FFCP PHASE1:Mm9::chr14:47896665..47896684,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr14:47896665..47896684,+ | |id=chr14:47896665..47896684,+ | ||
|ontology_enrichment_celltype=CL:0000063!4.53e-10!66;CL:0002076!8.77e-08!15;CL:0000838!2.36e-07!12;CL:0000066!4.67e-07!25;CL:0000542!6.46e-07!13;CL:0000051!6.46e-07!13;CL:0000084!8.72e-07!11;CL:0000827!8.72e-07!11 | |ontology_enrichment_celltype=CL:0000063!4.53e-10!66;CL:0002076!8.77e-08!15;CL:0000838!2.36e-07!12;CL:0000066!4.67e-07!25;CL:0000542!6.46e-07!13;CL:0000051!6.46e-07!13;CL:0000084!8.72e-07!11;CL:0000827!8.72e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.77e-08,15;CL:0000838,2.36e-07,12;CL:0000066,4.67e-07,25;CL:0000542,6.46e-07,13;CL:0000051,6.46e-07,13;CL:0000084,8.72e-07,11;CL:0000827,8.72e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.18e-20!128;UBERON:0001555!1.18e-20!128;UBERON:0007026!1.18e-20!128;UBERON:0004119!7.05e-20!130;UBERON:0000925!7.05e-20!130;UBERON:0006595!7.05e-20!130;UBERON:0004921!1.19e-19!126;UBERON:0004185!1.19e-19!126;UBERON:0000160!5.90e-13!43;UBERON:0005409!1.03e-12!59;UBERON:0002370!1.66e-11!23;UBERON:0000974!1.66e-11!23;UBERON:0004807!1.66e-11!23;UBERON:0005058!1.66e-11!23;UBERON:0003351!1.66e-11!23;UBERON:0009113!1.66e-11!23;UBERON:0003295!1.66e-11!23;UBERON:0009722!1.66e-11!23;UBERON:0005562!1.66e-11!23;UBERON:0007690!1.66e-11!23;UBERON:0003408!7.25e-11!24;UBERON:0005911!8.52e-11!69;UBERON:0004177!9.14e-11!29;UBERON:0003929!1.07e-10!55;UBERON:0006562!1.81e-10!24;UBERON:0001557!1.81e-10!24;UBERON:0001042!1.81e-10!24;UBERON:0008814!1.81e-10!24;UBERON:0009145!1.81e-10!24;UBERON:0000072!2.05e-10!27;UBERON:0000490!2.87e-10!66;UBERON:0000065!1.71e-09!41;UBERON:0001041!2.24e-09!92;UBERON:0001004!3.78e-09!42;UBERON:0000344!4.76e-09!15;UBERON:0002193!5.43e-09!48;UBERON:0001242!3.37e-08!13;UBERON:0000060!3.37e-08!13;UBERON:0001262!3.37e-08!13;UBERON:0004786!3.37e-08!13;UBERON:0000077!7.67e-08!97;UBERON:0002390!9.73e-08!45;UBERON:0003061!9.73e-08!45;UBERON:0005057!1.85e-07!51;UBERON:0002405!2.83e-07!70;UBERON:0000063!8.09e-07!35;UBERON:0004923!8.76e-07!24 | |ontology_enrichment_uberon=UBERON:0001007!1.18e-20!128;UBERON:0001555!1.18e-20!128;UBERON:0007026!1.18e-20!128;UBERON:0004119!7.05e-20!130;UBERON:0000925!7.05e-20!130;UBERON:0006595!7.05e-20!130;UBERON:0004921!1.19e-19!126;UBERON:0004185!1.19e-19!126;UBERON:0000160!5.90e-13!43;UBERON:0005409!1.03e-12!59;UBERON:0002370!1.66e-11!23;UBERON:0000974!1.66e-11!23;UBERON:0004807!1.66e-11!23;UBERON:0005058!1.66e-11!23;UBERON:0003351!1.66e-11!23;UBERON:0009113!1.66e-11!23;UBERON:0003295!1.66e-11!23;UBERON:0009722!1.66e-11!23;UBERON:0005562!1.66e-11!23;UBERON:0007690!1.66e-11!23;UBERON:0003408!7.25e-11!24;UBERON:0005911!8.52e-11!69;UBERON:0004177!9.14e-11!29;UBERON:0003929!1.07e-10!55;UBERON:0006562!1.81e-10!24;UBERON:0001557!1.81e-10!24;UBERON:0001042!1.81e-10!24;UBERON:0008814!1.81e-10!24;UBERON:0009145!1.81e-10!24;UBERON:0000072!2.05e-10!27;UBERON:0000490!2.87e-10!66;UBERON:0000065!1.71e-09!41;UBERON:0001041!2.24e-09!92;UBERON:0001004!3.78e-09!42;UBERON:0000344!4.76e-09!15;UBERON:0002193!5.43e-09!48;UBERON:0001242!3.37e-08!13;UBERON:0000060!3.37e-08!13;UBERON:0001262!3.37e-08!13;UBERON:0004786!3.37e-08!13;UBERON:0000077!7.67e-08!97;UBERON:0002390!9.73e-08!45;UBERON:0003061!9.73e-08!45;UBERON:0005057!1.85e-07!51;UBERON:0002405!2.83e-07!70;UBERON:0000063!8.09e-07!35;UBERON:0004923!8.76e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.70e-18,116;UBERON:0001555,1.70e-18,116;UBERON:0007026,1.70e-18,116;UBERON:0004119,9.95e-18,118;UBERON:0000925,9.95e-18,118;UBERON:0006595,9.95e-18,118;UBERON:0004921,1.52e-17,114;UBERON:0000160,2.94e-12,31;UBERON:0002370,1.66e-11,23;UBERON:0000974,1.66e-11,23;UBERON:0004807,1.66e-11,23;UBERON:0005058,1.66e-11,23;UBERON:0003351,1.66e-11,23;UBERON:0009113,1.66e-11,23;UBERON:0003295,1.66e-11,23;UBERON:0009722,1.66e-11,23;UBERON:0005562,1.66e-11,23;UBERON:0007690,1.66e-11,23;UBERON:0005409,1.82e-11,47;UBERON:0003408,7.24e-11,24;UBERON:0005911,8.52e-11,69;UBERON:0004177,9.13e-11,29;UBERON:0005057,9.13e-11,29;UBERON:0003929,1.07e-10,55;UBERON:0006562,1.80e-10,24;UBERON:0001557,1.80e-10,24;UBERON:0001042,1.80e-10,24;UBERON:0008814,1.80e-10,24;UBERON:0009145,1.80e-10,24;UBERON:0000072,2.05e-10,27;UBERON:0000490,2.87e-10,66;UBERON:0000065,1.71e-09,41;UBERON:0001004,3.78e-09,42;UBERON:0000344,4.76e-09,15;UBERON:0002193,5.41e-09,48;UBERON:0002405,5.41e-09,48;UBERON:0001242,3.37e-08,13;UBERON:0001262,3.37e-08,13;UBERON:0004786,3.37e-08,13;UBERON:0000077,5.72e-08,35;UBERON:0001041,7.03e-08,80;UBERON:0002390,9.69e-08,45;UBERON:0003061,9.69e-08,45;UBERON:0004923,8.76e-07,24 | |||
|phase1_expression=4.32401887182944,32.4547129104606,38.6749353481106,28.7341000741489,29.5528480668345,18.8024784541317,12.1478573109673,15.236552166106,15.20518199238,14.7460651582856,14.2110913627169,15.4757988450953,16.606470803327,12.8507991555926,9.66018309265422,8.09901069559304,5.59649502502517,12.7762176970086,14.9454732630255,14.8536378129311,3.40173160604279,10.2269679736912,8.61959304158487,13.5993559374396,10.782236210157,21.8208146363708,21.5380998079537,15.513928753384,9.69119439227507,15.3738379153558,11.5299865540758,6.98533740805594,4.30545351309199,15.8481681015439,10.9763615505484,8.6442015586416,11.2293145944303,7.53356935326434,11.720030167857,6.80580867165938,11.1763982725893,8.19654581950135,12.62326917881,6.04304726282771,4.8660926985367,6.60768307782054,3.9119567217402,2.61630187656536,2.63623419281366,3.30530828426282,1.95980990275508,1.43752564364972,15.4359997573117,13.0565185562042,14.7881271622684,4.88792928468299,5.44413535883638,3.6097046459421,4.04632921719196,3.1739458756322,5.70448263155561,3.04960078862219,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,2.39680088414724,0.768436610643109,3.21437798156281,2.70011876663381,2.10324961351382,1.42825492201902,1.32521124570968,2.69479758272899,3.25874601462004,0.919218786610021,1.10115880999389,2.042997409363,1.99688493233117,3.56092976871523,3.47653045689157,4.68822033501084,0.558365998002762,0.56276261003168,1.22238598221448,2.35702868378934,2.70506193518296,4.28718725398191,7.72407171998477,5.66786700800891,11.0148505706638,7.74381489283248,4.75979933595425,2.69851595818909,3.24888208723835,7.16843019355737,6.17955448579708,8.18065548374677,6.49465011507172,6.36011234118612,4.64783285263046,17.9657068380045,15.2883143823987,21.3320010945999,7.14420435337007,7.60079596425296,5.05524445014783,10.5049169341535,16.0541487861246,3.41416919849097,3.99016251562112,2.13125834818499,4.38169444786511,3.91878865436819,4.70354828542819,4.90099706185734,5.43828929015623,6.2177723475562,3.5384422077995,4.04417124868523,5.30019644304944,4.84875253135222,9.31958806090611,4.09893115816166,1.67557365450764,12.7728527604296,9.58520996047362,5.39912457894067,9.14905634926066,1.19832511523858,0,2.63874139437015,1.73824320192276,2.55715457330331,0.83115217823824,2.10913641988085,3.86989582631202,5.10068579501381,2.52722758433675,3.36706969418358,4.81445638962004,4.36813998423599,6.12211241338187,4.52114453507145,4.35433594568498,6.27757229395764,4.02917415606834,2.32833033665114,3.23351989399263,5.67318240503458,5.98233822157426,2.41115305670332,5.28289773528636,4.87553033131033,3.70407845534298,2.9855140022774,6.31991868581911,4.88961023517959,7.38825098428541,3.72826390563903,3.98694301967864,4.14142741360334,2.84093682702252,3.93528463494808,4.01094493507183,1.86027155800326,4.56064782379353,2.56883753207773,2.79751744852917,4.59668899421467,2.67527071501324,2.04679982395465,2.41505126820156,3.22095405024892,1.26173969138476,3.08713837137853,18.8338706300765,14.5447811664949,5.11891801284562,3.94802342162745,7.47431275668141,10.2858597557905,8.00560957841533,7.22857379227725,9.49058123089023,9.38784041926862,7.79139147280835,8.55512829776949,8.38345574612217,10.7858329038507,10.3746263939853,11.948476395262,2.46568271239006,5.9409226557059,7.88954149711563,8.14605311381257,4.65485969202302,5.04977903210294,6.45012678667424,7.0852871030209,4.70996183524124,4.31890073726302,8.00422093135302,6.50695912292767,4.12773889737726,4.72210436008193,7.1001042485976,7.71766911207734,5.85639459097266,5.17853047411459,5.18832725680113,3.84385978463314,1.43768206527355,4.46569137202204,3.43241440426017,5.05157755894223,6.45830688678884,5.78932225636041,5.72734889516475,5.30575952957357,4.88894929326078,4.58311731593008,6.80601720036656,7.03526281255626,5.95109102215034,8.00047956216975,5.83250033192907,5.3151525515706,3.98636921643718,6.882259218061,6.21665934717224,7.23245292907558,6.03165135757089,1.08781136763742,3.44234991113325,5.24279817978992,0.80275294993896,2.81308047821288,3.11476396215683,3.28212205365685,5.04813151066011,4.68526493155966,7.53981892064796,5.25731355495614,6.23836287430704,5.94460714656548,7.2865926301481,5.55286130031493,3.95287777946523,1.28528526568723,4.5420827266646,1.78065603667255,3.74640006513225,3.95928295134085,7.96470830039777,5.09839335925461,7.25576536715402,7.54420319023592,4.72483028609236,4.30409207121498,4.9101375701962,7.27067458955011,9.26893183800275,8.84902922220285,8.4334886859999,12.3762651897824,4.76615448055303,5.221771726908,1.16422815404479,4.07240366560025,3.19212420556092,3.0322698992352,4.11372551505302,0.913394847343798,3.52007562095566,4.02480934641258,1.54369878638473,5.60613260001032,5.8127193610526,6.63442174209714,5.37175548014114,7.38634048852776,13.4081184849731,2.41052892613663,8.88528580148834,3.714963623338,6.2966139305702,4.1441060541032,7.79157098009843,7.54967971581525,8.32894306969891,9.6566502103324,9.67399816630967,4.77335309007557,3.47969592939249,6.09958401380546,6.91234181259528,7.52717865652087,6.33251434863915,5.12484516262319,6.36431609085087,6.02038666563268,9.20266310371729,4.34937519160848,1.12738587736838,3.13984746692355,3.30916980914195,2.91676782516071,3.61647505737647,3.8859908862879,3.52071715937262,5.4685841634459,5.34782656571125,4.1069300540421,4.03242008761012,18.0126338758062,3.64905387522296,5.6491026440655,7.9251702016455,11.8157619140538,14.5037388990323,13.9426721443164,13.7351260272357,13.5295042930518,15.469981750965,14.9222754002524,20.076323432389,18.2802499116626,20.9209654905008,2.94749498699775,4.43971906748129,7.08739467214858,5.54019234001459,2.12508553435409,5.44279178808428,6.95976172215607,4.93047271881851,3.51100472824754,1.6942555278512,0.920650473014354,2.29158205375759,1.3748254587495,1.37016503954128,0.755393897389701,2.02506750069542,0.45032120322422,1.35942722695261,1.55328093525546,7.78405106881325,5.1873233542134,3.92687293234509,4.61902762429759,6.49800804146745,5.33146174505041,4.22268782823069,2.26638562962784,5.77654577265267,5.55933865880354,6.59046179714623,5.47016390019621,5.05664140337365,5.25006249719928,5.97328877138378,5.23923060411381,6.14186927507734,4.43691207066522,6.1812885120496,5.2991611248383,4.11443102862498,5.32427418478012,4.5302876089991,4.21504608233753,5.64656282491984,6.09225176820071,4.57319932181931,3.15683653725411,5.97538100921792,3.36685362994643,4.98267076121531,4.92522411877817,7.7753898202241,5.73266312388074,5.78719832943424,3.74715866906919,4.44470056046276,5.37177635120746,3.44318997723918,2.8676884485537,4.17362104116759 | |phase1_expression=4.32401887182944,32.4547129104606,38.6749353481106,28.7341000741489,29.5528480668345,18.8024784541317,12.1478573109673,15.236552166106,15.20518199238,14.7460651582856,14.2110913627169,15.4757988450953,16.606470803327,12.8507991555926,9.66018309265422,8.09901069559304,5.59649502502517,12.7762176970086,14.9454732630255,14.8536378129311,3.40173160604279,10.2269679736912,8.61959304158487,13.5993559374396,10.782236210157,21.8208146363708,21.5380998079537,15.513928753384,9.69119439227507,15.3738379153558,11.5299865540758,6.98533740805594,4.30545351309199,15.8481681015439,10.9763615505484,8.6442015586416,11.2293145944303,7.53356935326434,11.720030167857,6.80580867165938,11.1763982725893,8.19654581950135,12.62326917881,6.04304726282771,4.8660926985367,6.60768307782054,3.9119567217402,2.61630187656536,2.63623419281366,3.30530828426282,1.95980990275508,1.43752564364972,15.4359997573117,13.0565185562042,14.7881271622684,4.88792928468299,5.44413535883638,3.6097046459421,4.04632921719196,3.1739458756322,5.70448263155561,3.04960078862219,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,2.39680088414724,0.768436610643109,3.21437798156281,2.70011876663381,2.10324961351382,1.42825492201902,1.32521124570968,2.69479758272899,3.25874601462004,0.919218786610021,1.10115880999389,2.042997409363,1.99688493233117,3.56092976871523,3.47653045689157,4.68822033501084,0.558365998002762,0.56276261003168,1.22238598221448,2.35702868378934,2.70506193518296,4.28718725398191,7.72407171998477,5.66786700800891,11.0148505706638,7.74381489283248,4.75979933595425,2.69851595818909,3.24888208723835,7.16843019355737,6.17955448579708,8.18065548374677,6.49465011507172,6.36011234118612,4.64783285263046,17.9657068380045,15.2883143823987,21.3320010945999,7.14420435337007,7.60079596425296,5.05524445014783,10.5049169341535,16.0541487861246,3.41416919849097,3.99016251562112,2.13125834818499,4.38169444786511,3.91878865436819,4.70354828542819,4.90099706185734,5.43828929015623,6.2177723475562,3.5384422077995,4.04417124868523,5.30019644304944,4.84875253135222,9.31958806090611,4.09893115816166,1.67557365450764,12.7728527604296,9.58520996047362,5.39912457894067,9.14905634926066,1.19832511523858,0,2.63874139437015,1.73824320192276,2.55715457330331,0.83115217823824,2.10913641988085,3.86989582631202,5.10068579501381,2.52722758433675,3.36706969418358,4.81445638962004,4.36813998423599,6.12211241338187,4.52114453507145,4.35433594568498,6.27757229395764,4.02917415606834,2.32833033665114,3.23351989399263,5.67318240503458,5.98233822157426,2.41115305670332,5.28289773528636,4.87553033131033,3.70407845534298,2.9855140022774,6.31991868581911,4.88961023517959,7.38825098428541,3.72826390563903,3.98694301967864,4.14142741360334,2.84093682702252,3.93528463494808,4.01094493507183,1.86027155800326,4.56064782379353,2.56883753207773,2.79751744852917,4.59668899421467,2.67527071501324,2.04679982395465,2.41505126820156,3.22095405024892,1.26173969138476,3.08713837137853,18.8338706300765,14.5447811664949,5.11891801284562,3.94802342162745,7.47431275668141,10.2858597557905,8.00560957841533,7.22857379227725,9.49058123089023,9.38784041926862,7.79139147280835,8.55512829776949,8.38345574612217,10.7858329038507,10.3746263939853,11.948476395262,2.46568271239006,5.9409226557059,7.88954149711563,8.14605311381257,4.65485969202302,5.04977903210294,6.45012678667424,7.0852871030209,4.70996183524124,4.31890073726302,8.00422093135302,6.50695912292767,4.12773889737726,4.72210436008193,7.1001042485976,7.71766911207734,5.85639459097266,5.17853047411459,5.18832725680113,3.84385978463314,1.43768206527355,4.46569137202204,3.43241440426017,5.05157755894223,6.45830688678884,5.78932225636041,5.72734889516475,5.30575952957357,4.88894929326078,4.58311731593008,6.80601720036656,7.03526281255626,5.95109102215034,8.00047956216975,5.83250033192907,5.3151525515706,3.98636921643718,6.882259218061,6.21665934717224,7.23245292907558,6.03165135757089,1.08781136763742,3.44234991113325,5.24279817978992,0.80275294993896,2.81308047821288,3.11476396215683,3.28212205365685,5.04813151066011,4.68526493155966,7.53981892064796,5.25731355495614,6.23836287430704,5.94460714656548,7.2865926301481,5.55286130031493,3.95287777946523,1.28528526568723,4.5420827266646,1.78065603667255,3.74640006513225,3.95928295134085,7.96470830039777,5.09839335925461,7.25576536715402,7.54420319023592,4.72483028609236,4.30409207121498,4.9101375701962,7.27067458955011,9.26893183800275,8.84902922220285,8.4334886859999,12.3762651897824,4.76615448055303,5.221771726908,1.16422815404479,4.07240366560025,3.19212420556092,3.0322698992352,4.11372551505302,0.913394847343798,3.52007562095566,4.02480934641258,1.54369878638473,5.60613260001032,5.8127193610526,6.63442174209714,5.37175548014114,7.38634048852776,13.4081184849731,2.41052892613663,8.88528580148834,3.714963623338,6.2966139305702,4.1441060541032,7.79157098009843,7.54967971581525,8.32894306969891,9.6566502103324,9.67399816630967,4.77335309007557,3.47969592939249,6.09958401380546,6.91234181259528,7.52717865652087,6.33251434863915,5.12484516262319,6.36431609085087,6.02038666563268,9.20266310371729,4.34937519160848,1.12738587736838,3.13984746692355,3.30916980914195,2.91676782516071,3.61647505737647,3.8859908862879,3.52071715937262,5.4685841634459,5.34782656571125,4.1069300540421,4.03242008761012,18.0126338758062,3.64905387522296,5.6491026440655,7.9251702016455,11.8157619140538,14.5037388990323,13.9426721443164,13.7351260272357,13.5295042930518,15.469981750965,14.9222754002524,20.076323432389,18.2802499116626,20.9209654905008,2.94749498699775,4.43971906748129,7.08739467214858,5.54019234001459,2.12508553435409,5.44279178808428,6.95976172215607,4.93047271881851,3.51100472824754,1.6942555278512,0.920650473014354,2.29158205375759,1.3748254587495,1.37016503954128,0.755393897389701,2.02506750069542,0.45032120322422,1.35942722695261,1.55328093525546,7.78405106881325,5.1873233542134,3.92687293234509,4.61902762429759,6.49800804146745,5.33146174505041,4.22268782823069,2.26638562962784,5.77654577265267,5.55933865880354,6.59046179714623,5.47016390019621,5.05664140337365,5.25006249719928,5.97328877138378,5.23923060411381,6.14186927507734,4.43691207066522,6.1812885120496,5.2991611248383,4.11443102862498,5.32427418478012,4.5302876089991,4.21504608233753,5.64656282491984,6.09225176820071,4.57319932181931,3.15683653725411,5.97538100921792,3.36685362994643,4.98267076121531,4.92522411877817,7.7753898202241,5.73266312388074,5.78719832943424,3.74715866906919,4.44470056046276,5.37177635120746,3.44318997723918,2.8676884485537,4.17362104116759 | ||
|short_description=p2@Socs4 | |short_description=p2@Socs4 | ||
}} | }} |
Revision as of 14:59, 14 November 2012
Short description: | p2@Socs4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Socs4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1230 |
Association with transcript: | 59bp_to_ENSMUST00000065562_5end |
EntrezGene: | Socs4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.77e-08 | 15 |
lymphoid lineage restricted progenitor cell | 2.36e-07 | 12 |
epithelial cell | 4.67e-07 | 25 |
lymphocyte | 6.46e-07 | 13 |
common lymphoid progenitor | 6.46e-07 | 13 |
T cell | 8.72e-07 | 11 |
pro-T cell | 8.72e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.