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|sample_ethnicity=C
|sample_ethnicity=C
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.92447701001179e-206!GO:0005737;cytoplasm;2.81545172041577e-186!GO:0043226;organelle;2.83705222964602e-157!GO:0043229;intracellular organelle;7.16602681524078e-157!GO:0043231;intracellular membrane-bound organelle;8.39169249023293e-151!GO:0043227;membrane-bound organelle;8.39169249023293e-151!GO:0044444;cytoplasmic part;5.80325634086356e-133!GO:0044422;organelle part;1.89133737242286e-93!GO:0044446;intracellular organelle part;6.37589028783684e-92!GO:0005515;protein binding;7.38591170956105e-89!GO:0032991;macromolecular complex;3.4992631489042e-68!GO:0030529;ribonucleoprotein complex;6.81807949091654e-61!GO:0044238;primary metabolic process;3.54485237992637e-59!GO:0044237;cellular metabolic process;5.01669946184888e-58!GO:0043170;macromolecule metabolic process;5.64458372040204e-54!GO:0003723;RNA binding;2.31033803828203e-53!GO:0005739;mitochondrion;2.31033803828203e-53!GO:0043233;organelle lumen;2.31033803828203e-53!GO:0031974;membrane-enclosed lumen;2.31033803828203e-53!GO:0044428;nuclear part;4.49826581408493e-48!GO:0005634;nucleus;5.56472903028522e-47!GO:0033036;macromolecule localization;1.13975245751571e-46!GO:0015031;protein transport;4.51342136105614e-46!GO:0031090;organelle membrane;5.22530644610551e-46!GO:0045184;establishment of protein localization;1.54469225795982e-43!GO:0008104;protein localization;1.56070803147136e-43!GO:0016043;cellular component organization and biogenesis;3.5528389392863e-39!GO:0019538;protein metabolic process;4.17981135330289e-39!GO:0005840;ribosome;1.40965934511256e-36!GO:0044429;mitochondrial part;2.23217733815447e-36!GO:0006412;translation;4.16574800513617e-34!GO:0043234;protein complex;7.1344085647766e-34!GO:0044260;cellular macromolecule metabolic process;7.49417684440611e-33!GO:0044267;cellular protein metabolic process;2.38213418636818e-32!GO:0006396;RNA processing;9.04659874009179e-32!GO:0031975;envelope;1.63181745701709e-31!GO:0031967;organelle envelope;1.75749082568041e-31!GO:0010467;gene expression;3.12917963403875e-31!GO:0003735;structural constituent of ribosome;7.42268489044869e-31!GO:0046907;intracellular transport;1.05920789042473e-30!GO:0031981;nuclear lumen;2.76541260955172e-30!GO:0016071;mRNA metabolic process;4.72090631003362e-30!GO:0005829;cytosol;5.61659270820539e-30!GO:0006886;intracellular protein transport;4.29986013848254e-29!GO:0008380;RNA splicing;1.22437765171181e-28!GO:0043283;biopolymer metabolic process;2.3714051022461e-27!GO:0009058;biosynthetic process;3.34959756606231e-27!GO:0033279;ribosomal subunit;4.75220127906697e-27!GO:0009059;macromolecule biosynthetic process;3.74248356506916e-26!GO:0065003;macromolecular complex assembly;3.07378707045917e-25!GO:0044249;cellular biosynthetic process;6.24735804027868e-25!GO:0006397;mRNA processing;7.78948554218645e-25!GO:0022607;cellular component assembly;7.59584899029665e-24!GO:0005740;mitochondrial envelope;1.17502748532277e-23!GO:0031966;mitochondrial membrane;5.62628399579804e-23!GO:0019866;organelle inner membrane;1.06295350964083e-21!GO:0005783;endoplasmic reticulum;1.85191943597671e-21!GO:0005681;spliceosome;6.45594635379621e-21!GO:0005743;mitochondrial inner membrane;8.91376013211187e-21!GO:0005654;nucleoplasm;1.04522161389674e-20!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.17604148188774e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.09782334720861e-20!GO:0006119;oxidative phosphorylation;4.6529329398411e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.7332362655832e-19!GO:0051649;establishment of cellular localization;1.14909246454523e-18!GO:0051641;cellular localization;1.4044814149746e-18!GO:0005794;Golgi apparatus;2.33914578258877e-18!GO:0012505;endomembrane system;2.95155958534485e-18!GO:0008134;transcription factor binding;3.94216507836934e-18!GO:0006457;protein folding;8.29161374164409e-18!GO:0044445;cytosolic part;1.80791380252575e-17!GO:0044451;nucleoplasm part;2.70132352001865e-17!GO:0006996;organelle organization and biogenesis;1.18308069828414e-16!GO:0048770;pigment granule;2.80529448087382e-16!GO:0042470;melanosome;2.80529448087382e-16!GO:0016192;vesicle-mediated transport;4.62915636524709e-16!GO:0031980;mitochondrial lumen;7.96120038647085e-16!GO:0005759;mitochondrial matrix;7.96120038647085e-16!GO:0043228;non-membrane-bound organelle;1.03532203550964e-15!GO:0043232;intracellular non-membrane-bound organelle;1.03532203550964e-15!GO:0015935;small ribosomal subunit;1.73753603253213e-15!GO:0044455;mitochondrial membrane part;4.95531142766322e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;9.96592702750401e-15!GO:0044265;cellular macromolecule catabolic process;1.02277342987214e-14!GO:0005746;mitochondrial respiratory chain;1.17180136328486e-14!GO:0000166;nucleotide binding;1.43534596833818e-14!GO:0022618;protein-RNA complex assembly;1.47476849102939e-14!GO:0019941;modification-dependent protein catabolic process;2.11733923996228e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.11733923996228e-14!GO:0006512;ubiquitin cycle;2.15066940185087e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.58214254712402e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.29960794871358e-14!GO:0044257;cellular protein catabolic process;4.6845632766586e-14!GO:0044432;endoplasmic reticulum part;4.92076060640568e-14!GO:0006605;protein targeting;5.85724954218957e-14!GO:0016070;RNA metabolic process;9.25118577001789e-14!GO:0016874;ligase activity;1.51422683614768e-13!GO:0003676;nucleic acid binding;2.22904306411648e-13!GO:0044248;cellular catabolic process;2.6298872682184e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.04018429562233e-13!GO:0003954;NADH dehydrogenase activity;3.04018429562233e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.04018429562233e-13!GO:0048193;Golgi vesicle transport;3.48007662004222e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.99561031251696e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.70912023471816e-13!GO:0016462;pyrophosphatase activity;5.23867975964239e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;6.45327935422497e-13!GO:0015934;large ribosomal subunit;1.16410594809188e-12!GO:0043285;biopolymer catabolic process;2.22133265637167e-12!GO:0051082;unfolded protein binding;2.38331588104002e-12!GO:0017111;nucleoside-triphosphatase activity;3.67114188952175e-12!GO:0003712;transcription cofactor activity;4.15825580047809e-12!GO:0008092;cytoskeletal protein binding;4.94516918691965e-12!GO:0008135;translation factor activity, nucleic acid binding;5.39139242719662e-12!GO:0006461;protein complex assembly;9.86808091657604e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.13300278972549e-11!GO:0009057;macromolecule catabolic process;1.92375914576009e-11!GO:0030163;protein catabolic process;2.12604634239125e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.79165150890639e-11!GO:0045271;respiratory chain complex I;2.79165150890639e-11!GO:0005747;mitochondrial respiratory chain complex I;2.79165150890639e-11!GO:0042775;organelle ATP synthesis coupled electron transport;3.29166662204752e-11!GO:0042773;ATP synthesis coupled electron transport;3.29166662204752e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.04633066334194e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.6390599299944e-11!GO:0016604;nuclear body;1.01416513506054e-10!GO:0005730;nucleolus;1.07624167347014e-10!GO:0051186;cofactor metabolic process;1.48070067113418e-10!GO:0005761;mitochondrial ribosome;1.95493840675378e-10!GO:0000313;organellar ribosome;1.95493840675378e-10!GO:0050794;regulation of cellular process;3.6343794014155e-10!GO:0005773;vacuole;3.9963802530467e-10!GO:0008565;protein transporter activity;4.98522839384751e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.97742727455605e-10!GO:0006366;transcription from RNA polymerase II promoter;6.40580974066369e-10!GO:0043412;biopolymer modification;6.59527359171101e-10!GO:0012501;programmed cell death;6.66329293075677e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.81801119298889e-10!GO:0005789;endoplasmic reticulum membrane;6.90469993296847e-10!GO:0006915;apoptosis;7.78627962650401e-10!GO:0016564;transcription repressor activity;8.76413898515139e-10!GO:0005793;ER-Golgi intermediate compartment;9.31948254698581e-10!GO:0006913;nucleocytoplasmic transport;9.70445321959114e-10!GO:0050789;regulation of biological process;1.08837446957416e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.17422570620828e-09!GO:0000375;RNA splicing, via transesterification reactions;1.17422570620828e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.17422570620828e-09!GO:0031982;vesicle;1.44207782801596e-09!GO:0017076;purine nucleotide binding;1.55187823298948e-09!GO:0016607;nuclear speck;1.69862355987541e-09!GO:0051169;nuclear transport;2.08788269372042e-09!GO:0048523;negative regulation of cellular process;2.08788269372042e-09!GO:0003743;translation initiation factor activity;2.10571973966999e-09!GO:0006446;regulation of translational initiation;2.1759323667698e-09!GO:0005768;endosome;2.60376818964832e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.83077052028653e-09!GO:0008219;cell death;2.9491867366627e-09!GO:0016265;death;2.9491867366627e-09!GO:0031410;cytoplasmic vesicle;2.97658333495834e-09!GO:0006464;protein modification process;3.03781412852038e-09!GO:0006413;translational initiation;3.21983541161319e-09!GO:0030036;actin cytoskeleton organization and biogenesis;3.3748505760502e-09!GO:0005635;nuclear envelope;6.15547738980816e-09!GO:0000323;lytic vacuole;6.36042312331361e-09!GO:0005764;lysosome;6.36042312331361e-09!GO:0031965;nuclear membrane;6.97337515984557e-09!GO:0032553;ribonucleotide binding;7.08932997807606e-09!GO:0032555;purine ribonucleotide binding;7.08932997807606e-09!GO:0031988;membrane-bound vesicle;8.87874203965295e-09!GO:0016023;cytoplasmic membrane-bound vesicle;1.63989584270052e-08!GO:0008639;small protein conjugating enzyme activity;1.6891962021541e-08!GO:0019829;cation-transporting ATPase activity;2.44988502727714e-08!GO:0043687;post-translational protein modification;2.85745489356839e-08!GO:0009055;electron carrier activity;2.9676523447322e-08!GO:0004842;ubiquitin-protein ligase activity;2.97381915167338e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.31235697440794e-08!GO:0030029;actin filament-based process;5.64939516471732e-08!GO:0009056;catabolic process;5.97930546962427e-08!GO:0006732;coenzyme metabolic process;6.22619351332145e-08!GO:0019787;small conjugating protein ligase activity;6.41847014770415e-08!GO:0017038;protein import;7.50092702032799e-08!GO:0048519;negative regulation of biological process;8.0847181160074e-08!GO:0045333;cellular respiration;8.37141839271121e-08!GO:0044431;Golgi apparatus part;1.26421765481681e-07!GO:0006259;DNA metabolic process;1.54492512962443e-07!GO:0048475;coated membrane;1.58748824876858e-07!GO:0030117;membrane coat;1.58748824876858e-07!GO:0003714;transcription corepressor activity;1.88063234930047e-07!GO:0009060;aerobic respiration;2.3542223244807e-07!GO:0015986;ATP synthesis coupled proton transport;3.36109562966528e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.36109562966528e-07!GO:0051246;regulation of protein metabolic process;4.44566737505055e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.1804143853945e-07!GO:0003779;actin binding;7.40825536666114e-07!GO:0031324;negative regulation of cellular metabolic process;1.21573639663673e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.22742954519802e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.22742954519802e-06!GO:0003924;GTPase activity;1.49840013431585e-06!GO:0065007;biological regulation;1.64021101535609e-06!GO:0044453;nuclear membrane part;1.74085630266273e-06!GO:0030120;vesicle coat;1.76545959539266e-06!GO:0030662;coated vesicle membrane;1.76545959539266e-06!GO:0007264;small GTPase mediated signal transduction;1.80249010095235e-06!GO:0005770;late endosome;2.22592034149715e-06!GO:0016481;negative regulation of transcription;2.28307751397348e-06!GO:0006099;tricarboxylic acid cycle;2.28342294973482e-06!GO:0046356;acetyl-CoA catabolic process;2.28342294973482e-06!GO:0016881;acid-amino acid ligase activity;2.45296659161064e-06!GO:0005525;GTP binding;2.77795851420945e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.21783996384363e-06!GO:0019899;enzyme binding;3.35991645958731e-06!GO:0016887;ATPase activity;3.8643048594419e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.13063549183467e-06!GO:0009144;purine nucleoside triphosphate metabolic process;4.13063549183467e-06!GO:0009892;negative regulation of metabolic process;4.14752717713683e-06!GO:0046034;ATP metabolic process;4.15551032145994e-06!GO:0030554;adenyl nucleotide binding;4.4057521086674e-06!GO:0030133;transport vesicle;5.07892008162044e-06!GO:0042254;ribosome biogenesis and assembly;6.1892624945018e-06!GO:0006163;purine nucleotide metabolic process;6.30583099305294e-06!GO:0009150;purine ribonucleotide metabolic process;6.34926891906124e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.36023707477563e-06!GO:0009199;ribonucleoside triphosphate metabolic process;6.46395598081031e-06!GO:0015629;actin cytoskeleton;6.81401709869257e-06!GO:0009141;nucleoside triphosphate metabolic process;6.84519257765723e-06!GO:0016568;chromatin modification;7.06152254639264e-06!GO:0005788;endoplasmic reticulum lumen;7.43810665705792e-06!GO:0031252;leading edge;7.48954401464118e-06!GO:0051170;nuclear import;7.48954401464118e-06!GO:0009259;ribonucleotide metabolic process;7.57474424761792e-06!GO:0005839;proteasome core complex (sensu Eukaryota);8.52224993834513e-06!GO:0005643;nuclear pore;9.2068620500335e-06!GO:0006084;acetyl-CoA metabolic process;9.31682808405506e-06!GO:0051789;response to protein stimulus;9.31682808405506e-06!GO:0006986;response to unfolded protein;9.31682808405506e-06!GO:0003713;transcription coactivator activity;9.338887274048e-06!GO:0042623;ATPase activity, coupled;9.59570839357433e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.8795845664338e-06!GO:0016044;membrane organization and biogenesis;1.00702172491915e-05!GO:0006606;protein import into nucleus;1.04639816080425e-05!GO:0005524;ATP binding;1.04639816080425e-05!GO:0000139;Golgi membrane;1.21082289478268e-05!GO:0050657;nucleic acid transport;1.21082289478268e-05!GO:0051236;establishment of RNA localization;1.21082289478268e-05!GO:0050658;RNA transport;1.21082289478268e-05!GO:0008654;phospholipid biosynthetic process;1.21082289478268e-05!GO:0006754;ATP biosynthetic process;1.37833342621575e-05!GO:0006753;nucleoside phosphate metabolic process;1.37833342621575e-05!GO:0032559;adenyl ribonucleotide binding;1.42308855369257e-05!GO:0006613;cotranslational protein targeting to membrane;1.57260844616808e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.61391118000841e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.61391118000841e-05!GO:0000151;ubiquitin ligase complex;1.65408481783921e-05!GO:0005798;Golgi-associated vesicle;1.66190170418682e-05!GO:0006403;RNA localization;1.75834670841561e-05!GO:0045259;proton-transporting ATP synthase complex;2.01446005426683e-05!GO:0043069;negative regulation of programmed cell death;2.13492628762747e-05!GO:0009109;coenzyme catabolic process;2.23452948278103e-05!GO:0044440;endosomal part;2.3084966713268e-05!GO:0010008;endosome membrane;2.3084966713268e-05!GO:0043066;negative regulation of apoptosis;2.44201008446602e-05!GO:0065002;intracellular protein transport across a membrane;2.57466610797889e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.59105383976513e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.59105383976513e-05!GO:0032446;protein modification by small protein conjugation;2.75103867913225e-05!GO:0032561;guanyl ribonucleotide binding;2.91780574151645e-05!GO:0019001;guanyl nucleotide binding;2.91780574151645e-05!GO:0000245;spliceosome assembly;3.33596659043711e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.39939049933083e-05!GO:0008361;regulation of cell size;3.68465749229528e-05!GO:0042981;regulation of apoptosis;3.69722658436348e-05!GO:0051187;cofactor catabolic process;3.90826358729374e-05!GO:0016567;protein ubiquitination;3.98062634593689e-05!GO:0030532;small nuclear ribonucleoprotein complex;4.03368562576587e-05!GO:0019222;regulation of metabolic process;4.14550793150788e-05!GO:0016563;transcription activator activity;4.14788586264386e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;4.22780050064974e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.23508027592896e-05!GO:0004812;aminoacyl-tRNA ligase activity;4.23508027592896e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.23508027592896e-05!GO:0016049;cell growth;4.73416613070118e-05!GO:0004298;threonine endopeptidase activity;4.95460980758641e-05!GO:0015980;energy derivation by oxidation of organic compounds;5.11009316499862e-05!GO:0005791;rough endoplasmic reticulum;5.23630404327331e-05!GO:0051188;cofactor biosynthetic process;5.49558811325501e-05!GO:0043067;regulation of programmed cell death;5.53249042845551e-05!GO:0004386;helicase activity;5.66824436336039e-05!GO:0006164;purine nucleotide biosynthetic process;5.68204333954503e-05!GO:0009152;purine ribonucleotide biosynthetic process;5.95748152867709e-05!GO:0006323;DNA packaging;6.68006344948369e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.98879609250814e-05!GO:0008026;ATP-dependent helicase activity;7.01234968270339e-05!GO:0006091;generation of precursor metabolites and energy;7.22053050420429e-05!GO:0030867;rough endoplasmic reticulum membrane;7.72870516216563e-05!GO:0006793;phosphorus metabolic process;8.35840673070091e-05!GO:0006796;phosphate metabolic process;8.35840673070091e-05!GO:0042802;identical protein binding;9.71159819552488e-05!GO:0043038;amino acid activation;9.95463261535336e-05!GO:0006418;tRNA aminoacylation for protein translation;9.95463261535336e-05!GO:0043039;tRNA aminoacylation;9.95463261535336e-05!GO:0005667;transcription factor complex;0.000100894511613547!GO:0009260;ribonucleotide biosynthetic process;0.000102056558255575!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000102468683239794!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000102488502308769!GO:0003724;RNA helicase activity;0.00010701887642935!GO:0006950;response to stress;0.000109032854117272!GO:0006916;anti-apoptosis;0.000111031574120539!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000112140931741132!GO:0051427;hormone receptor binding;0.000123323841514363!GO:0001558;regulation of cell growth;0.000131902499183255!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000136032643466952!GO:0043566;structure-specific DNA binding;0.000144349715363421!GO:0001666;response to hypoxia;0.000146313535193098!GO:0016859;cis-trans isomerase activity;0.000150777776211325!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000161000106964527!GO:0046930;pore complex;0.000164993218162864!GO:0006612;protein targeting to membrane;0.000192556483970539!GO:0051028;mRNA transport;0.000193853431600906!GO:0006399;tRNA metabolic process;0.000220433176916133!GO:0043021;ribonucleoprotein binding;0.000230619952969423!GO:0005741;mitochondrial outer membrane;0.000231646783193353!GO:0019867;outer membrane;0.000244480866972236!GO:0031968;organelle outer membrane;0.000245334216038625!GO:0035257;nuclear hormone receptor binding;0.000246154815857234!GO:0051128;regulation of cellular component organization and biogenesis;0.000249501712678051!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000257395036778423!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000268969800032223!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000287358612155095!GO:0045892;negative regulation of transcription, DNA-dependent;0.000288453259436318!GO:0048471;perinuclear region of cytoplasm;0.000327556923797181!GO:0016491;oxidoreductase activity;0.000329350922475042!GO:0046474;glycerophospholipid biosynthetic process;0.000383091628224777!GO:0016310;phosphorylation;0.000414472780722736!GO:0009108;coenzyme biosynthetic process;0.000414472780722736!GO:0030118;clathrin coat;0.000431455086063175!GO:0005769;early endosome;0.000443238403352563!GO:0007005;mitochondrion organization and biogenesis;0.000465973567732505!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000520941065890921!GO:0033116;ER-Golgi intermediate compartment membrane;0.00052615533904839!GO:0005774;vacuolar membrane;0.000529361194640097!GO:0007265;Ras protein signal transduction;0.000553275796489517!GO:0050662;coenzyme binding;0.000572232082823659!GO:0005905;coated pit;0.000586314553728259!GO:0007243;protein kinase cascade;0.00059150741052034!GO:0006897;endocytosis;0.00060195723835296!GO:0010324;membrane invagination;0.00060195723835296!GO:0019843;rRNA binding;0.000615477664456797!GO:0006752;group transfer coenzyme metabolic process;0.000622519178951335!GO:0045786;negative regulation of progression through cell cycle;0.000748120667247096!GO:0003697;single-stranded DNA binding;0.000777998547297844!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000959113577394728!GO:0006364;rRNA processing;0.000959113577394728!GO:0048522;positive regulation of cellular process;0.000974222562348368!GO:0000314;organellar small ribosomal subunit;0.0010024023011172!GO:0005763;mitochondrial small ribosomal subunit;0.0010024023011172!GO:0016072;rRNA metabolic process;0.00108657646758747!GO:0006979;response to oxidative stress;0.00114468672476046!GO:0043623;cellular protein complex assembly;0.00122326038015338!GO:0046467;membrane lipid biosynthetic process;0.00128707364175457!GO:0009117;nucleotide metabolic process;0.00131827151815928!GO:0008186;RNA-dependent ATPase activity;0.00133114246216938!GO:0051920;peroxiredoxin activity;0.00134322261042807!GO:0007010;cytoskeleton organization and biogenesis;0.00136610141922263!GO:0006650;glycerophospholipid metabolic process;0.00146066706259565!GO:0006402;mRNA catabolic process;0.00151848363424698!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00153855561170036!GO:0045454;cell redox homeostasis;0.00158383514841283!GO:0030119;AP-type membrane coat adaptor complex;0.00163134588984151!GO:0046489;phosphoinositide biosynthetic process;0.0016768008120616!GO:0005762;mitochondrial large ribosomal subunit;0.00186310546339985!GO:0000315;organellar large ribosomal subunit;0.00186310546339985!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00191176369318972!GO:0030027;lamellipodium;0.00191176369318972!GO:0051168;nuclear export;0.00197970440647101!GO:0040008;regulation of growth;0.00222527964368067!GO:0006414;translational elongation;0.00228166190081053!GO:0051276;chromosome organization and biogenesis;0.0023694638073536!GO:0030131;clathrin adaptor complex;0.00238412029314604!GO:0051087;chaperone binding;0.00243719399649446!GO:0031072;heat shock protein binding;0.0025029822036475!GO:0005885;Arp2/3 protein complex;0.00256115115467184!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00256115115467184!GO:0044437;vacuolar part;0.00261482540894202!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00265488421727558!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00265488421727558!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00265488421727558!GO:0003702;RNA polymerase II transcription factor activity;0.00275427050640601!GO:0008154;actin polymerization and/or depolymerization;0.00280103244995992!GO:0016197;endosome transport;0.00326967274774184!GO:0033673;negative regulation of kinase activity;0.00331727672834057!GO:0006469;negative regulation of protein kinase activity;0.00331727672834057!GO:0031323;regulation of cellular metabolic process;0.00335005710053078!GO:0045941;positive regulation of transcription;0.00341794297676434!GO:0048500;signal recognition particle;0.00351564395780391!GO:0006974;response to DNA damage stimulus;0.00354720742314772!GO:0043488;regulation of mRNA stability;0.00354720742314772!GO:0043487;regulation of RNA stability;0.00354720742314772!GO:0004004;ATP-dependent RNA helicase activity;0.00369438344453137!GO:0005765;lysosomal membrane;0.00376287825231721!GO:0003729;mRNA binding;0.00399345350729964!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00428291626298839!GO:0015399;primary active transmembrane transporter activity;0.00428291626298839!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00428463095345091!GO:0006891;intra-Golgi vesicle-mediated transport;0.00428946455224786!GO:0030134;ER to Golgi transport vesicle;0.00431803146852405!GO:0048518;positive regulation of biological process;0.00434147675712746!GO:0031902;late endosome membrane;0.00437885392664333!GO:0051287;NAD binding;0.0044612408096178!GO:0045893;positive regulation of transcription, DNA-dependent;0.004465598917589!GO:0004576;oligosaccharyl transferase activity;0.00464725880746709!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00488100951082383!GO:0003690;double-stranded DNA binding;0.00491993118359961!GO:0022890;inorganic cation transmembrane transporter activity;0.00493278049425634!GO:0030658;transport vesicle membrane;0.0049372295725346!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00496059108284856!GO:0030041;actin filament polymerization;0.00544727663677543!GO:0031628;opioid receptor binding;0.00562751156807132!GO:0031852;mu-type opioid receptor binding;0.00562751156807132!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00564210261889324!GO:0008250;oligosaccharyl transferase complex;0.00580955494183195!GO:0030518;steroid hormone receptor signaling pathway;0.00581818104865849!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0059976599817745!GO:0006818;hydrogen transport;0.00628826499087006!GO:0015992;proton transport;0.00636822330471849!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00668290597655169!GO:0006401;RNA catabolic process;0.0066876517210305!GO:0000096;sulfur amino acid metabolic process;0.00703705158938795!GO:0046983;protein dimerization activity;0.00718635424712459!GO:0001726;ruffle;0.0071881767555683!GO:0030663;COPI coated vesicle membrane;0.00720542167441289!GO:0030126;COPI vesicle coat;0.00720542167441289!GO:0004447;iodide peroxidase activity;0.00720542167441289!GO:0051252;regulation of RNA metabolic process;0.00745989964258617!GO:0030384;phosphoinositide metabolic process;0.00757318616720639!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00762996573958579!GO:0033043;regulation of organelle organization and biogenesis;0.00762996573958579!GO:0035258;steroid hormone receptor binding;0.00777192083159209!GO:0048487;beta-tubulin binding;0.00806827985324801!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0085167285675771!GO:0045047;protein targeting to ER;0.0085167285675771!GO:0050811;GABA receptor binding;0.0085167285675771!GO:0030132;clathrin coat of coated pit;0.00880009141027689!GO:0030521;androgen receptor signaling pathway;0.00885513570828771!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00888796724724557!GO:0008286;insulin receptor signaling pathway;0.00891091004608105!GO:0043681;protein import into mitochondrion;0.00907365915418774!GO:0051348;negative regulation of transferase activity;0.00907365915418774!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00912119113020826!GO:0015002;heme-copper terminal oxidase activity;0.00912119113020826!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00912119113020826!GO:0004129;cytochrome-c oxidase activity;0.00912119113020826!GO:0030127;COPII vesicle coat;0.00981256096499892!GO:0012507;ER to Golgi transport vesicle membrane;0.00981256096499892!GO:0005048;signal sequence binding;0.00985339360418826!GO:0016740;transferase activity;0.00992081678847906!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0100740794777575!GO:0010468;regulation of gene expression;0.0102617118267851!GO:0045045;secretory pathway;0.0108809183693971!GO:0006350;transcription;0.0109999817614589!GO:0005083;small GTPase regulator activity;0.0111098814165312!GO:0005869;dynactin complex;0.011430875975584!GO:0030660;Golgi-associated vesicle membrane;0.011478516455892!GO:0032594;protein transport within lipid bilayer;0.011478516455892!GO:0032907;transforming growth factor-beta3 production;0.011478516455892!GO:0032596;protein transport into lipid raft;0.011478516455892!GO:0032910;regulation of transforming growth factor-beta3 production;0.011478516455892!GO:0032595;B cell receptor transport within lipid bilayer;0.011478516455892!GO:0033606;chemokine receptor transport within lipid bilayer;0.011478516455892!GO:0032600;chemokine receptor transport out of lipid raft;0.011478516455892!GO:0032599;protein transport out of lipid raft;0.011478516455892!GO:0032597;B cell receptor transport into lipid raft;0.011478516455892!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.011478516455892!GO:0006643;membrane lipid metabolic process;0.0117242047471563!GO:0065004;protein-DNA complex assembly;0.0120297168238958!GO:0016779;nucleotidyltransferase activity;0.0123496319543525!GO:0008312;7S RNA binding;0.0126750348831339!GO:0017022;myosin binding;0.0133299292102175!GO:0043492;ATPase activity, coupled to movement of substances;0.0134055089931348!GO:0030832;regulation of actin filament length;0.0137368512689324!GO:0008307;structural constituent of muscle;0.0138578938528295!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.014259704773365!GO:0030137;COPI-coated vesicle;0.0143271583926777!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0143504389469552!GO:0016408;C-acyltransferase activity;0.0144753441551566!GO:0032535;regulation of cellular component size;0.0147990035874115!GO:0051540;metal cluster binding;0.0150421233575883!GO:0051536;iron-sulfur cluster binding;0.0150421233575883!GO:0016853;isomerase activity;0.0154640317712938!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0157422196882188!GO:0048037;cofactor binding;0.0158638535133045!GO:0000059;protein import into nucleus, docking;0.0159056769943791!GO:0007049;cell cycle;0.0159643196583464!GO:0006984;ER-nuclear signaling pathway;0.0160820164493058!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0161316877681764!GO:0051726;regulation of cell cycle;0.0161448117652425!GO:0008430;selenium binding;0.0162981912705939!GO:0030984;kininogen binding;0.0169486019259775!GO:0004213;cathepsin B activity;0.0169486019259775!GO:0017166;vinculin binding;0.017187511585892!GO:0019904;protein domain specific binding;0.0174444697586225!GO:0003746;translation elongation factor activity;0.0176385997008976!GO:0006892;post-Golgi vesicle-mediated transport;0.0177626901319823!GO:0006376;mRNA splice site selection;0.0185730149828759!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0185730149828759!GO:0030659;cytoplasmic vesicle membrane;0.0189311176762271!GO:0009966;regulation of signal transduction;0.019386150153088!GO:0009719;response to endogenous stimulus;0.019386150153088!GO:0000074;regulation of progression through cell cycle;0.0194571254166041!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0196383387225069!GO:0006281;DNA repair;0.0198470685070085!GO:0006509;membrane protein ectodomain proteolysis;0.0204316462740978!GO:0033619;membrane protein proteolysis;0.0204316462740978!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0206156246196402!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0206156246196402!GO:0006839;mitochondrial transport;0.0206988013483496!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0210679145698527!GO:0030880;RNA polymerase complex;0.0214289568083509!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0215729818203405!GO:0046870;cadmium ion binding;0.0216922440819599!GO:0004185;serine carboxypeptidase activity;0.0217091233441156!GO:0006506;GPI anchor biosynthetic process;0.0218628581405153!GO:0030522;intracellular receptor-mediated signaling pathway;0.0218705575475307!GO:0030100;regulation of endocytosis;0.021882781403272!GO:0043022;ribosome binding;0.0223899638967898!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0236125123035127!GO:0007242;intracellular signaling cascade;0.0240117375376185!GO:0006635;fatty acid beta-oxidation;0.0242308966960537!GO:0035035;histone acetyltransferase binding;0.0242308966960537!GO:0007266;Rho protein signal transduction;0.0248214941836126!GO:0005912;adherens junction;0.0250749986571973!GO:0006590;thyroid hormone generation;0.0254669221109194!GO:0001725;stress fiber;0.0255251427659263!GO:0032432;actin filament bundle;0.0255251427659263!GO:0006383;transcription from RNA polymerase III promoter;0.0257698982677527!GO:0006611;protein export from nucleus;0.0258438014631183!GO:0006352;transcription initiation;0.0260662297449525!GO:0042158;lipoprotein biosynthetic process;0.0263068422129887!GO:0006497;protein amino acid lipidation;0.0268022128238635!GO:0005862;muscle thin filament tropomyosin;0.0268073212164189!GO:0006607;NLS-bearing substrate import into nucleus;0.0271165265814946!GO:0065009;regulation of a molecular function;0.0274215079072365!GO:0005832;chaperonin-containing T-complex;0.0283636691146119!GO:0008139;nuclear localization sequence binding;0.0290023665988033!GO:0006417;regulation of translation;0.0298575760982231!GO:0051539;4 iron, 4 sulfur cluster binding;0.0300701434836435!GO:0030176;integral to endoplasmic reticulum membrane;0.0302672902260104!GO:0006338;chromatin remodeling;0.0303460159388559!GO:0006505;GPI anchor metabolic process;0.0304749912089344!GO:0012506;vesicle membrane;0.0311573844699207!GO:0008287;protein serine/threonine phosphatase complex;0.0311881158562304!GO:0008097;5S rRNA binding;0.0328104022674158!GO:0006333;chromatin assembly or disassembly;0.0328697553365141!GO:0051101;regulation of DNA binding;0.0329090419765112!GO:0003899;DNA-directed RNA polymerase activity;0.0337297562195754!GO:0032940;secretion by cell;0.0338648079061678!GO:0048468;cell development;0.0341733068161778!GO:0003711;transcription elongation regulator activity;0.0353145021791308!GO:0050681;androgen receptor binding;0.0353145021791308!GO:0009081;branched chain family amino acid metabolic process;0.0355234112253918!GO:0008047;enzyme activator activity;0.036269116951767!GO:0008610;lipid biosynthetic process;0.0368245794857788!GO:0006026;aminoglycan catabolic process;0.0370663604547207!GO:0006027;glycosaminoglycan catabolic process;0.0370663604547207!GO:0007030;Golgi organization and biogenesis;0.0371017102793539!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0374043890751248!GO:0031032;actomyosin structure organization and biogenesis;0.0386784422614604!GO:0005684;U2-dependent spliceosome;0.0389059296880151!GO:0008270;zinc ion binding;0.0389059296880151!GO:0051452;cellular pH reduction;0.0389059296880151!GO:0051453;regulation of cellular pH;0.0389059296880151!GO:0045851;pH reduction;0.0389059296880151!GO:0044449;contractile fiber part;0.0396526741687011!GO:0018196;peptidyl-asparagine modification;0.0398905314902528!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0398905314902528!GO:0007033;vacuole organization and biogenesis;0.0399820276360503!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0399820276360503!GO:0000428;DNA-directed RNA polymerase complex;0.0399820276360503!GO:0007040;lysosome organization and biogenesis;0.0401970140799539!GO:0016363;nuclear matrix;0.0409018638648652!GO:0000097;sulfur amino acid biosynthetic process;0.041373896276656!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0414287086535757!GO:0004784;superoxide dismutase activity;0.0414287086535757!GO:0030125;clathrin vesicle coat;0.0414287086535757!GO:0030665;clathrin coated vesicle membrane;0.0414287086535757!GO:0044433;cytoplasmic vesicle part;0.041467466663756!GO:0051098;regulation of binding;0.0414907412955395!GO:0006644;phospholipid metabolic process;0.0417724834605007!GO:0032984;macromolecular complex disassembly;0.0417871619158251!GO:0005865;striated muscle thin filament;0.0425231140436511!GO:0009967;positive regulation of signal transduction;0.0427330696604765!GO:0043407;negative regulation of MAP kinase activity;0.0433440867769507!GO:0016584;nucleosome positioning;0.0436503144039832!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0440159203557037!GO:0007006;mitochondrial membrane organization and biogenesis;0.0442436633441665!GO:0044262;cellular carbohydrate metabolic process;0.0447497041472766!GO:0003756;protein disulfide isomerase activity;0.0450565302132675!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0450565302132675!GO:0042026;protein refolding;0.0454141922218403!GO:0005784;translocon complex;0.0456632259279573!GO:0046914;transition metal ion binding;0.0460223060484448!GO:0006672;ceramide metabolic process;0.0460296530493511!GO:0030016;myofibril;0.0462538029826677!GO:0005099;Ras GTPase activator activity;0.0462538029826677!GO:0051235;maintenance of localization;0.046441110947703!GO:0030695;GTPase regulator activity;0.0465650555385237!GO:0006595;polyamine metabolic process;0.0466027455360606!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0473776762363958!GO:0031529;ruffle organization and biogenesis;0.0477296017710218!GO:0017169;CDP-alcohol phosphatidyltransferase activity;0.0486867591784203!GO:0030911;TPR domain binding;0.0489140093630191!GO:0000049;tRNA binding;0.0492052255230715!GO:0030968;unfolded protein response;0.0498777022389599
|sample_id=10028
|sample_id=10028
|sample_note=
|sample_note=

Revision as of 21:34, 25 June 2012


Name:thyroid, adult, pool1
Species:Human (Homo sapiens)
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Genomic View: UCSC
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissuethyroid
dev stage67,68,78 years old adult
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyAmbion
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number0910061 -19
catalog numberCat:AM6000 Lot:0910061 -19
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
Download raw sequence, BAM & CTSS
Hg19
BAMCTSS
[{{{hg19bam}}} download][{{{hg19ctss}}} donwload]
Hg38
BAMCTSS
[{{{hg38bam}}} download][{{{hg38ctss}}} donwload]


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.119
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.394
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.0268
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0.727
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
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C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data no result for this sample


TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10634

Jaspar motifP-value
MA0002.20.00522
MA0003.10.56
MA0004.10.365
MA0006.10.362
MA0007.10.76
MA0009.10.462
MA0014.10.38
MA0017.10.733
MA0018.20.603
MA0019.10.0312
MA0024.10.168
MA0025.10.912
MA0027.10.565
MA0028.10.281
MA0029.10.38
MA0030.12.03097e-4
MA0031.10.00398
MA0035.20.447
MA0038.10.532
MA0039.20.313
MA0040.10.78
MA0041.10.0265
MA0042.10.0977
MA0043.10.563
MA0046.10.186
MA0047.20.00164
MA0048.10.0217
MA0050.10.0431
MA0051.10.0173
MA0052.15.85386e-6
MA0055.10.189
MA0057.10.621
MA0058.10.551
MA0059.10.0315
MA0060.10.531
MA0061.10.0024
MA0062.20.0599
MA0065.20.0946
MA0066.10.0763
MA0067.10.0486
MA0068.19.12001e-4
MA0069.10.0922
MA0070.10.699
MA0071.10.567
MA0072.10.734
MA0073.10.893
MA0074.10.595
MA0076.10.464
MA0077.10.425
MA0078.10.0148
MA0079.20.0432
MA0080.20.00874
MA0081.10.291
MA0083.10.694
MA0084.10.548
MA0087.10.411
MA0088.10.06
MA0090.10.0072
MA0091.10.261
MA0092.10.634
MA0093.10.452
MA0099.26.17197e-13
MA0100.10.494
MA0101.10.0298
MA0102.20.513
MA0103.10.065
MA0104.20.00798
MA0105.11.99175e-9
MA0106.10.0498
MA0107.10.0335
MA0108.21.59222e-6
MA0111.10.901
MA0112.20.102
MA0113.10.0316
MA0114.10.279
MA0115.10.202
MA0116.14.98069e-5
MA0117.10.366
MA0119.10.473
MA0122.10.0944
MA0124.10.771
MA0125.10.489
MA0131.10.634
MA0135.10.119
MA0136.10.00707
MA0137.23.8898e-4
MA0138.20.943
MA0139.10.846
MA0140.10.189
MA0141.10.337
MA0142.10.259
MA0143.10.0587
MA0144.10.191
MA0145.10.182
MA0146.10.219
MA0147.10.00103
MA0148.10.00128
MA0149.10.081
MA0150.10.00165
MA0152.10.429
MA0153.10.0257
MA0154.10.037
MA0155.10.852
MA0156.10.0263
MA0157.10.0724
MA0159.10.611
MA0160.10.42
MA0162.10.46
MA0163.11.1513e-12
MA0164.10.141
MA0258.10.0288
MA0259.10.0557



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10634

Novel motifP-value
10.111
100.00773
1000.21
1010.619
1020.486
1030.168
1040.318
1050.372
1060.231
1070.944
1080.773
1090.139
110.0308
1100.0744
1110.0184
1120.915
1130.543
1140.0185
1150.934
1160.526
1170.0425
1180.148
1190.14
120.539
1200.0351
1210.91
1220.26
1230.00971
1240.934
1250.28
1260.352
1270.572
1280.274
1290.514
130.232
1300.231
1310.408
1320.0998
1330.225
1340.46
1350.792
1360.708
1370.221
1380.433
1390.288
140.962
1400.62
1410.752
1420.601
1430.00644
1440.702
1450.496
1460.781
1470.805
1480.0092
1490.624
150.142
1500.439
1510.523
1520.164
1530.527
1540.196
1550.199
1560.113
1570.896
1580.258
1590.809
160.104
1600.68
1610.265
1620.931
1630.114
1640.256
1650.898
1660.502
1670.118
1680.83
1690.38
170.184
180.00671
190.929
20.509
200.282
210.497
220.971
230.619
240.697
250.621
260.013
270.832
280.79
290.0416
30.111
300.0328
310.712
320.0163
330.601
340.67
350.268
360.0071
370.239
380.753
390.322
40.259
400.167
410.134
420.219
430.117
440.681
450.376
460.0326
470.041
480.11
490.0324
50.528
500.645
510.566
520.664
530.482
540.557
550.682
560.746
570.124
580.685
590.948
60.482
600.763
610.184
620.268
630.663
640.191
650.504
660.106
670.816
680.606
690.722
70.688
700.0637
710.0199
720.92
730.508
740.278
750.0315
760.0531
770.535
780.248
790.249
80.0411
800.354
810.0502
820.369
830.41
840.428
850.461
860.498
870.408
880.798
890.856
90.857
900.0978
910.933
920.639
930.672
940.0741
950.227
960.395
970.454
980.628
990.563



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10634


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000922 (embryo)
0002046 (thyroid gland)
0000483 (epithelium)
0002530 (gland)
0000479 (tissue)
0001007 (digestive system)
0002368 (endocrine gland)
0000062 (organ)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005911 (endo-epithelium)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0003929 (gut epithelium)
0001048 (primordium)
0000925 (endoderm)
0006598 (presumptive structure)
0004117 (pharyngeal pouch)
0002532 (epiblast (generic))
0001555 (digestive tract)
0007026 (primitive gut)
0000949 (endocrine system)
0008814 (pharyngeal arch system)
0009722 (entire pharyngeal arch endoderm)
0006595 (presumptive endoderm)
0007689 (thyroid diverticulum)
0007123 (pharyngeal pouch 2)
0007690 (early pharyngeal endoderm)
0003091 (thyroid primordium)

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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