FF:10857-111G2: Difference between revisions

Revision as of 20:08, 9 July 2012

Name:	mesothelioma cell line:No36
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	mesothelium
dev stage	NA
sex	male
age	unknown
cell type	mesothelial cell
cell line	No36
company	ECACC
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.285
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.501
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.129
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.03
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.198
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.166
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.00714
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.00722
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.359
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.595
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.129
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.129
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13074

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.365
MA0003.1	MA0003.1	0.272
MA0004.1	MA0004.1	0.0022
MA0006.1	MA0006.1	0.945
MA0007.1	MA0007.1	0.292
MA0009.1	MA0009.1	0.595
MA0014.1	MA0014.1	0.497
MA0017.1	MA0017.1	0.981
MA0018.2	MA0018.2	0.00768
MA0019.1	MA0019.1	0.911
MA0024.1	MA0024.1	7.07753e-5
MA0025.1	MA0025.1	0.693
MA0027.1	MA0027.1	0.0724
MA0028.1	MA0028.1	4.76176e-6
MA0029.1	MA0029.1	0.187
MA0030.1	MA0030.1	0.0717
MA0031.1	MA0031.1	0.00277
MA0035.2	MA0035.2	0.0653
MA0038.1	MA0038.1	0.193
MA0039.2	MA0039.2	0.0593
MA0040.1	MA0040.1	0.404
MA0041.1	MA0041.1	0.858
MA0042.1	MA0042.1	0.178
MA0043.1	MA0043.1	0.00853
MA0046.1	MA0046.1	0.451
MA0047.2	MA0047.2	0.308
MA0048.1	MA0048.1	0.0585
MA0050.1	MA0050.1	0.395
MA0051.1	MA0051.1	0.398
MA0052.1	MA0052.1	0.117
MA0055.1	MA0055.1	4.42051e-5
MA0057.1	MA0057.1	0.785
MA0058.1	MA0058.1	6.55581e-5
MA0059.1	MA0059.1	0.005
MA0060.1	MA0060.1	2.47092e-6
MA0061.1	MA0061.1	0.273
MA0062.2	MA0062.2	6.01663e-4
MA0065.2	MA0065.2	0.0272
MA0066.1	MA0066.1	0.38
MA0067.1	MA0067.1	0.811
MA0068.1	MA0068.1	0.00485
MA0069.1	MA0069.1	0.0887
MA0070.1	MA0070.1	0.901
MA0071.1	MA0071.1	0.172
MA0072.1	MA0072.1	0.478
MA0073.1	MA0073.1	0.954
MA0074.1	MA0074.1	0.536
MA0076.1	MA0076.1	3.91529e-5
MA0077.1	MA0077.1	0.539
MA0078.1	MA0078.1	0.785
MA0079.2	MA0079.2	0.0535
MA0080.2	MA0080.2	4.31208e-13
MA0081.1	MA0081.1	0.183
MA0083.1	MA0083.1	0.726
MA0084.1	MA0084.1	0.835
MA0087.1	MA0087.1	0.487
MA0088.1	MA0088.1	2.7764e-4
MA0090.1	MA0090.1	1.90369e-4
MA0091.1	MA0091.1	0.206
MA0092.1	MA0092.1	0.648
MA0093.1	MA0093.1	1.78112e-4
MA0099.2	MA0099.2	0.0832
MA0100.1	MA0100.1	0.438
MA0101.1	MA0101.1	0.999
MA0102.2	MA0102.2	0.0236
MA0103.1	MA0103.1	0.354
MA0104.2	MA0104.2	0.00602
MA0105.1	MA0105.1	0.674
MA0106.1	MA0106.1	0.012
MA0107.1	MA0107.1	0.357
MA0108.2	MA0108.2	0.0593
MA0111.1	MA0111.1	0.988
MA0112.2	MA0112.2	0.00365
MA0113.1	MA0113.1	0.579
MA0114.1	MA0114.1	0.0681
MA0115.1	MA0115.1	0.131
MA0116.1	MA0116.1	0.364
MA0117.1	MA0117.1	0.811
MA0119.1	MA0119.1	0.135
MA0122.1	MA0122.1	0.513
MA0124.1	MA0124.1	0.384
MA0125.1	MA0125.1	0.703
MA0131.1	MA0131.1	0.657
MA0135.1	MA0135.1	0.14
MA0136.1	MA0136.1	8.09848e-8
MA0137.2	MA0137.2	0.0281
MA0138.2	MA0138.2	0.799
MA0139.1	MA0139.1	0.399
MA0140.1	MA0140.1	0.143
MA0141.1	MA0141.1	0.0301
MA0142.1	MA0142.1	0.199
MA0143.1	MA0143.1	0.0956
MA0144.1	MA0144.1	0.154
MA0145.1	MA0145.1	0.773
MA0146.1	MA0146.1	0.0606
MA0147.1	MA0147.1	0.0061
MA0148.1	MA0148.1	0.381
MA0149.1	MA0149.1	0.0122
MA0150.1	MA0150.1	4.64661e-4
MA0152.1	MA0152.1	0.862
MA0153.1	MA0153.1	0.859
MA0154.1	MA0154.1	0.59
MA0155.1	MA0155.1	0.469
MA0156.1	MA0156.1	0.00197
MA0157.1	MA0157.1	0.00397
MA0159.1	MA0159.1	0.0878
MA0160.1	MA0160.1	0.186
MA0162.1	MA0162.1	0.0532
MA0163.1	MA0163.1	0.193
MA0164.1	MA0164.1	0.447
MA0258.1	MA0258.1	0.0133
MA0259.1	MA0259.1	0.121

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13074

Novel motif	Logo	P-value
1	1	0.0121
10	10	0.123
100	100	0.00395
101	101	0.857
102	102	0.344
103	103	0.134
104	104	0.738
105	105	0.428
106	106	0.00646
107	107	0.361
108	108	0.843
109	109	0.019
11	11	0.577
110	110	0.174
111	111	0.261
112	112	0.941
113	113	0.11
114	114	0.778
115	115	0.99
116	116	0.538
117	117	0.254
118	118	0.0359
119	119	0.185
12	12	0.874
120	120	0.298
121	121	0.833
122	122	0.69
123	123	0.328
124	124	0.547
125	125	0.803
126	126	0.27
127	127	0.868
128	128	0.00394
129	129	0.712
13	13	2.41803e-4
130	130	0.636
131	131	0.403
132	132	0.368
133	133	0.272
134	134	0.636
135	135	0.307
136	136	0.00633
137	137	0.111
138	138	0.776
139	139	0.978
14	14	0.463
140	140	0.627
141	141	0.497
142	142	0.512
143	143	0.224
144	144	0.374
145	145	0.114
146	146	0.676
147	147	0.477
148	148	0.379
149	149	0.955
15	15	0.21
150	150	0.833
151	151	0.808
152	152	0.988
153	153	0.61
154	154	0.166
155	155	0.711
156	156	0.144
157	157	0.384
158	158	0.571
159	159	0.805
16	16	0.781
160	160	0.428
161	161	0.189
162	162	0.544
163	163	0.753
164	164	0.0318
165	165	0.575
166	166	0.48
167	167	0.406
168	168	0.132
169	169	0.0102
17	17	0.707
18	18	0.391
19	19	0.75
2	2	0.252
20	20	0.327
21	21	0.181
22	22	0.546
23	23	0.0386
24	24	0.279
25	25	0.779
26	26	0.772
27	27	0.938
28	28	0.868
29	29	0.0361
3	3	0.744
30	30	0.281
31	31	0.886
32	32	0.524
33	33	0.226
34	34	0.586
35	35	0.596
36	36	0.046
37	37	0.0915
38	38	0.805
39	39	0.66
4	4	0.826
40	40	9.88734e-4
41	41	0.376
42	42	0.56
43	43	0.965
44	44	0.211
45	45	0.583
46	46	0.408
47	47	0.0797
48	48	0.183
49	49	0.899
5	5	0.64
50	50	0.571
51	51	0.813
52	52	0.102
53	53	0.651
54	54	0.797
55	55	0.119
56	56	0.704
57	57	0.0242
58	58	0.302
59	59	0.596
6	6	0.651
60	60	0.0989
61	61	0.0982
62	62	0.55
63	63	0.546
64	64	0.534
65	65	0.452
66	66	0.0172
67	67	0.678
68	68	0.284
69	69	0.37
7	7	0.266
70	70	0.528
71	71	0.0183
72	72	0.392
73	73	0.175
74	74	0.978
75	75	0.0089
76	76	0.827
77	77	0.566
78	78	0.00239
79	79	0.814
8	8	0.0994
80	80	0.196
81	81	0.379
82	82	0.103
83	83	0.74
84	84	0.316
85	85	0.647
86	86	0.787
87	87	0.00467
88	88	0.555
89	89	0.552
9	9	0.323
90	90	0.657
91	91	0.353
92	92	0.0265
93	93	0.722
94	94	0.292
95	95	0.0816
96	96	0.798
97	97	0.624
98	98	0.211
99	99	0.498

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13074

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102424 mesothelioma cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0102424 (mesothelioma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000222 (mesodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr6:10415276..10415341,-!p2@TFAP2A!1.60!46.98!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.52!52.85!TFAP2A;;chr5:172662197..172662216,-!p1@NKX2-5!1.41!24.87!NKX2-5;;chr5:2751762..2751784,-!p1@IRX2!1.40!23.83!IRX2;;chr6:10412392..10412409,-!p4@TFAP2A!1.30!21.42!TFAP2A;;chr7:35293685..35293718,-!p1@TBX20!1.23!15.89!TBX20;;chr20:30433396..30433414,-!p1@FOXS1!1.22!15.54!FOXS1;;chr2:45236540..45236577,-!p1@SIX2!1.17!13.82!SIX2;;chr1:201979703..201979721,+!p2@ELF3!1.07!10.71!ELF3;;chr1:151032860..151032918,+!p1@MLLT11!1.04!119.86!MLLT11;;chr12:80084737..80084763,-!p3@PAWR!1.04!38.00!PAWR;;chr5:134369905..134369972,-!p1@PITX1!1.04!15.54!PITX1;;chr2:237077022..237077038,-!p1@GBX2!1.04!10.02!GBX2;;chr7:101917407..101917443,+!p3@CUX1!1.00!8.98!CUX1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.00!8.98!SEBOX;;chr20:42295745..42295765,+!p1@MYBL2!0.98!141.63!MYBL2;;chr7:101917447..101917479,+!p4@CUX1!0.98!8.64!CUX1;;chr11:31832658..31832681,-!p1@PAX6!0.98!8.64!PAX6;;chr1:180199393..180199426,+!p1@LHX4!0.97!8.29!LHX4;;chr6:126240380..126240430,+!p2@NCOA7!0.96!21.76!NCOA7;;chr20:55204351..55204377,+!p1@TFAP2C!0.96!10.36!TFAP2C;;chr7:1577899..1577943,+!p3@MAFK!0.95!7.94!MAFK;;chr11:12696071..12696086,+!p3@TEAD1!0.94!10.36!TEAD1;;chr11:19262421..19262455,-!p3@E2F8!0.93!7.60!E2F8;;chr5:172662230..172662241,-!p3@NKX2-5!0.92!7.25!NKX2-5;;chr6:10412576..10412599,-!p5@TFAP2A!0.92!7.25!TFAP2A;;chr1:6479968..6479986,-!p1@HES2!0.92!7.25!HES2;;chr9:2158443..2158481,+!p2@SMARCA2!0.90!20.38!SMARCA2;;chr1:151032922..151032951,+!p2@MLLT11!0.90!11.74!MLLT11;;chr7:149470540..149470596,-!p2@ZNF467!0.90!9.33!ZNF467;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.90!6.91!SEBOX;;chr20:42295713..42295738,+!p2@MYBL2!0.88!41.45!MYBL2;;chr12:54332608..54332636,+!p1@HOXC13!0.88!6.56!HOXC13;;chr6:1389789..1389821,+!p1@FOXF2!0.87!8.98!FOXF2;;chr2:185463247..185463263,+!p1@ZNF804A!0.86!11.40!ZNF804A;;chr6:10415484..10415508,-!p3@TFAP2A!0.86!6.22!TFAP2A;;chr7:101917482..101917507,+!p6@CUX1!0.86!6.22!CUX1;;chr7:149470641..149470694,-!p1@ZNF467!0.84!28.67!ZNF467;;chr7:156803329..156803362,-!p1@MNX1!0.84!5.87!MNX1;;chr20:32274179..32274213,-!p1@E2F1!0.80!38.00!E2F1;;chr12:3068544..3068597,+!p1@TEAD4!0.80!34.54!TEAD4;;chr1:935398..935465,-!p2@HES4!0.79!11.40!HES4;;chr7:1577111..1577132,+!p4@MAFK!0.79!5.87!MAFK;;chr5:2751785..2751808,-!p2@IRX2!0.79!5.18!IRX2;;chr17:41277372..41277418,-!p1@BRCA1!0.78!19.69!BRCA1;;chr3:69915385..69915438,+!p3@MITF!0.77!4.84!MITF;;chr19:24097706..24097731,+!p2@ZNF726!0.76!9.67!ZNF726;;chr7:19157043..19157088,-!p2@TWIST1!0.74!12.09!TWIST1;;chr16:67198633..67198671,+!p1@HSF4!0.74!4.49!HSF4;;chr6:20402102..20402152,+!p1@E2F3!0.73!20.03!E2F3;;chr20:31350184..31350200,+!p1@DNMT3B!0.70!8.98!DNMT3B;;chr20:62680984..62680999,-!p1@SOX18!0.70!5.53!SOX18;;chr12:80085061..80085119,-!p6@PAWR!0.69!6.56!PAWR;;chr12:124873852..124873881,-!p3@NCOR2!0.68!26.25!NCOR2;;chr12:3068634..3068656,+!p5@TEAD4!0.68!3.80!TEAD4;;chr13:100623375..100623425,-!p1@ZIC5!0.68!3.80!ZIC5;;chr5:3595977..3595999,+!p1@IRX1!0.68!3.80!IRX1;;chr7:35293665..35293680,-!p2@TBX20!0.68!3.80!TBX20;;chr9:129376201..129376225,+!p1@LMX1B!0.68!3.80!LMX1B;;chr4:4861385..4861398,+!p1@MSX1!0.67!12.09!MSX1;;chr16:1429627..1429662,-!p2@UNKL!0.67!12.09!UNKL;;chr7:19157248..19157268,-!p1@TWIST1!0.67!11.40!TWIST1;;chr8:60031619..60031676,-!p1@TOX!0.67!8.64!TOX;;chr19:35759976..35760042,+!p4@USF2!0.66!21.76!USF2;;chr8:145669791..145669834,-!p1@TONSL!0.66!11.40!TONSL;;chr8:60031682..60031710,-!p2@TOX!0.66!6.22!TOX;;chr14:37131058..37131139,+!p1@PAX9!0.65!3.45!PAX9;;chrY:21906594..21906622,-!p1@KDM5D!0.65!3.45!KDM5D;;chr1:201979743..201979762,+!p1@ELF3!0.65!3.45!ELF3;;chr17:41623692..41623715,-!p1@ETV4!0.64!16.58!ETV4;;chr10:48355030..48355090,+!p1@ZNF488!0.64!4.49!ZNF488;;chr6:126240442..126240459,+!p4@NCOA7!0.64!4.49!NCOA7;;chr4:4291861..4291913,-!p1@LYAR!0.63!89.81!LYAR;;chr3:128206762..128206781,-!p2@GATA2!0.62!23.49!GATA2;;chr15:37392094..37392116,-!p6@MEIS2!0.62!4.15!MEIS2;;chr15:83953397..83953425,-!p1@BNC1!0.62!3.80!BNC1;;chr1:935467..935484,-!p1@HES4!0.61!15.89!HES4;;chr2:172949484..172949522,+!p1@DLX1!0.61!3.11!DLX1;;chr11:31832610..31832639,-!p5@PAX6!0.61!3.11!PAX6;;chr15:67418177..67418204,+!p9@SMAD3!0.61!3.11!SMAD3;;chr17:38501500..38501517,+!p13@RARA!0.61!3.11!RARA;;chr9:126774018..126774055,+!p1@LHX2!0.61!3.11!LHX2;;chr19:1592714..1592762,-!p1@MBD3!0.60!26.94!MBD3;;chr6:126240356..126240379,+!p7@NCOA7!0.60!3.80!NCOA7;;chr17:7590797..7590815,-!p1@TP53!0.59!155.44!TP53;;chr12:2986275..2986363,-!p1@FOXM1!0.59!34.89!FOXM1;;chr6:19837592..19837621,+!p1@ID4!0.59!21.42!ID4;;chr4:4291837..4291859,-!p2@LYAR!0.59!11.05!LYAR;;chr2:121493425..121493474,+!p1@GLI2!0.59!7.25!GLI2;;chr9:99180617..99180658,-!p1@ZNF367!0.59!7.25!ZNF367;;chr1:151032739..151032748,+!p6@MLLT11!0.59!3.80!MLLT11;;chr7:77428149..77428220,+!p1@PHTF2!0.58!34.54!PHTF2;;chr4:8873716..8873738,-!p2@HMX1!0.58!2.76!HMX1;;chr5:134369879..134369898,-!p2@PITX1!0.58!2.76!PITX1;;chr6:10415263..10415274,-!p8@TFAP2A!0.58!2.76!TFAP2A;;chr9:22446814..22446830,+!p4@DMRTA1!0.58!2.76!DMRTA1;;chr11:19262461..19262476,-!p5@E2F8!0.58!2.76!E2F8;;chr2:63277948..63277974,+!p1@OTX1!0.58!2.76!OTX1;;chr16:31076332..31076388,-!p3@ZNF668!0.58!2.76!ZNF668;;chr17:3571863..3571881,-!p1@TAX1BP3!0.57!241.11!TAX1BP3;;chr15:37392724..37392757,-!p1@MEIS2!0.57!15.20!MEIS2;;chr16:54320101..54320125,-!p4@IRX3!0.57!4.15!IRX3;;chr15:67418119..67418162,+!p5@SMAD3!0.57!3.11!SMAD3;;chr6:126240463..126240489,+!p6@NCOA7!0.57!3.11!NCOA7;;chr5:174151553..174151610,+!p1@MSX2!0.56!4.84!MSX2;;chr16:4323015..4323067,-!p2@TFAP4!0.55!8.29!TFAP4;;chr20:50808667..50808729,-!p3@ZFP64!0.55!5.53!ZFP64;;chr8:60031809..60031835,-!p4@TOX!0.55!3.45!TOX;;chr12:80083544..80083558,-!p13@PAWR!0.55!3.45!PAWR;;chr19:54024251..54024305,+!p4@ZNF331!0.54!4.49!ZNF331;;chr2:74730430..74730451,-!p1@LBX2!0.54!4.49!LBX2;;chr12:125002827..125002855,-!p5@NCOR2!0.54!3.80!NCOR2;;chr15:42749722..42749739,-!p2@ZFP106!0.53!4.84!ZFP106;;chr12:80085255..80085284,-!p9@PAWR!0.53!3.80!PAWR;;chr8:60031762..60031803,-!p3@TOX!0.53!3.80!TOX;;chr15:76629123..76629151,+!p1@ISL2!0.53!2.76!ISL2;;chr14:95236440..95236465,-!p1@GSC!0.53!2.42!GSC;;chr16:67198683..67198698,+!p2@HSF4!0.53!2.42!HSF4;;chr17:46132044..46132080,+!p4@NFE2L1!0.53!2.42!NFE2L1;;chr7:19156632..19156652,-!p3@TWIST1!0.53!2.42!TWIST1;;chr2:237076992..237077008,-!p2@GBX2!0.53!2.42!GBX2;;chr2:45236579..45236596,-!p2@SIX2!0.53!2.42!SIX2;;chr3:69915369..69915381,+!p4@MITF!0.53!2.42!MITF;;chr12:3068668..3068689,+!p7@TEAD4!0.53!2.42!TEAD4;;chr19:47523058..47523114,+!p1@NPAS1!0.53!2.42!NPAS1;;chr1:151032957..151032968,+!p7@MLLT11!0.53!2.42!MLLT11;;chr15:66994561..66994597,+!p2@SMAD6!0.52!6.56!SMAD6;;chr1:23857698..23857733,-!p1@E2F2!0.52!4.84!E2F2;;chr11:706938..707008,-!p3@DEAF1!0.52!3.11!DEAF1;;chr8:72756637..72756664,-!p3@MSC!0.52!2.76!MSC;;chr12:2986206..2986258,-!p2@FOXM1!0.51!17.27!FOXM1;;chr19:23433144..23433204,-!p1@ZNF724P!0.51!12.78!ZNF724P;;chr19:37096139..37096170,-!p2@ZNF529!0.51!7.60!ZNF529;;chr2:172967621..172967637,-!p1@DLX2!0.51!7.25!DLX2;;chr1:151032782..151032801,+!p4@MLLT11!0.51!5.18!MLLT11;;chr2:239756671..239756732,+!p1@TWIST2!0.50!8.64!TWIST2;;chr5:176738887..176738934,-!p1@MXD3!0.49!18.31!MXD3;;chrX:101975643..101975683,+!p1@BHLHB9!0.49!5.53!BHLHB9;;chr5:172662303..172662320,-!p2@NKX2-5!0.49!2.07!NKX2-5;;chr3:138665937..138665968,-!p1@FOXL2!0.49!2.07!FOXL2;;chr15:90294062..90294079,-!p2@MESP1!0.49!2.07!MESP1;;chr19:36134528..36134563,+!p1@ETV2!0.48!7.25!ETV2;;chr19:22018938..22018963,-!p3@ZNF43!0.48!5.87!ZNF43;;chr8:86089417..86089440,+!p2@E2F5!0.48!4.84!E2F5;;chr6:28303901..28303944,-!p2@ZNF323!0.48!3.80!ZNF323;;chr16:29818199..29818216,+!p11@MAZ!0.48!3.80!MAZ;;chr1:247171316..247171336,-!p3@ZNF695!0.48!3.45!ZNF695;;chr8:135725369..135725388,-!p3@ZFAT!0.48!3.11!ZFAT;;chr12:69753448..69753577,+!p1@YEATS4!0.47!52.51!YEATS4;;chr11:8102749..8102769,+!p2@TUB!0.47!4.49!TUB;;chr11:19263160..19263176,-!p1@E2F8!0.47!2.42!E2F8;;chr1:23857325..23857416,-!p2@E2F2!0.47!2.42!E2F2;;chr19:33793430..33793447,-!p1@CEBPA!0.46!10.36!CEBPA;;chr19:59084922..59084947,-!p3@MZF1!0.46!5.18!MZF1;;chr19:36545128..36545203,-!p1@THAP8!0.45!11.40!THAP8;;chr1:211433275..211433335,+!p2@RCOR3!0.45!7.25!RCOR3;;chr15:41913690..41913753,+!p2@MGA!0.45!5.53!MGA;;chr12:125002861..125002894,-!p7@NCOR2!0.45!3.11!NCOR2;;chr22:21356345..21356367,-!p3@THAP7!0.45!2.76!THAP7;;chr12:80084303..80084332,-!p1@PAWR!0.44!14.16!PAWR;;chr16:29818160..29818188,+!p6@MAZ!0.44!11.05!MAZ;;chr14:61116183..61116208,-!p1@SIX1!0.44!8.98!SIX1;;chr8:145159277..145159282,+!p7@MAF1!0.44!3.11!MAF1;;chr10:104155659..104155676,+!p4@NFKB2!0.44!2.42!NFKB2;;chr15:67418047..67418093,+!p4@SMAD3!0.44!2.42!SMAD3;;chr15:66994885..66994904,+!p7@SMAD6!0.44!1.73!SMAD6;;chr16:1429010..1429038,-!p5@UNKL!0.44!1.73!UNKL;;chr19:16435423..16435484,+!p5@KLF2!0.44!1.73!KLF2;;chr13:100634004..100634025,+!p2@ZIC2!0.44!1.73!ZIC2;;chr13:37494306..37494324,-!p4@SMAD9!0.44!1.73!SMAD9;;chr6:10412477..10412490,-!p10@TFAP2A!0.44!1.73!TFAP2A;;chr6:1389989..1390019,+!p2@FOXF2!0.44!1.73!FOXF2;;chr8:60031840..60031869,-!p5@TOX!0.44!1.73!TOX;;chrX:66763914..66763933,+!p3@AR!0.44!1.73!AR;;chr2:191906489..191906517,-!p6@STAT4!0.44!1.73!STAT4;;chr2:42721205..42721307,+!p4@MTA3!0.44!1.73!MTA3;;chr3:114343870..114343887,-!p9@ZBTB20!0.44!1.73!ZBTB20;;chr21:38071430..38071456,+!p1@SIM2!0.44!1.73!SIM2;;chr12:7079780..7079791,-!p2@PHB2!0.43!12.09!PHB2;;chr17:47492252..47492265,-!p2@PHB!0.43!9.33!PHB;;chr15:66994663..66994680,+!p1@SMAD6!0.43!5.18!SMAD6;;chr17:35767301..35767344,+!p2@TADA2A!0.43!5.18!TADA2A;;chr19:19729477..19729542,-!p1@PBX4!0.43!4.49!PBX4;;chr3:114343826..114343869,-!p4@ZBTB20!0.43!4.15!ZBTB20;;chr1:247171347..247171366,-!p2@ZNF695!0.43!3.80!ZNF695;;chr19:17356436..17356481,-!p3@NR2F6!0.43!3.45!NR2F6;;chr8:72756667..72756736,-!p2@MSC!0.43!3.11!MSC;;chr12:19592405..19592492,+!p2@AEBP2!0.42!20.03!AEBP2;;chr7:1570388..1570418,+!p2@MAFK!0.42!4.49!MAFK;;chr20:2673383..2673441,+!p1@EBF4!0.42!3.11!EBF4;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3;;chr6:21597687..21597708,+!p14@SOX4!0.13!0.35!SOX4;;chr6:35464729..35464738,-!p3@TEAD3!0.13!0.35!TEAD3;;chr6:45390137..45390148,+!p12@RUNX2!0.13!0.35!RUNX2;;chr6:85474198..85474212,-!p3@TBX18!0.13!0.35!TBX18;;chr7:101460882..101460923,+!p5@CUX1!0.13!0.35!CUX1;;chr7:101917509..101917520,+!p9@CUX1!0.13!0.35!CUX1;;chr7:111846692..111846704,+!p3@ZNF277!0.13!0.35!ZNF277;;chr7:149158187..149158210,-!p2@ZNF777!0.13!0.35!ZNF777;;chr7:150945865..150945896,-!p4@SMARCD3!0.13!0.35!SMARCD3;;chr7:1577076..1577095,+!p5@MAFK!0.13!0.35!MAFK;;chr7:27170042..27170064,-!p4@HOXA4!0.13!0.35!HOXA4;;chr7:27183263..27183284,-!p2@HOXA5!0.13!0.35!HOXA5;;chr7:27183291..27183324,-!p1@HOXA5!0.13!0.35!HOXA5;;chr7:27239740..27239759,-!p2@HOXA13!0.13!0.35!HOXA13;;chr7:4722287..4722294,+!p9@FOXK1!0.13!0.35!FOXK1;;chr7:64363682..64363692,+!p4@ZNF273!0.13!0.35!ZNF273;;chr7:96634850..96634874,+!p3@DLX6!0.13!0.35!DLX6;;chr7:96635329..96635357,+!p9@DLX6!0.13!0.35!DLX6;;chr7:97840743..97840786,+!p1@BHLHA15!0.13!0.35!BHLHA15;;chr7:99680193..99680204,-!p2@ZNF3!0.13!0.35!ZNF3;;chr7:99680302..99680329,-!p5@ZNF3!0.13!0.35!ZNF3;;chr8:102218439..102218455,-!p3@ZNF706!0.13!0.35!ZNF706;;chr8:11561684..11561751,+!p1@GATA4!0.13!0.35!GATA4;;chr8:123793708..123793723,+!p6@ZHX2!0.13!0.35!ZHX2;;chr8:128747729..128747748,+!p14@MYC!0.13!0.35!MYC;;chr8:67525467..67525472,-!p4@MYBL1!0.13!0.35!MYBL1;;chr8:72755987..72756002,-!p7@MSC!0.13!0.35!MSC;;chr8:72756194..72756208,-!p9@MSC!0.13!0.35!MSC;;chr8:72756251..72756262,-!p12@MSC!0.13!0.35!MSC;;chr8:72756522..72756533,-!p13@MSC!0.13!0.35!MSC;;chr8:77593750..77593757,+!p3@ZFHX4!0.13!0.35!ZFHX4;;chr8:81398552..81398563,+!p13@ZBTB10!0.13!0.35!ZBTB10;;chr8:81787006..81787031,-!p2@ZNF704!0.13!0.35!ZNF704;;chr8:86089472..86089483,+!p9@E2F5!0.13!0.35!E2F5;;chr9:124976185..124976212,-!p4@LHX6!0.13!0.35!LHX6;;chr15:31618889..31618902,+!p15@KLF13!0.13!0.35!KLF13;;chr15:57025732..57025743,-!p6@ZNF280D!0.13!0.35!ZNF280D;;chr15:66994718..66994729,+!p4@SMAD6!0.13!0.35!SMAD6;;chr15:67391010..67391046,+!p13@SMAD3!0.13!0.35!SMAD3;;chr15:67459116..67459123,+!p23@SMAD3!0.13!0.35!SMAD3;;chr15:76629064..76629073,+!p3@ISL2!0.13!0.35!ISL2;;chr15:77154812..77154833,-!p5@SCAPER!0.13!0.35!SCAPER;;chr15:83953694..83953708,-!p4@BNC1!0.13!0.35!BNC1;;chr15:96869165..96869183,+!p20@NR2F2!0.13!0.35!NR2F2;;chr16:29819122..29819141,+!p34@MAZ!0.13!0.35!MAZ;;chr16:30538376..30538386,-!p8@ZNF768!0.13!0.35!ZNF768;;chr16:30616396..30616400,-!p4@ZNF689!0.13!0.35!ZNF689;;chr16:3493528..3493539,-!p2@ZNF597!0.13!0.35!ZNF597;;chr16:54320280..54320291,-!p9@IRX3!0.13!0.35!IRX3;;chr16:54320322..54320343,-!p7@IRX3!0.13!0.35!IRX3;;chr16:67881617..67881626,-!p6@CENPT!0.13!0.35!CENPT;;chr16:69419590..69419601,-!p5@TERF2!0.13!0.35!TERF2;;chr16:69681215..69681227,+!p17@NFAT5!0.13!0.35!NFAT5;;chr16:86601052..86601066,+!p4@FOXC2!0.13!0.35!FOXC2;;chr17:26695043..26695050,-!p10@SEBOX!0.13!0.35!SEBOX;;chr17:36871943..36871947,+!p8@MLLT6!0.13!0.35!MLLT6;;chr17:38487239..38487261,+!p12@RARA!0.13!0.35!RARA;;chr17:38487563..38487578,+!p10@RARA!0.13!0.35!RARA;;chr17:41622731..41622764,-!p5@ETV4!0.13!0.35!ETV4;;chr17:41739036..41739040,-!p5@MEOX1!0.13!0.35!MEOX1;;chr17:42295682..42295731,-!p17@UBTF!0.13!0.35!UBTF;;chr17:46687935..46687950,-!p3@HOXB7!0.13!0.35!HOXB7;;chr17:46703478..46703488,-!p9@HOXB9!0.13!0.35!HOXB9;;
+|ffid_belonging_in_development=CL:0000222
 |fonse_cell_line=FF:0102424
 |fonse_cell_line_closure=FF:0102424

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FF:10857-111G2: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:08, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0