Personal tools

Browse NonredundantMotifs: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 101: Line 101:
|?=Logo
|?=Logo
|format=ttable
|format=ttable
|class=known_motif_list
|class=known_motif_list2
|offset=0
|offset=0
|limit=1000
|limit=1000
Line 114: Line 114:
|?=Logo
|?=Logo
|format=ttable
|format=ttable
|class=known_motif_list2
|class=known_motif_list
|limit=1000
|limit=1000
|mainlabel=name
|mainlabel=name
}}
}}

Revision as of 13:58, 2 May 2013

motif dbmotif idmotif namescore
Lhx8_2247.2
ZEB1.p2
Sp4_secondary
Cphx_3484.1
Tcfap2c_secondary
TLX1_f1
CDX1,2,4.p2
ZBTB6.p2
E2F2_secondary
SPZ1.p2
SPZ1_f1
MA0065.2
Gata6_secondary
PBX1_MCF7-PBX1-ChIP-Seq(GSE28007)
SMAD1_si
Rhox11_2205.1
ZBTB33_GM12878-ZBTB33-ChIP-Seq
MAZ_f1
CDC5L.p2
ZBT7B_si
POU6F1.p2
KLF15_f1
MBD2_si
Gcm1_primary
EWSR1-FLI1.p2
MSX1,2.p2
ARID5B.p2
Osr1_secondary
Osr1_primary
Sp100_primary
ZNF263_K562-Znf263-ChIP-Seq
EN1,2.p2
STAT1_HelaS3-STAT1-ChIP-Seq
SOX17_f2
Isgf3g_secondary
Sox7_secondary
Zbtb12_secondary
FUBP1_f1
DMC1_Testis-DMC1-ChIP-Seq
HMX1.p2
IRF5_f1
EOMES_f1
IRC900814_secondary
CDX2_mES-Cdx2-ChIP-Seq
Zfp187_primary
HXD10_f1
POU3F1..4.p2
EBNA1_Raji-EBNA1-ChIP-Seq(GSE30709)
Sox15_secondary
Arid5a_secondary
Gabpa_secondary
ZN350_f1
Irf3_secondary
Zbtb3_secondary
STAT2_f1
HOX(A5,B5).p2
MCR_f1
ZBTB4!METH_f1
TAL1_motifB
MYBB_f1
FOXC2_f1
EPAS1_si
Homez_1063.2
Sox5_secondary
PURA_f1
CEBPB_f1
TEF_f1
Tcf3_secondary
Zfp410_primary
HXA7_f1
ZBT7A_f1
ATF5_si
TEAD4_f1
FOXP3.p2
Zfp187_secondary
MA0035.2
MA0164.1
Zfp161_secondary
GZF1.p2
Zbtb3_primary
PAX2_f1
PAX8.p2
Rxra_secondary
NR2E3_f1
PAX8_f1
PRDM14_H1-PRDM14-ChIP-Seq
NHLH1,2.p2
GTF2A1,2.p2
PAX5_si
Arid3a_secondary
PROP1_f1
PTF1A_f1
TGIF1_f1
ALX1_si
ZEP2_si
HXD13_f1
LEF1_f1
AIRE.p2
HLTF_f1
HESX1_f1
BHE41_f1
NANOG(mouse).p2
Zfp105_secondary
MLXPL_f1
ZBTB16.p2
BRAC_si
Glis2_secondary
MA0080.2
CREB1_f1
ZBTB4_si
ALX1.p2
Sp100_secondary
ARI3A_do
Arid5a_primary
HMGA2_f1
PAX3_Rh4-PAX3
Gcm1_secondary
Atf1_secondary
E2F6_f1
Rara_secondary
MA0003.1
ZEB1_do
TGIF1_si
NKX25_f1
RELA_GM12787-p65-ChIP-Seq
MYBL2_Hela-BMYB-ChIPSeq(GSE27030)
GCR_do
HIF1A_si
ZN219_f1
NFYB_f1
POU5F1_mES-Oct4-ChIP-Seq
KLF4_f2
NFATC1..3.p2
ZIC1_f1
RARA_f1
NFE2L1.p2
MA0112.2
RFX1..5_RFXANK_RFXAP.p2
FOXO1_si
SMAD3_f1
RUNX1_Jurkat-RUNX1-ChIP-Seq
Sry_primary
ZNF143.p2
TP53.p2
MAFB.p2
BPTF.p2
NANOG_mES-Nanog-ChIP-Seq
MA0108.2
Six6_2267.5
SOX5.p2
MEF2D_f1
GFI1.p2
PAX5.p2
SRF_do
POU5F1_SOX2(dimer).p2
Zic1_primary
Irx4_2242.3
NKX2-2,8.p2
MZF1.p2
NKX3-1.p2
PPARA_f1
Bbx_primary
CTCF_f2
MTF1_f1
HSF1_f2
HNF1B_f1
ATF6A_si
Hmbox1_2674.1
NFIA+NFIB+NFIC+NFIX_f2
Srf_secondary
MA0090.1
JUN_f1
COE1_f2
Sox8_secondary
KLF8_f1
MA0146.1
SRBP1_f2
RXRA_VDR(dimer).p2
TFCP2_f1
REST_f1
Zfp161_primary
ARNT2_si
OTX2_si
Irf6_secondary
NRF1_f1
Zic2_secondary
RARA_f2
RREB1_si
EVI1.p2
Hic1_secondary
NFIA+NFIB+NFIC+NFIX_si
BRCA1_f1
YY1.p2
HXB6_f1
Sox18_secondary
Rfx3_secondary
Ehf_secondary
HMGA1,2.p2
MA0155.1
PLAG1_f1
MA0068.1
HINFP_f1
Klf7_secondary
POU1F1.p2
motif dbmotif idmotif namescore
UNIPROBELhx8_2247.2CELL080.145
SWISSREGULONZEB1.p2ZEB10.811
UNIPROBESp4_secondarySCI091.18
UNIPROBECphx_3484.1CELL080.0662
UNIPROBETcfap2c_secondarySCI090.931
HOCOMOCOTLX1_f10.119
SWISSREGULONCDX1,2,4.p2CDX1,2,40.0968
SWISSREGULONZBTB6.p2ZBTB60.955
UNIPROBEE2F2_secondarySCI091.877
SWISSREGULONSPZ1.p2SPZ11.293
HOCOMOCOSPZ1_f10.815
JASPARMA0065.2PPARG::RXRA0.403
UNIPROBEGata6_secondarySCI090.906
HOMERPBX1_MCF7-PBX1-ChIP-Seq(GSE28007)0.0635
HOCOMOCOSMAD1_si0.209
UNIPROBERhox11_2205.1CELL080.0179
HOMERZBTB33_GM12878-ZBTB33-ChIP-Seq0.414
HOCOMOCOMAZ_f14.357
SWISSREGULONCDC5L.p2CDC5L0.0474
HOCOMOCOZBT7B_si4.964
SWISSREGULONPOU6F1.p2POU6F10.0332
HOCOMOCOKLF15_f14.5
HOCOMOCOMBD2_si2.962
UNIPROBEGcm1_primarySCI090.518
SWISSREGULONEWSR1-FLI1.p2EWSR1-FLI10.0505
SWISSREGULONMSX1,2.p2MSX1,20.0479
SWISSREGULONARID5B.p2ARID5B0.0544
UNIPROBEOsr1_secondarySCI090.0379
UNIPROBEOsr1_primarySCI090.0404
UNIPROBESp100_primarySCI090.0332
HOMERZNF263_K562-Znf263-ChIP-Seq1.154
SWISSREGULONEN1,2.p2EN1,20.0733
HOMERSTAT1_HelaS3-STAT1-ChIP-Seq0.147
HOCOMOCOSOX17_f20.04
UNIPROBEIsgf3g_secondarySCI090.0255
UNIPROBESox7_secondarySCI090.0146
UNIPROBEZbtb12_secondarySCI090.06
HOCOMOCOFUBP1_f10.218
HOMERDMC1_Testis-DMC1-ChIP-Seq0.0436
SWISSREGULONHMX1.p2HMX10.123
HOCOMOCOIRF5_f10.116
HOCOMOCOEOMES_f10.012
UNIPROBEIRC900814_secondarySCI090.0303
HOMERCDX2_mES-Cdx2-ChIP-Seq0.101
UNIPROBEZfp187_primarySCI090.0513
HOCOMOCOHXD10_f10.0675
SWISSREGULONPOU3F1..4.p2POU3F10.0499
HOMEREBNA1_Raji-EBNA1-ChIP-Seq(GSE30709)0.0362
UNIPROBESox15_secondarySCI090.0175
UNIPROBEArid5a_secondarySCI090.0107
UNIPROBEGabpa_secondarySCI092.566
HOCOMOCOZN350_f12.679
UNIPROBEIrf3_secondarySCI090.341
UNIPROBEZbtb3_secondarySCI090.0699
HOCOMOCOSTAT2_f10.728
SWISSREGULONHOX(A5,B5).p2HOX(A5,B5)1.476
HOCOMOCOMCR_f10.113
HOCOMOCOZBTB4!METH_f11.448
HOMERTAL1_motifBHPC7-Scl-ChIP-Seq0.12
HOCOMOCOMYBB_f10.0171
HOCOMOCOFOXC2_f10.147
HOCOMOCOEPAS1_si0.665
UNIPROBEHomez_1063.2CELL080.0255
UNIPROBESox5_secondarySCI090.0172
HOCOMOCOPURA_f13.94
HOCOMOCOCEBPB_f10.651
HOCOMOCOTEF_f10.0613
UNIPROBETcf3_secondarySCI090.00582
UNIPROBEZfp410_primarySCI090.0497
HOCOMOCOHXA7_f10.0141
HOCOMOCOZBT7A_f13.48
HOCOMOCOATF5_si0.0903
HOCOMOCOTEAD4_f10.0572
SWISSREGULONFOXP3.p2FOXP30.113
UNIPROBEZfp187_secondarySCI090.565
JASPARMA0035.2Gata10.207
JASPARMA0164.1Nr2e30.0473
UNIPROBEZfp161_secondarySCI092.983
SWISSREGULONGZF1.p2GZF10.0278
UNIPROBEZbtb3_primarySCI090.16
HOCOMOCOPAX2_f10.0597
SWISSREGULONPAX8.p2PAX80.116
UNIPROBERxra_secondarySCI090.0814
HOCOMOCONR2E3_f10.112
HOCOMOCOPAX8_f10.143
HOMERPRDM14_H1-PRDM14-ChIP-Seq0.0155
SWISSREGULONNHLH1,2.p2NHLH1,21.43
SWISSREGULONGTF2A1,2.p2GTF2A1,20.07
HOCOMOCOPAX5_si0.0807
UNIPROBEArid3a_secondarySCI090.00803
HOCOMOCOPROP1_f10.0296
HOCOMOCOPTF1A_f10.304
HOCOMOCOTGIF1_f10.146
HOCOMOCOALX1_si0.0736
HOCOMOCOZEP2_si0.458
HOCOMOCOHXD13_f10.027
HOCOMOCOLEF1_f10.165
SWISSREGULONAIRE.p2AIRE0.108
HOCOMOCOHLTF_f10.064
HOCOMOCOHESX1_f10.865
HOCOMOCOBHE41_f12.43
SWISSREGULONNANOG(mouse).p2NANOG(mouse)0.0559
UNIPROBEZfp105_secondarySCI090.0307
HOCOMOCOMLXPL_f10.909
SWISSREGULONZBTB16.p2ZBTB160.194
HOCOMOCOBRAC_si0.0116
UNIPROBEGlis2_secondarySCI090.0207
JASPARMA0080.2SPI12.116
HOCOMOCOCREB1_f10.455
HOCOMOCOZBTB4_si0.621
SWISSREGULONALX1.p2ALX10.049
UNIPROBESp100_secondarySCI090.184
HOCOMOCOARI3A_do0.0743
UNIPROBEArid5a_primarySCI090.0566
HOCOMOCOHMGA2_f10.0213
HOMERPAX3_Rh4-PAX3FKHR-ChIP-Seq0.0402
UNIPROBEGcm1_secondarySCI090.446
UNIPROBEAtf1_secondarySCI090.0583
HOCOMOCOE2F6_f14.312
UNIPROBERara_secondarySCI090.868
JASPARMA0003.1TFAP2A3.387
HOCOMOCOZEB1_do0.791
HOCOMOCOTGIF1_si0.25
HOCOMOCONKX25_f10.15
HOMERRELA_GM12787-p65-ChIP-Seq0.684
HOMERMYBL2_Hela-BMYB-ChIPSeq(GSE27030)0.183
HOCOMOCOGCR_do0.223
HOCOMOCOHIF1A_si0.628
HOCOMOCOZN219_f13.257
HOCOMOCONFYB_f10.742
HOMERPOU5F1_mES-Oct4-ChIP-Seq0.161
HOCOMOCOKLF4_f22.542
SWISSREGULONNFATC1..3.p2NFATC10.173
HOCOMOCOZIC1_f11.743
HOCOMOCORARA_f10.279
SWISSREGULONNFE2L1.p2NFE2L10.552
JASPARMA0112.2ESR10.655
SWISSREGULONRFX1..5_RFXANK_RFXAP.p2RFX10.408
HOCOMOCOFOXO1_si0.207
HOCOMOCOSMAD3_f10.0983
HOMERRUNX1_Jurkat-RUNX1-ChIP-Seq0.527
UNIPROBESry_primarySCI090.0425
SWISSREGULONZNF143.p2ZNF1430.862
SWISSREGULONTP53.p2TP531.033
SWISSREGULONMAFB.p2MAFB0.368
SWISSREGULONBPTF.p2BPTF1.641
HOMERNANOG_mES-Nanog-ChIP-Seq0.0322
JASPARMA0108.2TBP0.123
UNIPROBESix6_2267.5CELL080.0474
SWISSREGULONSOX5.p2SOX50.146
HOCOMOCOMEF2D_f10.11
SWISSREGULONGFI1.p2GFI10.279
SWISSREGULONPAX5.p2PAX54.345
HOCOMOCOSRF_do0.133
SWISSREGULONPOU5F1_SOX2(dimer).p2POU5F1_SOX2(dimer)0.086
UNIPROBEZic1_primarySCI091.931
UNIPROBEIrx4_2242.3CELL080.0662
SWISSREGULONNKX2-2,8.p2NKX2-2,80.107
SWISSREGULONMZF1.p2MZF12.526
SWISSREGULONNKX3-1.p2NKX3-10.0865
HOCOMOCOPPARA_f10.26
UNIPROBEBbx_primarySCI090.0769
HOCOMOCOCTCF_f22.277
HOCOMOCOMTF1_f10.798
HOCOMOCOHSF1_f20.082
HOCOMOCOHNF1B_f10.199
HOCOMOCOATF6A_si0.193
UNIPROBEHmbox1_2674.1CELL080.0453
HOCOMOCONFIA+NFIB+NFIC+NFIX_f20.404
UNIPROBESrf_secondarySCI091.693
JASPARMA0090.1TEAD10.193
HOCOMOCOJUN_f11.959
HOCOMOCOCOE1_f20.372
UNIPROBESox8_secondarySCI090.0533
HOCOMOCOKLF8_f10.816
JASPARMA0146.1Zfx1.377
HOCOMOCOSRBP1_f20.111
SWISSREGULONRXRA_VDR(dimer).p2RXRA_VDR(dimer)0.172
HOCOMOCOTFCP2_f12.03
HOCOMOCOREST_f10.184
UNIPROBEZfp161_primarySCI092.064
HOCOMOCOARNT2_si2.087
HOCOMOCOOTX2_si0.215
UNIPROBEIrf6_secondarySCI091.59
HOCOMOCONRF1_f12.271
UNIPROBEZic2_secondarySCI090.284
HOCOMOCORARA_f20.406
HOCOMOCORREB1_si0.914
SWISSREGULONEVI1.p2EVI10.079
UNIPROBEHic1_secondarySCI090.173
HOCOMOCONFIA+NFIB+NFIC+NFIX_si0.0453
HOCOMOCOBRCA1_f10.0661
SWISSREGULONYY1.p2YY10.0853
HOCOMOCOHXB6_f10.127
UNIPROBESox18_secondarySCI090.0104
UNIPROBERfx3_secondarySCI090.119
UNIPROBEEhf_secondarySCI090.0479
SWISSREGULONHMGA1,2.p2HMGA1,20.218
JASPARMA0155.1INSM11.159
HOCOMOCOPLAG1_f13.725
JASPARMA0068.1Pax40.153
HOCOMOCOHINFP_f10.255
UNIPROBEKlf7_secondarySCI090.331
SWISSREGULONPOU1F1.p2POU1F10.089
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=Browse_NonredundantMotifs&oldid=2578105"