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NonredundantMotifs:10

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant10
  • db :SWISSREGULON
  • Id :ZEB1.p2
  • name :ZEB1
  • score :0.8111344501518296
  • External refs:
EntrezGene:6935
UniProt:6935

  • Internal refs:
EntrezGene:6935


Motif matrix
POACGT
1131.518756410.442575333.59614300000120.312073
287.985988445.171425129.15353233.558604
3220.41627621.176247636.07900418.19802
41.720719881.6172943.4619669.069568
5859.5135129999990.88074232.9122792.563013
60868.4878596.0678321.313858
72.61893848.46894699999944.781670
801.6779130894.191633999999
92.5435811.621881886.5498049999995.15428
1018.09673206.853461386.397542284.521814
11147.679327130.283902476.031602141.874716
12126.949105512.472689196.80182859.645925

Sub Motif Members