Personal tools

NonredundantMotifs:128

From FANTOM5_SSTAR

Jump to: navigation, search

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant128
  • db :HOMER
  • Id :ZNF263_K562-Znf263-ChIP-Seq
  • name  :
  • score :1.1540519222583132
  • External refs:
EntrezGene:10127
UniProt:10127

  • Internal refs:
EntrezGene:10127


Motif matrix
POACGT
12894786446083675
26340457058842247
39563601256719
419191918984
5199749925419
619189841919
719191918984
819189841919
919189841919
10262812510383865

Sub Motif Members