NonredundantMotifs:90

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant90
• db :UNIPROBE
• Id :Sox18_secondary
• name :SCI09
• score :0.010437874414759556
  
• External refs:

EntrezGene:54345
UniProt:54345

• Internal refs:

EntrezGene:54345

Motif matrix

P0 A C G T 1 0.233450161931124 0.135590748126185 0.449351229829624 0.181607860113066 2 0.164158621021835 0.195257256960119 0.355715042107995 0.28486907991005 3 0.366008364849163 0.174902145183285 0.291705061060094 0.167384428907458 4 0.111203865824073 0.386494011729303 0.313801850275578 0.188500272171046 5 0.0377720364100832 0.262982803148603 0.150188960462521 0.549056199978793 6 0.361570043267775 0.0403309702835046 0.45293692438112 0.1451620620676 7 0.644866690990704 0.179213984596252 0.0740700260595928 0.101849298353451 8 0.847542974271445 0.0236931753055282 0.0668939485329133 0.0618699018901137 9 0.0618699018901137 0.0668939485329133 0.0236931753055282 0.847542974271445 10 0.101849298353451 0.0740700260595928 0.179213984596252 0.644866690990704 11 0.1451620620676 0.45293692438112 0.0403309702835046 0.361570043267775 12 0.549056199978793 0.150188960462521 0.262982803148603 0.0377720364100832 13 0.256652811095245 0.170744553271165 0.197090601320515 0.375512034313075 14 0.288178367412808 0.121185313915577 0.335591883029961 0.255044435641654 15 0.284269889440176 0.341601752851283 0.127009156621074 0.247119201087467 16 0.288580448711648 0.309961332453298 0.22276547958401 0.178692739251044