ontology_enrichment_disease_v019_2=DOID:4074,1.05e-16,2;DOID:4905,1.05e-16,2;DOID:3498,1.05e-16,2;DOID:305,1.63e-16,106;DOID:299,3.44e-15,25;DOID:0050687,1.72e-11,143;DOID:3111,9.44e-10,1;DOID:3603,9.44e-10,1;DOID:1324,7.31e-09,15;DOID:1793,8.21e-09,4;DOID:0050615,2.57e-08,16;DOID:162,9.27e-07,235|ontology_enrichment_uberon=UBERON:0009773!1.59e-14!12;UBERON:0001231!1.59e-14!12;UBERON:0004810!1.59e-14!12;UBERON:0003886!6.13e-14!63;UBERON:0000464!2.14e-13!104;UBERON:0000466!8.22e-13!126;UBERON:0002553!5.39e-12!70;UBERON:0000058!3.45e-11!26;UBERON:0004211!1.71e-10!16;UBERON:0001285!1.71e-10!16;UBERON:0007684!1.71e-10!16;UBERON:0003220!1.71e-10!16;UBERON:0004208!1.71e-10!16;UBERON:0002294!8.21e-10!7;UBERON:0001173!8.21e-10!7;UBERON:0004912!8.21e-10!7;UBERON:0006555!8.76e-10!17;UBERON:0005103!8.76e-10!17;UBERON:0000083!8.76e-10!17;UBERON:0009201!8.76e-10!17;UBERON:0004819!8.76e-10!17;UBERON:0006553!8.76e-10!17;UBERON:0003074!8.76e-10!17;UBERON:0003060!8.76e-10!17;UBERON:0006853!9.89e-10!3;UBERON:0007685!9.89e-10!3;UBERON:0004134!9.89e-10!3;UBERON:0005177!1.03e-09!107;UBERON:0000080!3.74e-09!18;UBERON:0002120!3.74e-09!18;UBERON:0004875!3.74e-09!18;UBERON:0005721!3.74e-09!18;UBERON:0005754!3.74e-09!18;UBERON:0007297!3.74e-09!18;UBERON:0002110!4.11e-09!3;UBERON:0006242!4.11e-09!3;UBERON:0003064!3.24e-08!37;UBERON:0004876!4.38e-08!20;UBERON:0000344!1.08e-07!12;UBERON:0003887!1.26e-07!21;UBERON:0001007!4.60e-07!155;UBERON:0001555!4.60e-07!155;UBERON:0007026!4.60e-07!155;UBERON:0002113!4.91e-07!27;UBERON:0003918!4.91e-07!27;UBERON:0005095!4.91e-07!27;UBERON:0007687!4.91e-07!27;UBERON:0002323!5.68e-07!46;UBERON:0000489!7.07e-07!32;UBERON:0003343!7.30e-07!4;UBERON:0004785!7.30e-07!4;UBERON:0005172!7.34e-07!55;UBERON:0005173!7.34e-07!55|ontology_enrichment_uberon_v019=UBERON:0004211;3.70e-38;10!UBERON:0009773;3.70e-38;10!UBERON:0001231;3.70e-38;10!UBERON:0004810;3.70e-38;10!UBERON:0006555;3.17e-25;15!UBERON:0004819;3.17e-25;15!UBERON:0001285;3.17e-25;15!UBERON:0007684;3.17e-25;15!UBERON:0006853;8.40e-25;3!UBERON:0007685;8.40e-25;3!UBERON:0004134;8.40e-25;3!UBERON:0001225;1.01e-16;12!UBERON:0008987;1.01e-16;12!UBERON:0002113;1.68e-15;24!UBERON:0011143;1.68e-15;24!UBERON:0001851;2.36e-13;15!UBERON:0000353;2.36e-13;15!UBERON:0000489;1.06e-12;29!UBERON:0006554;2.99e-12;30!UBERON:0001008;2.99e-12;30!UBERON:0004913;7.97e-10;1!UBERON:0003703;7.97e-10;1!UBERON:0001174;7.97e-10;1!UBERON:0004914;7.97e-10;1!UBERON:0005177;3.96e-08;99!UBERON:0005172;2.44e-07;52!UBERON:0005173;2.44e-07;52!UBERON:0000945;2.63e-07;5!UBERON:0010039;2.63e-07;5!UBERON:0004802;5.09e-07;19!UBERON:0000115;5.09e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.70e-38,10;UBERON:0004211,3.17e-25,15;UBERON:0009773,3.17e-25,15;UBERON:0001231,3.17e-25,15;UBERON:0001285,3.17e-25,15;UBERON:0007684,3.17e-25,15;UBERON:0004208,3.17e-25,15;UBERON:0006853,8.07e-25,3;UBERON:0007685,8.07e-25,3;UBERON:0004134,8.07e-25,3;UBERON:0006555,1.32e-23,16;UBERON:0004819,1.32e-23,16;UBERON:0001225,1.01e-16,12;UBERON:0008987,1.01e-16,12;UBERON:0002113,2.99e-14,26;UBERON:0003918,2.99e-14,26;UBERON:0011143,2.99e-14,26;UBERON:0005095,2.99e-14,26;UBERON:0007687,2.99e-14,26;UBERON:0001851,2.36e-13,15;UBERON:0000353,2.36e-13,15;UBERON:0005177,5.45e-13,101;UBERON:0000489,7.86e-12,31;UBERON:0004913,7.98e-10,1;UBERON:0003703,7.98e-10,1;UBERON:0001174,7.98e-10,1;UBERON:0004914,7.98e-10,1;UBERON:0005172,2.05e-08,54;UBERON:0005173,2.05e-08,54;UBERON:0009569,3.14e-08,112;UBERON:0006554,1.54e-07,47;UBERON:0002417,1.81e-07,60;UBERON:0000916,1.81e-07,60;UBERON:0001008,2.29e-07,48;UBERON:0004802,5.09e-07,19;UBERON:0000115,5.09e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.609868530647977,0.132529768321485,0,0.829288440122964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,7.28427090413901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,16.6943856775742,3.54270550680308,1.56869953835371,1.46139224653261,0.73886140225013,0,0,0,0,0,0,10.7048034678916,9.14183609821597,2.23874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92349595790849,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,10.1701460117107,8.50995654364571,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36607951820676,0.565412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0,0,5.08728009223433,1.94224303627274,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,10.1686719022098,0.801588202515337,0.213452994739353,3.9961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1444506695002,0,0.157204305099666,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9199002125041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0.183428598521679,11.2059896165828,0,0,0,0.150420656698515,0,0,0,0,34.3026120023545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2910686854405,0,0,0.559277158988962,7.85201868921944,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,1.5245859670942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,1.19463369395298,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0.435433495793923,0,0,0.286888821570705,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p8@KLK6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6367 | |||
|TSSclassifier=S | |||
|UniProt=Q92876 | |||
|association_with_transcript=-34bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end | |||
|coexpression_cluster_id=C849 | |||
|description=CAGE_peak_8_at_KLK6_5end | |||
|id=chr19:51472081..51472088,- | |||
|ontology_enrichment_celltype=CL:0000066!2.42e-18!254;CL:1000507!1.59e-14!12;CL:1000494!1.59e-14!12;CL:1000449!1.71e-10!16;CL:0000239!9.89e-10!3;CL:1000615!9.89e-10!3;CL:0002306!9.89e-10!3;CL:1000497!3.74e-09!18;CL:0002518!3.74e-09!18;CL:0002178!4.34e-09!3;CL:0000223!5.47e-08!59;CL:0002076!9.72e-08!43;CL:0000076!3.70e-07!62;CL:0002251!4.32e-07!21;CL:1000415!7.26e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.70e-38;10!CL:1000494;3.70e-38;10!CL:1000449;3.17e-25;15!CL:0000239;8.40e-25;3!CL:1000615;8.40e-25;3!CL:0002306;8.40e-25;3!CL:1000497;3.54e-22;17!CL:0002518;3.54e-22;17!CL:0002681;1.01e-16;12!CL:0002584;1.01e-16;12!CL:0002178;1.32e-11;3!CL:0000083;8.89e-09;4!CL:0000082;5.09e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.70e-38,10;CL:1000494,3.70e-38,10;CL:1000449,3.17e-25,15;CL:0000239,8.07e-25,3;CL:1000615,8.07e-25,3;CL:0002306,8.07e-25,3;CL:1000497,3.54e-22,17;CL:0002518,3.54e-22,17;CL:0002681,1.01e-16,12;CL:0002584,1.01e-16,12;CL:0000066,1.61e-14,253;CL:0002178,1.22e-11,3;CL:0000083,8.21e-09,4;CL:0000082,5.09e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.73e-21!106;DOID:299!3.31e-16!25;DOID:0050687!3.03e-15!143;DOID:1749!5.51e-14!14;DOID:4074!7.06e-07!2;DOID:4905!7.06e-07!2;DOID:3498!7.06e-07!2;DOID:3493!8.85e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.23e-16;2!DOID:4905;1.23e-16;2!DOID:3498;1.23e-16;2!DOID:299;3.59e-15;25!DOID:3111;9.43e-10;1!DOID:3603;9.43e-10;1!DOID:1324;7.31e-09;15!DOID:1793;8.89e-09;4!DOID:0050615;2.57e-08;16!DOID:305;7.99e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.05e-16,2;DOID:4905,1.05e-16,2;DOID:3498,1.05e-16,2;DOID:305,1.63e-16,106;DOID:299,3.44e-15,25;DOID:0050687,1.72e-11,143;DOID:3111,9.44e-10,1;DOID:3603,9.44e-10,1;DOID:1324,7.31e-09,15;DOID:1793,8.21e-09,4;DOID:0050615,2.57e-08,16;DOID:162,9.27e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.59e-14!12;UBERON:0001231!1.59e-14!12;UBERON:0004810!1.59e-14!12;UBERON:0003886!6.13e-14!63;UBERON:0000464!2.14e-13!104;UBERON:0000466!8.22e-13!126;UBERON:0002553!5.39e-12!70;UBERON:0000058!3.45e-11!26;UBERON:0004211!1.71e-10!16;UBERON:0001285!1.71e-10!16;UBERON:0007684!1.71e-10!16;UBERON:0003220!1.71e-10!16;UBERON:0004208!1.71e-10!16;UBERON:0002294!8.21e-10!7;UBERON:0001173!8.21e-10!7;UBERON:0004912!8.21e-10!7;UBERON:0006555!8.76e-10!17;UBERON:0005103!8.76e-10!17;UBERON:0000083!8.76e-10!17;UBERON:0009201!8.76e-10!17;UBERON:0004819!8.76e-10!17;UBERON:0006553!8.76e-10!17;UBERON:0003074!8.76e-10!17;UBERON:0003060!8.76e-10!17;UBERON:0006853!9.89e-10!3;UBERON:0007685!9.89e-10!3;UBERON:0004134!9.89e-10!3;UBERON:0005177!1.03e-09!107;UBERON:0000080!3.74e-09!18;UBERON:0002120!3.74e-09!18;UBERON:0004875!3.74e-09!18;UBERON:0005721!3.74e-09!18;UBERON:0005754!3.74e-09!18;UBERON:0007297!3.74e-09!18;UBERON:0002110!4.11e-09!3;UBERON:0006242!4.11e-09!3;UBERON:0003064!3.24e-08!37;UBERON:0004876!4.38e-08!20;UBERON:0000344!1.08e-07!12;UBERON:0003887!1.26e-07!21;UBERON:0001007!4.60e-07!155;UBERON:0001555!4.60e-07!155;UBERON:0007026!4.60e-07!155;UBERON:0002113!4.91e-07!27;UBERON:0003918!4.91e-07!27;UBERON:0005095!4.91e-07!27;UBERON:0007687!4.91e-07!27;UBERON:0002323!5.68e-07!46;UBERON:0000489!7.07e-07!32;UBERON:0003343!7.30e-07!4;UBERON:0004785!7.30e-07!4;UBERON:0005172!7.34e-07!55;UBERON:0005173!7.34e-07!55 | |||
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|short_description=p8@KLK6 | |||
}} |
Revision as of 22:01, 11 September 2013
Short description: | p8@KLK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_KLK6_5end |
Coexpression cluster: | C849_papillotubular_lung_mucinous_oral_Renal_clear_gall |
Association with transcript: | -34bp_to_ENST00000376851, ENST00000391808, NM_001012964, NM_001012965, uc002pui.2, uc002puj.2, uc010ycn.1_5end |
EntrezGene: | KLK6 |
HGNC: | 6367 |
UniProt: | Q92876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.70e-38 | 10 |
nephron tubule epithelial cell | 3.70e-38 | 10 |
epithelial cell of nephron | 3.17e-25 | 15 |
brush border epithelial cell | 8.07e-25 | 3 |
kidney cortex tubule cell | 8.07e-25 | 3 |
epithelial cell of proximal tubule | 8.07e-25 | 3 |
kidney cell | 3.54e-22 | 17 |
kidney epithelial cell | 3.54e-22 | 17 |
kidney cortical cell | 1.01e-16 | 12 |
renal cortical epithelial cell | 1.01e-16 | 12 |
epithelial cell | 1.61e-14 | 253 |
epithelial cell of stomach | 1.22e-11 | 3 |
epithelial cell of pancreas | 8.21e-09 | 4 |
epithelial cell of lung | 5.09e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.05e-16 | 2 |
pancreatic carcinoma | 1.05e-16 | 2 |
pancreatic ductal adenocarcinoma | 1.05e-16 | 2 |
carcinoma | 1.63e-16 | 106 |
adenocarcinoma | 3.44e-15 | 25 |
cell type cancer | 1.72e-11 | 143 |
cystadenocarcinoma | 9.44e-10 | 1 |
mucinous cystadenocarcinoma | 9.44e-10 | 1 |
lung cancer | 7.31e-09 | 15 |
pancreatic cancer | 8.21e-09 | 4 |
respiratory system cancer | 2.57e-08 | 16 |
cancer | 9.27e-07 | 235 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.