FFCP PHASE1:Hg19::chr19:49222956..49222990,-: Difference between revisions
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|ontology_enrichment_celltype=CL:1000507!2.07e-13!12;CL:1000494!2.07e-13!12;CL:1000449!2.92e-11!16;CL:0000188!7.81e-10!9;CL:1000497!1.11e-09!18;CL:0002518!1.11e-09!18;CL:0002322!8.17e-09!5;CL:0000039!1.82e-07!7;CL:0000586!1.82e-07!7;CL:0002681!2.47e-07!13;CL:0002584!2.47e-07!13 | |ontology_enrichment_celltype=CL:1000507!2.07e-13!12;CL:1000494!2.07e-13!12;CL:1000449!2.92e-11!16;CL:0000188!7.81e-10!9;CL:1000497!1.11e-09!18;CL:0002518!1.11e-09!18;CL:0002322!8.17e-09!5;CL:0000039!1.82e-07!7;CL:0000586!1.82e-07!7;CL:0002681!2.47e-07!13;CL:0002584!2.47e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;9.64e-24;10!CL:1000494;9.64e-24;10!CL:1000449;3.22e-15;15!CL:0002322;1.27e-14;5!CL:1000497;3.24e-13;17!CL:0002518;3.24e-13;17!CL:0000239;6.28e-10;3!CL:1000615;6.28e-10;3!CL:0002306;6.28e-10;3!CL:0002681;1.16e-08;12!CL:0002584;1.16e-08;12!CL:0000123;4.31e-07;2!CL:0000242;4.31e-07;2 | |ontology_enrichment_celltype_v019=CL:1000507;9.64e-24;10!CL:1000494;9.64e-24;10!CL:1000449;3.22e-15;15!CL:0002322;1.27e-14;5!CL:1000497;3.24e-13;17!CL:0002518;3.24e-13;17!CL:0000239;6.28e-10;3!CL:1000615;6.28e-10;3!CL:0002306;6.28e-10;3!CL:0002681;1.16e-08;12!CL:0002584;1.16e-08;12!CL:0000123;4.31e-07;2!CL:0000242;4.31e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.90e-24,10;CL:1000494,7.90e-24,10;CL:1000449,2.83e-15,15;CL:0002322,1.20e-14,5;CL:1000497,2.90e-13,17;CL:0002518,2.90e-13,17;CL:0000239,6.11e-10,3;CL:1000615,6.11e-10,3;CL:0002306,6.11e-10,3;CL:0002681,1.11e-08,12;CL:0002584,1.11e-08,12;CL:0000242,4.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.54e-07;10!UBERON:0005564;5.54e-07;10 | |ontology_enrichment_development_v019=UBERON:0009117;5.54e-07;10!UBERON:0005564;5.54e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@MAMSTR | |short_description=p2@MAMSTR | ||
}} | }} |
Revision as of 22:22, 19 November 2012
Short description: | p2@MAMSTR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MAMSTR_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 0bp_to_ENST00000318083, ENST00000377367, ENST00000419611, NM_001130915, uc002pkg.2_5end |
EntrezGene: | MAMSTR |
HGNC: | 26689 |
UniProt: | Q6ZN01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.90e-24 | 10 |
nephron tubule epithelial cell | 7.90e-24 | 10 |
epithelial cell of nephron | 2.83e-15 | 15 |
embryonic stem cell | 1.20e-14 | 5 |
kidney cell | 2.90e-13 | 17 |
kidney epithelial cell | 2.90e-13 | 17 |
brush border epithelial cell | 6.11e-10 | 3 |
kidney cortex tubule cell | 6.11e-10 | 3 |
epithelial cell of proximal tubule | 6.11e-10 | 3 |
kidney cortical cell | 1.11e-08 | 12 |
renal cortical epithelial cell | 1.11e-08 | 12 |
Merkel cell | 4.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 7.90e-24 | 10 |
excretory tube | 1.65e-17 | 16 |
kidney epithelium | 1.65e-17 | 16 |
nephron epithelium | 2.83e-15 | 15 |
renal tubule | 2.83e-15 | 15 |
nephron tubule | 2.83e-15 | 15 |
nephron | 2.83e-15 | 15 |
uriniferous tubule | 2.83e-15 | 15 |
nephrogenic mesenchyme | 2.83e-15 | 15 |
kidney | 1.91e-14 | 26 |
kidney mesenchyme | 1.91e-14 | 26 |
upper urinary tract | 1.91e-14 | 26 |
kidney rudiment | 1.91e-14 | 26 |
kidney field | 1.91e-14 | 26 |
abdomen element | 5.58e-14 | 54 |
abdominal segment element | 5.58e-14 | 54 |
abdominal segment of trunk | 3.95e-12 | 60 |
abdomen | 3.95e-12 | 60 |
cavitated compound organ | 1.13e-11 | 31 |
renal cortex tubule | 6.11e-10 | 3 |
region of nephron tubule | 6.11e-10 | 3 |
proximal tubule | 6.11e-10 | 3 |
cortex | 3.11e-09 | 15 |
male reproductive organ | 4.54e-09 | 11 |
cortex of kidney | 1.11e-08 | 12 |
renal parenchyma | 1.11e-08 | 12 |
trunk region element | 4.24e-08 | 101 |
muscle structure | 6.91e-08 | 2 |
muscle organ | 6.91e-08 | 2 |
throat | 9.26e-08 | 2 |
compound organ | 1.08e-07 | 68 |
pituitary gland | 3.82e-07 | 2 |
urinary system structure | 8.19e-07 | 47 |
parenchyma | 8.44e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.